Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL TVaf_SOL NTotCov_SOL NVarCov_SOL NVaf_SOL dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq Ttot_rna Tvar_rna Tvaf_rna note germline-maf-frequency IGV ESPN 83715 broad.mit.edu 37 1 6504676 6504676 + Missense_Mutation SNP A A C novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . ESPN NM_031475 exon6 c.A1126C p.T376P ACCAGCACCCTCT 169 30 0.18 148 30 0.2027027027 32 0 0 PRPF38A 84950 mdanderson.org 37 1 52876860 52876860 + Silent SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_032864 exon4 c.G486T p.L162L CATTCTGCCCCGA 49 3 0.06 49 0 0 114 0 0.00 LRP8 7804 broad.mit.edu;bcgsc.ca 37 1 53741395 53741395 + Missense_Mutation SNP T T C novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . LRP8 NM_004631 exon6 c.A914G p.Q305R CCACACTGGAACT 108 6 0.06 89 0 0 58 1 0 0.00 TCHH 7062 broad.mit.edu 37 1 152082647 152082647 + Missense_Mutation SNP A A G novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 TCHH,extremity,malignant_melanoma,0,1 TCHH NM_007113 exon3 c.T3046C p.W1016R TCTCCCACTCCTG 155 6 0.04 110 6 0.0545454545 275 1 0 0 PKP1 5317 mdanderson.org 37 1 201294223 201294223 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_000299 exon12 c.G2052T p.M684I CAGCATGCTCAAC 93 4 0.04 85 0 0 0 0 ZC3H11A 9877 broad.mit.edu 37 1 203821424 203821424 + Missense_Mutation SNP T T C novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . ZC3H11A NM_014827 exon20 c.T2330C p.I777T AACTAATATGGGA 357 5 0.01 374 1 0.0026737968 71 104 0 0.00 ZBTB18 10472 mdanderson.org 37 1 244218106 244218106 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_205768 exon2 c.G1030T p.D344Y AGTGATGATGAGA 66 4 0.06 64 0 0 21 0 0.00 PFKFB3 5209 mdanderson.org 37 10 6263368 6263368 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_004566 exon9 c.G856T p.V286L AAGTTCGTGGAGG 64 3 0.05 85 0 0 16 0 0.00 PCDH15 65217 broad.mit.edu 37 10 55582229 55582229 + Missense_Mutation SNP T T G novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 PCDH15_ENST00000417177,colon,carcinoma,0,2 PCDH15 NM_001142763 exon35 c.A5278C p.I1760L GAGAAATAGGAGG 51 6 0.12 51 2 0.0392156863 1715 2 0 0 FRAT2 23401 mdanderson.org 37 10 99093719 99093719 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_012083 exon1 c.C611A p.A204E GTGGCTGCAACCG 15 2 0.13 15 0 0 53 0 0.00 RRP12 23223 mdanderson.org 37 10 99131871 99131871 + Missense_Mutation SNP C C A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_015179 exon20 c.G2302T p.A768S TGATGGCAGCTTC 53 3 0.06 60 1 0.0166666667 58 0 0.00 MUC2 4583 hgsc.bcm.edu 37 11 1092884 1092884 + Missense_Mutation SNP C C T rs201415503 TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 MUC2_ENST00000441003,NS,carcinoma,0,8 MUC2_ENST00000441003 NM_002457 exon30 c.C4703T p.T1568M CCACCACGGTGAC 69 3 0.04 61 1 0.0163934426 0 8 0 0 TMEM179B 374395 broad.mit.edu 37 11 62556810 62556810 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 TMEM179B,NS,carcinoma,0,1 TMEM179B NM_199337 exon3 c.G331T p.V111F ATAGCCGTCTTCC 181 4 0.02 152 0 0 13 1 196 0 0.00 ESRRA 2101 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 11 64082666 64082666 + Silent SNP A A G novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 ESRRA,colon,carcinoma,0,1 ESRRA NM_004451 exon6 c.A936G p.L312L GCAACTAGTGCGG 73 5 0.07 66 0 0 0 1 71 0 0.00 CADM1 23705 hgsc.bcm.edu;mdanderson.org 37 11 115080343 115080343 + Silent SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 CADM1,NS,carcinoma,0,6 CADM1 NM_014333 exon8 c.C1029A p.T343T GGTGGTGGTTGTT 43 4 0.09 50 1 0.02 0 6 11 0 0.00 TECTA 7007 broad.mit.edu 37 11 120980079 120980079 + Missense_Mutation SNP G G A rs370688947 alternate_allele TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . TECTA NM_005422 exon3 c.G358A p.A120T GAGCCTGCCATCT 144 4 0.03 137 0 0 329 1 0 0.00 BCL11B 64919 hgsc.bcm.edu 37 14 99641568 99641568 + Missense_Mutation SNP C C G novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 BCL11B,colon,carcinoma,0,1 BCL11B NM_138576 exon4 c.G1605C p.E535D CTCCTCCTCGTCC 16 2 0.13 14 0 0 0 1 0 0 CDC42BPB 9578 mdanderson.org 37 14 103410270 103410270 + Missense_Mutation SNP G G A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_006035 exon30 c.C4366T p.R1456C GCGCGCGTGCCCT 54 3 0.06 46 0 0 32 0 0.00 RAB11A 8766 mdanderson.org 37 15 66170130 66170130 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_004663 exon3 c.G267T p.L89F CTTATTGGTTTAT 138 5 0.04 88 0 0 114 0 0.00 WDR24 84219 mdanderson.org 37 16 737362 737362 + Silent SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_032259 exon3 c.C714A p.T238T GTGCGTGGTCATG 32 3 0.09 39 0 0 16 0 0.00 LOC653786 0 broad.mit.edu 37 16 22579566 22579573 + RNA DEL ATTCATCC ATTCATCC - novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 ATTCATCC ATTCATCC Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . . . . . GGGTTAATTCATC 95 0 0.00 90 0 0 0 0 . 0 broad.mit.edu 37 16 32077601 32077601 + RNA SNP G G A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . . . . . CTCCAGGGACAAC 322 6 0.02 265 0 0 7 7 1.00 rescued with RNA-seq HSF4 3299 mdanderson.org 37 16 67203614 67203614 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_001040667 exon15 c.G1405T p.A469S CCTGGGGCTTTAA 53 3 0.06 49 0 0 7 0 0.00 ANKRD11 29123 broad.mit.edu;bcgsc.ca 37 16 89351844 89351844 + Missense_Mutation SNP T T C novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . ANKRD11 NM_001256183 exon9 c.A1106G p.K369R TAGTCCTTTTTCA 177 7 0.04 188 1 0.0053191489 195 34 0 0.00 . 0 broad.mit.edu 37 17 17579770 17579771 + RNA DEL TG TG - rs72152573 alternate_allele TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 TG TG Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . . . . . CAAGGCTGTGTGT 12 4 0.33 7 0 0 0 0 SPOP 8405 broad.mit.edu 37 17 47688679 47688679 + Silent SNP G G A rs148282868 TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . SPOP NM_001007228 exon6 c.C621T p.A207A CTGGCCGGCAACA 138 3 0.02 99 0 0 91 40 0 0.00 PRPSAP1 5635 mdanderson.org 37 17 74349677 74349677 + Silent SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_002766 exon1 c.C108A p.G36G TCGGTAGCCGGTG 47 3 0.06 29 0 0 35 0 0.00 GRIN3B 116444 broad.mit.edu 37 19 1009551 1009577 + In_Frame_Del DEL GCCCCCGCGGAGGCCCCACCACACTCT GCCCCCGCGGAGGCCCCACCACACTCT - rs58448123 alternate_allele TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 GCCCCCGCGGAGGCCCCACCACACTCT GCCCCCGCGGAGGCCCCACCACACTCT Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 GRIN3B,NS,carcinoma,-1,1 GRIN3B NM_138690 exon9 c.3082_3108del p.1028_1036del AGAGCGGCCCCCG 6 5 0.83 7 0 0 46 1 0 0 KEAP1 9817 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 19 10610444 10610444 + Missense_Mutation SNP G G A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_012289 exon2 c.C266T p.P89L GCGGCCGGTGCAT 89 4 0.04 87 0 0 40 0 0.00 PSG4 5672 hgsc.bcm.edu;mdanderson.org 37 19 43699192 43699192 + Missense_Mutation SNP G G T rs367853186 alternate_allele TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_002780 exon4 c.C943A p.H315N CATATCGGTCCCG 55 4 0.07 42 0 0 0 0 PRR12 57479 mdanderson.org 37 19 50117808 50117808 + Missense_Mutation SNP C C T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_020719 exon7 c.C4792T p.R1598C ACGGGGCGTGAAC 28 3 0.11 35 0 0 48 0 0.00 MBOAT7 79143 broad.mit.edu 37 19 54682579 54682579 + Missense_Mutation SNP G G A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . MBOAT7 NM_001146082 exon7 c.C934T p.R312W GCACCCGCACGCA 164 4 0.02 160 1 0.00625 37 99 0 0.00 ZNF579 163033 mdanderson.org 37 19 56090220 56090220 + Silent SNP C C G novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_152600 exon2 c.G786C p.G262G CGGGGGCCCCCCT 112 19 0.17 91 4 0.043956044 12 0 0.00 EPCAM 4072 broad.mit.edu 37 2 47596282 47596282 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . EPCAM . . . . GGCCGCGCCCCAA 21 5 0.24 27 2 0.0740740741 27 2 0 0.00 STAMBP 10617 broad.mit.edu 37 2 74077544 74077544 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . STAMBP NM_006463 exon8 c.G909T p.K303N CCCCAAGCAAAGT 320 5 0.02 283 0 0 37 52 0 0.00 ANKRD36BP2 0 broad.mit.edu 37 2 89102230 89102230 + RNA SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . . . . . CATCAGGTAGCTG 49 4 0.08 40 1 0.025 0 0 MZT2B 80097 broad.mit.edu 37 2 130948058 130948058 + Silent SNP C C T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 MZT2B,caecum,carcinoma,0,1 MZT2B NM_025029 exon3 c.C336T p.S112S AGGCAGCGCTGCC 155 4 0.03 163 0 0 5 1 462 1 0.00 DES 1674 broad.mit.edu 37 2 220286080 220286080 + Missense_Mutation SNP C C A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . DES NM_001927 exon6 c.C1042A p.Q348K ATGAGGCAGATGC 130 7 0.05 97 1 0.0103092784 53 8 0 0.00 BAGE 85319 broad.mit.edu 37 21 11071942 11071942 + RNA DEL G G - novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . . . . . ACACCTGGGAGTA 11 6 0.55 4 0 0 0 0 GATSL3 652968 mdanderson.org 37 22 30682339 30682339 + Missense_Mutation SNP C C A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_001037666 exon6 c.G656T p.S219I TCAGGACTGCTAG 48 3 0.06 53 0 0 41 0 0.00 MTFP1 51537 mdanderson.org 37 22 30821931 30821931 + Missense_Mutation SNP C C A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_016498 exon1 c.C64A p.L22M CGATACCTGGGTG 42 3 0.07 32 0 0 52 0 0.00 ZNF621 285268 mdanderson.org 37 3 40573808 40573808 + Nonsense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 ZNF621,NS,carcinoma,0,1 ZNF621 NM_001098414 exon5 c.G547T p.E183X TGTAAGGAGTGTG 54 3 0.06 46 0 0 0 1 5 0 0.00 GLYCTK 132158 mdanderson.org 37 3 52325040 52325040 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_145262 exon3 c.G442T p.D148Y CTCCCGGACCGCG 50 3 0.06 61 0 0 31 0 0.00 CCDC37 348807 broad.mit.edu 37 3 126135309 126135309 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . CCDC37 NM_182628 exon5 c.G376T p.A126S CAGCGCGCCTTCC 91 6 0.07 63 1 0.0158730159 69 0 0 KIT 3815 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 4 55594221 55594221 + Missense_Mutation SNP A A G rs121913512 bycluster TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 KIT,NS,malignant_melanoma,0,38 KIT NM_000222 exon13 c.A1924G p.K642E GAACTCAAAGTCC 160 8 0.05 164 0 0 0 38 29 13 0.45 UGT2B11 10720 mdanderson.org 37 4 70066408 70066408 + Missense_Mutation SNP C C A rs200919649 TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_001073 exon6 c.G1340T p.R447I TGAATTCTTGATA 91 7 0.08 104 1 0.0096153846 0 0 LOC285441 644042 bcgsc.ca 37 4 187250120 187250120 + RNA SNP C C A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . . . . . ATCATACGGCTGA 39 4 0.10 29 0 0 0 0 TRIP13 9319 mdanderson.org 37 5 908524 908524 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_001166260 exon9 c.G814T p.D272Y CCATCAGATGCCA 40 3 0.08 50 0 0 8 0 0.00 NEUROG1 4762 mdanderson.org 37 5 134871333 134871333 + Missense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_006161 exon1 c.C48A p.S16R GCTGCTGCTGGCG 26 3 0.12 21 0 0 0 0 SLC4A9 83697 mdanderson.org 37 5 139747091 139747091 + Silent SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_001258428 exon15 c.G2172T p.L724L TGCCCTGCTGCTG 55 3 0.05 76 0 0 0 0 SIMC1 375484 mdanderson.org 37 5 175665527 175665527 + Missense_Mutation SNP G G A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_198567 exon1 c.G16A p.V6M TTCATCGTGATCT 16 3 0.19 18 0 0 0 0 MDC1 9656 broad.mit.edu 37 6 30681594 30681594 + Nonsense_Mutation SNP G G T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . MDC1 NM_014641 exon3 c.C503A p.S168X TCCTCCGAGTCCT 129 5 0.04 133 0 0 218 3 0 0.00 MUC21 394263 broad.mit.edu 37 6 30954534 30954534 + Silent SNP T T A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 MUC21,NS,carcinoma,0,3 MUC21 NM_001010909 exon2 c.T582A p.T194T CAGCACTGCCACC 63 4 0.06 65 1 0.0153846154 98 3 4 0 0.00 SKIV2L 6499 bcgsc.ca;mdanderson.org 37 6 31933780 31933780 + Missense_Mutation SNP G G T rs372669695 alternate_allele TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . SKIV2L NM_006929 exon18 c.G2192T p.R731L TGCACCGCATGAT 59 5 0.08 65 0 0 97 50 0 0.00 UNC93A 54346 ucsc.edu 37 6 167728900 167728901 + Missense_Mutation DNP TC TC CG novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 TC TC Unknown Untested Somatic WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 UNC93A,ear,carcinoma,+1,2 UNC93A NM_018974 exon8 c.C1335G p.V445A GACAGGTCAACCA 80 11 0.14 58 8 0.1379310345 66 2 0 0 PKN3 29941 mdanderson.org 37 9 131467791 131467791 + Silent SNP C C A novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_013355 exon2 c.C234A p.I78I CCGAATCCTGCTG 44 3 0.07 66 0 0 1 0 0.00 EHMT1 79813 mdanderson.org 37 9 140707983 140707983 + Splice_Site SNP G G T rs137852724 TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_024757 exon21 c.3180+1G>T . CTGCAGGTGAGTG 45 3 0.07 25 0 0 0 0 GATA1 2623 mdanderson.org 37 X 48651622 48651622 + Missense_Mutation SNP C C T novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . . NM_002049 exon5 c.C788T p.T263M GCCAGACGACCAC 55 3 0.05 41 0 0 0 0 TSPYL2 64061 broad.mit.edu 37 X 53112000 53112000 + Missense_Mutation SNP A A G novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . TSPYL2 NM_022117 exon1 c.A320G p.E107G ATGGGGAGGCGCC 120 5 0.04 110 0 0 53 22 0 0.00 CDX4 1046 broad.mit.edu 37 X 72667531 72667531 + Missense_Mutation SNP T T C novel TCGA-YU-A90S-01A-11D-A435-10 TCGA-YU-A90S-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 786db3db-1833-4d7f-8168-a9f029de4c19 d44ef07d-f21c-4327-893b-536b55976470 . CDX4 NM_005193 exon1 c.T442C p.S148P GCCAGTTCCCCCA 29 5 0.17 21 2 0.0952380952 52 0 0