Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL TVaf_SOL NTotCov_SOL NVarCov_SOL NVaf_SOL dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq Ttot_rna Tvar_rna Tvaf_rna note germline-maf-frequency IGV SLC2A7 155184 mdanderson.org 37 1 9074853 9074853 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 SLC2A7,NS,carcinoma,+2,1 SLC2A7 NM_207420 exon7 c.C790A p.R264S CGGCGCGCTCGGC 33 3 0.09 38 2 0.0526315789 2 1 0 0 AHDC1 27245 mdanderson.org 37 1 27878462 27878462 + Silent SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001029882 exon6 c.C165T p.H55H GAAGGCGTGGGTG 26 2 0.08 41 0 0 5 0 0.00 WDR65 149465 mdanderson.org 37 1 43652471 43652471 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_152498 exon6 c.G1063T p.A355S CTGGTTGCCAGCA 44 3 0.07 50 0 0 2 0 0.00 TGFBR3 7049 hgsc.bcm.edu 37 1 92163669 92163669 + Missense_Mutation SNP T T C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_003243 exon15 c.A2306G p.K769R GGTTCCTTCATGC 87 4 0.05 122 0 0 14 0 0.00 NBPF10 100132406 broad.mit.edu 37 1 145293269 145293269 + Splice_Site SNP G G A rs75226570 TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . NBPF10 . . . . ACAACAGTAAGTT 31 5 0.16 29 1 0.0344827586 221 1 0 0.00 HORMAD1 84072 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 150680868 150680868 + Silent SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_032132 exon9 c.C411T p.N137N AGATTCGTTGCTT 87 37 0.43 105 0 0 0 0 NPR1 4881 mdanderson.org 37 1 153651756 153651756 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_000906 exon1 c.G172T p.A58S GGACCCGCCGTGG 10 2 0.20 15 0 0 1 0 0.00 ILDR2 387597 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 166904678 166904678 + Missense_Mutation SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_199351 exon6 c.C740T p.P247L GAGGGAGGGTACC 68 18 0.26 74 0 0 0 0 IARS2 55699 broad.mit.edu 37 1 220320874 220320874 + Missense_Mutation SNP T T C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . IARS2 NM_018060 exon23 c.T2936C p.V979A TAATTGTCATGCC 96 3 0.03 107 0 0 106 344 0 0.00 AIDA 64853 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 222849452 222849454 + In_Frame_Del DEL GTA GTA - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 GTA GTA Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . AIDA NM_022831 exon7 c.568_570del p.190_190del CTAACTGTAATAT 250 90 0.36 279 0 0 23 14 0 0.00 ZNF672 79894 mdanderson.org 37 1 249142349 249142349 + Silent SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_024836 exon4 c.C876T p.F292F GGGTTTCGGGCAG 10 2 0.20 13 0 0 54 0 0.00 ALOX5 240 broad.mit.edu;bcgsc.ca 37 10 45935962 45935962 + Missense_Mutation SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . ALOX5 NM_001256153 exon8 c.C1066T p.R356C TGGGTGCGTTCCA 92 6 0.07 149 1 0.0067114094 88 32 0 0.00 JMJD1C 221037 mdanderson.org 37 10 64928259 64928259 + Nonsense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_032776 exon25 c.C7469A p.S2490X TGAAATGACTCTA 45 3 0.07 102 0 0 60 0 0.00 DLG5 9231 mdanderson.org 37 10 79581756 79581756 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_004747 exon15 c.C2486A p.A829D TTATGAGCCTGGA 45 3 0.07 57 0 0 55 0 0.00 ITPRIP 85450 mdanderson.org 37 10 106075100 106075100 + Missense_Mutation SNP C C T rs150063098 bycluster;by1000genomes TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001272013 exon2 c.G710A p.R237H CCCTGGCGATCCA 42 3 0.07 62 0 0 0 7 0 0.00 OR6A2 8590 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 6816325 6816325 + Silent SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_003696 exon1 c.C615T p.F205F CAGGATGAAATCT 56 29 0.52 42 0 0 0 0 LMO1 4004 mdanderson.org 37 11 8252027 8252027 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_002315 exon2 c.C50A p.P17H CCTTTGGGCTGGA 49 3 0.06 43 0 0 0 0 TRIM44 54765 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 35684815 35684815 + Missense_Mutation SNP C C A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_017583 exon1 c.C156A p.F52L GAAGTTCCTCAGT 51 17 0.33 44 0 0 41 8 0.20 RTN4RL2 349667 mdanderson.org 37 11 57244302 57244302 + Missense_Mutation SNP C C G novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_178570 exon3 c.C1181G p.P394R CGCCCCCGGACTC 20 3 0.15 13 0 0 5 0 0.00 DAK 26007 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 61111415 61111415 + Missense_Mutation SNP C C A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_015533 exon12 c.C1070A p.P357H CCGAGCCCCAGGA 32 15 0.47 25 0 0 102 68 0.67 CHRM1 1128 mdanderson.org 37 11 62677783 62677783 + Missense_Mutation SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_000738 exon2 c.C790T p.R264W GGGCCCGGCAGCA 51 4 0.08 41 0 0 0 0 ANO1 55107 broad.mit.edu 37 11 69951865 69951865 + Missense_Mutation SNP T T C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 ANO1_ENST00000355303,NS,carcinoma,0,2 ANO1 NM_018043 exon5 c.T718C p.F240L GATTCCTTTTTCG 118 3 0.03 145 0 0 156 2 1 0 0.00 MAML2 84441 broad.mit.edu;mdanderson.org 37 11 95825254 95825254 + Silent SNP C C T rs61749250 bycluster TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 MAML2,caecum,carcinoma,0,2 MAML2 NM_032427 exon2 c.G1941A p.Q647Q CTGCTGCTGTTGT 74 4 0.05 63 1 0.0158730159 94 2 12 0 0.00 GRIA4 2893 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 105797664 105797664 + Missense_Mutation SNP G G C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001077243 exon13 c.G2045C p.R682T TCTTCAGAGTAAG 88 27 0.31 96 0 0 0 0 BCO2 83875 mdanderson.org 37 11 112050195 112050195 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001256398 exon2 c.G283T p.G95W GAGTTTGGGAAGG 41 3 0.07 58 0 0 1 0 0.00 DSCAML1 57453 mdanderson.org 37 11 117376428 117376428 + Silent SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_020693 exon9 c.C1983A p.P661P TTCGAAGGGCTGG 15 3 0.20 20 0 0 15 0 0.00 RBP5 0 broad.mit.edu 37 12 7281645 7281674 + RNA DEL TTCCTGAGGAAGGAACCTGGAGCAGGATCC TTCCTGAGGAAGGAACCTGGAGCAGGATCC - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 TTCCTGAGGAAGGAACCTGGAGCAGGATCC TTCCTGAGGAAGGAACCTGGAGCAGGATCC Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . RBP5 . . . . TGGCTTTTCCTGA 7 2 0.29 7 0 0 20 35 0 0.00 UTP20 27340 mdanderson.org 37 12 101763632 101763632 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_014503 exon49 c.G6518T p.R2173M CCGCCAGGGGCCA 46 3 0.07 57 0 0 35 0 0.00 RPLP0 6175 hgsc.bcm.edu;bcgsc.ca 37 12 120634676 120634690 + In_Frame_Del DEL GTGGCAGCAGCCACA GTGGCAGCAGCCACA - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 GTGGCAGCAGCCACA GTGGCAGCAGCCACA Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . RPLP0 NM_053275 exon8 c.841_855del p.281_285del GCTGTGGTGGCAG 211 59 0.28 225 0 0 27 4632 0 0.00 LAMP1 3916 mdanderson.org 37 13 113965084 113965084 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_005561 exon4 c.G464T p.C155F ACAGATGTGTTAG 38 3 0.08 57 0 0 522 0 0.00 RPGRIP1 57096 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 21798426 21798426 + Missense_Mutation SNP T T C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_020366 exon19 c.T3118C p.W1040R ACTGAGTGGAAGT 35 16 0.46 50 0 0 0 0 PRKCH 5583 mdanderson.org 37 14 62016448 62016448 + Nonsense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_006255 exon14 c.G1951T p.E651X ATAAAGGAAGAGC 27 3 0.11 64 0 0 11 0 0.00 PLEKHH1 57475 mdanderson.org 37 14 68024067 68024067 + Nonsense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_020715 exon4 c.G271T p.E91X TACCAAGAATTGC 33 3 0.09 39 0 0 17 0 0.00 ZDHHC22 283576 broad.mit.edu 37 14 77600225 77600225 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . ZDHHC22 NM_174976 exon3 c.C593A p.A198D GCGCAGGCCAGGC 72 6 0.08 87 0 0 30 0 0 DLK1 8788 ucsc.edu;bcgsc.ca 37 14 101195284 101195284 + Missense_Mutation SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . DLK1 NM_003836 exon3 c.G143A p.G48D AGCCTGGCTGGCA 36 4 0.11 42 0 0 57 13 0 0.00 HERC2P9 0 broad.mit.edu 37 15 28929626 28929634 + RNA DEL GAAGAGCGG GAAGAGCGG - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 GAAGAGCGG GAAGAGCGG Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . . . . . GACTGTGAAGAGC 7 2 0.29 7 0 0 50 0 0.00 . 388112 bcgsc.ca 37 15 35377147 35377147 + RNA SNP A A G novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 A A Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . . . . . GGAGGAAGGAAGA 92 19 0.21 82 2 0.0243902439 0 0 PPP1R14D 54866 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 15 41108371 41108371 + Nonsense_Mutation SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001130143 exon3 c.G452A p.W151X TACCTCCAGCTGA 68 26 0.38 89 0 0 0 0 CCDC64B 146439 mdanderson.org 37 16 3080740 3080740 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001103175 exon3 c.C572A p.A191D GCTCCAGCCAGTG 42 3 0.07 42 0 0 21 0 0.00 LOC100271836 0 broad.mit.edu 37 16 21469994 21469994 + RNA DEL A A - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . . . . . TACATTAAAAAAA 60 8 0.13 40 0 0 0 0 PKD1L2 114780 broad.mit.edu 37 16 81155069 81155069 + RNA DEL A A - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . PKD1L2 . . . . CATCTCAAAAAAA 12 3 0.25 11 0 0 361 0 0 KDM6B 23135 mdanderson.org 37 17 7751802 7751802 + Silent SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 KDM6B,NS,carcinoma,+2,1 KDM6B NM_001080424 exon11 c.G2196T p.L732L ATCTCTGCAGTCT 29 3 0.10 46 0 0 2 1 32 0 0.00 MRM1 79922 mdanderson.org 37 17 34958334 34958334 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_024864 exon1 c.G95T p.G32V CTGGTGGGGAGGA 22 3 0.14 33 0 0 35 0 0.00 HEXIM2 124790 mdanderson.org 37 17 43246847 43246847 + Missense_Mutation SNP A A T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_144608 exon4 c.A532T p.S178C GGGGACAGTGATG 41 3 0.07 80 0 0 56 0 0.00 AP3D1 8943 mdanderson.org 37 19 2102188 2102188 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001261826 exon32 c.C3632A p.T1211K GCCAGCGTCGCCT 44 3 0.07 64 0 0 431 0 0.00 DOHH 83475 mdanderson.org 37 19 3491805 3491805 + Silent SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001145165 exon5 c.G594A p.L198L ACAGTGCAGACCT 25 3 0.12 45 0 0 44 0 0.00 TBXA2R 6915 mdanderson.org 37 19 3600390 3600390 + Silent SNP G G T rs5745 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001060 exon2 c.C243A p.T81T GGTACCGGTCACC 48 3 0.06 57 0 0 2 0 0.00 CD97 976 mdanderson.org 37 19 14512474 14512474 + Missense_Mutation SNP T T C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_078481 exon11 c.T1085C p.L362P TGACCCTGATGAT 44 3 0.07 71 0 0 30 0 0.00 ZNF253 56242 broad.mit.edu 37 19 20003204 20003204 + Missense_Mutation SNP T T C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . ZNF253 NM_021047 exon4 c.T1148C p.L383P CAACCCTTTTTTC 78 3 0.04 124 1 0.0080645161 99 20 0 0.00 CAPNS1 826 bcgsc.ca 37 19 36632054 36632054 + Silent SNP C C T rs17879825 TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . CAPNS1 NM_001749 exon2 c.C141T p.G47G CGGCGGCGGTGGT 104 8 0.08 139 2 0.0143884892 19 3 0 0.00 FCGBP 8857 mdanderson.org 37 19 40433368 40433368 + Missense_Mutation SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 FCGBP,colon,carcinoma,0,1 FCGBP NM_003890 exon2 c.C901T p.P301S AGGATGGCCGGAC 31 3 0.10 32 0 0 0 1 3 0 0.00 HSD17B14 51171 mdanderson.org 37 19 49337583 49337583 + Missense_Mutation SNP G G A rs11547571 alternate_allele TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_016246 exon3 c.C160T p.P54S CTCCAGGGAGCTC 36 3 0.08 41 0 0 233 0 0.00 SIGLEC10 89790 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 51919248 51919248 + Silent SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . SIGLEC10 NM_001171157 exon5 c.C928T p.L310L CGGGCAGCTCCAG 82 13 0.16 112 0 0 112 6 0 0.00 ZNF320 162967 mdanderson.org 37 19 53384632 53384632 + Missense_Mutation SNP C C A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_207333 exon4 c.G747T p.E249D GCCACACTCATTA 47 3 0.06 86 1 0.011627907 20 0 0.00 ZNF772 400720 hgsc.bcm.edu;mdanderson.org 37 19 57984888 57984888 + Nonsense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001024596 exon5 c.C1224A p.C408X TGCGATGCACTCA 65 15 0.23 88 0 0 1 0 0.00 ATAD2B 54454 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 24080341 24080341 + Missense_Mutation SNP A A C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001242338 exon13 c.T1512G p.F504L TTCATCAAAAAAT 437 134 0.31 371 0 0 1 0 0.00 USP39 10713 mdanderson.org 37 2 85866488 85866488 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001256725 exon9 c.G1258T p.A420S ATCCTGGCTAAGT 55 4 0.07 60 0 0 431 0 0.00 . 400986 broad.mit.edu 37 2 96646519 96646519 + Missense_Mutation SNP T T A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 ENSG00000174501,NS,carcinoma,0,2 . . . . . ACAGCATGTATGA 160 6 0.04 157 0 0 2 0 0 PLEKHA3 65977 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 2 179355457 179355467 + Frame_Shift_Del DEL AATGCAGCTGA AATGCAGCTGA - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 AATGCAGCTGA AATGCAGCTGA Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . PLEKHA3 NM_019091 exon3 c.228_238del p.76_80del GCAGTGAATGCAG 162 48 0.30 228 0 0 25 10 0 0.00 OBSL1 23363 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 220416900 220416900 + Missense_Mutation SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 OBSL1_ENST00000404537,NS,carcinoma,0,1 OBSL1_ENST00000404537 NM_015311 exon19 c.G5347A p.E1783K CGTCCTCGGCGCG 187 76 0.41 239 0 0 0 1 10 4 0.40 MACROD2 140733 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 13982939 13982939 + Missense_Mutation SNP T T G novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_080676 exon2 c.T52G p.L18V GAACGTTTATTGA 76 15 0.20 72 0 0 1 0 0.00 LAMA5 3911 ucsc.edu;bcgsc.ca 37 20 60892038 60892038 + Missense_Mutation SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . LAMA5 NM_005560 exon56 c.C7553T p.A2518V TCGATGGCCCTCT 28 4 0.14 46 0 0 268 130 0 0.00 ZNF512B 57473 mdanderson.org 37 20 62594010 62594010 + Missense_Mutation SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_020713 exon13 c.C2093T p.A698V TCCTCCGCTATCT 38 3 0.08 49 0 0 49 0 0.00 BAGE 85319 broad.mit.edu 37 21 11058603 11058603 + RNA DEL G G - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . . . . . CCTAAAGATTTTT 12 5 0.42 6 0 0 0 0 . 0 broad.mit.edu 37 22 18842615 18842615 + RNA DEL T T - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . . . . . TATTTATTTTAGA 6 2 0.33 5 0 0 0 0 . 0 broad.mit.edu 37 22 20976583 20976584 + RNA INS - - A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . . . . . TTTGCCTAAAAAA 7 4 0.57 4 0 0 0 0 VPREB3 29802 mdanderson.org 37 22 24095309 24095309 + Silent SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_013378 exon2 c.C126A p.L42L GGGGCTGAGCGTG 43 3 0.07 55 0 0 1 0 0.00 SLC5A4 6527 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 32628901 32628901 + Missense_Mutation SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_014227 exon9 c.C1006T p.R336C GGATGCGGCTGAT 144 51 0.35 159 0 0 0 0 ADSL 158 mdanderson.org 37 22 40759064 40759064 + Missense_Mutation SNP G G A rs370851726 TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 ADSL_ENST00000216194,NS,carcinoma,0,2 ADSL_ENST00000216194 NM_001123378 exon10 c.G1090A p.V364M TTGGTCGTGTACC 46 3 0.07 63 0 0 0 2 493 0 0.00 DLEC1 9940 mdanderson.org 37 3 38103804 38103804 + Missense_Mutation SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_007335 exon4 c.G818A p.S273N TGGACAGCCTGAC 42 3 0.07 41 0 0 4 0 0.00 GMPPB 29925 mdanderson.org 37 3 49759234 49759234 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_013334 exon8 c.C1115A p.P372H TTGTGGGGCAGCA 40 3 0.08 41 0 0 208 0 0.00 GPR78 27201 mdanderson.org 37 4 8582800 8582800 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_080819 exon1 c.G91T p.A31S TGTTGCGCCTACA 26 3 0.12 27 1 0.037037037 19 0 0.00 BOD1L1 259282 mdanderson.org 37 4 13629060 13629060 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_148894 exon1 c.C152A p.P51Q AGCTGCGGGTCCC 19 3 0.16 19 0 0 0 0 . 0 bcgsc.ca 37 4 49553004 49553004 + RNA SNP T T C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . . . . . AGCAGTTAAACAA 72 10 0.14 86 2 0.023255814 0 0 KIAA0947 23379 mdanderson.org 37 5 5464309 5464309 + Missense_Mutation SNP T T C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_015325 exon13 c.T4862C p.L1621P ACACACTGAGTAA 34 3 0.09 43 0 0 27 0 0.00 AMACR 23600 broad.mit.edu 37 5 34004802 34004802 + Silent SNP C C A rs368427062 alternate_allele TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . AMACR NM_014324 exon3 c.G429T p.P143P GGCATACGGATTC 376 5 0.01 483 0 0 38 33 0 0.00 FEM1C 56929 mdanderson.org 37 5 114860256 114860256 + Missense_Mutation SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_020177 exon3 c.G1603A p.A535T GAGCAGCGATATG 68 4 0.06 71 0 0 21 0 0.00 PCDHGA12 26025 mdanderson.org 37 5 140812465 140812465 + Silent SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_003735 exon1 c.G2139A p.A713A GCTGGCGCTCAGG 71 4 0.06 103 0 0 1 0 0.00 DPCR1 135656 mdanderson.org 37 6 30919170 30919170 + Missense_Mutation SNP T T C novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_080870 exon2 c.T2929C p.S977P CCATCCTCAGCAG 43 3 0.07 59 0 0 2 0 0.00 HSP90AB1 3326 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 6 44218796 44218798 + In_Frame_Del DEL AGA AGA - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 AGA AGA Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . HSP90AB1 NM_001271969 exon7 c.968_970del p.323_324del TTCTGTAGAAGGT 109 45 0.41 94 0 0 83 3495 0 0.00 TMEM184A 202915 mdanderson.org 37 7 1586698 1586698 + Missense_Mutation SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001097620 exon9 c.G1132A p.A378T GCGTGGCCTGCTG 39 3 0.08 27 0 0 23 0 0.00 LRCH4 4034 mdanderson.org 37 7 100174944 100174944 + Missense_Mutation SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_002319 exon11 c.G1247A p.R416Q TGCCGCCGTTCCC 11 2 0.18 14 1 0.0714285714 101 0 0.00 ING3 54556 broad.mit.edu;mdanderson.org 37 7 120609078 120609078 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 ING3,NS,carcinoma,0,1 ING3 NM_019071 exon9 c.G728T p.R243L AGGGACGAAGAAC 81 4 0.05 60 0 0 36 1 35 0 0.00 DLGAP2 9228 mdanderson.org 37 8 1626714 1626714 + Silent SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_004745 exon9 c.C2383T p.L795L AAGCTGCTGCACG 22 3 0.14 48 0 0 0 0 FAM66E 0 broad.mit.edu 37 8 7829133 7829134 + RNA DEL TG TG - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 TG TG Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . . . . . TGTGTTTGTGTGT 10 3 0.30 25 2 0.08 0 0 MFHAS1 9258 bcgsc.ca 37 8 8750409 8750409 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . MFHAS1 NM_004225 exon1 c.C160A p.P54T GCTGGGGGGAGGC 41 4 0.10 60 0 0 58 2 0 0.00 GSR 2936 mdanderson.org 37 8 30539555 30539555 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_000637 exon11 c.C1177A p.L393I GGGCAAGTTTTCG 45 3 0.07 54 0 0 115 0 0.00 TEX15 56154 mdanderson.org 37 8 30704648 30704648 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_031271 exon1 c.C1886A p.S629Y TCAGAAGAACAAG 40 3 0.08 91 0 0 0 0 RGS22 26166 broad.mit.edu 37 8 100990176 100990177 + Frame_Shift_Ins INS - - G novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . RGS22 NM_015668 exon23 c.3488_3489insC p.L1163fs ACTGCCAATTTTT 368 18 0.05 395 1 0.0025316456 319 1 0 0.00 FBXO10 26267 broad.mit.edu 37 9 37516034 37516034 + Missense_Mutation SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 FBXO10,NS,carcinoma,0,1 FBXO10 NM_012166 exon10 c.C2563T p.R855W GGCCCCGCACGGC 116 4 0.03 132 0 0 75 1 28 0 0.00 C9orf84 158401 bcgsc.ca;mdanderson.org 37 9 114480523 114480523 + Missense_Mutation SNP A A G novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 A A Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . C9orf84 NM_173521 exon14 c.T1985C p.L662S AGATGTAAGAGAG 41 4 0.10 74 0 0 207 0 0 CDK5RAP2 55755 mdanderson.org 37 9 123215780 123215780 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_018249 exon21 c.C2747A p.P916H CACCCAGGCACCC 45 4 0.09 53 0 0 48 0 0.00 ENTPD8 377841 mdanderson.org 37 9 140329512 140329512 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_001033113 exon10 c.C1342A p.L448M CGGTCAGGTTCAG 42 3 0.07 32 0 0 3 0 0.00 RNR1 6052 hgsc.bcm.edu 37 MT 983 983 + RNA SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . . . . . AACTCACCTGAGT 20 12 0.60 39 0 0 0 0 AKAP17A 8227 mdanderson.org 37 X 1719834 1719834 + Missense_Mutation SNP G G T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_005088 exon5 c.G1435T p.V479L GGCTGTGTGAGCG 19 2 0.11 39 0 0 86 0 0.00 TAB3 257397 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 30870899 30870899 + Missense_Mutation SNP G G A novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_152787 exon7 c.C1706T p.P569L ACCGTAGGGATCG 60 9 0.15 40 0 0 15 1 0.07 OPHN1 4983 mdanderson.org 37 X 67333029 67333029 + Missense_Mutation SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_002547 exon17 c.G1414A p.A472T TGGCAGCAGAGAC 32 3 0.09 26 0 0 2 0 0.00 KIAA2022 340533 broad.mit.edu 37 X 73962573 73962573 + Frame_Shift_Del DEL A A - novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . KIAA2022 NM_001008537 exon3 c.1819delT p.S607fs TTTGGGAAAAAGG 128 7 0.05 87 0 0 262 0 0 ZFY 7544 mdanderson.org 37 Y 2829598 2829598 + Missense_Mutation SNP C C T novel TCGA-2G-AAGT-01A-11D-A42Y-10 TCGA-2G-AAGT-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 980913b0-79a2-4582-993d-61a244cf931f f4d496a2-1051-4956-a38a-5992eea441c2 . . NM_003411 exon3 c.C545T p.A182V ACTGTGCCCCTGA 35 3 0.09 37 0 0 9 0 0.00