Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error rsID rsID_ref_var_alleles CAF normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumor_var_reads tumor_vaf normal_ref_reads_val normal_var_reads_val normal_vaf_val tumor_ref_reads_val tumor_var_reads_val tumor_vaf_val GOLT1A 0 genome.wustl.edu 37 1 204168258 204168258 + RNA SNP C C T TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 1 204168258 204168258 C T SNP GOLT1A ENST00000475517 human ensembl 74_37 -1 known rna NULL NULL 0.001 0 0 0 no_errors 0 0 0 14 0 0 3 8 72.73 69 0 0.00 43 23 34.85 CD200R1 0 genome.wustl.edu 37 3 112648204 112648204 + Missense_Mutation SNP G G A TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 G G G A G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 3 112648204 112648204 G A SNP CD200R1 ENST00000308611 human ensembl 74_37 -1 known missense c.353 p.T118I 0.127 NULL pfam_CD80_C2-set,pfscan_Ig-like_dom 0 no_errors 0 0 0 43 0 0 16 12 42.86 58 1 1.69 19 15 44.12 SPATA16 0 genome.wustl.edu 37 3 172631487 172631487 + Silent SNP T T C TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 T T T C T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 3 172631487 172631487 T C SNP SPATA16 ENST00000351008 human ensembl 74_37 -1 known silent c.1551 p.R517 0.901 NULL NULL 0 no_errors 0 0 0 125 0 0 65 43 39.81 277 0 0.00 152 91 37.45 ADAMTS16 0 genome.wustl.edu 37 5 5146385 5146385 + Silent SNP C C T TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 5 5146385 5146385 C T SNP ADAMTS16 ENST00000274181 human ensembl 74_37 1 known silent c.318 p.H106 0.018 pfam_Peptidase_M12B_N pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS 0 no_errors 0 0 0 28 0 0 10 7 41.18 126 0 0.00 52 44 45.83 MAP3K7 0 genome.wustl.edu 37 6 91226068 91226068 + RNA SNP A A C TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 A A A C A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 6 91226068 91226068 A C SNP MAP3K7 ENST00000479630 human ensembl 74_37 -1 known rna NULL NULL 0.998 0 0 0 no_errors 0 0 0 42 0 0 13 11 45.83 315 0 0.00 142 153 51.86 GTF2I 0 genome.wustl.edu 37 7 74146970 74146970 + Missense_Mutation SNP T T A TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 T T T A T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 7 74146970 74146970 T A SNP GTF2I ENST00000324896 human ensembl 74_37 1 known missense c.1271 p.L424H 1 pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I 0 no_errors 0 0 0 326 0 0 128 102 44.35 143 0 0.00 84 48 36.36 PDK4 0 genome.wustl.edu 37 7 95223079 95223079 + Silent SNP A A G TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 A A A G A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 7 95223079 95223079 A G SNP PDK4 ENST00000005178 human ensembl 74_37 -1 known silent c.276 p.Y92 1 pfam_BCDHK/PDK_N,superfamily_BCDHK/PDK_N pfam_BCDHK/PDK_N,pfam_HATPase_ATP-bd,superfamily_BCDHK/PDK_N,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pfscan_Sig_transdc_His_kinase_core 0 no_errors 0 0 0 54 0 0 26 5 16.13 267 0 0.00 204 25 10.92 PRKAR2B 0 genome.wustl.edu 37 7 106797706 106797706 + Missense_Mutation SNP G G T TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 G G G T G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 7 106797706 106797706 G T SNP PRKAR2B ENST00000265717 human ensembl 74_37 1 known missense c.1060 p.A354S 1 pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin pfam_cNMP-bd_dom,pfam_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_cNMP-bd-like,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,smart_cAMP_dep_PK_reg_su_I/II_a/b,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin 0 no_errors 0 0 0 49 0 0 19 19 50 288 1 0.35 109 76 40.86 NRG3 0 genome.wustl.edu 37 10 83926565 83926565 + Missense_Mutation SNP C C T TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 10 83926565 83926565 C T SNP NRG3 ENST00000372142 human ensembl 74_37 1 known missense c.143 p.T48M 0.001 NULL pfam_Neuregulin_1_C,pfscan_EG-like_dom 0 no_errors rs201815957 C->T 0 49 0 0 25 19 43.18 288 0 0.00 118 80 40.20 HRAS 0 genome.wustl.edu 37 11 534289 534289 + Missense_Mutation SNP C C G TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C C G C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 11 534289 534289 C G SNP HRAS ENST00000311189 human ensembl 74_37 -1 known missense c.34 p.G12R 0.998 pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom 0 no_errors rs104894229 C->A,G,T 0 29 0 0 10 5 33.33 94 0 0.00 54 48 47.06 MUC2 0 genome.wustl.edu 37 11 1090373 1090373 + Silent SNP G G A TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 G G G A G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 11 1090373 1090373 G A SNP MUC2 ENST00000441003 human ensembl 74_37 1 known silent c.3669 p.P1223 0 NULL pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C 0 no_errors rs146744772 G->A,T 0.9998,.,0.0001997 18 0 0 8 7 46.67 95 1 1.04 41 32 43.84 NCAM1 0 genome.wustl.edu 37 11 113144285 113144285 + RNA SNP C C A TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C C A C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 11 113144285 113144285 C A SNP NCAM1 ENST00000528158 human ensembl 74_37 1 putative rna NULL NULL 1 0 0 0 no_errors 0 0 0 25 0 0 13 9 40.91 184 0 0.00 83 82 49.70 OTOGL 0 genome.wustl.edu 37 12 80722865 80722865 + Missense_Mutation SNP G G T TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 G G G T G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 12 80722865 80722865 G T SNP OTOGL ENST00000458043 human ensembl 74_37 1 known missense c.4287 p.M1429I 0 NULL pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_AbfB,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C 0 no_errors 0 0 0 81 1 1.22 39 28 40.58 322 0 0.00 218 118 35.12 CATSPERB 0 genome.wustl.edu 37 14 92055900 92055900 + Missense_Mutation SNP G G C TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 G G G C G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 14 92055900 92055900 G C SNP CATSPERB ENST00000256343 human ensembl 74_37 -1 known missense c.2934 p.N978K 0.003 NULL superfamily_Sialidases 0 no_errors 0 0 0 100 0 0 37 22 37.29 372 0 0.00 161 61 27.48 EXOC3L4 0 genome.wustl.edu 37 14 103570659 103570659 + Missense_Mutation SNP C C A TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C C A C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 14 103570659 103570659 C A SNP EXOC3L4 ENST00000380069 human ensembl 74_37 1 known missense c.1217 p.A406E 0 pfam_Sec6 pfam_Sec6 0 no_errors 0 0 0 21 0 0 7 6 46.15 56 0 0.00 8 18 69.23 FLYWCH1 0 genome.wustl.edu 37 16 2983738 2983738 + Missense_Mutation SNP C C T TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 16 2983738 2983738 C T SNP FLYWCH1 ENST00000399667 human ensembl 74_37 1 known missense c.1271 p.T424M 0.98 pfam_Znf_FLYWCH pfam_Znf_FLYWCH 0 no_errors rs546346078 C->T 0.9998,0.0001997 67 0 0 46 16 25.81 28 0 0.00 19 13 40.62 SLC9A5 0 genome.wustl.edu 37 16 67298985 67298985 + Nonsense_Mutation SNP C C T TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 16 67298985 67298985 C T SNP SLC9A5 ENST00000299798 human ensembl 74_37 1 known nonsense c.2056 p.R686* 0.997 NULL pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger 0 no_errors 0 0 0 33 0 0 18 9 33.33 185 0 0.00 61 54 46.96 SPG7 0 genome.wustl.edu 37 16 89616931 89616931 + Missense_Mutation SNP A A G TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 A A A G A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 16 89616931 89616931 A G SNP SPG7 ENST00000268704 human ensembl 74_37 1 known missense c.1693 p.K565E 0.996 pfam_Peptidase_M41,tigrfam_FtsH pfam_Peptidase_M41,pfam_ATPase_AAA_core,pfam_Pept_M41_FtsH_extracell,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH 0 no_errors 0 0 0 51 0 0 53 6 10 114 0 0.00 76 15 16.48 NF1 0 genome.wustl.edu 37 17 29677284 29677284 + Nonsense_Mutation SNP G G T TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 G G G T G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 17 29677284 29677284 G T SNP NF1 ENST00000358273 human ensembl 74_37 1 known nonsense c.7405 p.E2469* 1 superfamily_ARM-type_fold pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP 0 no_errors 0 0 0 76 0 0 63 13 17.11 261 0 0.00 256 94 26.78 CRHR1 0 genome.wustl.edu 37 17 43884403 43884403 + Missense_Mutation SNP G G A TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 G G G A G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 17 43884403 43884403 G A SNP CRHR1 ENST00000398285 human ensembl 74_37 1 known missense c.61 p.V21I 0.341 prints_GPCR_2_CRF1_rcpt pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF1_rcpt,prints_GPCR_2_diuretic_rcpt 0 no_errors 0 0 0 20 1 4.76 19 4 17.39 106 0 0.00 56 24 30.00 PPP1R9B 0 genome.wustl.edu 37 17 48211299 48211299 + RNA SNP G G C TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 G G G C G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 17 48211299 48211299 G C SNP PPP1R9B ENST00000501501 human ensembl 74_37 -1 known rna NULL NULL 0.141 0 0 0 no_errors 0 0 0 82 0 0 29 37 54.41 82 0 0.00 30 46 60.53 DDX5 0 genome.wustl.edu 37 17 62496153 62496153 + Missense_Mutation SNP C C T TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 17 62496153 62496153 C T SNP DDX5 ENST00000225792 human ensembl 74_37 -1 known missense c.1733 p.G578E 0.723 pfam_P68HR pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_P68HR,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif 0 no_errors 0 0 0 51 0 0 30 15 33.33 250 0 0.00 207 88 29.83 SKA1 0 genome.wustl.edu 37 18 47917597 47917597 + Missense_Mutation SNP T T A TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 T T T A T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 18 47917597 47917597 T A SNP SKA1 ENST00000285116 human ensembl 74_37 1 known missense c.553 p.S185T 0.931 pfam_DUF1395 pfam_DUF1395 0 no_errors 0 0 0 99 0 0 76 8 9.41 304 0 0.00 134 31 18.79 NLRP8 0 genome.wustl.edu 37 19 56465979 56465979 + Silent SNP C C T TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 19 56465979 56465979 C T SNP NLRP8 ENST00000291971 human ensembl 74_37 1 known silent c.555 p.H185 0 superfamily_P-loop_NTPase pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN 0 no_errors 0 0 0 86 0 0 32 31 49.21 288 0 0.00 109 110 50.23 ZIM3 0 genome.wustl.edu 37 19 57646870 57646870 + Missense_Mutation SNP A A G TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 A A A G A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 19 57646870 57646870 A G SNP ZIM3 ENST00000269834 human ensembl 74_37 -1 known missense c.835 p.Y279H 0.187 pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box 0 no_errors 0 0 0 43 0 0 22 5 18.52 374 0 0.00 281 33 10.51 SLC9A8 0 genome.wustl.edu 37 20 48472034 48472034 + Missense_Mutation SNP A A G TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 A A A G A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 20 48472034 48472034 A G SNP SLC9A8 ENST00000417961 human ensembl 74_37 1 known missense c.677 p.N226S 1 pfam_Cation/H_exchanger,tigrfam_NaH_exchanger pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger 0 no_errors rs200096437 A->G 0.9996,0.0003994 52 0 0 46 7 13.21 228 0 0.00 137 16 10.46 SLC47A1 0 genome.wustl.edu 37 17 19480698 19480701 + Frame_Shift_Del DEL TCAG TCAG - TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 TCAG TCAG TCAG - TCAG TCAG Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 17 19480698 19480701 TCAG 0 DEL SLC47A1 ENST00000395585 human ensembl 74_37 1 known frame_shift_del c.1545_1548 p.S517fs 0.000:0.002:0.000:0.000 NULL pfam_MATE,tigrfam_MATE 0 no_errors 0 0 0 74 0 0 41 17 29.31 224 0 0.00 189 54 22.22 MT-RNR2 0 genome.wustl.edu 37 MT 2279 2279 + RNA SNP T T C TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 MT 2279 2279 T C SNP MT-RNR2 ENST00000387347 human ensembl 74_37 1 known rna NULL NULL NULL 0 0 0 no_errors 0 0 0 78 0 0 7 84 90.32 0 0 0.00 0 0 0.00 NUTM2F 0 genome.wustl.edu 37 9 97083468 97083468 + Nonsense_Mutation SNP G G A TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 9 97083468 97083468 G A SNP NUTM2F ENST00000253262 human ensembl 74_37 -1 known nonsense c.889 p.Q297* 0.015 NULL NULL 0 no_errors 0 0 0 121 0 0 45 4 8.16 0 0 0.00 0 0 0.00 PPP6R2 0 genome.wustl.edu 37 22 50879410 50879410 + Frame_Shift_Del DEL C C - TCGA-ZB-A962-01A-11D-A428-09 TCGA-ZB-A962-10A-01D-A42B-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq b15a543b-b034-46ab-a7a0-5d7412289d1d 9c759b09-fb84-4da3-8080-37917380aa67 22 50879410 50879410 C 0 DEL PPP6R2 ENST00000216061 human ensembl 74_37 1 known frame_shift_del c.2555 p.P854fs 0 NULL pfam_SAPS,superfamily_ARM-type_fold 0 no_errors 0 0 0 43 0 0 22 2 8.33 11 0 0.00 6 0 0.00