Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
ATP10B	0	genome.wustl.edu	37	5	160071155	160071155	+	Silent	SNP	G	G	A			TCGA-XM-A8RE-01A-11D-A423-09	TCGA-XM-A8RE-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	3a72f9eb-97fe-441e-ac97-12cd782543f7	ccd11737-0766-4ef1-89c3-87fee132a7c2	5	160071155	160071155	G	A	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	silent	c.858	p.V286	1	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	0	no_errors	0	0	0	45	0	0	38	4	9.52	165	0	0.00	129	7	5.07
CACNA1I	0	genome.wustl.edu	37	22	40066205	40066205	+	Missense_Mutation	SNP	C	C	T			TCGA-XM-A8RE-01A-11D-A423-09	TCGA-XM-A8RE-10A-01D-A426-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	3a72f9eb-97fe-441e-ac97-12cd782543f7	ccd11737-0766-4ef1-89c3-87fee132a7c2	22	40066205	40066205	C	T	SNP	CACNA1I	ENST00000336649	human	ensembl	74_37	1	known	missense	c.4375	p.R1459W	1	prints_VDCC_T_a1su	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	0	no_errors	0	0	0	45	0	0	32	4	11.11	30	0	0.00	36	2	5.26
TRAK1	0	genome.wustl.edu	37	3	42251577	42251578	+	In_Frame_Ins	INS	-	-	GGAGGA			TCGA-XM-A8RE-01A-11D-A423-09	TCGA-XM-A8RE-10A-01D-A426-09	-	-	-	GGAGGA	-	-	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	3a72f9eb-97fe-441e-ac97-12cd782543f7	ccd11737-0766-4ef1-89c3-87fee132a7c2	3	42251577	42251578	0	GGAGGA	INS	TRAK1	ENST00000341421	human	ensembl	74_37	1	known	in_frame_ins	c.1889_1890	p.634in_frame_insEE	0.010:0.044	NULL	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	0	no_errors	0	0	0	16	1	5.88	22	3	12	6	0	0.00	4	2	33.33
PRR21	0	genome.wustl.edu	37	2	240981520	240981520	+	Missense_Mutation	SNP	C	C	G			TCGA-XM-A8RE-01A-11D-A423-09	TCGA-XM-A8RE-10A-01D-A426-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3a72f9eb-97fe-441e-ac97-12cd782543f7	ccd11737-0766-4ef1-89c3-87fee132a7c2	2	240981520	240981520	C	G	SNP	PRR21	ENST00000408934	human	ensembl	74_37	-1	known	missense	c.880	p.V294L	0	NULL	NULL	0	no_errors	rs28711942	C->G,T	0	14	0	0	20	9	31.03	0	0	0.00	0	0	0.00
PCDHB3	0	genome.wustl.edu	37	5	140482342	140482342	+	Silent	SNP	T	T	C			TCGA-XM-A8RE-01A-11D-A423-09	TCGA-XM-A8RE-10A-01D-A426-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3a72f9eb-97fe-441e-ac97-12cd782543f7	ccd11737-0766-4ef1-89c3-87fee132a7c2	5	140482342	140482342	T	C	SNP	PCDHB3	ENST00000231130	human	ensembl	74_37	1	known	silent	c.2109	p.F703	0	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	0	no_errors	rs17844403	T->C	0	35	1	2.78	36	7	16.28	3	0	0.00	5	0	0.00
KRT10	0	genome.wustl.edu	37	17	38975308	38975319	+	In_Frame_Del	DEL	GCCGCCGTGGCC	GCCGCCGTGGCC	-			TCGA-XM-A8RE-01A-11D-A423-09	TCGA-XM-A8RE-10A-01D-A426-09	GCCGCCGTGGCC	GCCGCCGTGGCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3a72f9eb-97fe-441e-ac97-12cd782543f7	ccd11737-0766-4ef1-89c3-87fee132a7c2	17	38975308	38975319	GCCGCCGTGGCC	0	DEL	KRT10	ENST00000269576	human	ensembl	74_37	-1	known	in_frame_del	c.1479_1468	p.GHGG490in_frame_del	0.000:0.033:0.004:0.000:0.093:0.094:0.097:0.060:0.001:0.098:0.969:0.979	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	0	no_errors	0	0	0	18	0	0	27	6	18.18	0	0	0.00	0	0	0.00