Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL TVaf_SOL NTotCov_SOL NVarCov_SOL NVaf_SOL dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq Ttot_rna Tvar_rna Tvaf_rna note germline-maf-frequency IGV DDX11L1 0 broad.mit.edu 37 1 13411 13411 + RNA DEL C C - novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . . . . . CCTCCACCACCCC 12 2 0.17 16 0 0 6 0 0.00 AGRN 375790 broad.mit.edu 37 1 955613 955613 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . AGRN NM_198576 exon1 c.G61T p.A21S GTGGCCGCGTGCG 5 2 0.40 12 0 0 110 0 0 RNF186 0 broad.mit.edu 37 1 20142036 20142036 + RNA DEL T T - novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . RNF186 . . . . TTTAACTTTTTTT 6 2 0.33 5 0 0 14 0 0 GPN2 54707 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 27216507 27216507 + Silent SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 GPN2,NS,carcinoma,-2,1 GPN2 NM_018066 exon1 c.G81A p.L27L CATGCCCAGGCAG 20 5 0.25 21 0 0 18 1 16 3 0.19 FCRL2 79368 mdanderson.org 37 1 157716685 157716685 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_030764 exon11 c.C1464A p.N488K CCTGATGTTTGCT 22 2 0.09 22 0 0 12 0 0.00 ARMC4 55130 ucsc.edu 37 10 28250581 28250581 + Missense_Mutation SNP T T A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 T T Unknown Untested Somatic WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . ARMC4 NM_018076 exon10 c.A1302T p.E434D TGGTTCTTCATCT 153 14 0.09 127 5 0.0393700787 177 0 0 PDCD11 22984 hgsc.bcm.edu;broad.mit.edu 37 10 105160253 105160253 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_014976 exon3 c.G202T p.A68S AAGTCCGCAAGAG 74 4 0.05 79 0 0 118 0 0.00 FANK1 92565 mdanderson.org 37 10 127585221 127585221 + Nonsense_Mutation SNP C C T rs202109621 TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_145235 exon1 c.C10T p.Q4X GAGCCCCAGAGTA 29 3 0.10 15 0 0 7 0 0.00 JAKMIP3 282973 mdanderson.org 37 10 133976881 133976881 + Silent SNP C C A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 JAKMIP3,NS,carcinoma,0,1 JAKMIP3 NM_001105521 exon19 c.C2383A p.R795R ATCCTGCGGGAGC 12 2 0.17 25 0 0 0 1 0 0 MUC5B 727897 mdanderson.org 37 11 1258387 1258387 + Missense_Mutation SNP G G A rs202160055 TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 MUC5B,NS,carcinoma,+1,4 MUC5B NM_002458 exon25 c.G3290A p.R1097H CCTGCCGCTCCCA 27 3 0.11 23 1 0.0434782609 1 4 0 0 KRTAP5-2 440021 broad.mit.edu 37 11 1619052 1619052 + Nonsense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . KRTAP5-2 NM_001004325 exon1 c.C429A p.C143X GGACTGGCAGCAG 68 3 0.04 96 0 0 38 0 0 CDKN1C 1028 mdanderson.org 37 11 2906488 2906488 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_000076 exon1 c.C232A p.Q78K TCCACTGCAGGCG 34 3 0.09 35 0 0 7 0 0.00 ARAP1 116985 mdanderson.org 37 11 72404840 72404840 + Silent SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001040118 exon28 c.G3705A p.L1235L AAAGTGCAGGGGG 29 3 0.10 53 0 0 112 0 0.00 TMPRSS4 56649 mdanderson.org 37 11 117982461 117982461 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_019894 exon8 c.G589T p.G197W GCCTGTGGGAAGA 53 3 0.06 53 0 0 0 0 HYOU1 10525 mdanderson.org 37 11 118925732 118925732 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001130991 exon6 c.C460A p.L154I AATTGAGAACCAT 35 3 0.09 44 0 0 124 0 0.00 ERC1 23085 broad.mit.edu 37 12 1292505 1292505 + Missense_Mutation SNP A A G novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . ERC1 NM_178040 exon11 c.A2075G p.K692R TGAAAAAGGACTC 705 7 0.01 428 2 0.0046728972 95 54 0 0.00 KRAS 3845 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 25380276 25380276 + Missense_Mutation SNP T T C rs121913240 bycluster TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 KRAS_ENST00000256078,colon,carcinoma,+1,429 KRAS_ENST00000256078 NM_004985 exon3 c.A182G p.Q61R TCCTCTTGACCTG 152 11 0.07 101 0 0 1 429 86 2 0.02 VDR 7421 mdanderson.org 37 12 48240170 48240170 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001017536 exon9 c.C1122A p.N374K ATGCAAGTTCAGC 36 3 0.08 45 0 0 2 0 0.00 KRT84 3890 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 52779018 52779018 + Missense_Mutation SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_033045 exon1 c.G352A p.G118S GGCCACCAAAGCC 94 7 0.07 117 0 0 0 0 CCDC41 51134 hgsc.bcm.edu 37 12 94796963 94796963 + Missense_Mutation SNP A A G novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_016122 exon5 c.T400C p.F134L TCCTAAAACGTTC 65 4 0.06 47 0 0 19 0 0.00 TPTE2P1 0 broad.mit.edu 37 13 25527621 25527623 + RNA DEL AAC AAC - novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 AAC AAC Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . . . . . ATCTATAACAATA 7 3 0.43 8 0 0 0 0 STOML3 161003 mdanderson.org 37 13 39542626 39542626 + Silent SNP G G T rs202188494 bycluster;alternate_allele TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 STOML3,NS,carcinoma,+1,2 STOML3 NM_145286 exon6 c.C562A p.R188R CCACTCGGGCCAC 47 3 0.06 75 0 0 1 2 0 0 LRCH1 23143 mdanderson.org 37 13 47275277 47275277 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 LRCH1_ENST00000311191,NS,lymphoid_neoplasm,+1,2 LRCH1_ENST00000311191 NM_001164211 exon11 c.G1335T p.Q445H AGATCAGGACATG 41 3 0.07 68 0 0 1 2 12 0 0.00 SUGT1 10910 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 13 53239790 53239791 + Frame_Shift_Del DEL AG AG - novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 AG AG Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . SUGT1 NM_001130912 exon10 c.536_537del p.179_179del TCAAACAGAATCT 146 22 0.15 197 0 0 37 61 0 0.00 F7 2155 mdanderson.org 37 13 113770083 113770083 + Silent SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_000131 exon6 c.G540T p.L180L CTCTCTGCTGGCA 44 3 0.07 93 0 0 0 0 GPHB5 122876 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 63779821 63779821 + RNA SNP G G A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . GPHB5 . . . . GTTCCAGAATGGG 209 36 0.17 201 1 0.0049751244 57 0 0 GOLGA6L1 283767 broad.mit.edu 37 15 22742718 22742718 + Missense_Mutation SNP T T A rs77248890 TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 GOLGA6L1,NS,carcinoma,0,3 GOLGA6L1 NM_001001413 exon8 c.T1103A p.L368Q GGAGGCTGGAGGA 102 6 0.06 99 1 0.0101010101 20 3 1 0 0.00 CREBBP 1387 bcgsc.ca 37 16 3777942 3777942 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 CREBBP,colon,carcinoma,+1,2 CREBBP NM_004380 exon31 c.C7106A p.P2369H GGCTGGGGCTGTA 44 4 0.09 67 0 0 546 2 224 0 0.00 XYLT1 64131 mdanderson.org 37 16 17228331 17228331 + Nonsense_Mutation SNP G G A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_022166 exon9 c.C2026T p.R676X CTCACCGGCAGCT 24 2 0.08 31 0 0 2 0 0.00 ACD 65057 mdanderson.org 37 16 67694279 67694279 + Missense_Mutation SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001082487 exon1 c.G103A p.A35T GTCCTGCTCGGGG 40 3 0.08 51 0 0 0 0 ZCCHC14 23174 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 87451243 87451243 + Silent SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 ZCCHC14,caecum,carcinoma,-1,2 ZCCHC14 NM_015144 exon8 c.G795A p.A265A GCTGCCCGCATGG 47 6 0.13 74 0 0 -1 2 6 0 0.00 RNMTL1 55178 mdanderson.org 37 17 686391 686391 + Missense_Mutation SNP G G A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_018146 exon2 c.G383A p.R128H AAGGTCGCAGGCT 48 3 0.06 91 0 0 45 0 0.00 SLC35G6 643664 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 7386120 7386120 + Missense_Mutation SNP G G C novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001102614 exon2 c.G817C p.A273P AGCTATGCGGTCA 119 9 0.08 157 0 0 0 0 FLJ36000 0 broad.mit.edu 37 17 21906822 21906822 + RNA DEL G G - rs58465113 alternate_allele TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . . . . . GTGTGTGTGTGTG 6 2 0.33 7 0 0 1 0 0.00 TMEM132E 124842 mdanderson.org 37 17 32962085 32962085 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_207313 exon8 c.G1686T p.E562D ACTGGAGCCAGGC 36 3 0.08 79 0 0 0 0 STARD3 10948 mdanderson.org 37 17 37817269 37817269 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_006804 exon13 c.G1070T p.R357M GGCGCAGGGACCG 46 3 0.07 74 0 0 86 0 0.00 GRB7 2886 mdanderson.org 37 17 37903113 37903113 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001242442 exon15 c.G1631T p.C544F TGCCGTGCTTGCT 22 3 0.14 35 0 0 36 0 0.00 KRTAP1-1 81851 hgsc.bcm.edu;broad.mit.edu 37 17 39197304 39197304 + Missense_Mutation SNP T T C novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 KRTAP1-1,NS,malignant_melanoma,0,1 KRTAP1-1 NM_030967 exon1 c.A346G p.I116V ACCTGATACGGGT 70 3 0.04 75 1 0.0133333333 0 1 0 0 TMC6 11322 mdanderson.org 37 17 76120700 76120700 + Missense_Mutation SNP G G C novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001127198 exon8 c.C796G p.L266V CCACCAGCAGCAG 31 3 0.10 58 0 0 40 0 0.00 TSPAN10 83882 broad.mit.edu;ucsc.edu;mdanderson.org 37 17 79612648 79612648 + RNA SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . TSPAN10 . . . . TGGCAGCAGAACC 32 4 0.13 40 0 0 21 4 0 0.00 . 0 broad.mit.edu 37 18 11911003 11911004 + RNA INS - - G rs71172029 bycluster;by1000genomes TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . . . . . CTCTCAAGGTGGA 9 8 0.89 10 0 0 0 0 ONECUT3 390874 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 1775247 1775247 + Missense_Mutation SNP A A G novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 ONECUT3,colon,carcinoma,-2,1 ONECUT3 NM_001080488 exon2 c.A1288G p.I430V ACGCTGATCGCCA 131 36 0.27 134 0 0 -2 1 3 0 0.00 DOT1L 84444 mdanderson.org 37 19 2216567 2216567 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 DOT1L_ENST00000398665,NS,carcinoma,0,2 DOT1L_ENST00000398665 NM_032482 exon20 c.G2211T p.Q737H GCCCCAGTACCTG 29 3 0.10 21 0 0 0 2 51 0 0.00 DOT1L 84444 mdanderson.org 37 19 2226654 2226654 + Silent SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_032482 exon27 c.G4134T p.G1378G GGCTGGGCTGAAG 15 3 0.20 12 0 0 58 0 0.00 SEMA6B 10501 mdanderson.org 37 19 4555566 4555566 + Missense_Mutation SNP A A T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_032108 exon7 c.T482A p.L161Q GGCTGCAGGGTGT 47 3 0.06 85 0 0 21 0 0.00 KDM4B 23030 broad.mit.edu 37 19 5047517 5047517 + Missense_Mutation SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . KDM4B NM_015015 exon6 c.C463T p.R155W AGCCTCCGGACCA 83 3 0.04 74 0 0 120 12 0 0.00 ZNF358 140467 mdanderson.org 37 19 7585211 7585211 + Silent SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 ZNF358,NS,carcinoma,+1,1 ZNF358 NM_018083 exon2 c.G1083T p.A361A CTCAGCGCTGCTC 27 3 0.11 34 0 0 1 1 90 0 0.00 OLFM2 93145 bcgsc.ca 37 19 10024251 10024251 + Missense_Mutation SNP T T C novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 T T Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . OLFM2 . . . . TGGCCATGGTGCT 24 4 0.17 22 0 0 42 5 3 0.60 ANKLE1 126549 broad.mit.edu 37 19 17397500 17397501 + Frame_Shift_Del DEL TT TT - rs10606406 alternate_allele TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 TT TT Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . ANKLE1 . . . . TGTGTGTTTGTGT 7 6 0.86 14 0 0 27 2 0 0.00 WDR87 83889 ucsc.edu 37 19 38377404 38377404 + Missense_Mutation SNP C C T rs201328117 TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . WDR87 NM_031951 exon6 c.G6790A p.E2264K CCTCCTCCCTTAC 87 19 0.22 124 0 0 191 1 0 0.00 EMP3 2014 mdanderson.org 37 19 48833719 48833719 + Missense_Mutation SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001425 exon5 c.C484T p.R162W CGGAAGCGGGAGT 45 3 0.07 50 0 0 110 0 0.00 ALDH16A1 126133 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 49967466 49967466 + Missense_Mutation SNP G G A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_153329 exon10 c.G1277A p.G426D GCGGGGGCAGCGC 31 6 0.19 43 0 0 167 56 0.34 KLK11 11012 broad.mit.edu 37 19 51528037 51528037 + Silent SNP T T C novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . KLK11 NM_144947 exon3 c.A150G p.G50G GGTCTCTCCCCCT 60 3 0.05 89 1 0.0112359551 28 0 0 FBXO11 80204 mdanderson.org 37 2 48132711 48132711 + Missense_Mutation SNP T T G novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001190274 exon1 c.A149C p.Q50P TGCTGCTGCGGCG 8 3 0.38 8 0 0 1 0 0.00 ALS2CR12 130540 mdanderson.org 37 2 202195505 202195505 + Nonsense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_139163 exon8 c.C576A p.Y192X TGCTTTGTAGTTG 77 4 0.05 70 0 0 0 0 SPTLC3 55304 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 20 13107267 13107267 + Silent SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_018327 exon9 c.G1182T p.S394S TCACTCGCATAGT 106 5 0.05 124 0 0 1 0 0.00 FRG1B 284802 mdanderson.org 37 20 29633902 29633902 + RNA SNP C C A rs145072022 TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . . . . . AGAGAACCAAATT 173 8 0.05 190 1 0.0052631579 47 1 0.02 TOX2 84969 hgsc.bcm.edu 37 20 42694570 42694570 + Silent SNP A A G novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 TOX2_ENST00000348077,colon,carcinoma,0,2 TOX2_ENST00000348077 NM_001098797 exon7 c.A1179G p.P393P GCCGCCACCCTCC 53 3 0.06 48 0 0 0 2 18 2 0.11 SNAI1 6615 mdanderson.org 37 20 48600448 48600448 + Missense_Mutation SNP C C A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_005985 exon2 c.C170A p.P57Q CGCTGCCAATGCT 44 3 0.07 52 0 0 92 0 0.00 CEBPB 1051 mdanderson.org 37 20 48808332 48808332 + Silent SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_005194 exon1 c.G762T p.P254P CGCGCCGGCGCCC 28 3 0.11 25 0 0 92 0 0.00 ZDHHC8 29801 mdanderson.org 37 22 20128208 20128208 + Silent SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001185024 exon6 c.G729T p.V243V GCACGTGCTGTGT 46 3 0.07 51 0 0 14 0 0.00 LOC648691 0 bcgsc.ca 37 22 22901775 22901775 + Translation_Start_Site SNP A A G novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 A A Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . . . . . AGGGGGATGGTCA 78 4 0.05 49 1 0.0204081633 0 0 HMGXB4 10042 hgsc.bcm.edu;bcgsc.ca 37 22 35661554 35661554 + Silent SNP G G A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001003681 exon5 c.G1173A p.K391K AAAAAAGAAAAAA 146 12 0.08 104 0 0 32 1 0.03 CRYBG3 131544 mdanderson.org 37 3 97662072 97662072 + Nonsense_Mutation SNP G G T rs200227709 bycluster;byfrequency;alternate_allele TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_153605 exon22 c.G8827T p.G2943X TTAGGAGGAAATT 35 3 0.09 35 0 0 18 0 0.00 . 0 broad.mit.edu 37 3 114998900 114998900 + RNA DEL A A - novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . . . . . AAATTTAAAAAAA 8 4 0.50 4 0 0 0 0 MUC4 4585 hgsc.bcm.edu 37 3 195505877 195505877 + Missense_Mutation SNP G G A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 MUC4_ENST00000463781,NS,carcinoma,+1,1 MUC4_ENST00000463781 NM_018406 exon2 c.C12574T p.P4192S GAAGAGGGGTGGT 69 8 0.12 74 2 0.027027027 1 1 3 0 0.00 TRMT44 152992 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 8470016 8470016 + Missense_Mutation SNP A A G novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_152544 exon9 c.A1870G p.K624E GGTGGAAAGCAAT 66 16 0.24 79 0 0 10 3 0.30 SGTB 54557 mdanderson.org 37 5 65008803 65008803 + Silent SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 SGTB,NS,meningioma,0,1 SGTB NM_019072 exon3 c.C189A p.T63T GGAACTGGTAAAC 49 3 0.06 77 0 0 0 1 22 0 0.00 PAIP2 51247 broad.mit.edu;ucsc.edu;mdanderson.org 37 5 138700433 138700433 + Splice_Site SNP G G A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . PAIP2 NM_016480 exon3 c.318+1G>A . CTTGTGGTAAAAA 71 4 0.06 94 0 0 10 36 9 0.25 DIAPH1 1729 mdanderson.org 37 5 140953766 140953766 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_005219 exon16 c.C1651A p.L551M TTGTCAGCTTGGC 41 3 0.07 56 0 0 73 0 0.00 UBD 10537 hgsc.bcm.edu;broad.mit.edu 37 6 29524057 29524058 + Frame_Shift_Ins INS - - T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 - - Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . UBD NM_006398 exon2 c.98_99insA p.I33fs TCTTTGATTTTTT 134 10 0.07 133 0 0 13 1253 0 0.00 NCOA7 135112 broad.mit.edu;mdanderson.org 37 6 126249822 126249822 + Nonsense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . NCOA7 NM_001199619 exon17 c.G2734T p.G912X TACCACGGACGAA 61 3 0.05 83 0 0 92 33 0 0.00 HGC6.3 0 broad.mit.edu 37 6 168376821 168376821 + RNA SNP T T C novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001129895 exon1 c.A512G p.E171G GGTCACTCCCCCT 190 3 0.02 222 1 0.0045045045 48 0 0.00 SKAP2 8935 hgsc.bcm.edu;mdanderson.org 37 7 26883702 26883702 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_003930 exon4 c.C254A p.T85N GAAATAGTGTCTG 76 4 0.05 54 0 0 21 0 0.00 RABGEF1 27342 mdanderson.org 37 7 66273943 66273943 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 RABGEF1,colon,carcinoma,+1,2 RABGEF1 NM_014504 exon9 c.G1148T p.R383L TTGATCGCTACAT 95 5 0.05 73 0 0 1 2 94 0 0.00 RP1L1 94137 ucsc.edu 37 8 10474009 10474009 + Missense_Mutation SNP G G A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . RP1L1 NM_178857 exon3 c.C698T p.A233V CTCCTGGCATTTT 43 4 0.09 42 0 0 453 0 0 HR 55806 mdanderson.org 37 8 21981246 21981246 + Missense_Mutation SNP G G T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_018411 exon6 c.C1831A p.H611N GCCAGTGGGTGTT 22 3 0.14 28 0 0 0 0 LRRCC1 85444 broad.mit.edu 37 8 86019547 86019547 + Missense_Mutation SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 LRRCC1,colon,carcinoma,0,2 LRRCC1 NM_033402 exon1 c.C17T p.A6V CGGCGGCGGTGGT 103 4 0.04 79 2 0.0253164557 212 2 4 0 0.00 SYBU 55638 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 110587804 110587804 + Silent SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_001099752 exon8 c.G1323A p.L441L ATCGAACAAATCT 153 24 0.16 133 0 0 1 0 0.00 ND4 4538 broad.mit.edu;bcgsc.ca 37 MT 11356 11356 + Missense_Mutation SNP C C T novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . ENST00000361381 exon1 c.C597T p.Y199Y AGCTTACACAATA 19 5 0.26 42 0 0 0 0 SPIN2B 474343 broad.mit.edu 37 X 57146615 57146615 + Missense_Mutation SNP T T C novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . SPIN2B NM_001006683 exon2 c.A448G p.M150V AGACCATCCCCCT 406 6 0.01 376 1 0.0026595745 11 12 0 0.00 AMMECR1 9949 mdanderson.org 37 X 109561071 109561071 + Missense_Mutation SNP C C A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_015365 exon1 c.G229T p.G77C CGCCGCCGCAGCC 50 4 0.08 36 1 0.0277777778 12 0 0.00 CSAG4 0 broad.mit.edu 37 X 151896095 151896095 + RNA SNP G G A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . CSAG4 . . . . CAGGTAGCCTTGA 93 16 0.17 92 0 0 13 1 0 0.00 PDZD4 57595 mdanderson.org 37 X 153069641 153069641 + Missense_Mutation SNP G G A novel TCGA-WZ-A8D5-01A-11D-A435-10 TCGA-WZ-A8D5-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f9769d8-ba26-4ac7-91c7-7ae0494130e7 928cb9ff-09c7-4a5f-bd42-198e31335976 . . NM_032512 exon8 c.C1477T p.R493W CCCGCCGCAGGGG 21 3 0.14 38 0 0 8 0 0.00