Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID transcript_name strand transcript_status amino_acid_change ucsc_cons normal_depth normal_vaf tumor_depth tumor_vaf rna_depth rna_vaf polyphen sift condel domain DVL1 1855 genome.wustl.edu 37 1 1274812 1274812 + Silent SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_004421.2 -1 reviewed p.P354 0.150 11 0% 10 40% 32 56.2% - - - superfamily_PDZ CELA2A 63036 genome.wustl.edu 37 1 15788136 15788136 + Silent SNP G G A novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_033440.2 +1 reviewed p.T70 0.647 97 0% 59 11.9% 0 - - - - HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS ARID1A 8289 genome.wustl.edu 37 1 27105553 27105553 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_006015.4 +1 reviewed p.R1722* 1.000 92 0% 110 40.9% 22 31.8% - - - NULL CYP2J2 1573 genome.wustl.edu 37 1 60381745 60381745 + Missense_Mutation SNP T T C novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_000775.2 -1 reviewed p.S80G 0.112 160 0.6% 103 32% 6 50% benign(0.014) deleterious(0) neutral(0.445) HMMPfam_p450,superfamily_Cytochrome_P450 USH2A 7399 genome.wustl.edu 37 1 216166392 216166392 + Missense_Mutation SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_206933.2 -1 reviewed p.V2259I 0.992 216 0% 161 34.8% 0 - benign(0.004) tolerated(1) - HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III AADAC 13 genome.wustl.edu 37 3 151545849 151545849 + Silent SNP G G A novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_001086.2 +1 reviewed p.V363 0.003 59 0% 49 26.5% 1 100% - - - HMMPfam_Abhydrolase_3,superfamily_alpha/beta-Hydrolases PIK3CA 5290 genome.wustl.edu 37 3 178952085 178952085 + Missense_Mutation SNP A A G rs121913279 byCluster TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_006218.2 +1 reviewed p.H1047R 1.000 128 0% 94 36.2% 8 12.5% possibly_damaging(0.926) deleterious(0.03) deleterious(0.739) HMMSmart_PI3Kc,superfamily_Kinase_like INPP4B 8821 genome.wustl.edu 37 4 143130127 143130127 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_001101669.1 -1 reviewed p.R297* 1.000 194 0% 168 10.1% 6 0% - - - NULL IRF2 3660 genome.wustl.edu 37 4 185320124 185320124 + Silent SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 ENST00000505067 -1 known p.G147S 0.812 100 0% 64 26.6% 36 19.4% - - - NULL GRAMD3 65983 genome.wustl.edu 37 5 125822612 125822612 + Missense_Mutation SNP A A G novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_023927.2 +1 validated p.N369S 0.980 125 0% 120 35.8% 26 34.6% benign(0.043) tolerated(0.79) neutral(0.004) NULL ALDH7A1 501 genome.wustl.edu 37 5 125930950 125930950 + Missense_Mutation SNP C C T rs144272515 by1000genomes TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 ENST00000447989 -1 known p.A8T 1.000 7 0.000 9 0.667 0 - benign(0.079) - - NULL PHF15 23338 genome.wustl.edu 37 5 133896438 133896438 + Missense_Mutation SNP A A G novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_015288.4 +1 provisional p.R159G 0.992 79 0% 42 28.6% 4 0% benign(0.281) tolerated(0.43) neutral(0.099) HMMPfam_EPL1 KDM3B 51780 genome.wustl.edu 37 5 137727125 137727125 + Frame_Shift_Del DEL A A - novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_016604.3 +1 validated p.T602fs 1.000 - - - - - - - - - NULL PCDHB6 56130 genome.wustl.edu 37 5 140531021 140531021 + Missense_Mutation SNP G G A novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_018939.2 +1 reviewed p.V395M 0.000 129 0% 137 35% 0 - benign(0) tolerated(0.22) neutral(0.042) HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin SLC36A3 285641 genome.wustl.edu 37 5 150663636 150663636 + Missense_Mutation SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_001145017.1 -1 validated p.A356T 1.000 96 0% 76 36.8% 0 - possibly_damaging(0.674) deleterious(0) deleterious(0.684) HMMPfam_Aa_trans LOC100128588 100128588 genome.wustl.edu 37 6 112647806 112647806 + Missense_Mutation SNP T T G novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 XM_001723020.1 -1 model p.E49A 0.980 19 0% 36 41.7% 0 - - - - HMMPfam_G-patch,HMMSmart_SM00443 ADCY8 114 genome.wustl.edu 37 8 131955704 131955704 + Missense_Mutation SNP G G C novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_001115.2 -1 reviewed p.L416V 1.000 50 0% 30 13.3% 0 - probably_damaging(0.997) deleterious(0) deleterious(0.911) HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase GDA 9615 genome.wustl.edu 37 9 74828843 74828843 + Missense_Mutation SNP G G T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_004293.3 +1 validated p.D172Y 1.000 216 0% 260 35.4% 10 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Amidohydro_1,superfamily_Metallo-dependent hydrolases CELP 1057 genome.wustl.edu 37 9 135962470 135962502 + Splice_Site DEL CCCTCACAAGTGACTCTGAGGCTGCCCCCGTGT CCCTCACAAGTGACTCTGAGGCTGCCCCCGTGT - novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 CCCTCACAAGTGACTCTGAGGCTGCCCCCGTGT CCCTCACAAGTGACTCTGAGGCTGCCCCCGTGT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 ENST00000421286 +1 known NULL 0.034:0.026:0.020:0.015:0.001:0.000:0.000:0.000:0.000:0.000:0.000 - - - - - - - - - - PTEN 5728 genome.wustl.edu 37 10 89692896 89692896 + Missense_Mutation SNP G G T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 ENST00000371953 +1 known p.G127V 1.000 186 0% 191 38.7% 28 46.4% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DSPc,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II PTEN 5728 genome.wustl.edu 37 10 89692935 89692935 + Nonsense_Mutation SNP T T G novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 ENST00000371953 +1 known p.L140* 1.000 135 0% 151 39.7% 31 19.3% - - - HMMPfam_DSPc,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II KRAS 3845 genome.wustl.edu 37 12 25380275 25380275 + Missense_Mutation SNP T T G rs17851045 byCluster TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_033360.2 -1 reviewed p.Q61H 1.000 135 0% 138 72.5% 10 90% benign(0.006) deleterious(0.01) neutral(0.406) HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases ZMYM2 7750 genome.wustl.edu 37 13 20579371 20579372 + Frame_Shift_Ins INS - - T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_003453.2 +1 validated p.T432fs 1.000:1.000 - - - - - - - - - HMMPfam_zf-FCS,HMMSmart_TRASH NFATC4 4776 genome.wustl.edu 37 14 24843125 24843126 + Frame_Shift_Del DEL TG TG - novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 TG TG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 ENST00000424781 +1 known p.C575fs 0.091:0.104 - - - - - - - - - NULL AKAP6 9472 genome.wustl.edu 37 14 33291977 33291977 + Missense_Mutation SNP G G T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_004274.4 +1 reviewed p.S1653I 1.000 67 0% 45 28.9% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL APBA2 321 genome.wustl.edu 37 15 29346180 29346180 + Silent SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_005503.3 +1 reviewed p.S31 0.004 41 0% 23 39.1% 11 63.6% - - - NULL BNC1 646 genome.wustl.edu 37 15 83932868 83932868 + Missense_Mutation SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_001717.3 -1 reviewed p.V379I 1.000 185 0% 185 39.5% 0 - benign(0.366) deleterious(0) deleterious(0.561) PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2 GUCY2D 3000 genome.wustl.edu 37 17 7918688 7918688 + Missense_Mutation SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_000180.3 +1 reviewed p.P938S 1.000 33 0% 25 56% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase KANSL1 284058 genome.wustl.edu 37 17 44248470 44248470 + Missense_Mutation SNP G G A novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_015443.2 -1 validated p.T347I 1.000 97 0% 74 43.2% 7 28.5% probably_damaging(0.999) tolerated(0.12) deleterious(0.751) NULL KAT7 11143 genome.wustl.edu 37 17 47903466 47903466 + Missense_Mutation SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_007067.3 +1 provisional p.R529C 1.000 157 0% 167 31.7% 15 53.3% probably_damaging(0.994) deleterious(0) deleterious(0.897) HMMPfam_MOZ_SAS,superfamily_Acyl-CoA N-acyltransferases (Nat) RNF213 57674 genome.wustl.edu 37 17 78282928 78282928 + Missense_Mutation SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_020954.2 +1 validated p.S871F 0.999 98 0% 90 12.2% 0 - probably_damaging(0.976) deleterious(0) deleterious(0.863) NULL ENSG00000175388 0 genome.wustl.edu 37 18 10773471 10773471 + Silent SNP G G A novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 ENST00000383408 -1 known p.S171 0.535 151 0% 120 10% 0 - - - - NULL WDR83OS 51398 genome.wustl.edu 37 19 12780184 12780184 + Missense_Mutation SNP G G A novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_016145.3 -1 validated p.P12S 1.000 61 0% 36 25% 216 44.9% benign(0) tolerated(0.19) neutral(0.050) HMMPfam_UPF0139 PEG3 5178 genome.wustl.edu 37 19 57328030 57328030 + Missense_Mutation SNP G G A novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_006210.2 -1 reviewed p.R594C 0.008 180 0% 142 39.4% 0 - probably_damaging(0.988) tolerated(0.07) deleterious(0.756) NULL C20orf11 54994 genome.wustl.edu 37 20 61576260 61576260 + Missense_Mutation SNP A A G novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_017896.2 +1 validated p.K228R 1.000 56 0% 70 37.1% 52 26.9% possibly_damaging(0.871) tolerated(0.15) deleterious(0.580) NULL KRTAP21-3 100288323 genome.wustl.edu 37 21 32091035 32091035 + Missense_Mutation SNP C C T novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 ENST00000444335 -1 known p.G15S 0.000 128 0% 108 37% 0 - possibly_damaging(0.848) - - NULL DSCAM 1826 genome.wustl.edu 37 21 41719671 41719671 + Missense_Mutation SNP T T C novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 NM_001389.3 -1 validated p.D379G 1.000 193 0% 168 35.7% 0 - benign(0) deleterious(0.03) neutral(0.364) HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin MIR106A 406899 genome.wustl.edu 37 X 133304300 133304300 + RNA SNP T T G novel TCGA-B5-A0JS-01A-11D-A10B-09 TCGA-B5-A0JS-10A-01D-A10O-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx bb5988e7-9f22-4fcb-bb39-619bf634cd11 33460b7b-2e7c-4a67-892b-d52354cb7f78 ENST00000384870 -1 known NULL 1.000 79 0% 73 35.6% 0 - - - - -