SPO11 (SPO11 initiator of meiotic double stranded breaks)

symbol:
SPO11
locus group:
protein-coding gene
location:
20q13.31
gene_family:
alias symbol:
CT35|SPATA43|TOPVIA|TOPOVIA
alias name:
cancer/testis antigen 35|spermatog…
entrez id:
23626
ensembl gene id:
ENSG00000054796
ucsc gene id:
uc002xye.4
refseq accession:
NM_012444
hgnc_id:
HGNC:11250
approved reserved:
1999-12-02
20q13.31

SPO11是一种关键的基因,编码一种拓扑异构酶样蛋白(topoisomerase-like protein),主要参与减数分裂(meiosis)过程中DNA双链断裂(double-strand breaks, DSBs)的起始,这是同源染色体重组(homologous recombination)的必要步骤。其表达产物SPO11蛋白通过切割DNA双链,引发重组修复机制,确保遗传多样性并维持基因组稳定性。SPO11的作用位点集中在减数分裂前期I的染色体上,特别是在重组热点区域(recombination hotspots)。若SPO11发生功能丧失突变(loss-of-function mutation),会导致减数分裂异常,表现为染色体无法正确配对和分离,最终引发不育(sterility)。此外,SPO11异常可能与某些癌症相关,因为其功能紊乱可能影响基因组稳定性。SPO11属于SPO11基因家族,该家族成员在真核生物中保守存在,均具有诱导DNA断裂的能力,并参与减数分裂或DNA修复过程。当SPO11过表达时,可能导致过多的DNA损伤,增加基因组不稳定性风险;而降低表达则可能阻碍减数分裂进程,影响生殖细胞发育。SPO11的功能与其他减数分裂相关基因(如DMC1、RAD51)紧密关联,其表达异常可能干扰这些基因的协同作用,进一步破坏减数分裂的准确性。

ChineseEnglish

Meiotic recombination and chromosome segregation require the formation of double-strand breaks (DSBs) in paired chromosome homologs. During meiosis in yeast, a meiotic recombination protein is covalently-linked to the 5' end of DSBs and is essential for the formation of DSBs. The protein encoded by this gene is similar in sequence and conserved features to the yeast meiotic recombination protein. The encoded protein belongs to the TOP6A protein family. Several transcript variants encoding different isoforms have been found for this gene, but the full-length nature of only two of them have been described. [provided by RefSeq, Jul 2008]

Nucleotide sequence of SPO11:[NCBI]
Loading Gene Browser...
Protein Sequence
1MAFAPMGPEA SFFDVLDRHR ESLLAALRRG GREPPTGGSR
41LASSSEVLAS IENIIQDIIT SLARNEAPAF TIDNRSSWEN
81 IKFEDSVGL QMVSHCTTRK IKSDSPKSAQ KFSLILKILS
121MIYKLVQSNT YATKRDIYYT DSQLFGNQTV VDNIINDISC
161M LKVSRRSL HILSTSKGLI AGNLRYIEED GTKVNCTCGA
201TAVAVPSNIQ GIRNLVTDAK FVLIVEKDAT FQRLLDDNFC
241NK LSPCIMI TGKGVPDLNT RLLVKKLWDT FHVPVFTLVD
281ADPHGIEIMC IYKYGSMSMS FEAHHLTVPA IRWLGLLPSD
321LKR LNVPKD SLIPLTKRDQ MKLDSILRRP YVTCQPFWRK
361EMEIMADSKM KAEIQALTFL SSDYLSRVYL PNKLKFGGWI
结构预测来自 AlphaFold DB(UniProt: Q9Y5K1),颜色表示 pLDDT 置信度(深蓝高、黄橙低)。
SNP variants of SPO11:           Showing partial SNPs
rs1467581       rs2236330       rs3736832       rs3764674       rs4810063       rs5842167       rs6014977       rs6014978       rs6025494       rs6064528       rs6064530       rs6064531       rs6070065       rs6070066       rs6070067       rs6070068       rs6092460      

Tissue expression of SPO11:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
TGAAATCCAAGGGAAAGGGA
59
CAGGAACATGAAATGTATCCCA
59
AAGTGAATTGTACCTGTGGTG
59
CAAACTTTGCATCTGTAATCCG
59
TCATGATTACGGGAAAGGGAG
60
CAGGAACATGAAATGTATCCCAC
60
TCATGATTACGGGAAAGGGAG
60
CAGGAACATGAAATGTATCCCAC
60
GGAAGATGGCACCAAAGTG
59
CAAACTTTGCATTCCGAATTCC
60
CTGAAATCCAAGGGAAAGGG
59
AGGAACATGAAATGTATCCCAC
59
CCAAAGTGAATTGTACCTGTG
58
ACTTTGCATCTGTAATCCGA
57
TCATGATTACGGGAAAGGGA
59
CAGGAACATGAAATGTATCCCA
59
TCATGATTACGGGAAAGGGA
59
CAGGAACATGAAATGTATCCCA
59
GGAAGATGGCACCAAAGTG
59
ACTTTGCATTCCGAATTCCT
58
      No data available

Subcellular localization of SPO11 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for SPO11:

GO ID
Protein
Source DB
GO:0000737
H0YCK9 (UniProtKB)
IEA
GO:0003677
H0YCK9 (UniProtKB)
IEA
GO:0005694
H0YCK9 (UniProtKB)
IEA
GO:0000737
Q5TCH6 (UniProtKB)
IEA
GO:0003677
Q5TCH6 (UniProtKB)
IEA
GO:0003824
Q5TCH6 (UniProtKB)
IEA
GO:0005524
Q5TCH6 (UniProtKB)
IEA
GO:0005694
Q5TCH6 (UniProtKB)
IEA
GO:0007131
Q5TCH6 (UniProtKB)
IEA
GO:0000737
Q5TCH7 (UniProtKB)
IEA
GO:0003677
Q5TCH7 (UniProtKB)
IEA
GO:0003824
Q5TCH7 (UniProtKB)
IEA
GO:0005524
Q5TCH7 (UniProtKB)
IEA
GO:0005694
Q5TCH7 (UniProtKB)
IEA
GO:0007131
Q5TCH7 (UniProtKB)
IEA
GO:0000737
Q9Y5K1 (UniProtKB)
IEA
GO:0000781
Q9Y5K1 (UniProtKB)
IEA
GO:0001541
Q9Y5K1 (UniProtKB)
IEA
GO:0003677
Q9Y5K1 (UniProtKB)
IEA
GO:0003918
Q9Y5K1 (UniProtKB)
IEA
GO:0005515
Q9Y5K1 (UniProtKB)
IPI
GO:0005524
Q9Y5K1 (UniProtKB)
IEA
GO:0005634
Q9Y5K1 (UniProtKB)
IEA
GO:0007130
Q9Y5K1 (UniProtKB)
IEA
GO:0007131
Q9Y5K1 (UniProtKB)
IEA
GO:0007141
Q9Y5K1 (UniProtKB)
IEA
GO:0007283
Q9Y5K1 (UniProtKB)
TAS
GO:0007286
Q9Y5K1 (UniProtKB)
IEA
GO:0007292
Q9Y5K1 (UniProtKB)
TAS
GO:0034502
Q9Y5K1 (UniProtKB)
IEA
GO:0045141
Q9Y5K1 (UniProtKB)
IEA
GO:0046872
Q9Y5K1 (UniProtKB)
IEA
GO:0048477
Q9Y5K1 (UniProtKB)
IEA

microRNAs potentially regulating SPO11:     

String
Reactome
Loading…
Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Male infertility 0.002909916 3 1 BeFree_GAD
Azoospermia 0.002638474 2 0 BeFree_GAD
Ovarian Failure, Premature 0.002638474 1 0 BeFree_GAD
Oligospermia 0.002638474 2 0 BeFree_GAD
Tobacco Use Disorder 0.002367032 1 0 GAD
Leukemia, Myelocytic, Acute 0.000271442 1 0 BeFree
MRE11 suppresses germline mutagenesis at meiotic double-strand breaks in mice.
Lukaszewicz A, Wilson TE, Kim S, Keeney S, Jasin M bioRxiv 2026-02-15
The Poly(rC) binding protein 2 is required for spermatogenesis by regulating alternative splicing and mRNA stability.
Xiong Q, Qin Z, Li Y, Yim WY, Wang Z, Tan Z, Tian J, Zhang Y, Cao Y, Zhang Y Int J Biol Macromol IF: 8.7 2026-03-00
Meiosis-specific genes play roles in ploidy reduction in Cryptococcus neoformans titan cells.
Bian Z, Wilhoit K, Liber J, Peer A, Xu Z, Magwene PM, Sun S, Heitman J Proc Natl Acad Sci U S A IF: 9.5 2026-06-02
MRE11 suppresses germline mutagenesis at meiotic double-strand breaks in mice.
Lukaszewicz A, Wilson TE, Kim S, Keeney S, Jasin M Genes Dev IF: 7.4 2026-08-26
Repair and misrepair of telomeric DNA in dynamic interactions with PML nuclear bodies and lamin B1 in doxorubicin-treated cancer cells.
Salmina K, Rumnieks F, Pjanova D, Vainshelbaum NM, Erenpreisa J Nucleus IF: 5.5 2026-12-00
FeM-ID: a biotin labeling-based approach for the dissection of female meiotic chromosome behavior in Arabidopsis thaliana.
Feng C, Wang B, Cuacos M, Lorenz J, Hartmann F, Heckmann S Plant Cell IF: 13.5 2026-02-16
Adaptive Spo11 RNA editing gate optimizes meiosis I pace and mitotic proliferation while preserving ascospore formation.
Wu M, Liu J, Han J, Huang J, Feng C, Jiang C, Xu JR, Wang Q, Liu H Sci Adv IF: 12.5 2026-06-12
Meiotic gene variants contribute to recurrent blastulation failure.
Chen X, Leng L, He W, Li W, Li L, Zhang X, Xu X, Dai J, Gu Y, Xie P, Meng F, Hu H, Jin M, Ma S, Gong F, Lu G, Liu G, Tan Y, Lin G, Zheng W Hum Reprod Open None
Break-induced replication forms long mutable single-strand DNA during meiosis.
Twarowski JM, Kramara J, Seuferer GJ, Renninger KA, Comeron JM, Malkova A Nat Commun IF: 12.124 2026-06-20

Loading comments...

Log in to post comments Log In Sign Up

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com