Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
FRRS1	0	genome.wustl.edu	37	1	100195232	100195232	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	100195232	100195232	G	A	SNP	FRRS1	ENST00000287474	human	ensembl	74_37	-1	known	nonsense	c.832	p.R278*	1.000	pfam_DOMON_domain,smart_DOMON_domain,pfscan_DOMON_domain	pfam_Reeler_dom,pfam_DOMON_domain,smart_DOMON_domain,smart_Cyt_b561/ferric_Rdtase_TM,pfscan_DOMON_domain,pfscan_Reeler_dom,pfscan_Cyt_b561/ferric_Rdtase_TM	-	no_errors	FRRS1	HGNC	ENSG00000156869				45	0	0	25	5	16.6667
CASZ1	0	genome.wustl.edu	37	1	10708045	10708045	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	10708045	10708045	C	T	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	missense	c.3310	p.A1104T	0.056	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940				43	0	0	33	9	21.4286
CELSR2	0	genome.wustl.edu	37	1	109811556	109811556	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	109811556	109811556	G	A	SNP	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	missense	c.6557	p.R2186H	1.000	pfam_DUF3497	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126				107	0	0	97	21	17.7966
STRIP1	0	genome.wustl.edu	37	1	110586300	110586300	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	110586300	110586300	C	T	SNP	STRIP1	ENST00000369795	human	ensembl	74_37	+1	known	missense	c.1108	p.R370W	1.000	NULL	pfam_DUF3402,pfam_N1221	-	no_errors	STRIP1	HGNC	ENSG00000143093				40	0	0	28	13	31.7073
KCNA10	0	genome.wustl.edu	37	1	111060754	111060754	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	111060754	111060754	G	A	SNP	KCNA10	ENST00000369771	human	ensembl	74_37	-1	known	missense	c.656	p.A219V	1.000	prints_K_chnl,prints_K_chnl_volt-dep_Kv1	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA10	HGNC	ENSG00000143105				71	0	0	60	32	34.7826
EXOSC10	0	genome.wustl.edu	37	1	11151609	11151609	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	11151609	11151609	G	A	SNP	EXOSC10	ENST00000376936	human	ensembl	74_37	-1	known	missense	c.418	p.P140S	1.000	NULL	pfam_3'-5'_exonuclease_dom,pfam_Exosome-assoc_fac_Rrp6_N,pfam_HRDC_dom,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_HRDC_dom,pfscan_HRDC_dom	-	no_errors	EXOSC10	HGNC	ENSG00000171824				92	0	0	43	12	21.8182
MOV10	0	genome.wustl.edu	37	1	113239384	113239384	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	113239384	113239384	G	A	SNP	MOV10	ENST00000357443	human	ensembl	74_37	+1	known	missense	c.2114	p.R705Q	1.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	MOV10	HGNC	ENSG00000155363				15	0	0	12	7	36.8421
AP4B1	0	genome.wustl.edu	37	1	114442915	114442915	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	114442915	114442915	C	A	SNP	AP4B1	ENST00000256658	human	ensembl	74_37	-1	known	missense	c.725	p.S242I	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP_complex_bsu_1_2_4	pfam_Clathrin/coatomer_adapt-like_N,pfam_B-adaptin_app_sub_C,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,pirsf_AP_complex_bsu_1_2_4	-	no_errors	AP4B1	HGNC	ENSG00000134262				100	0	0	42	18	30
TRIM33	0	genome.wustl.edu	37	1	114969847	114969847	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	114969847	114969847	G	A	SNP	TRIM33	ENST00000358465	human	ensembl	74_37	-1	known	missense	c.1372	p.R458C	1.000	NULL	pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	TRIM33	HGNC	ENSG00000197323				120	0	0	65	41	38.6792
IGSF3	0	genome.wustl.edu	37	1	117146584	117146584	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	117146584	117146584	C	T	SNP	IGSF3	ENST00000318837	human	ensembl	74_37	-1	known	missense	c.1346	p.R449H	1.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF3	HGNC	ENSG00000143061				66	0	0	86	6	6.52174
TRIM45	0	genome.wustl.edu	37	1	117663484	117663484	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	117663484	117663484	C	T	SNP	TRIM45	ENST00000256649	human	ensembl	74_37	-1	known	missense	c.340	p.D114N	1.000	NULL	pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM45	HGNC	ENSG00000134253				45	0	0	45	19	29.6875
FAM46C	0	genome.wustl.edu	37	1	118165698	118165698	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	118165698	118165698	C	T	SNP	FAM46C	ENST00000369448	human	ensembl	74_37	+1	known	missense	c.208	p.R70W	1.000	pfam_DUF1693	pfam_DUF1693	-	no_errors	FAM46C	HGNC	ENSG00000183508				98	0	0	72	42	36.8421
UBE2J2	0	genome.wustl.edu	37	1	1192466	1192466	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	1192466	1192466	G	A	SNP	UBE2J2	ENST00000400930	human	ensembl	74_37	-1	known	missense	c.368	p.P123L	0.999	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2J2	HGNC	ENSG00000160087				126	0	0	152	8	5
WARS2	0	genome.wustl.edu	37	1	119575804	119575804	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	119575804	119575804	G	A	SNP	WARS2	ENST00000235521	human	ensembl	74_37	-1	known	silent	c.813	p.G271	0.242	pfam_aa-tRNA-synth_Ic,tigrfam_Trp-tRNA-ligase	pfam_aa-tRNA-synth_Ic,prints_Trp-tRNA-ligase,tigrfam_Trp-tRNA-ligase	-	no_errors	WARS2	HGNC	ENSG00000116874				102	0	0	66	47	41.5929
ZNF697	0	genome.wustl.edu	37	1	120165709	120165709	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	120165709	120165709	G	A	SNP	ZNF697	ENST00000421812	human	ensembl	74_37	-1	known	silent	c.1257	p.S419	0.999	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF697	HGNC	ENSG00000143067				13	0	0	9	6	40
NOTCH2	0	genome.wustl.edu	37	1	120471712	120471712	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	120471712	120471712	C	T	SNP	NOTCH2	ENST00000256646	human	ensembl	74_37	-1	known	missense	c.3779	p.R1260H	0.985	pirsf_Notch,pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,pfam_EGF_extracell,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_2,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH2	HGNC	ENSG00000134250				73	0	0	42	19	31.1475
NOTCH2	0	genome.wustl.edu	37	1	120478152	120478152	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	120478152	120478152	C	A	SNP	NOTCH2	ENST00000256646	human	ensembl	74_37	-1	known	missense	c.3598	p.G1200C	1.000	pirsf_Notch,pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,pfam_EGF_extracell,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_2,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH2	HGNC	ENSG00000134250				115	0	0	112	49	30.4348
AURKAIP1	0	genome.wustl.edu	37	1	1309472	1309472	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	1309472	1309472	G	A	SNP	AURKAIP1	ENST00000321751	human	ensembl	74_37	-1	known	missense	c.406	p.R136W	1.000	pfam_DUF1713_mit	pfam_DUF1713_mit	-	no_errors	AURKAIP1	HGNC	ENSG00000175756				119	0	0	80	42	34.4262
ENSG00000223804	0	genome.wustl.edu	37	1	143744203	143744203	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	143744203	143744203	G	A	SNP	ENSG00000223804	ENST00000418192	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP6-206I17.1	Clone_based_vega_gene	ENSG00000223804				33	0	0	37	8	17.7778
KAZN	0	genome.wustl.edu	37	1	14925519	14925519	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	14925519	14925519	C	T	SNP	KAZN	ENST00000376030	human	ensembl	74_37	+1	known	missense	c.26	p.A9V	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	KAZN	HGNC	ENSG00000189337				76	0	0	49	27	35.5263
KAZN	0	genome.wustl.edu	37	1	14925623	14925623	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	14925623	14925623	G	A	SNP	KAZN	ENST00000376030	human	ensembl	74_37	+1	known	missense	c.130	p.G44S	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	KAZN	HGNC	ENSG00000189337				26	0	0	18	14	43.75
HIST2H2BE	0	genome.wustl.edu	37	1	149858090	149858090	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	149858090	149858090	C	T	SNP	HIST2H2BE	ENST00000369155	human	ensembl	74_37	-1	known	missense	c.101	p.R34H	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST2H2BE	HGNC	ENSG00000184678				236	0	0	253	29	10.2837
MTMR11	0	genome.wustl.edu	37	1	149903117	149903117	+	RNA	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	149903117	149903117	A	G	SNP	MTMR11	ENST00000490310	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				56	0	0	38	23	37.7049
ADAMTSL4	0	genome.wustl.edu	37	1	150529506	150529506	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	150529506	150529506	C	T	SNP	ADAMTSL4	ENST00000369039	human	ensembl	74_37	+1	known	missense	c.1910	p.P637L	0.000	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL4	HGNC	ENSG00000143382				178	1	0.558659	121	61	33.5165
TMOD4	0	genome.wustl.edu	37	1	151143409	151143409	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	151143409	151143409	C	T	SNP	TMOD4	ENST00000295314	human	ensembl	74_37	-1	known	missense	c.857	p.R286H	0.998	NULL	pfam_Tropomodulin	-	no_errors	TMOD4	HGNC	ENSG00000163157				34	0	0	39	11	22
POGZ	0	genome.wustl.edu	37	1	151378254	151378254	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	151378254	151378254	C	T	SNP	POGZ	ENST00000271715	human	ensembl	74_37	-1	known	missense	c.3257	p.R1086Q	0.821	pfam_HTH_CenpB_DNA-bd_dom	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_Znf_C2H2	-	no_errors	POGZ	HGNC	ENSG00000143442				115	0	0	55	30	35.2941
RORC	0	genome.wustl.edu	37	1	151787739	151787739	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	151787739	151787739	G	A	SNP	RORC	ENST00000392697	human	ensembl	74_37	-1	known	missense	c.623	p.P208L	0.961	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_ROR_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	RORC	HGNC	ENSG00000143365				56	0	0	25	19	43.1818
FLG	0	genome.wustl.edu	37	1	152281748	152281748	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	152281748	152281748	T	C	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.5614	p.K1872E	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				486	0	0	353	200	36.1664
KAZN	0	genome.wustl.edu	37	1	15361377	15361377	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	15361377	15361377	G	A	SNP	KAZN	ENST00000376030	human	ensembl	74_37	+1	known	missense	c.551	p.R184H	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	KAZN	HGNC	ENSG00000189337				84	0	0	77	22	22.2222
INTS3	0	genome.wustl.edu	37	1	153723704	153723704	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	153723704	153723704	C	T	SNP	INTS3	ENST00000318967	human	ensembl	74_37	+1	known	missense	c.718	p.L240F	1.000	NULL	pfam_Int_cplx_su3	-	no_errors	INTS3	HGNC	ENSG00000143624				74	0	0	44	13	22.807
TPM3	0	genome.wustl.edu	37	1	154145590	154145590	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	154145590	154145590	A	G	SNP	TPM3	ENST00000368530	human	ensembl	74_37	-1	known	silent	c.465	p.I155	1.000	pfam_Tropomyosin,prints_Tropomyosin	pfam_Tropomyosin,prints_Tropomyosin	-	no_errors	TPM3	HGNC	ENSG00000143549				112	0	0	60	20	25
THBS3	0	genome.wustl.edu	37	1	155175055	155175055	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	155175055	155175055	C	T	SNP	THBS3	ENST00000368378	human	ensembl	74_37	-1	known	silent	c.339	p.Q113	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS3	HGNC	ENSG00000169231				64	0	0	47	23	32.8571
CLK2	0	genome.wustl.edu	37	1	155239353	155239353	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	155239353	155239353	G	A	SNP	CLK2	ENST00000368361	human	ensembl	74_37	-1	known	missense	c.325	p.R109C	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CLK2	HGNC	ENSG00000176444				162	0	0	163	14	7.9096
PMF1-BGLAP	0	genome.wustl.edu	37	1	156206136	156206136	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	156206136	156206136	G	A	SNP	PMF1-BGLAP	ENST00000490491	human	ensembl	74_37	+1	known	silent	c.426	p.L142	0.998	pfam_Nnf1	pfam_Nnf1	-	no_errors	PMF1-BGLAP	HGNC	ENSG00000260238				138	0	0	89	44	33.0827
PMF1-BGLAP	0	genome.wustl.edu	37	1	156206232	156206232	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	156206232	156206232	G	T	SNP	PMF1-BGLAP	ENST00000368276	human	ensembl	74_37	+1	known	missense	c.461	p.R154M	0.810	NULL	pfam_Nnf1	-	no_errors	PMF1-BGLAP	HGNC	ENSG00000260238				43	0	0	29	10	25.641
ARHGEF11	0	genome.wustl.edu	37	1	156926334	156926334	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	156926334	156926334	T	C	SNP	ARHGEF11	ENST00000368194	human	ensembl	74_37	-1	known	missense	c.1549	p.N517D	1.000	pfam_RGS-like_dom,superfamily_Regulat_G_prot_signal_superfam	pfam_RGS-like_dom,pfam_DH-domain,pfam_PDZ,pfam_RGS_dom,superfamily_DH-domain,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_Regulat_G_prot_signal_superfam,smart_DH-domain,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_DH-domain	-	no_errors	ARHGEF11	HGNC	ENSG00000132694				148	1	0.671141	79	54	40.6015
OR6K6	0	genome.wustl.edu	37	1	158724836	158724836	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	158724836	158724836	C	A	SNP	OR6K6	ENST00000368144	human	ensembl	74_37	+1	known	silent	c.231	p.I77	0.575	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6K6	HGNC	ENSG00000180433				193	0	0	101	53	34.4156
CCDC19	0	genome.wustl.edu	37	1	159846512	159846512	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	159846512	159846512	C	T	SNP	CCDC19	ENST00000368099	human	ensembl	74_37	-1	known	missense	c.1186	p.E396K	1.000	NULL	NULL	-	no_errors	CCDC19	HGNC	ENSG00000213085				55	0	0	22	25	53.1915
ATP1A4	0	genome.wustl.edu	37	1	160143949	160143949	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	160143949	160143949	G	C	SNP	ATP1A4	ENST00000368081	human	ensembl	74_37	+1	known	missense	c.2040	p.Q680H	0.001	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A4	HGNC	ENSG00000132681				76	0	0	61	4	6.15385
UFC1	0	genome.wustl.edu	37	1	161127526	161127526	+	RNA	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	161127526	161127526	A	G	SNP	UFC1	ENST00000473766	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	UFC1	HGNC	ENSG00000143222				32	0	0	14	13	48.1481
PPOX	0	genome.wustl.edu	37	1	161136683	161136683	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	161136683	161136683	G	A	SNP	PPOX	ENST00000352210	human	ensembl	74_37	+1	known	missense	c.46	p.A16T	1.000	pfam_Amino_oxidase,tigrfam_Protoporphyrinogen_oxidase	pfam_Amino_oxidase,tigrfam_Protoporphyrinogen_oxidase	-	no_errors	PPOX	HGNC	ENSG00000143224				65	0	0	53	38	41.7582
HSPA6	0	genome.wustl.edu	37	1	161495244	161495244	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	161495244	161495244	C	T	SNP	HSPA6	ENST00000309758	human	ensembl	74_37	+1	known	missense	c.796	p.R266C	0.998	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA6	HGNC	ENSG00000173110				20	0	0	18	18	50
CDK11A	0	genome.wustl.edu	37	1	1635564	1635564	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	1635564	1635564	G	A	SNP	CDK11A	ENST00000404249	human	ensembl	74_37	-1	known	missense	c.1708	p.R570W	0.203	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK11A	HGNC	ENSG00000008128				36	0	0	22	11	33.3333
CLCNKB	0	genome.wustl.edu	37	1	16375585	16375585	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	16375585	16375585	G	T	SNP	CLCNKB	ENST00000375667	human	ensembl	74_37	+1	known	missense	c.119	p.R40M	0.000	NULL	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated	-	no_errors	CLCNKB	HGNC	ENSG00000184908				109	0	0	75	6	7.40741
EPHA2	0	genome.wustl.edu	37	1	16458280	16458280	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	16458280	16458280	C	T	SNP	EPHA2	ENST00000358432	human	ensembl	74_37	-1	known	missense	c.2411	p.G804D	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627				68	0	0	34	24	41.3793
RSG1	0	genome.wustl.edu	37	1	16559403	16559403	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	16559403	16559403	G	A	SNP	RSG1	ENST00000375599	human	ensembl	74_37	-1	known	silent	c.375	p.F125	0.999	pfam_MIRO-like,pfam_Small_GTPase,superfamily_P-loop_NTPase	pfam_MIRO-like,pfam_Small_GTPase,superfamily_P-loop_NTPase,prints_Small_GTPase	-	no_errors	RSG1	HGNC	ENSG00000132881				127	0	0	109	41	27.3333
RCSD1	0	genome.wustl.edu	37	1	167654689	167654689	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	167654689	167654689	C	T	SNP	RCSD1	ENST00000367854	human	ensembl	74_37	+1	known	missense	c.140	p.P47L	1.000	NULL	pfam_RCSD	-	no_errors	RCSD1	HGNC	ENSG00000198771				85	0	0	48	29	37.6623
CROCCP3	0	genome.wustl.edu	37	1	16803434	16803434	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	16803434	16803434	C	T	SNP	CROCCP3	ENST00000263511	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CROCCP3	HGNC	ENSG00000080947				25	0	0	16	11	40.7407
GPR161	0	genome.wustl.edu	37	1	168054942	168054942	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	168054942	168054942	C	T	SNP	GPR161	ENST00000537209	human	ensembl	74_37	-1	known	missense	c.1477	p.E493K	1.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR161	HGNC	ENSG00000143147				117	0	0	62	44	41.5094
CROCCP3	0	genome.wustl.edu	37	1	16810917	16810917	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	16810917	16810917	G	A	SNP	CROCCP3	ENST00000263511	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.912	-	-	-	no_errors	CROCCP3	HGNC	ENSG00000080947				12	0	0	11	9	45
KIFAP3	0	genome.wustl.edu	37	1	169923216	169923216	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	169923216	169923216	C	T	SNP	KIFAP3	ENST00000361580	human	ensembl	74_37	-1	known	missense	c.2209	p.D737N	0.998	NULL	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	KIFAP3	HGNC	ENSG00000075945				178	0	0	100	49	32.8859
MST1L	0	genome.wustl.edu	37	1	17085016	17085016	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	17085016	17085016	G	A	SNP	MST1L	ENST00000455405	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MST1L	HGNC	ENSG00000186715				208	0	0	206	18	8.03571
FMO2	0	genome.wustl.edu	37	1	171173044	171173044	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	171173044	171173044	G	A	SNP	FMO2	ENST00000209929	human	ensembl	74_37	+1	known	missense	c.668	p.R223H	0.998	pfam_Flavin_mOase-like	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,prints_Flavin_mOase,prints_Flavin_mOase_2,prints_Flavin_mOase_1,prints_Flavin_mOase_5	-	no_errors	FMO2	HGNC	ENSG00000094963				63	0	0	27	17	38.6364
PRRC2C	0	genome.wustl.edu	37	1	171501615	171501615	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	171501615	171501615	G	A	SNP	PRRC2C	ENST00000392078	human	ensembl	74_37	+1	known	missense	c.1388	p.R463H	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523				32	0	0	30	13	30.2326
PRDX6	0	genome.wustl.edu	37	1	173454570	173454570	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	173454570	173454570	G	A	SNP	PRDX6	ENST00000340385	human	ensembl	74_37	+1	known	missense	c.323	p.R108Q	1.000	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Peroxiredoxin_C,pfam_Redoxin,superfamily_Thioredoxin-like_fold	-	no_errors	PRDX6	HGNC	ENSG00000117592				98	0	0	47	24	33.8028
CEP350	0	genome.wustl.edu	37	1	180022186	180022186	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	180022186	180022186	G	A	SNP	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	missense	c.4874	p.R1625Q	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837				44	0	0	23	8	25.8065
KIAA1614	0	genome.wustl.edu	37	1	180904929	180904929	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	180904929	180904929	G	A	SNP	KIAA1614	ENST00000367588	human	ensembl	74_37	+1	known	silent	c.1884	p.A628	0.000	NULL	NULL	-	no_errors	KIAA1614	HGNC	ENSG00000135835				45	0	0	40	20	33.3333
ZNF648	0	genome.wustl.edu	37	1	182026330	182026330	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	182026330	182026330	G	A	SNP	ZNF648	ENST00000339948	human	ensembl	74_37	-1	novel	silent	c.816	p.R272	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF648	HGNC	ENSG00000179930				10	0	0	16	9	36
ZNF648	0	genome.wustl.edu	37	1	182026596	182026596	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	182026596	182026596	C	T	SNP	ZNF648	ENST00000339948	human	ensembl	74_37	-1	novel	missense	c.550	p.A184T	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF648	HGNC	ENSG00000179930				44	0	0	26	21	44.6809
NCF2	0	genome.wustl.edu	37	1	183559420	183559420	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	183559420	183559420	C	A	SNP	NCF2	ENST00000367535	human	ensembl	74_37	-1	known	silent	c.45	p.L15	0.864	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_TPR_1,pfam_OPR_PB1,superfamily_SH3_domain,smart_TPR_repeat,smart_SH3_domain,smart_OPR_PB1,pfscan_SH3_domain,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_p67phox,prints_SH3_domain	-	no_errors	NCF2	HGNC	ENSG00000116701				103	1	0.961538	98	47	32.4138
HMCN1	0	genome.wustl.edu	37	1	185958749	185958749	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	185958749	185958749	G	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.3178	p.A1060T	0.996	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341				49	0	0	32	17	34.6939
HMCN1	0	genome.wustl.edu	37	1	186114581	186114581	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	186114581	186114581	G	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	silent	c.14313	p.R4771	0.944	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341				106	0	0	68	15	18.0723
HMCN1	0	genome.wustl.edu	37	1	186147634	186147634	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	186147634	186147634	G	T	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	nonsense	c.16030	p.G5344*	1.000	pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341				204	1	0.487805	143	75	34.4037
PRG4	0	genome.wustl.edu	37	1	186277217	186277217	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	186277217	186277217	C	A	SNP	PRG4	ENST00000445192	human	ensembl	74_37	+1	known	missense	c.2366	p.P789H	0.000	NULL	pfam_Somatomedin_B_dom,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690				271	0	0	225	151	40.1596
PAX7	0	genome.wustl.edu	37	1	19027168	19027168	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	19027168	19027168	G	A	SNP	PAX7	ENST00000375375	human	ensembl	74_37	+1	known	missense	c.808	p.A270T	0.999	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Paired_dom,pfam_Homeobox_dom,pfam_Pax7,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,prints_Paired_dom,pfscan_Homeobox_dom,pfscan_Paired_dom	-	no_errors	PAX7	HGNC	ENSG00000009709				110	0	0	65	17	20.7317
GABRD	0	genome.wustl.edu	37	1	1957177	1957177	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	1957177	1957177	G	A	SNP	GABRD	ENST00000378585	human	ensembl	74_37	+1	known	missense	c.470	p.R157Q	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAd_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRD	HGNC	ENSG00000187730				49	0	0	34	24	41.3793
KCNT2	0	genome.wustl.edu	37	1	196392226	196392226	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	196392226	196392226	G	C	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.1139	p.A380G	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687				23	0	0	9	4	30.7692
GPR25	0	genome.wustl.edu	37	1	200843191	200843191	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	200843191	200843191	C	T	SNP	GPR25	ENST00000304244	human	ensembl	74_37	+1	known	silent	c.1026	p.D342	0.101	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR25	HGNC	ENSG00000170128				23	0	0	17	5	22.7273
CACNA1S	0	genome.wustl.edu	37	1	201013510	201013510	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	201013510	201013510	C	A	SNP	CACNA1S	ENST00000362061	human	ensembl	74_37	-1	known	missense	c.4743	p.E1581D	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_VDCC_L_a1ssu	-	no_errors	CACNA1S	HGNC	ENSG00000081248				65	0	0	64	34	34.6939
IPO9	0	genome.wustl.edu	37	1	201827617	201827617	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	201827617	201827617	G	A	SNP	IPO9	ENST00000361565	human	ensembl	74_37	+1	known	missense	c.1264	p.A422T	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO9	HGNC	ENSG00000198700				215	0	0	155	81	34.322
CNTN2	0	genome.wustl.edu	37	1	205030396	205030396	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	205030396	205030396	G	A	SNP	CNTN2	ENST00000331830	human	ensembl	74_37	+1	known	missense	c.821	p.R274H	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN2	HGNC	ENSG00000184144				52	0	0	26	15	36.5854
SLC41A1	0	genome.wustl.edu	37	1	205779576	205779576	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	205779576	205779576	C	T	SNP	SLC41A1	ENST00000484000	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.955	-	-	-	no_errors	SLC41A1	HGNC	ENSG00000133065				161	0	0	60	31	34.0659
IKBKE	0	genome.wustl.edu	37	1	206650040	206650040	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	206650040	206650040	G	A	SNP	IKBKE	ENST00000367120	human	ensembl	74_37	+1	known	missense	c.560	p.R187Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	IKBKE	HGNC	ENSG00000143466				52	0	0	42	19	31.1475
CAMK1G	0	genome.wustl.edu	37	1	209785458	209785458	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	209785458	209785458	G	A	SNP	CAMK1G	ENST00000009105	human	ensembl	74_37	+1	known	missense	c.1237	p.A413T	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK1G	HGNC	ENSG00000008118				55	0	0	67	27	28.7234
KIF17	0	genome.wustl.edu	37	1	21044071	21044071	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	21044071	21044071	G	A	SNP	KIF17	ENST00000247986	human	ensembl	74_37	-1	known	silent	c.129	p.G43	0.986	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF17	HGNC	ENSG00000117245				67	0	0	35	28	44.4444
SH2D5	0	genome.wustl.edu	37	1	21050922	21050922	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	21050922	21050922	C	T	SNP	SH2D5	ENST00000444387	human	ensembl	74_37	-1	known	silent	c.597	p.R199	1.000	NULL	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_SH2	-	no_errors	SH2D5	HGNC	ENSG00000189410				55	0	0	32	26	44.8276
PTPN14	0	genome.wustl.edu	37	1	214557451	214557451	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	214557451	214557451	C	T	SNP	PTPN14	ENST00000366956	human	ensembl	74_37	-1	known	missense	c.1747	p.A583T	0.997	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN14	HGNC	ENSG00000152104				90	0	0	41	17	29.3103
HSPG2	0	genome.wustl.edu	37	1	22172952	22172952	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	22172952	22172952	T	C	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.8305	p.S2769G	0.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				147	0	0	94	50	34.7222
C1orf145	0	genome.wustl.edu	37	1	228400402	228400402	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	228400402	228400402	C	T	SNP	C1orf145	ENST00000337335	human	ensembl	74_37	-1	known	missense	c.446	p.R149H	0.988	NULL	NULL	-	no_errors	C1orf145	HGNC	ENSG00000162913				32	0	0	38	19	33.3333
OBSCN	0	genome.wustl.edu	37	1	228412271	228412271	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	228412271	228412271	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.2765	p.T922M	0.408	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				66	0	0	73	40	35.3982
OBSCN	0	genome.wustl.edu	37	1	228482038	228482038	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	228482038	228482038	G	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.11317	p.G3773C	0.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				171	1	0.581395	143	59	29.2079
NUP133	0	genome.wustl.edu	37	1	229599315	229599315	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	229599315	229599315	C	T	SNP	NUP133	ENST00000261396	human	ensembl	74_37	-1	known	missense	c.2660	p.R887H	1.000	pfam_Nucleoporin_Nup133/Nup155_C	pfam_Nucleoporin_Nup133/Nup155_C,pfam_Nucleoporin_Nup133/Nup155_N	-	no_errors	NUP133	HGNC	ENSG00000069248				65	0	0	60	16	21.0526
C1orf131	0	genome.wustl.edu	37	1	231362795	231362795	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	231362795	231362795	C	T	SNP	C1orf131	ENST00000366649	human	ensembl	74_37	-1	known	missense	c.530	p.R177Q	0.996	NULL	NULL	-	no_errors	C1orf131	HGNC	ENSG00000143633				85	0	0	42	21	33.3333
SIPA1L2	0	genome.wustl.edu	37	1	232650941	232650941	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	232650941	232650941	T	C	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	missense	c.145	p.T49A	0.286	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				94	0	0	67	28	29.4737
LYST	0	genome.wustl.edu	37	1	235922666	235922666	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	235922666	235922666	C	T	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	missense	c.6487	p.A2163T	0.004	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669				117	1	0.847458	64	30	31.9149
RYR2	0	genome.wustl.edu	37	1	237617717	237617717	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	237617717	237617717	C	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.1313	p.A438V	0.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				64	0	0	28	22	44
RYR2	0	genome.wustl.edu	37	1	237870524	237870524	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	237870524	237870524	A	G	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.9850	p.N3284D	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				16	0	0	20	7	25.9259
FMN2	0	genome.wustl.edu	37	1	240497412	240497412	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	240497412	240497412	G	A	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.4648	p.A1550T	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				164	0	0	91	50	35.461
CEP170	0	genome.wustl.edu	37	1	243303329	243303329	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	243303329	243303329	G	C	SNP	CEP170	ENST00000366542	human	ensembl	74_37	-1	known	missense	c.4140	p.N1380K	1.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_Fibronectin_type3,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170	HGNC	ENSG00000143702				46	0	0	23	8	25.8065
HNRNPU-AS1	0	genome.wustl.edu	37	1	245017699	245017699	+	RNA	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	245017699	245017699	A	G	SNP	HNRNPU-AS1	ENST00000489705	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HNRNPU-AS1	HGNC	ENSG00000188206				45	0	0	16	15	48.3871
CNST	0	genome.wustl.edu	37	1	246755193	246755193	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	246755193	246755193	G	A	SNP	CNST	ENST00000366513	human	ensembl	74_37	+1	known	missense	c.329	p.G110E	0.975	NULL	NULL	-	no_errors	CNST	HGNC	ENSG00000162852				51	0	0	23	13	36.1111
TRIM58	0	genome.wustl.edu	37	1	248020689	248020689	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	248020689	248020689	G	A	SNP	TRIM58	ENST00000366481	human	ensembl	74_37	+1	known	silent	c.141	p.S47	0.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM58	HGNC	ENSG00000162722				17	0	0	12	4	25
ZNF672	0	genome.wustl.edu	37	1	249142519	249142519	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	249142519	249142519	C	T	SNP	ZNF672	ENST00000306562	human	ensembl	74_37	+1	known	missense	c.1046	p.T349M	0.056	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF672	HGNC	ENSG00000171161				38	0	0	32	10	23.8095
RUNX3	0	genome.wustl.edu	37	1	25254203	25254203	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	25254203	25254203	C	T	SNP	RUNX3	ENST00000338888	human	ensembl	74_37	-1	known	missense	c.343	p.V115M	1.000	pfam_Runt_dom,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_Runt_dom,prints_AML1_Runt	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX3	HGNC	ENSG00000020633				218	0	0	186	61	24.6964
ZNF683	0	genome.wustl.edu	37	1	26694122	26694122	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	26694122	26694122	G	A	SNP	ZNF683	ENST00000403843	human	ensembl	74_37	-1	known	missense	c.281	p.T94I	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF683	HGNC	ENSG00000176083				36	0	0	35	4	10.2564
DHDDS	0	genome.wustl.edu	37	1	26795419	26795419	+	Silent	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	26795419	26795419	A	C	SNP	DHDDS	ENST00000360009	human	ensembl	74_37	+1	known	silent	c.802	p.R268	1.000	NULL	pfam_UPP_synth-like,superfamily_UPP_synth-like,tigrfam_UPP_synth-like	-	no_errors	DHDDS	HGNC	ENSG00000117682				75	0	0	72	23	24.2105
ARID1A	0	genome.wustl.edu	37	1	27088699	27088699	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	27088699	27088699	G	A	SNP	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	missense	c.2308	p.A770T	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				135	0	0	85	59	40.9722
WDTC1	0	genome.wustl.edu	37	1	27620601	27620601	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	27620601	27620601	G	A	SNP	WDTC1	ENST00000319394	human	ensembl	74_37	+1	known	missense	c.751	p.V251I	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_TPR_repeat,pfscan_TPR-contain_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDTC1	HGNC	ENSG00000142784				77	0	0	52	25	32.4675
CD164L2	0	genome.wustl.edu	37	1	27709037	27709037	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	27709037	27709037	C	T	SNP	CD164L2	ENST00000374030	human	ensembl	74_37	-1	known	missense	c.209	p.R70H	0.803	pfam_CD164_MGC24	pfam_CD164_MGC24	-	no_errors	CD164L2	HGNC	ENSG00000174950				57	0	0	47	16	25.3968
AHDC1	0	genome.wustl.edu	37	1	27876815	27876815	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	27876815	27876815	G	A	SNP	AHDC1	ENST00000247087	human	ensembl	74_37	-1	known	silent	c.1812	p.D604	0.916	NULL	NULL	-	no_errors	AHDC1	HGNC	ENSG00000126705				240	0	0	152	71	31.8386
SERINC2	0	genome.wustl.edu	37	1	31898734	31898734	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	31898734	31898734	A	C	SNP	SERINC2	ENST00000373710	human	ensembl	74_37	+1	known	missense	c.611	p.E204A	0.997	pfam_TMS_TDE	pfam_TMS_TDE	-	no_errors	SERINC2	HGNC	ENSG00000168528				34	0	0	42	26	38.2353
HDAC1	0	genome.wustl.edu	37	1	32793251	32793251	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	32793251	32793251	G	T	SNP	HDAC1	ENST00000373548	human	ensembl	74_37	+1	known	missense	c.609	p.E203D	1.000	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1,prints_His_deacetylse_1,prints_His_deacetylse	-	no_errors	HDAC1	HGNC	ENSG00000116478				96	0	0	57	36	38.7097
ADC	0	genome.wustl.edu	37	1	33560306	33560306	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	33560306	33560306	T	G	SNP	ADC	ENST00000373441	human	ensembl	74_37	+1	known	missense	c.745	p.F249V	1.000	pfam_De-COase2_N,superfamily_Ala_racemase/Decarboxylase_C	pfam_De-COase2_N,pfam_De-COase2_C,superfamily_Ala_racemase/Decarboxylase_C,prints_Orn_de-COase,prints_Orn/DAP/Arg_de-COase	-	no_errors	ADC	HGNC	ENSG00000142920				107	0	0	65	33	33.6735
DLGAP3	0	genome.wustl.edu	37	1	35334691	35334691	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	35334691	35334691	C	T	SNP	DLGAP3	ENST00000235180	human	ensembl	74_37	-1	known	splice_site	c.2001-1	e7-1	1.000	-	-	-	no_errors	DLGAP3	HGNC	ENSG00000116544				26	0	0	12	8	40
CEP104	0	genome.wustl.edu	37	1	3768920	3768920	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	3768920	3768920	C	T	SNP	CEP104	ENST00000378230	human	ensembl	74_37	-1	known	missense	c.52	p.G18S	0.990	superfamily_Galactose-bd-like	superfamily_Galactose-bd-like,superfamily_ARM-type_fold	-	no_errors	CEP104	HGNC	ENSG00000116198				84	0	0	46	23	33.3333
MACF1	0	genome.wustl.edu	37	1	39854025	39854025	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	39854025	39854025	G	A	SNP	MACF1	ENST00000317713	human	ensembl	74_37	+1	known	missense	c.9325	p.V3109I	0.000	smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603				50	0	0	20	7	25.9259
CAP1	0	genome.wustl.edu	37	1	40525076	40525076	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	40525076	40525076	G	A	SNP	CAP1	ENST00000372792	human	ensembl	74_37	+1	known	missense	c.58	p.A20T	1.000	pfam_Adenylate_cyclase-assoc_CAP_N	pfam_Adenylate_cyclase-assoc_CAP_N,pfam_Adenylate_cyclase-assoc_CAP_C,superfamily_Adenylate_cyclase-assoc_CAP_N,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif	-	no_errors	CAP1	HGNC	ENSG00000131236				113	0	0	70	26	27.0833
MPL	0	genome.wustl.edu	37	1	43818232	43818232	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	43818232	43818232	G	A	SNP	MPL	ENST00000372470	human	ensembl	74_37	+1	known	missense	c.1697	p.S566N	1.000	NULL	pfam_Growth/epo_recpt_lig-bind,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	MPL	HGNC	ENSG00000117400				58	0	0	53	27	33.75
ATP6V0B	0	genome.wustl.edu	37	1	44442888	44442888	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	44442888	44442888	G	T	SNP	ATP6V0B	ENST00000472174	human	ensembl	74_37	+1	known	missense	c.591	p.Q197H	1.000	superfamily_ATPase_proteolipid_c_like_dom,prints_ATPase_proteolipid_csu	pfam_ATPase_proteolipid_c_like_dom,superfamily_ATPase_proteolipid_c_like_dom,prints_ATPase_proteolipid_csu	-	no_errors	ATP6V0B	HGNC	ENSG00000117410				103	0	0	43	29	40.2778
ENSG00000225721	0	genome.wustl.edu	37	1	45241416	45241416	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	45241416	45241416	C	T	SNP	ENSG00000225721	ENST00000428791	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	RP11-269F19.2	Clone_based_vega_gene	ENSG00000225721				26	0	0	22	10	31.25
PLK3	0	genome.wustl.edu	37	1	45266542	45266542	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	45266542	45266542	G	A	SNP	PLK3	ENST00000372201	human	ensembl	74_37	+1	known	missense	c.241	p.D81N	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_POLO_box_duplicated_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK3	HGNC	ENSG00000173846				32	0	0	23	12	34.2857
PTCH2	0	genome.wustl.edu	37	1	45294915	45294915	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	45294915	45294915	C	T	SNP	PTCH2	ENST00000372192	human	ensembl	74_37	-1	known	missense	c.1285	p.G429R	1.000	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH2	HGNC	ENSG00000117425				42	0	0	51	24	32
SCP2	0	genome.wustl.edu	37	1	53446175	53446175	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	53446175	53446175	C	T	SNP	SCP2	ENST00000371514	human	ensembl	74_37	+1	known	silent	c.933	p.N311	0.996	pfam_Thiolase_C,superfamily_Thiolase-like	pfam_SCP2_sterol-bd_dom,pfam_Thiolase_C,pfam_Thiolase_N,superfamily_Thiolase-like,superfamily_SCP2_sterol-bd_dom	-	no_errors	SCP2	HGNC	ENSG00000116171				122	0	0	59	37	38.5417
NFIA	0	genome.wustl.edu	37	1	61921003	61921003	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	61921003	61921003	G	A	SNP	NFIA	ENST00000371187	human	ensembl	74_37	+1	known	silent	c.1449	p.A483	0.988	NULL	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIA	HGNC	ENSG00000162599				91	0	0	56	31	35.6322
DOCK7	0	genome.wustl.edu	37	1	62960061	62960061	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	62960061	62960061	C	T	SNP	DOCK7	ENST00000251157	human	ensembl	74_37	-1	known	missense	c.5075	p.R1692Q	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK7	HGNC	ENSG00000116641				66	0	0	50	13	20.6349
ATG4C	0	genome.wustl.edu	37	1	63299733	63299733	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	63299733	63299733	G	A	SNP	ATG4C	ENST00000317868	human	ensembl	74_37	+1	known	missense	c.958	p.V320M	1.000	pfam_Peptidase_C54	pfam_Peptidase_C54	-	no_errors	ATG4C	HGNC	ENSG00000125703				116	0	0	40	15	27.2727
ROR1	0	genome.wustl.edu	37	1	64644147	64644147	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	64644147	64644147	C	T	SNP	ROR1	ENST00000371079	human	ensembl	74_37	+1	known	missense	c.2423	p.P808L	1.000	pirsf_Tyr_kinase_rcpt_ROR	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR1	HGNC	ENSG00000185483				122	0	0	113	7	5.83333
PLEKHG5	0	genome.wustl.edu	37	1	6556577	6556577	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	6556577	6556577	G	A	SNP	PLEKHG5	ENST00000537245	human	ensembl	74_37	-1	known	silent	c.126	p.C42	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG5	HGNC	ENSG00000171680				55	0	0	32	18	36
DNAJC6	0	genome.wustl.edu	37	1	65874405	65874405	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	65874405	65874405	G	A	SNP	DNAJC6	ENST00000371069	human	ensembl	74_37	+1	known	missense	c.2573	p.R858Q	1.000	superfamily_DnaJ_domain	pfam_Tensin_phosphatase_C2-dom,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_C2_dom,smart_DnaJ_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom,pfscan_DnaJ_domain	-	no_errors	DNAJC6	HGNC	ENSG00000116675				72	0	0	30	21	41.1765
CAMTA1	0	genome.wustl.edu	37	1	7724181	7724181	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	7724181	7724181	C	T	SNP	CAMTA1	ENST00000303635	human	ensembl	74_37	+1	known	missense	c.1574	p.T525I	1.000	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA1	HGNC	ENSG00000171735				113	0	0	89	6	6.31579
CLCA1	0	genome.wustl.edu	37	1	86961302	86961302	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	86961302	86961302	G	A	SNP	CLCA1	ENST00000234701	human	ensembl	74_37	+1	known	missense	c.2057	p.R686Q	0.001	tigrfam_CaCC_prot	pfam_Cl_channel_Ca,pfam_DUF1973,pfam_VWF_A,superfamily_Fibronectin_type3,smart_VWF_A,pfscan_VWF_A,tigrfam_CaCC_prot	-	no_errors	CLCA1	HGNC	ENSG00000016490				61	0	0	30	15	33.3333
ZNF644	0	genome.wustl.edu	37	1	91405088	91405088	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	91405088	91405088	A	G	SNP	ZNF644	ENST00000337393	human	ensembl	74_37	-1	known	missense	c.1823	p.L608S	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF644	HGNC	ENSG00000122482				152	0	0	63	39	38.2353
TGFBR3	0	genome.wustl.edu	37	1	92181821	92181821	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	92181821	92181821	A	G	SNP	TGFBR3	ENST00000212355	human	ensembl	74_37	-1	known	missense	c.1838	p.V613A	1.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	TGFBR3	HGNC	ENSG00000069702				52	0	0	36	18	33.3333
PYROXD2	0	genome.wustl.edu	37	10	100159860	100159860	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	100159860	100159860	T	C	SNP	PYROXD2	ENST00000370575	human	ensembl	74_37	-1	known	missense	c.470	p.Q157R	1.000	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Amino_oxidase	-	no_errors	PYROXD2	HGNC	ENSG00000119943				48	0	0	32	25	43.8596
NKX2-3	0	genome.wustl.edu	37	10	101295042	101295042	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	101295042	101295042	C	T	SNP	NKX2-3	ENST00000344586	human	ensembl	74_37	+1	known	missense	c.659	p.P220L	1.000	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-3	HGNC	ENSG00000119919				18	0	0	11	8	42.1053
DNMBP	0	genome.wustl.edu	37	10	101637006	101637006	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	101637006	101637006	T	C	SNP	DNMBP	ENST00000342239	human	ensembl	74_37	-1	known	missense	c.4708	p.K1570E	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_BAR_dom,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain,prints_p67phox,prints_Spectrin_alpha_SH3	-	no_errors	DNMBP	HGNC	ENSG00000107554				163	0	0	118	7	5.6
SEC31B	0	genome.wustl.edu	37	10	102248625	102248625	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	102248625	102248625	G	A	SNP	SEC31B	ENST00000370345	human	ensembl	74_37	-1	known	missense	c.3278	p.A1093V	0.951	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31B	HGNC	ENSG00000075826				105	0	0	53	36	40.4494
MGEA5	0	genome.wustl.edu	37	10	103558759	103558759	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	103558759	103558759	G	A	SNP	MGEA5	ENST00000361464	human	ensembl	74_37	-1	known	missense	c.1649	p.A550V	0.992	NULL	pfam_Beta-N-acetylglucosaminidase,superfamily_Glycoside_hydrolase_SF,superfamily_Acyl_CoA_acyltransferase	-	no_errors	MGEA5	HGNC	ENSG00000198408				124	0	0	76	35	31.5315
NEURL	0	genome.wustl.edu	37	10	105349958	105349958	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	105349958	105349958	C	T	SNP	NEURL	ENST00000369780	human	ensembl	74_37	+1	known	silent	c.1554	p.S518	0.385	NULL	pfam_Neu_Z,smart_Neu_Z,pfscan_Neu_Z,pfscan_Znf_RING	-	no_errors	NEURL	HGNC	ENSG00000107954				145	0	0	102	53	34.1935
SH3PXD2A	0	genome.wustl.edu	37	10	105362048	105362048	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	105362048	105362048	G	A	SNP	SH3PXD2A	ENST00000369774	human	ensembl	74_37	-1	known	missense	c.2927	p.A976V	0.976	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2A	HGNC	ENSG00000107957				55	0	0	45	18	28.5714
SORCS1	0	genome.wustl.edu	37	10	108412225	108412225	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	108412225	108412225	G	A	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	missense	c.2390	p.P797L	1.000	superfamily_PKD_dom,smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018				95	0	0	67	44	39.6396
PDCD4	0	genome.wustl.edu	37	10	112641196	112641196	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	112641196	112641196	C	T	SNP	PDCD4	ENST00000280154	human	ensembl	74_37	+1	known	silent	c.249	p.D83	0.980	NULL	pfam_Initiation_fac_eIF4g_MI,superfamily_ARM-type_fold,smart_Initiation_fac_eIF4g_MI	-	no_errors	PDCD4	HGNC	ENSG00000150593				116	0	0	58	39	40.2062
ABLIM1	0	genome.wustl.edu	37	10	116417742	116417742	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	116417742	116417742	C	T	SNP	ABLIM1	ENST00000277895	human	ensembl	74_37	-1	known	missense	c.218	p.R73H	0.000	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM1	HGNC	ENSG00000099204				100	0	0	51	20	28.169
SLC18A2	0	genome.wustl.edu	37	10	119001232	119001232	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	119001232	119001232	C	T	SNP	SLC18A2	ENST00000298472	human	ensembl	74_37	+1	known	missense	c.28	p.R10C	0.306	NULL	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A2	HGNC	ENSG00000165646				18	0	0	15	5	25
GRK5	0	genome.wustl.edu	37	10	121212266	121212266	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	121212266	121212266	C	T	SNP	GRK5	ENST00000392870	human	ensembl	74_37	+1	known	silent	c.1488	p.D496	0.107	superfamily_Kinase-like_dom,smart_AGC-kinase_C,prints_GPCR_kinase	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK5	HGNC	ENSG00000198873				50	0	0	31	16	34.0426
MCMBP	0	genome.wustl.edu	37	10	121591584	121591584	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	121591584	121591584	C	T	SNP	MCMBP	ENST00000360003	human	ensembl	74_37	-1	known	missense	c.1742	p.R581Q	1.000	pfam_MCM_complex-bd	pfam_MCM_complex-bd	-	no_errors	MCMBP	HGNC	ENSG00000197771				94	0	0	92	5	5.15464
CDC123	0	genome.wustl.edu	37	10	12279206	12279206	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	12279206	12279206	G	A	SNP	CDC123	ENST00000281141	human	ensembl	74_37	+1	known	missense	c.629	p.R210H	1.000	pfam_D123,pirsf_Cell_div_Cdc123	pfam_D123,pirsf_Cell_div_Cdc123	-	no_errors	CDC123	HGNC	ENSG00000151465				74	0	0	30	13	30.2326
BUB3	0	genome.wustl.edu	37	10	124914569	124914569	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	124914569	124914569	G	A	SNP	BUB3	ENST00000368865	human	ensembl	74_37	+1	known	missense	c.136	p.A46T	0.999	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	BUB3	HGNC	ENSG00000154473				132	0	0	81	53	39.5522
MMP21	0	genome.wustl.edu	37	10	127462424	127462424	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	127462424	127462424	C	T	SNP	MMP21	ENST00000368808	human	ensembl	74_37	-1	known	missense	c.673	p.D225N	1.000	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP21	HGNC	ENSG00000154485				80	0	0	47	37	44.0476
UROS	0	genome.wustl.edu	37	10	127477547	127477547	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	127477547	127477547	G	A	SNP	UROS	ENST00000368786	human	ensembl	74_37	-1	known	missense	c.688	p.R230C	0.005	pfam_4pyrrol_synth_uPrphyn_synth,superfamily_4pyrrol_synth_uPrphyn_synth	pfam_4pyrrol_synth_uPrphyn_synth,superfamily_4pyrrol_synth_uPrphyn_synth	-	no_errors	UROS	HGNC	ENSG00000188690				31	0	0	31	9	22.5
BCCIP	0	genome.wustl.edu	37	10	127524804	127524804	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	127524804	127524804	C	T	SNP	BCCIP	ENST00000278100	human	ensembl	74_37	+1	known	silent	c.906	p.N302	0.000	NULL	NULL	-	no_errors	BCCIP	HGNC	ENSG00000107949				101	0	0	48	22	31.4286
MKI67	0	genome.wustl.edu	37	10	129905283	129905283	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	129905283	129905283	G	A	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	silent	c.4821	p.N1607	0.000	NULL	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773				226	0	0	151	62	29.108
TCERG1L	0	genome.wustl.edu	37	10	132891537	132891537	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	132891537	132891537	C	A	SNP	TCERG1L	ENST00000368642	human	ensembl	74_37	-1	known	missense	c.1649	p.R550M	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1L	HGNC	ENSG00000176769				116	0	0	54	17	23.9437
TCERG1L	0	genome.wustl.edu	37	10	132944790	132944790	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	132944790	132944790	G	A	SNP	TCERG1L	ENST00000368642	human	ensembl	74_37	-1	known	missense	c.1168	p.R390C	1.000	NULL	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1L	HGNC	ENSG00000176769				82	0	0	47	23	32.8571
PPP2R2D	0	genome.wustl.edu	37	10	133769241	133769241	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	133769241	133769241	C	T	SNP	PPP2R2D	ENST00000455566	human	ensembl	74_37	+1	known	missense	c.1043	p.T348M	0.520	superfamily_WD40_repeat_dom,pirsf_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2D	HGNC	ENSG00000175470				48	0	0	38	18	32.1429
PWWP2B	0	genome.wustl.edu	37	10	134218962	134218962	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	134218962	134218962	C	T	SNP	PWWP2B	ENST00000305233	human	ensembl	74_37	+1	known	missense	c.958	p.R320W	0.716	NULL	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	PWWP2B	HGNC	ENSG00000171813				31	0	0	25	22	46.8085
KNDC1	0	genome.wustl.edu	37	10	135025243	135025243	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	135025243	135025243	C	T	SNP	KNDC1	ENST00000368572	human	ensembl	74_37	+1	known	missense	c.4123	p.R1375W	0.986	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_Kinase-like_dom,smart_KIND,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	KNDC1	HGNC	ENSG00000171798				59	0	0	33	20	37.7358
STAM	0	genome.wustl.edu	37	10	17742265	17742265	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	17742265	17742265	C	T	SNP	STAM	ENST00000377524	human	ensembl	74_37	+1	known	missense	c.899	p.A300V	1.000	NULL	pfam_VHS,pfam_SH3_domain,pfam_SH3_2,pfam_Ubiquitin-int_motif,superfamily_ENTH_VHS,superfamily_SH3_domain,smart_VHS_subgr,smart_SH3_domain,pfscan_SH3_domain,pfscan_Ubiquitin-int_motif,pfscan_VHS,prints_SH3_domain,prints_p67phox	-	no_errors	STAM	HGNC	ENSG00000136738				85	0	0	24	25	51.0204
SLC39A12	0	genome.wustl.edu	37	10	18250727	18250727	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	18250727	18250727	C	A	SNP	SLC39A12	ENST00000377369	human	ensembl	74_37	+1	known	nonsense	c.479	p.S160*	0.941	NULL	pfam_ZIP	-	no_errors	SLC39A12	HGNC	ENSG00000148482				98	0	0	34	14	29.1667
CACNB2	0	genome.wustl.edu	37	10	18690913	18690913	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	18690913	18690913	C	T	SNP	CACNB2	ENST00000324631	human	ensembl	74_37	+1	known	missense	c.274	p.R92W	1.000	pfam_VDCC_L_bsu	pfam_GK/Ca_channel_bsu,pfam_VDCC_L_bsu,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_SH3_domain,prints_VDCC_L_bsu,prints_VDCC_L_b2su	-	no_errors	CACNB2	HGNC	ENSG00000165995				62	0	0	33	19	36.5385
ZMYND11	0	genome.wustl.edu	37	10	298396	298396	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	298396	298396	C	T	SNP	ZMYND11	ENST00000381591	human	ensembl	74_37	+1	known	missense	c.1795	p.R599C	1.000	NULL	pfam_PWWP_dom,pfam_Bromodomain,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND11	HGNC	ENSG00000015171				111	0	0	114	58	33.7209
KIAA1462	0	genome.wustl.edu	37	10	30316721	30316721	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	30316721	30316721	C	T	SNP	KIAA1462	ENST00000375377	human	ensembl	74_37	-1	known	missense	c.2356	p.V786M	0.000	NULL	NULL	-	no_errors	KIAA1462	HGNC	ENSG00000165757				127	0	0	98	46	31.9444
PFKP	0	genome.wustl.edu	37	10	3151664	3151664	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	3151664	3151664	G	A	SNP	PFKP	ENST00000381125	human	ensembl	74_37	+1	known	missense	c.1081	p.V361M	1.000	superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,tigrfam_6-phosphofructokinase_euk	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	-	no_errors	PFKP	HGNC	ENSG00000067057				24	0	0	17	9	34.6154
PARD3	0	genome.wustl.edu	37	10	34400252	34400252	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	34400252	34400252	C	T	SNP	PARD3	ENST00000374789	human	ensembl	74_37	-1	known	missense	c.3916	p.G1306R	0.993	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3	HGNC	ENSG00000148498				73	0	0	67	4	5.6338
CREM	0	genome.wustl.edu	37	10	35495867	35495867	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	35495867	35495867	G	A	SNP	CREM	ENST00000395895	human	ensembl	74_37	+1	known	missense	c.826	p.A276T	0.989	NULL	pfam_bZIP,pfam_Coactivator_CBP_pKID,smart_bZIP,pfscan_Coactivator_CBP_pKID,pfscan_bZIP,prints_Leuzip_CREB	-	no_errors	CREM	HGNC	ENSG00000095794				209	0	0	141	101	41.7355
ZNF37A	0	genome.wustl.edu	37	10	38407134	38407134	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	38407134	38407134	A	T	SNP	ZNF37A	ENST00000351773	human	ensembl	74_37	+1	known	missense	c.1055	p.E352V	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF37A	HGNC	ENSG00000075407				121	1	0.819672	113	44	28.0255
ALOX5	0	genome.wustl.edu	37	10	45938635	45938635	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	45938635	45938635	C	T	SNP	ALOX5	ENST00000374391	human	ensembl	74_37	+1	known	silent	c.1422	p.D474	0.966	pfam_LipOase_C,superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C,pfscan_PLAT/LH2_dom	-	no_errors	ALOX5	HGNC	ENSG00000012779				283	1	0.352113	219	88	28.6645
SYT15	0	genome.wustl.edu	37	10	46962096	46962096	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	46962096	46962096	G	A	SNP	SYT15	ENST00000374323	human	ensembl	74_37	-1	known	silent	c.1299	p.G433	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYT15	HGNC	ENSG00000204176				64	0	0	72	17	19.1011
GPRIN2	0	genome.wustl.edu	37	10	47000062	47000062	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	47000062	47000062	C	T	SNP	GPRIN2	ENST00000374314	human	ensembl	74_37	+1	known	silent	c.1182	p.Y394	0.782	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175				104	0	0	127	21	14.1892
ARHGAP22	0	genome.wustl.edu	37	10	49658466	49658466	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	49658466	49658466	C	T	SNP	ARHGAP22	ENST00000417912	human	ensembl	74_37	-1	known	missense	c.1754	p.S585N	0.002	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP22	HGNC	ENSG00000128805				9	0	0	8	3	27.2727
AKR1CL1	0	genome.wustl.edu	37	10	5203674	5203674	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	5203674	5203674	C	T	SNP	AKR1CL1	ENST00000472691	human	ensembl	74_37	-1	known	splice_site	c.NULL	NULL	0.003	-	-	-	no_errors	AKR1CL1	HGNC	ENSG00000196326				85	0	0	51	23	31.0811
AIFM2	0	genome.wustl.edu	37	10	71883164	71883164	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	71883164	71883164	G	A	SNP	AIFM2	ENST00000307864	human	ensembl	74_37	-1	known	silent	c.291	p.G97	0.022	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_OxRdtase_NAD-bd_dom,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Pyridine_nuc-diS_OxRdtase_2,prints_Rng_hydrolase-like	-	no_errors	AIFM2	HGNC	ENSG00000042286				73	0	0	41	31	43.0556
ADAMTS14	0	genome.wustl.edu	37	10	72498695	72498695	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	72498695	72498695	G	A	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	missense	c.1706	p.R569Q	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316				48	0	0	40	15	27.2727
SFMBT2	0	genome.wustl.edu	37	10	7409683	7409683	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	7409683	7409683	C	T	SNP	SFMBT2	ENST00000361972	human	ensembl	74_37	-1	known	missense	c.364	p.D122N	1.000	pfam_Mbt,smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,pfam_Pointed_dom,superfamily_SAM/pointed,superfamily_ARM-type_fold,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SFMBT2	HGNC	ENSG00000198879				55	0	0	32	21	39.6226
OIT3	0	genome.wustl.edu	37	10	74692258	74692258	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	74692258	74692258	G	A	SNP	OIT3	ENST00000334011	human	ensembl	74_37	+1	known	silent	c.1614	p.P538	0.212	NULL	pfam_ZP_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	OIT3	HGNC	ENSG00000138315				79	0	0	56	29	34.1176
AGAP5	0	genome.wustl.edu	37	10	75451802	75451802	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	75451802	75451802	T	C	SNP	AGAP5	ENST00000374094	human	ensembl	74_37	-1	known	missense	c.395	p.H132R	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	AGAP5	HGNC	ENSG00000172650				22	0	0	47	4	7.84314
ZSWIM8	0	genome.wustl.edu	37	10	75558820	75558820	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	75558820	75558820	G	A	SNP	ZSWIM8	ENST00000398706	human	ensembl	74_37	+1	known	missense	c.4237	p.V1413M	1.000	NULL	pfscan_Znf_SWIM	-	no_errors	ZSWIM8	HGNC	ENSG00000214655				35	0	0	21	14	40
ITIH5	0	genome.wustl.edu	37	10	7618941	7618941	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	7618941	7618941	C	T	SNP	ITIH5	ENST00000256861	human	ensembl	74_37	-1	known	missense	c.1453	p.D485N	1.000	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH5	HGNC	ENSG00000123243				96	0	0	44	23	34.3284
GATA3	0	genome.wustl.edu	37	10	8097849	8097849	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	8097849	8097849	G	A	SNP	GATA3	ENST00000379328	human	ensembl	74_37	+1	known	silent	c.231	p.P77	1.000	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485				10	0	0	4	5	55.5556
ZMIZ1	0	genome.wustl.edu	37	10	81050777	81050777	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	81050777	81050777	C	T	SNP	ZMIZ1	ENST00000334512	human	ensembl	74_37	+1	known	missense	c.602	p.A201V	0.992	NULL	pfam_Znf_MIZ,pfscan_Znf_MIZ	-	no_errors	ZMIZ1	HGNC	ENSG00000108175				131	0	0	91	31	25.4098
MYOF	0	genome.wustl.edu	37	10	95155899	95155899	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	95155899	95155899	C	T	SNP	MYOF	ENST00000359263	human	ensembl	74_37	-1	known	missense	c.1417	p.D473N	1.000	smart_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	MYOF	HGNC	ENSG00000138119				93	0	0	41	29	41.4286
FFAR4	0	genome.wustl.edu	37	10	95327000	95327000	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	95327000	95327000	G	A	SNP	FFAR4	ENST00000371483	human	ensembl	74_37	+1	known	missense	c.523	p.V175I	0.954	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	FFAR4	HGNC	ENSG00000186188				27	0	0	31	12	27.907
CCNJ	0	genome.wustl.edu	37	10	97816675	97816675	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	97816675	97816675	C	T	SNP	CCNJ	ENST00000465148	human	ensembl	74_37	+1	known	silent	c.498	p.D166	0.989	pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	pfam_Cyclin_C-dom,pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNJ	HGNC	ENSG00000107443				104	0	0	78	29	27.1028
ZFYVE27	0	genome.wustl.edu	37	10	99509312	99509312	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	99509312	99509312	G	A	SNP	ZFYVE27	ENST00000356257	human	ensembl	74_37	+1	known	silent	c.633	p.T211	0.950	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE27	HGNC	ENSG00000155256				106	0	0	66	37	35.9223
ZFYVE27	0	genome.wustl.edu	37	10	99512810	99512810	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	99512810	99512810	G	A	SNP	ZFYVE27	ENST00000356257	human	ensembl	74_37	+1	known	missense	c.928	p.A310T	0.447	superfamily_Znf_FYVE_PHD	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE27	HGNC	ENSG00000155256				22	0	0	23	3	11.5385
MUC6	0	genome.wustl.edu	37	11	1026075	1026075	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	1026075	1026075	G	A	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	silent	c.2613	p.Y871	0.986	pfam_VWF_type-D,smart_VWC_out,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				12	0	0	9	4	30.7692
MUC2	0	genome.wustl.edu	37	11	1098738	1098738	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	1098738	1098738	G	A	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.7108	p.A2370T	0.096	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788				18	0	0	8	8	50
LAYN	0	genome.wustl.edu	37	11	111425932	111425932	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	111425932	111425932	G	A	SNP	LAYN	ENST00000375615	human	ensembl	74_37	+1	known	missense	c.599	p.G200D	0.993	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	LAYN	HGNC	ENSG00000204381				59	0	0	40	28	41.1765
DIXDC1	0	genome.wustl.edu	37	11	111851488	111851488	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	111851488	111851488	G	A	SNP	DIXDC1	ENST00000440460	human	ensembl	74_37	+1	known	missense	c.683	p.S228N	1.000	NULL	pfam_DIX,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_DIX,pfscan_CH-domain,pfscan_DIX	-	no_errors	DIXDC1	HGNC	ENSG00000150764				53	0	0	32	18	36
NXPE4	0	genome.wustl.edu	37	11	114441770	114441770	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	114441770	114441770	T	C	SNP	NXPE4	ENST00000375478	human	ensembl	74_37	-1	known	missense	c.1525	p.S509G	0.215	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE4	HGNC	ENSG00000137634				118	0	0	51	30	37.037
SIDT2	0	genome.wustl.edu	37	11	117049937	117049937	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	117049937	117049937	C	T	SNP	SIDT2	ENST00000525339	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.976	-	-	-	no_errors	SIDT2	HGNC	ENSG00000149577				43	0	0	28	10	26.3158
VPS11	0	genome.wustl.edu	37	11	118949952	118949952	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	118949952	118949952	C	T	SNP	VPS11	ENST00000300793	human	ensembl	74_37	+1	known	missense	c.2377	p.R793W	0.974	pirsf_VPS11	pfam_VPS11_C,pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_RING,pirsf_VPS11,pfscan_Znf_RING	-	no_errors	VPS11	HGNC	ENSG00000160695				23	0	0	28	3	9.67742
ABCG4	0	genome.wustl.edu	37	11	119029555	119029555	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	119029555	119029555	G	A	SNP	ABCG4	ENST00000307417	human	ensembl	74_37	+1	known	silent	c.1353	p.A451	0.044	pfam_ABC_2_trans	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCG4	HGNC	ENSG00000172350				247	0	0	159	83	34.2975
USP2	0	genome.wustl.edu	37	11	119243468	119243468	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	119243468	119243468	C	A	SNP	USP2	ENST00000260187	human	ensembl	74_37	-1	known	missense	c.723	p.K241N	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP2	HGNC	ENSG00000036672				86	0	0	52	22	29.7297
CRTAM	0	genome.wustl.edu	37	11	122720827	122720827	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	122720827	122720827	C	T	SNP	CRTAM	ENST00000227348	human	ensembl	74_37	+1	known	missense	c.98	p.T33M	0.261	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CRTAM	HGNC	ENSG00000109943				63	0	0	47	21	30.8824
VWA5A	0	genome.wustl.edu	37	11	124007910	124007910	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	124007910	124007910	A	T	SNP	VWA5A	ENST00000392748	human	ensembl	74_37	+1	known	missense	c.1814	p.H605L	0.000	NULL	pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5A	HGNC	ENSG00000110002				97	0	0	40	22	35.4839
MUC5B	0	genome.wustl.edu	37	11	1266656	1266656	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	1266656	1266656	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.8555	p.R2852H	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				149	0	0	141	71	33.4906
KCNJ5	0	genome.wustl.edu	37	11	128781366	128781366	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	128781366	128781366	C	T	SNP	KCNJ5	ENST00000529694	human	ensembl	74_37	+1	known	silent	c.198	p.N66	0.998	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.4	-	no_errors	KCNJ5	HGNC	ENSG00000120457				134	0	0	79	43	35.2459
IGSF9B	0	genome.wustl.edu	37	11	133789980	133789980	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	133789980	133789980	C	T	SNP	IGSF9B	ENST00000321016	human	ensembl	74_37	-1	known	missense	c.3640	p.G1214S	0.966	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9B	HGNC	ENSG00000080854				77	0	0	56	29	34.1176
NCAPD3	0	genome.wustl.edu	37	11	134073687	134073687	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	134073687	134073687	G	T	SNP	NCAPD3	ENST00000534548	human	ensembl	74_37	-1	known	missense	c.1330	p.L444M	1.000	superfamily_ARM-type_fold,pirsf_NCAPD3	superfamily_ARM-type_fold,pirsf_NCAPD3	-	no_errors	NCAPD3	HGNC	ENSG00000151503				92	0	0	73	24	24.7423
PIK3C2A	0	genome.wustl.edu	37	11	17143869	17143869	+	Silent	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	17143869	17143869	A	C	SNP	PIK3C2A	ENST00000265970	human	ensembl	74_37	-1	known	silent	c.2523	p.P841	1.000	pfam_PI3K_C2_dom,superfamily_C2_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,pfscan_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2A	HGNC	ENSG00000011405				123	0	0	48	20	29.4118
USH1C	0	genome.wustl.edu	37	11	17522630	17522630	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	17522630	17522630	G	A	SNP	USH1C	ENST00000005226	human	ensembl	74_37	-1	known	missense	c.2348	p.A783V	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	USH1C	HGNC	ENSG00000006611				45	0	0	33	10	23.2558
MYOD1	0	genome.wustl.edu	37	11	17741783	17741783	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	17741783	17741783	A	G	SNP	MYOD1	ENST00000250003	human	ensembl	74_37	+1	known	missense	c.454	p.N152D	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_Basic,pfam_Myf5,pfam_bHLH_dom,superfamily_bHLH_dom,smart_Basic,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MYOD1	HGNC	ENSG00000129152				60	0	0	37	20	35.0877
PTPN5	0	genome.wustl.edu	37	11	18765600	18765600	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	18765600	18765600	G	T	SNP	PTPN5	ENST00000358540	human	ensembl	74_37	-1	known	missense	c.244	p.L82I	0.963	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN5	HGNC	ENSG00000110786				221	0	0	125	58	31.694
NAV2	0	genome.wustl.edu	37	11	19901479	19901479	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	19901479	19901479	G	A	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	silent	c.576	p.Q192	0.995	superfamily_CH-domain,pfscan_CH-domain	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833				114	0	0	76	52	40.625
LUZP2	0	genome.wustl.edu	37	11	25004729	25004729	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	25004729	25004729	C	T	SNP	LUZP2	ENST00000336930	human	ensembl	74_37	+1	known	missense	c.655	p.R219C	0.719	NULL	NULL	-	no_errors	LUZP2	HGNC	ENSG00000187398				157	0	0	78	33	29.7297
KCNA4	0	genome.wustl.edu	37	11	30033224	30033224	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	30033224	30033224	G	A	SNP	KCNA4	ENST00000328224	human	ensembl	74_37	-1	known	silent	c.1002	p.D334	0.998	NULL	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255				125	0	0	99	40	28.777
ART1	0	genome.wustl.edu	37	11	3681156	3681156	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	3681156	3681156	G	A	SNP	ART1	ENST00000250693	human	ensembl	74_37	+1	known	missense	c.407	p.R136H	0.997	pfam_ART	pfam_ART,prints_ART	-	no_errors	ART1	HGNC	ENSG00000129744				87	0	0	50	35	41.1765
ART1	0	genome.wustl.edu	37	11	3681163	3681163	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	3681163	3681163	G	A	SNP	ART1	ENST00000250693	human	ensembl	74_37	+1	known	silent	c.414	p.A138	0.003	pfam_ART	pfam_ART,prints_ART	-	no_errors	ART1	HGNC	ENSG00000129744				94	0	0	49	31	38.75
TP53I11	0	genome.wustl.edu	37	11	44957180	44957180	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	44957180	44957180	G	A	SNP	TP53I11	ENST00000308212	human	ensembl	74_37	-1	known	missense	c.368	p.T123M	1.000	NULL	NULL	-	no_errors	TP53I11	HGNC	ENSG00000175274				56	0	0	40	23	36.5079
SLC35C1	0	genome.wustl.edu	37	11	45827874	45827874	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	45827874	45827874	C	T	SNP	SLC35C1	ENST00000314134	human	ensembl	74_37	+1	known	silent	c.522	p.C174	0.951	pfam_UAA,pfam_DMT	pfam_Tpt_PEP_trans_dom,pfam_UAA,pfam_DMT	-	no_errors	SLC35C1	HGNC	ENSG00000181830				40	0	0	30	13	30.2326
KBTBD4	0	genome.wustl.edu	37	11	47599371	47599371	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	47599371	47599371	G	T	SNP	KBTBD4	ENST00000430070	human	ensembl	74_37	-1	known	missense	c.229	p.L77M	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	KBTBD4	HGNC	ENSG00000123444				66	0	0	29	21	42
NDUFS3	0	genome.wustl.edu	37	11	47603972	47603972	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	47603972	47603972	C	T	SNP	NDUFS3	ENST00000263774	human	ensembl	74_37	+1	known	silent	c.579	p.F193	0.998	pfam_NADH_UbQ_OxRdtase_30kDa_su,tigrfam_NADH_DH_suC	pfam_NADH_UbQ_OxRdtase_30kDa_su,tigrfam_NADH_DH_suC	-	no_errors	NDUFS3	HGNC	ENSG00000213619				477	0	0	395	53	11.8304
OR51F2	0	genome.wustl.edu	37	11	4843637	4843637	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	4843637	4843637	A	G	SNP	OR51F2	ENST00000322110	human	ensembl	74_37	+1	known	missense	c.1022	p.Y341C	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51F2	HGNC	ENSG00000176925				30	0	0	18	9	33.3333
OR51I1	0	genome.wustl.edu	37	11	5462477	5462477	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	5462477	5462477	T	C	SNP	OR51I1	ENST00000380211	human	ensembl	74_37	-1	known	missense	c.268	p.N90D	0.940	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51I1	HGNC	ENSG00000167359				86	0	0	61	29	32.2222
TRIM48	0	genome.wustl.edu	37	11	55035844	55035844	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	55035844	55035844	T	C	SNP	TRIM48	ENST00000417545	human	ensembl	74_37	+1	known	missense	c.574	p.Y192H	0.183	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM48	HGNC	ENSG00000150244				107	0	0	55	19	25.6757
OR5D18	0	genome.wustl.edu	37	11	55587822	55587822	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	55587822	55587822	C	T	SNP	OR5D18	ENST00000333976	human	ensembl	74_37	+1	known	silent	c.717	p.F239	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D18	HGNC	ENSG00000186119				94	0	0	56	41	42.268
OR5M9	0	genome.wustl.edu	37	11	56229955	56229955	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	56229955	56229955	A	G	SNP	OR5M9	ENST00000279791	human	ensembl	74_37	-1	known	missense	c.923	p.V308A	0.005	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M9	HGNC	ENSG00000150269				93	0	0	50	21	29.5775
OR5M10	0	genome.wustl.edu	37	11	56345173	56345173	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	56345173	56345173	C	T	SNP	OR5M10	ENST00000526812	human	ensembl	74_37	-1	known	missense	c.25	p.V9M	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M10	HGNC	ENSG00000254834				86	0	0	81	5	5.81395
APLNR	0	genome.wustl.edu	37	11	57003530	57003530	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	57003530	57003530	G	A	SNP	APLNR	ENST00000257254	human	ensembl	74_37	-1	known	missense	c.949	p.R317C	1.000	pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_TAS2_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM,prints_APJ_rcpt,prints_GPCR_Rhodpsn,prints_ATII_rcpt	-	no_errors	APLNR	HGNC	ENSG00000134817				50	0	0	60	6	9.09091
PATL1	0	genome.wustl.edu	37	11	59421493	59421493	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	59421493	59421493	G	A	SNP	PATL1	ENST00000300146	human	ensembl	74_37	-1	known	missense	c.1084	p.R362C	1.000	pfam_Topo_II-assoc_PAT1	pfam_Topo_II-assoc_PAT1	-	no_errors	PATL1	HGNC	ENSG00000166889				143	0	0	84	28	25
INCENP	0	genome.wustl.edu	37	11	61895678	61895678	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	61895678	61895678	T	C	SNP	INCENP	ENST00000394818	human	ensembl	74_37	+1	known	silent	c.45	p.C15	0.976	pfam_INCENP_N	pfam_INCENP_N,pfam_Inner_centromere_prot_ARK-bd	-	no_errors	INCENP	HGNC	ENSG00000149503				84	0	0	54	30	35.7143
CDHR5	0	genome.wustl.edu	37	11	619088	619088	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	619088	619088	G	C	SNP	CDHR5	ENST00000358353	human	ensembl	74_37	-1	known	missense	c.1471	p.P491A	0.003	NULL	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	-	no_errors	CDHR5	HGNC	ENSG00000099834				56	0	0	39	18	31.5789
GPR137	0	genome.wustl.edu	37	11	64054075	64054075	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	64054075	64054075	A	G	SNP	GPR137	ENST00000313074	human	ensembl	74_37	+1	known	missense	c.79	p.T27A	1.000	NULL	NULL	-	no_errors	GPR137	HGNC	ENSG00000173264				115	0	0	79	29	26.8519
NRXN2	0	genome.wustl.edu	37	11	64419047	64419047	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	64419047	64419047	C	T	SNP	NRXN2	ENST00000265459	human	ensembl	74_37	-1	known	silent	c.2598	p.T866	0.006	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076				52	0	0	62	4	6.06061
PPP2R5B	0	genome.wustl.edu	37	11	64701224	64701224	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	64701224	64701224	C	T	SNP	PPP2R5B	ENST00000164133	human	ensembl	74_37	+1	known	missense	c.1402	p.R468W	1.000	pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5B	HGNC	ENSG00000068971				10	0	0	4	3	42.8571
CAPN1	0	genome.wustl.edu	37	11	64972252	64972252	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	64972252	64972252	G	A	SNP	CAPN1	ENST00000279247	human	ensembl	74_37	+1	known	missense	c.1264	p.A422T	0.996	pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Calpain_III	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN1	HGNC	ENSG00000014216				66	0	0	60	34	36.1702
PCNXL3	0	genome.wustl.edu	37	11	65386337	65386337	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	65386337	65386337	C	T	SNP	PCNXL3	ENST00000355703	human	ensembl	74_37	+1	known	missense	c.1504	p.R502C	1.000	NULL	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136				23	0	0	19	12	38.7097
CST6	0	genome.wustl.edu	37	11	65780296	65780296	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	65780296	65780296	G	A	SNP	CST6	ENST00000312134	human	ensembl	74_37	+1	known	splice_site	c.241-1	e2-1	1.000	-	-	-	no_errors	CST6	HGNC	ENSG00000175315				92	0	0	57	40	41.2371
SF3B2	0	genome.wustl.edu	37	11	65822672	65822672	+	Silent	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	65822672	65822672	G	C	SNP	SF3B2	ENST00000322535	human	ensembl	74_37	+1	known	silent	c.384	p.G128	0.977	NULL	pfam_DUF382,pfam_PSP,pfam_SAP_dom,smart_SAP_dom,smart_PSP,pfscan_SAP_dom	-	no_errors	SF3B2	HGNC	ENSG00000087365				60	0	0	48	26	35.1351
CD248	0	genome.wustl.edu	37	11	66082550	66082550	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	66082550	66082550	C	T	SNP	CD248	ENST00000311330	human	ensembl	74_37	-1	known	missense	c.1949	p.G650D	0.005	NULL	pfam_C-type_lectin,pfam_EGF-like_Ca-bd_dom,superfamily_C-type_lectin_fold,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_C-type_lectin	-	no_errors	CD248	HGNC	ENSG00000174807				91	0	0	55	26	32.0988
SLC29A2	0	genome.wustl.edu	37	11	66136992	66136992	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	66136992	66136992	C	T	SNP	SLC29A2	ENST00000357440	human	ensembl	74_37	-1	known	silent	c.123	p.A41	0.733	superfamily_MFS_dom_general_subst_transpt,tigrfam_Eqnu_transpt	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt,tigrfam_Eqnu_transpt	-	no_errors	SLC29A2	HGNC	ENSG00000174669				253	0	0	177	109	38.1119
PELI3	0	genome.wustl.edu	37	11	66238753	66238753	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	66238753	66238753	C	T	SNP	PELI3	ENST00000320740	human	ensembl	74_37	+1	known	nonsense	c.265	p.R89*	0.989	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI3	HGNC	ENSG00000174516				162	0	0	169	81	32.4
PELI3	0	genome.wustl.edu	37	11	66238826	66238826	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	66238826	66238826	C	T	SNP	PELI3	ENST00000320740	human	ensembl	74_37	+1	known	missense	c.338	p.T113M	0.951	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI3	HGNC	ENSG00000174516				71	0	0	65	43	39.8148
DPP3	0	genome.wustl.edu	37	11	66258805	66258805	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	66258805	66258805	A	G	SNP	DPP3	ENST00000360510	human	ensembl	74_37	+1	known	missense	c.749	p.D250G	1.000	pirsf_Dipeptidyl-peptase3	pirsf_Dipeptidyl-peptase3	-	no_errors	DPP3	HGNC	ENSG00000254986				111	0	0	74	31	29.5238
SPTBN2	0	genome.wustl.edu	37	11	66460058	66460058	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	66460058	66460058	G	A	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	silent	c.5139	p.R1713	0.122	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898				59	0	0	47	17	26.5625
SPTBN2	0	genome.wustl.edu	37	11	66461675	66461675	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	66461675	66461675	G	A	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	missense	c.4438	p.R1480C	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898				89	0	0	49	24	32.8767
PC	0	genome.wustl.edu	37	11	66618613	66618613	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	66618613	66618613	C	T	SNP	PC	ENST00000393958	human	ensembl	74_37	-1	known	silent	c.2121	p.T707	0.953	pfam_PYR_CT,pirsf_Pyruv_COase,pfscan_PYR_CT,tigrfam_Pyruv_COase	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_Carboxylase_cons_dom,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_PYR_CT,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pirsf_Pyruv_COase,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_PYR_CT,pfscan_Biotin_lipoyl,tigrfam_Pyruv_COase	-	no_errors	PC	HGNC	ENSG00000173599				116	0	0	56	51	47.6636
SYT12	0	genome.wustl.edu	37	11	66807455	66807455	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	66807455	66807455	C	A	SNP	SYT12	ENST00000393946	human	ensembl	74_37	+1	known	silent	c.402	p.A134	0.206	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYT12	HGNC	ENSG00000173227				86	0	0	88	6	6.38298
IGHMBP2	0	genome.wustl.edu	37	11	68675696	68675696	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	68675696	68675696	G	C	SNP	IGHMBP2	ENST00000255078	human	ensembl	74_37	+1	known	missense	c.340	p.V114L	0.287	tigrfam_DNA_helicase_put	pfam_R3H_ss-bd,pfam_Znf_AN1,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_R3H_ss-bd,smart_Znf_AN1,pfscan_Znf_AN1,pfscan_R3H_ss-bd,tigrfam_DNA_helicase_put	-	no_errors	IGHMBP2	HGNC	ENSG00000132740				129	0	0	96	36	27.2727
CTTN	0	genome.wustl.edu	37	11	70266592	70266592	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	70266592	70266592	T	A	SNP	CTTN	ENST00000301843	human	ensembl	74_37	+1	known	missense	c.766	p.L256M	0.000	pfam_Hs1_Cortactin,pfscan_Hs1_Cortactin	pfam_Hs1_Cortactin,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_Hs1_Cortactin,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	CTTN	HGNC	ENSG00000085733				100	0	0	48	29	37.6623
PDE2A	0	genome.wustl.edu	37	11	72295262	72295262	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	72295262	72295262	C	T	SNP	PDE2A	ENST00000334456	human	ensembl	74_37	-1	known	missense	c.1633	p.G545S	1.000	pfam_GAF,smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE2A	HGNC	ENSG00000186642				38	0	0	26	21	44.6809
FCHSD2	0	genome.wustl.edu	37	11	72600987	72600987	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	72600987	72600987	G	A	SNP	FCHSD2	ENST00000409418	human	ensembl	74_37	-1	known	nonsense	c.928	p.R310*	1.000	NULL	pfam_SH3_domain,pfam_FCH_dom,pfam_SH3_2,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	FCHSD2	HGNC	ENSG00000137478				23	0	0	14	7	33.3333
C2CD3	0	genome.wustl.edu	37	11	73809298	73809298	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	73809298	73809298	T	C	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	missense	c.2735	p.D912G	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014				103	0	0	42	24	36.3636
C2CD3	0	genome.wustl.edu	37	11	73811695	73811695	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	73811695	73811695	T	C	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	silent	c.2607	p.K869	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014				77	0	0	41	23	35.9375
POLD3	0	genome.wustl.edu	37	11	74347278	74347278	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	74347278	74347278	G	A	SNP	POLD3	ENST00000263681	human	ensembl	74_37	+1	known	missense	c.1156	p.V386I	0.839	pfam_DNA_polymerase_subunit_Cdc27	pfam_DNA_polymerase_subunit_Cdc27	-	no_errors	POLD3	HGNC	ENSG00000077514				60	0	0	14	15	51.7241
NEU3	0	genome.wustl.edu	37	11	74705645	74705645	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	74705645	74705645	G	A	SNP	NEU3	ENST00000294064	human	ensembl	74_37	+1	known	silent	c.186	p.L62	1.000	superfamily_Sialidases	superfamily_Sialidases	-	no_errors	NEU3	HGNC	ENSG00000162139				123	0	0	94	55	36.9128
CAPN5	0	genome.wustl.edu	37	11	76829322	76829322	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	76829322	76829322	C	T	SNP	CAPN5	ENST00000278559	human	ensembl	74_37	+1	known	missense	c.1091	p.T364M	0.075	pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Calpain_III	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN5	HGNC	ENSG00000149260				24	0	0	31	17	35.4167
MYO7A	0	genome.wustl.edu	37	11	76893012	76893012	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	76893012	76893012	C	T	SNP	MYO7A	ENST00000409709	human	ensembl	74_37	+1	known	missense	c.2920	p.R974W	0.277	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_FERM_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7A	HGNC	ENSG00000137474				82	0	0	49	17	25.7576
INTS4	0	genome.wustl.edu	37	11	77669839	77669839	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	77669839	77669839	A	G	SNP	INTS4	ENST00000534064	human	ensembl	74_37	-1	known	silent	c.750	p.S250	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	INTS4	HGNC	ENSG00000149262				35	0	0	21	6	22.2222
GAB2	0	genome.wustl.edu	37	11	77937657	77937657	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	77937657	77937657	C	G	SNP	GAB2	ENST00000361507	human	ensembl	74_37	-1	known	missense	c.1061	p.R354P	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB2	HGNC	ENSG00000033327				103	1	0.961538	48	36	42.8571
PIDD	0	genome.wustl.edu	37	11	800556	800556	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	800556	800556	G	A	SNP	PIDD	ENST00000347755	human	ensembl	74_37	-1	known	silent	c.2028	p.I676	0.006	NULL	pfam_Peptidase_S68_pidd,pfam_Death_domain,pfam_Leu-rich_rpt,pfam_ZU5,superfamily_DEATH-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Death_domain,pfscan_Death_domain,pfscan_ZU5	-	no_errors	PIDD	HGNC	ENSG00000177595				54	0	0	36	16	30.7692
ANKRD42	0	genome.wustl.edu	37	11	82947533	82947533	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	82947533	82947533	C	A	SNP	ANKRD42	ENST00000393392	human	ensembl	74_37	+1	known	missense	c.917	p.P306H	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD42	HGNC	ENSG00000137494				24	0	0	12	10	45.4545
EFCAB4A	0	genome.wustl.edu	37	11	831623	831623	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	831623	831623	C	T	SNP	EFCAB4A	ENST00000525077	human	ensembl	74_37	+1	novel	missense	c.1114	p.R372C	0.000	NULL	pfscan_EF_hand_dom	-	no_errors	EFCAB4A	HGNC	ENSG00000177685				13	0	0	9	7	43.75
TYR	0	genome.wustl.edu	37	11	88911656	88911656	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	88911656	88911656	A	T	SNP	TYR	ENST00000263321	human	ensembl	74_37	+1	known	missense	c.535	p.M179L	1.000	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYR	HGNC	ENSG00000077498				186	0	0	104	35	25.1799
FAT3	0	genome.wustl.edu	37	11	92600035	92600035	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	92600035	92600035	G	A	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.11787	p.T3929	0.246	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				28	0	0	25	13	34.2105
HEPHL1	0	genome.wustl.edu	37	11	93844981	93844981	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	93844981	93844981	C	G	SNP	HEPHL1	ENST00000315765	human	ensembl	74_37	+1	known	missense	c.3401	p.S1134C	0.000	NULL	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPHL1	HGNC	ENSG00000181333				211	0	0	107	60	35.9281
CLEC12B	0	genome.wustl.edu	37	12	10163381	10163381	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	10163381	10163381	C	T	SNP	CLEC12B	ENST00000338896	human	ensembl	74_37	+1	known	missense	c.23	p.A8V	0.240	NULL	pfam_C-type_lectin,pfam_Ly49,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC12B	HGNC	ENSG00000256660				54	0	0	22	11	33.3333
KLRK1	0	genome.wustl.edu	37	12	10532363	10532363	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	10532363	10532363	G	A	SNP	KLRK1	ENST00000240618	human	ensembl	74_37	-1	known	silent	c.177	p.I59	0.408	pfam_Herpes_UL45-like	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	KLRK1	HGNC	ENSG00000213809				45	0	0	19	6	24
KIAA1033	0	genome.wustl.edu	37	12	105535024	105535024	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	105535024	105535024	G	A	SNP	KIAA1033	ENST00000332180	human	ensembl	74_37	+1	known	missense	c.1787	p.R596Q	1.000	NULL	NULL	-	no_errors	KIAA1033	HGNC	ENSG00000136051				114	0	0	80	31	27.9279
USP30	0	genome.wustl.edu	37	12	109509471	109509471	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	109509471	109509471	C	T	SNP	USP30	ENST00000257548	human	ensembl	74_37	+1	known	missense	c.535	p.R179C	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP30	HGNC	ENSG00000135093				63	0	0	37	19	33.9286
ACACB	0	genome.wustl.edu	37	12	109703279	109703279	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	109703279	109703279	G	A	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	missense	c.7199	p.R2400H	0.619	NULL	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555				30	0	0	25	19	43.1818
GPN3	0	genome.wustl.edu	37	12	110902984	110902984	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	110902984	110902984	T	C	SNP	GPN3	ENST00000543199	human	ensembl	74_37	-1	known	silent	c.201	p.E67	1.000	pfam_Uncharacterised_ATP-bd,superfamily_P-loop_NTPase	pfam_Uncharacterised_ATP-bd,superfamily_P-loop_NTPase	-	no_errors	GPN3	HGNC	ENSG00000111231				98	0	0	42	26	38.2353
MAPKAPK5	0	genome.wustl.edu	37	12	112323793	112323793	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	112323793	112323793	G	A	SNP	MAPKAPK5	ENST00000551404	human	ensembl	74_37	+1	known	missense	c.922	p.E308K	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAPKAPK5	HGNC	ENSG00000089022				111	0	0	61	45	42.4528
NAA25	0	genome.wustl.edu	37	12	112480910	112480910	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	112480910	112480910	G	A	SNP	NAA25	ENST00000261745	human	ensembl	74_37	-1	known	silent	c.2356	p.L786	1.000	NULL	pfam_N-acetylTrfase_B_cplx_non-cat,pfscan_TPR-contain_dom	-	no_errors	NAA25	HGNC	ENSG00000111300				70	0	0	28	23	45.098
RASAL1	0	genome.wustl.edu	37	12	113541998	113541998	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	113541998	113541998	C	A	SNP	RASAL1	ENST00000546530	human	ensembl	74_37	-1	known	missense	c.1939	p.G647W	0.925	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RasGAP,pfam_C2_dom,pfam_Znf_Btk_motif,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_C2_dom,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP	-	no_errors	RASAL1	HGNC	ENSG00000111344				33	0	0	28	2	6.66667
NOS1	0	genome.wustl.edu	37	12	117660629	117660629	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	117660629	117660629	C	T	SNP	NOS1	ENST00000317775	human	ensembl	74_37	-1	known	missense	c.3866	p.R1289Q	1.000	pfam_OxRdtase_FAD/NAD-bd,pirsf_NOS_euk,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_euk,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250				136	0	0	81	43	34.6774
NOS1	0	genome.wustl.edu	37	12	117672531	117672531	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	117672531	117672531	T	A	SNP	NOS1	ENST00000317775	human	ensembl	74_37	-1	known	missense	c.3074	p.N1025I	1.000	pfam_FAD-binding_1,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_euk,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250				31	0	0	29	11	27.5
HSPB8	0	genome.wustl.edu	37	12	119617264	119617264	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	119617264	119617264	C	T	SNP	HSPB8	ENST00000281938	human	ensembl	74_37	+1	known	silent	c.147	p.P49	0.034	NULL	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	HSPB8	HGNC	ENSG00000152137				233	0	0	198	58	22.6562
CCDC60	0	genome.wustl.edu	37	12	119966530	119966530	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	119966530	119966530	C	T	SNP	CCDC60	ENST00000327554	human	ensembl	74_37	+1	known	missense	c.1340	p.A447V	0.986	NULL	NULL	-	no_errors	CCDC60	HGNC	ENSG00000183273				116	0	0	57	26	31.3253
HNF1A	0	genome.wustl.edu	37	12	121434123	121434123	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	121434123	121434123	C	T	SNP	HNF1A	ENST00000538646	human	ensembl	74_37	+1	known	missense	c.827	p.A276V	0.032	NULL	pfam_HNF-1_N,superfamily_Lambda_DNA-bd_dom,superfamily_HNF1_dimer_dom	-	no_errors	HNF1A	HGNC	ENSG00000135100				129	0	0	93	64	40.7643
KNTC1	0	genome.wustl.edu	37	12	123099621	123099621	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	123099621	123099621	G	A	SNP	KNTC1	ENST00000333479	human	ensembl	74_37	+1	known	silent	c.5961	p.L1987	0.279	pfam_RZZ-complex_KNTC1/ROD_C	pfam_RZZ-complex_KNTC1/ROD_C,superfamily_Quino_amine_DH_bsu,superfamily_WD40_repeat_dom,superfamily_PAH	-	no_errors	KNTC1	HGNC	ENSG00000184445				24	0	0	11	6	35.2941
MPHOSPH9	0	genome.wustl.edu	37	12	123687615	123687615	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	123687615	123687615	G	T	SNP	MPHOSPH9	ENST00000392425	human	ensembl	74_37	-1	known	missense	c.881	p.P294H	0.980	NULL	superfamily_Prefoldin	-	no_errors	MPHOSPH9	HGNC	ENSG00000051825				130	1	0.763359	83	30	26.5487
TMEM132D	0	genome.wustl.edu	37	12	129559375	129559375	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	129559375	129559375	C	T	SNP	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	missense	c.2345	p.R782Q	1.000	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952				117	0	0	68	40	37.037
GPR133	0	genome.wustl.edu	37	12	131487823	131487823	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	131487823	131487823	G	T	SNP	GPR133	ENST00000261654	human	ensembl	74_37	+1	known	missense	c.1120	p.V374L	0.008	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR133	HGNC	ENSG00000111452				102	0	0	70	42	37.5
SFSWAP	0	genome.wustl.edu	37	12	132199409	132199409	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	132199409	132199409	G	T	SNP	SFSWAP	ENST00000261674	human	ensembl	74_37	+1	known	missense	c.431	p.G144V	1.000	pfam_SWAP_N_domain	pfam_SWAP_N_domain,pfam_Surp,superfamily_Surp,smart_Surp,pfscan_Surp	-	no_errors	SFSWAP	HGNC	ENSG00000061936				86	0	0	84	7	7.69231
POLE	0	genome.wustl.edu	37	12	133241895	133241895	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	133241895	133241895	G	A	SNP	POLE	ENST00000320574	human	ensembl	74_37	-1	known	missense	c.2461	p.R821C	1.000	pfam_DNA-dir_DNA_pol_B_multi_dom,smart_DNA-dir_DNA_pol_B	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084				194	0	0	118	73	38.2199
GOLGA3	0	genome.wustl.edu	37	12	133360752	133360752	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	133360752	133360752	C	T	SNP	GOLGA3	ENST00000204726	human	ensembl	74_37	-1	known	missense	c.3265	p.E1089K	1.000	NULL	superfamily_Prefoldin	-	no_errors	GOLGA3	HGNC	ENSG00000090615				42	0	0	39	14	26.4151
CHFR	0	genome.wustl.edu	37	12	133428223	133428223	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	133428223	133428223	C	T	SNP	CHFR	ENST00000266880	human	ensembl	74_37	-1	known	silent	c.1506	p.P502	0.025	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_Znf_RING,pfscan_FHA_dom,pfscan_Znf_RING	-	no_errors	CHFR	HGNC	ENSG00000072609				195	0	0	145	89	38.0342
PTPRO	0	genome.wustl.edu	37	12	15654773	15654773	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	15654773	15654773	C	T	SNP	PTPRO	ENST00000281171	human	ensembl	74_37	+1	known	missense	c.881	p.T294M	0.948	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRO	HGNC	ENSG00000151490				40	0	0	35	13	27.0833
STRAP	0	genome.wustl.edu	37	12	16042873	16042873	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	16042873	16042873	A	G	SNP	STRAP	ENST00000025399	human	ensembl	74_37	+1	known	missense	c.299	p.D100G	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	STRAP	HGNC	ENSG00000023734				60	0	0	38	21	35.5932
CMAS	0	genome.wustl.edu	37	12	22218104	22218104	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	22218104	22218104	C	T	SNP	CMAS	ENST00000229329	human	ensembl	74_37	+1	known	silent	c.1164	p.G388	0.006	superfamily_HAD-like_dom	pfam_Cytidylyl_trans,superfamily_HAD-like_dom	-	no_errors	CMAS	HGNC	ENSG00000111726				160	0	0	94	64	40.5063
ITPR2	0	genome.wustl.edu	37	12	26568380	26568380	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	26568380	26568380	C	T	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	missense	c.7162	p.V2388I	1.000	pfam_Ion_trans_dom	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104				142	1	0.699301	86	51	37.2263
FOXM1	0	genome.wustl.edu	37	12	2981273	2981273	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	2981273	2981273	G	A	SNP	FOXM1	ENST00000342628	human	ensembl	74_37	-1	known	nonsense	c.643	p.R215*	0.698	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXM1	HGNC	ENSG00000111206				425	0	0	257	145	36.0697
CAPRIN2	0	genome.wustl.edu	37	12	30863196	30863196	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	30863196	30863196	C	T	SNP	CAPRIN2	ENST00000251071	human	ensembl	74_37	-1	known	silent	c.3024	p.L1008	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_Caprin-1_C,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CAPRIN2	HGNC	ENSG00000110888				137	0	0	95	51	34.9315
ALG10B	0	genome.wustl.edu	37	12	38714014	38714014	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	38714014	38714014	C	T	SNP	ALG10B	ENST00000308742	human	ensembl	74_37	+1	known	missense	c.421	p.P141S	1.000	pfam_Alg10,pirsf_Alg10	pfam_Alg10,pirsf_Alg10	-	no_errors	ALG10B	HGNC	ENSG00000175548				113	0	0	53	16	23.1884
SLC38A2	0	genome.wustl.edu	37	12	46758904	46758904	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	46758904	46758904	A	G	SNP	SLC38A2	ENST00000256689	human	ensembl	74_37	-1	known	missense	c.632	p.L211P	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A2	HGNC	ENSG00000134294				100	0	0	72	32	30.7692
NDUFA9	0	genome.wustl.edu	37	12	4764054	4764054	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	4764054	4764054	G	A	SNP	NDUFA9	ENST00000266544	human	ensembl	74_37	+1	known	missense	c.284	p.R95H	0.993	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_NmrA	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_NmrA	-	no_errors	NDUFA9	HGNC	ENSG00000139180				60	0	0	38	11	22.449
DHH	0	genome.wustl.edu	37	12	49485071	49485071	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	49485071	49485071	G	A	SNP	DHH	ENST00000266991	human	ensembl	74_37	-1	known	silent	c.405	p.H135	1.000	pfam_Hedgehog_signaling_dom,superfamily_Hedgehog_sig/DD-Pept_Zn-bd_dom,pirsf_Hedgehog,prints_Hedgehog	pfam_Hedgehog_signaling_dom,pfam_Hint_dom,superfamily_Hedgehog_sig/DD-Pept_Zn-bd_dom,smart_Hint_dom_N,smart_Hint_dom_C,pirsf_Hedgehog,prints_Hedgehog	-	no_errors	DHH	HGNC	ENSG00000139549				111	0	0	84	44	34.375
C1QL4	0	genome.wustl.edu	37	12	49729949	49729949	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	49729949	49729949	G	A	SNP	C1QL4	ENST00000334221	human	ensembl	74_37	-1	known	silent	c.312	p.A104	0.024	smart_C1q	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QL4	HGNC	ENSG00000186897				31	0	0	23	6	20.6897
DIP2B	0	genome.wustl.edu	37	12	51117073	51117073	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	51117073	51117073	G	A	SNP	DIP2B	ENST00000301180	human	ensembl	74_37	+1	known	silent	c.3255	p.T1085	0.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2B	HGNC	ENSG00000066084				101	0	0	56	34	37.7778
GALNT6	0	genome.wustl.edu	37	12	51751183	51751183	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	51751183	51751183	C	T	SNP	GALNT6	ENST00000356317	human	ensembl	74_37	-1	known	missense	c.1552	p.G518R	0.968	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT6	HGNC	ENSG00000139629				78	0	0	71	33	31.7308
KRT6A	0	genome.wustl.edu	37	12	52884727	52884727	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	52884727	52884727	G	A	SNP	KRT6A	ENST00000330722	human	ensembl	74_37	-1	known	missense	c.827	p.A276V	1.000	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6A	HGNC	ENSG00000205420				52	0	0	35	22	38.5965
LOC100127967	0	genome.wustl.edu	37	12	53004853	53004853	+	RNA	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	53004853	53004853	T	C	SNP	LOC100127967	ENST00000552364	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-641A6.2	Clone_based_vega_gene	ENSG00000257495				24	0	0	17	10	37.037
CCDC77	0	genome.wustl.edu	37	12	550953	550953	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	550953	550953	C	T	SNP	CCDC77	ENST00000239830	human	ensembl	74_37	+1	known	missense	c.1334	p.A445V	0.000	NULL	NULL	-	no_errors	CCDC77	HGNC	ENSG00000120647				88	0	0	54	35	39.3258
TESPA1	0	genome.wustl.edu	37	12	55356262	55356262	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	55356262	55356262	G	A	SNP	TESPA1	ENST00000316577	human	ensembl	74_37	-1	known	missense	c.1420	p.R474C	0.001	NULL	NULL	-	no_errors	TESPA1	HGNC	ENSG00000135426				220	0	0	120	69	36.5079
ITGA7	0	genome.wustl.edu	37	12	56091499	56091499	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	56091499	56091499	A	G	SNP	ITGA7	ENST00000555728	human	ensembl	74_37	-1	known	silent	c.1521	p.A507	0.297	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA7	HGNC	ENSG00000135424				84	0	0	94	13	12.1495
DGKA	0	genome.wustl.edu	37	12	56346914	56346914	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	56346914	56346914	G	A	SNP	DGKA	ENST00000331886	human	ensembl	74_37	+1	known	missense	c.2033	p.R678Q	1.000	pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKA	HGNC	ENSG00000065357				110	0	0	72	26	26.5306
ERBB3	0	genome.wustl.edu	37	12	56482607	56482607	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	56482607	56482607	C	T	SNP	ERBB3	ENST00000267101	human	ensembl	74_37	+1	known	missense	c.1064	p.T355I	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Furin-like_Cys-rich_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB3	HGNC	ENSG00000065361				189	0	0	104	53	33.758
NABP2	0	genome.wustl.edu	37	12	56619283	56619283	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	56619283	56619283	G	A	SNP	NABP2	ENST00000267023	human	ensembl	74_37	+1	known	missense	c.206	p.R69Q	1.000	pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold	pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold	-	no_errors	NABP2	HGNC	ENSG00000139579				98	0	0	68	26	27.6596
IL23A	0	genome.wustl.edu	37	12	56733791	56733791	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	56733791	56733791	G	A	SNP	IL23A	ENST00000228534	human	ensembl	74_37	+1	known	missense	c.473	p.R158H	0.994	pfam_IL-6/IL-23/GCSF/MGF,superfamily_4_helix_cytokine-like_core	pfam_IL-6/IL-23/GCSF/MGF,superfamily_4_helix_cytokine-like_core	-	no_errors	IL23A	HGNC	ENSG00000110944				145	0	0	106	66	38.3721
GPR182	0	genome.wustl.edu	37	12	57389178	57389178	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	57389178	57389178	C	T	SNP	GPR182	ENST00000300098	human	ensembl	74_37	+1	known	missense	c.185	p.A62V	0.998	prints_GPCR_Rhodpsn,prints_ATII_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_G10D_rcpt,prints_GPCR_Rhodpsn,prints_ATII_rcpt	-	no_errors	GPR182	HGNC	ENSG00000166856				200	0	0	119	75	38.6598
KIF5A	0	genome.wustl.edu	37	12	57963431	57963431	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	57963431	57963431	C	T	SNP	KIF5A	ENST00000455537	human	ensembl	74_37	+1	known	missense	c.1082	p.A361V	0.994	superfamily_P-loop_NTPase	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5A	HGNC	ENSG00000155980				64	0	0	34	22	39.2857
KIF5A	0	genome.wustl.edu	37	12	57965968	57965968	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	57965968	57965968	T	C	SNP	KIF5A	ENST00000455537	human	ensembl	74_37	+1	known	missense	c.1487	p.V496A	0.815	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5A	HGNC	ENSG00000155980				26	0	0	14	12	46.1538
PIP4K2C	0	genome.wustl.edu	37	12	57994645	57994645	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	57994645	57994645	G	A	SNP	PIP4K2C	ENST00000354947	human	ensembl	74_37	+1	known	missense	c.865	p.D289N	1.000	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP4K2C	HGNC	ENSG00000166908				335	0	0	325	19	5.52326
LRIG3	0	genome.wustl.edu	37	12	59267917	59267917	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	59267917	59267917	T	A	SNP	LRIG3	ENST00000320743	human	ensembl	74_37	-1	known	missense	c.3035	p.N1012I	0.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG3	HGNC	ENSG00000139263				69	0	0	63	4	5.97015
VAMP1	0	genome.wustl.edu	37	12	6571964	6571964	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	6571964	6571964	G	A	SNP	VAMP1	ENST00000544432	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	VAMP1	HGNC	ENSG00000139190				19	0	0	12	5	29.4118
IFFO1	0	genome.wustl.edu	37	12	6649716	6649716	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	6649716	6649716	G	T	SNP	IFFO1	ENST00000356896	human	ensembl	74_37	-1	known	missense	c.1625	p.P542Q	1.000	NULL	NULL	-	no_errors	IFFO1	HGNC	ENSG00000010295				98	0	0	61	20	24.6914
IFFO1	0	genome.wustl.edu	37	12	6650743	6650743	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	6650743	6650743	G	A	SNP	IFFO1	ENST00000356896	human	ensembl	74_37	-1	known	silent	c.1521	p.S507	1.000	NULL	NULL	-	no_errors	IFFO1	HGNC	ENSG00000010295				123	0	0	107	47	30.5195
NOP2	0	genome.wustl.edu	37	12	6672657	6672657	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	6672657	6672657	G	A	SNP	NOP2	ENST00000322166	human	ensembl	74_37	-1	known	nonsense	c.712	p.R238*	0.007	NULL	pfam_Fmu/NOL1/Nop2p,pfam_P120R,pfam_rRNA_MeTrfase_FtsJ_dom,prints_RCMT,prints_RCMT_NOP2,tigrfam_Nop2p	-	no_errors	NOP2	HGNC	ENSG00000111641				22	0	0	14	7	33.3333
CHD4	0	genome.wustl.edu	37	12	6682399	6682399	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	6682399	6682399	G	A	SNP	CHD4	ENST00000309577	human	ensembl	74_37	-1	known	missense	c.5482	p.R1828C	1.000	pfam_CHD_C2	pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD4	HGNC	ENSG00000111642				99	0	0	53	28	34.5679
CHD4	0	genome.wustl.edu	37	12	6691863	6691863	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	6691863	6691863	G	A	SNP	CHD4	ENST00000309577	human	ensembl	74_37	-1	known	nonsense	c.4372	p.R1458*	1.000	pfam_DUF1086,superfamily_Homeodomain-like	pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD4	HGNC	ENSG00000111642				180	1	0.552486	149	50	25.1256
DYRK2	0	genome.wustl.edu	37	12	68051469	68051469	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	68051469	68051469	G	A	SNP	DYRK2	ENST00000344096	human	ensembl	74_37	+1	known	missense	c.782	p.R261Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK2	HGNC	ENSG00000127334				94	0	0	76	32	29.6296
KCNC2	0	genome.wustl.edu	37	12	75601598	75601598	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	75601598	75601598	G	A	SNP	KCNC2	ENST00000549446	human	ensembl	74_37	-1	known	missense	c.166	p.P56S	0.993	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC2	HGNC	ENSG00000166006				29	0	0	31	19	38
CD163L1	0	genome.wustl.edu	37	12	7586129	7586129	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	7586129	7586129	C	T	SNP	CD163L1	ENST00000313599	human	ensembl	74_37	-1	known	missense	c.286	p.A96T	0.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD163L1	HGNC	ENSG00000177675				91	0	0	69	20	22.4719
KRR1	0	genome.wustl.edu	37	12	75900336	75900336	+	Silent	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	75900336	75900336	A	C	SNP	KRR1	ENST00000229214	human	ensembl	74_37	-1	known	silent	c.447	p.S149	1.000	smart_KH_dom	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	KRR1	HGNC	ENSG00000111615				85	0	0	35	6	14.6341
AICDA	0	genome.wustl.edu	37	12	8757859	8757859	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	8757859	8757859	G	A	SNP	AICDA	ENST00000229335	human	ensembl	74_37	-1	known	missense	c.379	p.R127W	0.981	pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	AICDA	HGNC	ENSG00000111732				47	0	0	23	9	28.125
PHC1	0	genome.wustl.edu	37	12	9083336	9083336	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	9083336	9083336	A	G	SNP	PHC1	ENST00000543824	human	ensembl	74_37	+1	known	silent	c.918	p.R306	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_Znf_MYM,superfamily_SAM/pointed,smart_SAM,pfscan_SAM,pfscan_Znf_FCS	-	no_errors	PHC1	HGNC	ENSG00000111752				14	0	0	10	6	37.5
PLXNC1	0	genome.wustl.edu	37	12	94543038	94543038	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	94543038	94543038	G	A	SNP	PLXNC1	ENST00000258526	human	ensembl	74_37	+1	known	silent	c.291	p.A97	1.000	superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Plexin_repeat,pfam_IPT,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Plexin-like_fold,superfamily_Ig_E-set,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNC1	HGNC	ENSG00000136040				12	0	0	11	11	50
CCDC41	0	genome.wustl.edu	37	12	94725550	94725550	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	94725550	94725550	G	A	SNP	CCDC41	ENST00000339839	human	ensembl	74_37	-1	known	missense	c.1633	p.R545C	0.976	NULL	NULL	-	no_errors	CCDC41	HGNC	ENSG00000173588				158	1	0.628931	92	14	13.2075
CCDC38	0	genome.wustl.edu	37	12	96300224	96300224	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	96300224	96300224	C	T	SNP	CCDC38	ENST00000344280	human	ensembl	74_37	-1	known	missense	c.310	p.D104N	0.968	NULL	NULL	-	no_errors	CCDC38	HGNC	ENSG00000165972				67	0	0	33	13	28.2609
NALCN	0	genome.wustl.edu	37	13	101714451	101714451	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	101714451	101714451	C	T	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.4624	p.V1542M	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452				44	0	0	26	16	38.0952
ATP4B	0	genome.wustl.edu	37	13	114307279	114307279	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	114307279	114307279	G	A	SNP	ATP4B	ENST00000335288	human	ensembl	74_37	-1	known	missense	c.464	p.T155M	0.832	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	-	no_errors	ATP4B	HGNC	ENSG00000186009				74	0	0	49	29	37.1795
TUBA3C	0	genome.wustl.edu	37	13	19751183	19751183	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	19751183	19751183	C	T	SNP	TUBA3C	ENST00000400113	human	ensembl	74_37	-1	known	missense	c.940	p.A314T	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033				183	0	0	160	68	29.8246
SPATA13	0	genome.wustl.edu	37	13	24876890	24876890	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	24876890	24876890	G	A	SNP	SPATA13	ENST00000382108	human	ensembl	74_37	+1	known	silent	c.3813	p.R1271	0.301	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	SPATA13	HGNC	ENSG00000182957				146	0	0	94	57	37.7483
RNF6	0	genome.wustl.edu	37	13	26792713	26792713	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	26792713	26792713	C	T	SNP	RNF6	ENST00000346166	human	ensembl	74_37	-1	known	missense	c.224	p.R75Q	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF6	HGNC	ENSG00000127870				166	0	0	72	24	25
FLT3	0	genome.wustl.edu	37	13	28608309	28608309	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	28608309	28608309	C	T	SNP	FLT3	ENST00000380982	human	ensembl	74_37	-1	known	missense	c.1747	p.G583S	0.996	superfamily_Kinase-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FLT3	HGNC	ENSG00000122025				38	0	0	25	9	26.4706
FLT1	0	genome.wustl.edu	37	13	28895660	28895660	+	Silent	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	28895660	28895660	A	T	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	silent	c.3114	p.I1038	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755				87	0	0	38	24	38.7097
FLT1	0	genome.wustl.edu	37	13	29001366	29001366	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	29001366	29001366	C	T	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	missense	c.1366	p.A456T	0.001	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755				122	0	0	89	6	6.31579
KL	0	genome.wustl.edu	37	13	33591206	33591206	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	33591206	33591206	C	T	SNP	KL	ENST00000380099	human	ensembl	74_37	+1	known	missense	c.628	p.R210C	0.996	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	KL	HGNC	ENSG00000133116				20	0	0	13	15	53.5714
PROSER1	0	genome.wustl.edu	37	13	39587976	39587976	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	39587976	39587976	C	T	SNP	PROSER1	ENST00000352251	human	ensembl	74_37	-1	known	silent	c.1413	p.A471	0.001	NULL	NULL	-	no_errors	PROSER1	HGNC	ENSG00000120685				73	0	0	76	8	9.52381
PCDH8	0	genome.wustl.edu	37	13	53420431	53420431	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	53420431	53420431	C	T	SNP	PCDH8	ENST00000377942	human	ensembl	74_37	-1	known	missense	c.2141	p.G714D	0.909	smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH8	HGNC	ENSG00000136099				17	0	0	14	7	33.3333
EDNRB	0	genome.wustl.edu	37	13	78493582	78493582	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	78493582	78493582	C	A	SNP	EDNRB	ENST00000377211	human	ensembl	74_37	-1	putative	nonsense	c.169	p.G57*	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ETB_rcpt,prints_Endthln_rcpt,prints_GPCR_Rhodpsn,prints_Bombsn_rcpt	-	no_errors	EDNRB	HGNC	ENSG00000136160				99	0	0	41	31	43.0556
SLITRK5	0	genome.wustl.edu	37	13	88328753	88328753	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	88328753	88328753	G	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	silent	c.1110	p.V370	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				102	0	0	68	24	26.087
SLITRK5	0	genome.wustl.edu	37	13	88329438	88329438	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	88329438	88329438	G	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	missense	c.1795	p.A599T	1.000	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				215	0	0	165	86	34.2629
MIR17HG	0	genome.wustl.edu	37	13	92002887	92002887	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	92002887	92002887	G	A	SNP	MIR17HG	ENST00000385012	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR17HG	HGNC	ENSG00000215417				124	0	0	64	36	36
GPC5	0	genome.wustl.edu	37	13	92101090	92101090	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	92101090	92101090	C	T	SNP	GPC5	ENST00000377067	human	ensembl	74_37	+1	known	missense	c.239	p.A80V	0.715	pfam_Glypican	pfam_Glypican	-	no_errors	GPC5	HGNC	ENSG00000179399				153	1	0.649351	60	35	36.8421
FARP1	0	genome.wustl.edu	37	13	98865614	98865614	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	98865614	98865614	G	A	SNP	FARP1	ENST00000376586	human	ensembl	74_37	+1	known	missense	c.118	p.V40M	0.992	smart_Band_41_domain,pfscan_FERM_domain	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM-adjacent,pfam_FERM_central,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP1	HGNC	ENSG00000152767				269	0	0	237	124	34.349
DYNC1H1	0	genome.wustl.edu	37	14	102494016	102494016	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	102494016	102494016	G	A	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	missense	c.9109	p.A3037T	1.000	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102				63	0	0	41	16	28.0702
DYNC1H1	0	genome.wustl.edu	37	14	102502908	102502908	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	102502908	102502908	A	G	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	missense	c.10837	p.S3613G	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102				131	0	0	58	45	43.6893
AMN	0	genome.wustl.edu	37	14	103390134	103390134	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	103390134	103390134	G	A	SNP	AMN	ENST00000299155	human	ensembl	74_37	+1	known	missense	c.130	p.A44T	0.892	NULL	NULL	-	no_errors	AMN	HGNC	ENSG00000166126				90	0	0	68	37	35.2381
CDC42BPB	0	genome.wustl.edu	37	14	103440432	103440432	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	103440432	103440432	C	T	SNP	CDC42BPB	ENST00000361246	human	ensembl	74_37	-1	known	missense	c.1562	p.R521H	0.984	NULL	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	CDC42BPB	HGNC	ENSG00000198752				71	0	0	45	25	35.7143
PLD4	0	genome.wustl.edu	37	14	105397224	105397224	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	105397224	105397224	G	A	SNP	PLD4	ENST00000392593	human	ensembl	74_37	+1	known	missense	c.863	p.R288H	0.062	NULL	pfam_PLipase_D/transphosphatidylase,smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD4	HGNC	ENSG00000166428				181	0	0	122	72	37.1134
AHNAK2	0	genome.wustl.edu	37	14	105412000	105412000	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	105412000	105412000	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.9788	p.T3263M	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				159	0	0	131	36	21.5569
AHNAK2	0	genome.wustl.edu	37	14	105412495	105412495	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	105412495	105412495	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.9293	p.T3098M	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				222	1	0.44843	194	68	25.9542
POTEM	0	genome.wustl.edu	37	14	20019842	20019842	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	20019842	20019842	C	T	SNP	POTEM	ENST00000547848	human	ensembl	74_37	-1	known	missense	c.379	p.A127T	0.005	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEM	HGNC	ENSG00000187537				241	0	0	255	86	25.2199
RNASE10	0	genome.wustl.edu	37	14	20978876	20978876	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	20978876	20978876	A	G	SNP	RNASE10	ENST00000328444	human	ensembl	74_37	+1	known	silent	c.246	p.E82	0.398	NULL	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE10	HGNC	ENSG00000182545				51	0	0	43	23	34.8485
C14orf93	0	genome.wustl.edu	37	14	23458986	23458986	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	23458986	23458986	G	A	SNP	C14orf93	ENST00000299088	human	ensembl	74_37	-1	known	missense	c.1049	p.T350I	1.000	NULL	NULL	-	no_errors	C14orf93	HGNC	ENSG00000100802				112	0	0	36	21	36.8421
CDH24	0	genome.wustl.edu	37	14	23518336	23518336	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	23518336	23518336	G	A	SNP	CDH24	ENST00000267383	human	ensembl	74_37	-1	known	silent	c.1860	p.D620	0.976	pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH24	HGNC	ENSG00000139880				13	0	0	8	8	50
IL25	0	genome.wustl.edu	37	14	23844958	23844958	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	23844958	23844958	C	T	SNP	IL25	ENST00000329715	human	ensembl	74_37	+1	known	missense	c.403	p.H135Y	1.000	pfam_IL-17_fam	pfam_IL-17_fam	-	no_errors	IL25	HGNC	ENSG00000166090				114	0	0	116	7	5.69106
MYH7	0	genome.wustl.edu	37	14	23884369	23884369	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	23884369	23884369	G	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	silent	c.5394	p.D1798	0.999	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054				142	0	0	101	52	33.9869
PRKD1	0	genome.wustl.edu	37	14	30194878	30194878	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	30194878	30194878	G	T	SNP	PRKD1	ENST00000331968	human	ensembl	74_37	-1	known	missense	c.267	p.F89L	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC	ENSG00000184304				64	0	0	58	6	9.375
TRIM9	0	genome.wustl.edu	37	14	51467458	51467458	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	51467458	51467458	C	T	SNP	TRIM9	ENST00000338969	human	ensembl	74_37	-1	known	silent	c.1395	p.T465	0.227	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_SPRY_rcpt,pfam_Fibronectin_type3,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM9	HGNC	ENSG00000100505				46	0	0	27	18	40
TRIM9	0	genome.wustl.edu	37	14	51477173	51477173	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	51477173	51477173	G	A	SNP	TRIM9	ENST00000338969	human	ensembl	74_37	-1	known	missense	c.1081	p.R361C	1.000	smart_Bbox_C	pfam_SPRY_rcpt,pfam_Fibronectin_type3,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM9	HGNC	ENSG00000100505				125	0	0	68	27	28.4211
TRIM9	0	genome.wustl.edu	37	14	51561501	51561501	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	51561501	51561501	C	T	SNP	TRIM9	ENST00000338969	human	ensembl	74_37	-1	known	missense	c.157	p.A53T	1.000	smart_Znf_RING	pfam_SPRY_rcpt,pfam_Fibronectin_type3,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM9	HGNC	ENSG00000100505				31	0	0	26	10	27.7778
PTGER2	0	genome.wustl.edu	37	14	52781592	52781592	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	52781592	52781592	G	A	SNP	PTGER2	ENST00000245457	human	ensembl	74_37	+1	known	missense	c.326	p.C109Y	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prostglndn_EP2_rcpt,prints_Prostanoid_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prostglndn_EP2_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	PTGER2	HGNC	ENSG00000125384				88	0	0	86	5	5.49451
SAMD4A	0	genome.wustl.edu	37	14	55169045	55169045	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	55169045	55169045	G	A	SNP	SAMD4A	ENST00000392067	human	ensembl	74_37	+1	known	silent	c.462	p.T154	0.003	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	-	no_errors	SAMD4A	HGNC	ENSG00000020577				118	0	0	67	40	37.3832
TBPL2	0	genome.wustl.edu	37	14	55907244	55907244	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	55907244	55907244	G	A	SNP	TBPL2	ENST00000247219	human	ensembl	74_37	-1	known	missense	c.20	p.P7L	0.000	NULL	pfam_TBP,prints_TBP	-	no_errors	TBPL2	HGNC	ENSG00000182521				47	0	0	31	22	41.5094
KTN1	0	genome.wustl.edu	37	14	56101377	56101377	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	56101377	56101377	G	A	SNP	KTN1	ENST00000395309	human	ensembl	74_37	+1	known	splice_site	c.1461+1	e8+1	1.000	-	-	-	no_errors	KTN1	HGNC	ENSG00000126777				30	0	0	15	14	48.2759
SLC35F4	0	genome.wustl.edu	37	14	58063406	58063406	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	58063406	58063406	T	C	SNP	SLC35F4	ENST00000339762	human	ensembl	74_37	-1	known	silent	c.210	p.L70	0.045	NULL	pfam_DMT,pfam_SLC35_F1/F2/F6	-	no_errors	SLC35F4	HGNC	ENSG00000151812				21	0	0	9	9	50
C14orf39	0	genome.wustl.edu	37	14	60938346	60938346	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	60938346	60938346	A	G	SNP	C14orf39	ENST00000321731	human	ensembl	74_37	-1	known	silent	c.435	p.H145	0.990	NULL	NULL	-	no_errors	C14orf39	HGNC	ENSG00000179008				41	0	0	17	3	15
SGPP1	0	genome.wustl.edu	37	14	64153092	64153092	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	64153092	64153092	C	T	SNP	SGPP1	ENST00000247225	human	ensembl	74_37	-1	known	missense	c.1057	p.A353T	0.000	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	SGPP1	HGNC	ENSG00000126821				78	0	0	43	21	32.8125
HSPA2	0	genome.wustl.edu	37	14	65007663	65007663	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	65007663	65007663	C	T	SNP	HSPA2	ENST00000247207	human	ensembl	74_37	+1	known	silent	c.96	p.N32	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA2	HGNC	ENSG00000126803				90	0	0	82	36	30.5085
GPHN	0	genome.wustl.edu	37	14	67490373	67490373	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	67490373	67490373	G	T	SNP	GPHN	ENST00000478722	human	ensembl	74_37	+1	known	missense	c.987	p.K329N	1.000	NULL	pfam_Mopterin-bd_dom,pfam_MoeA_linker/N,pfam_MoeA_C_domain_IV,superfamily_MoeA_linker/N,superfamily_Mopterin-bd_dom,superfamily_MoeA_C_domain_IV,smart_Mopterin-bd_dom,tigrfam_Mo_cofactor_synthesis	-	no_errors	GPHN	HGNC	ENSG00000171723				73	0	0	42	4	8.69565
ACTN1	0	genome.wustl.edu	37	14	69341789	69341789	+	Silent	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	69341789	69341789	G	C	SNP	ACTN1	ENST00000538545	human	ensembl	74_37	-1	novel	silent	c.2580	p.R860	0.000	NULL	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN1	HGNC	ENSG00000072110				12	0	0	15	5	25
PSEN1	0	genome.wustl.edu	37	14	73637650	73637650	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	73637650	73637650	G	A	SNP	PSEN1	ENST00000324501	human	ensembl	74_37	+1	known	missense	c.233	p.G78D	1.000	pfam_Peptidase_A22A	pfam_Peptidase_A22A,smart_Preselin/SPP,prints_Pept_A22A_PS1,prints_Peptidase_A22A	-	no_errors	PSEN1	HGNC	ENSG00000080815				65	0	0	31	19	38
PAPLN	0	genome.wustl.edu	37	14	73730965	73730965	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	73730965	73730965	G	A	SNP	PAPLN	ENST00000427855	human	ensembl	74_37	+1	known	missense	c.2908	p.A970T	0.008	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Prot_inh_Kunz-m,pfam_PLAC,superfamily_Prot_inh_Kunz-m,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Prot_inh_Kunz-m,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS,prints_Prot_inh_Kunz-m	-	no_errors	PAPLN	HGNC	ENSG00000100767				103	0	0	99	48	32.6531
ENTPD5	0	genome.wustl.edu	37	14	74454592	74454592	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	74454592	74454592	G	A	SNP	ENTPD5	ENST00000334696	human	ensembl	74_37	-1	known	missense	c.214	p.P72S	0.655	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD5	HGNC	ENSG00000187097				26	0	0	31	15	32.6087
VSX2	0	genome.wustl.edu	37	14	74726453	74726453	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	74726453	74726453	G	A	SNP	VSX2	ENST00000261980	human	ensembl	74_37	+1	known	missense	c.728	p.G243D	1.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	VSX2	HGNC	ENSG00000119614				51	0	0	55	21	27.6316
LTBP2	0	genome.wustl.edu	37	14	74973512	74973512	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	74973512	74973512	C	T	SNP	LTBP2	ENST00000261978	human	ensembl	74_37	-1	known	missense	c.3922	p.A1308T	0.997	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP2	HGNC	ENSG00000119681				60	0	0	31	21	40.3846
NEK9	0	genome.wustl.edu	37	14	75558161	75558161	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	75558161	75558161	C	T	SNP	NEK9	ENST00000238616	human	ensembl	74_37	-1	known	missense	c.2254	p.G752R	1.000	NULL	pfam_Prot_kinase_dom,pfam_Reg_chr_condens,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_RCC1/BLIP-II,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Reg_chr_condens,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK9	HGNC	ENSG00000119638				59	0	0	37	10	21.2766
NRXN3	0	genome.wustl.edu	37	14	79433671	79433671	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	79433671	79433671	T	C	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	silent	c.2865	p.T955	0.961	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				62	0	0	29	21	42
NRXN3	0	genome.wustl.edu	37	14	79434665	79434665	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	79434665	79434665	G	A	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.3085	p.G1029R	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				83	0	0	51	26	33.7662
NRXN3	0	genome.wustl.edu	37	14	80319917	80319917	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	80319917	80319917	G	A	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.4105	p.A1369T	1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				151	1	0.657895	106	68	39.0805
TDP1	0	genome.wustl.edu	37	14	90485721	90485721	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	90485721	90485721	C	T	SNP	TDP1	ENST00000335725	human	ensembl	74_37	+1	known	missense	c.1603	p.R535C	1.000	pfam_Tyr-DNA_phospho	pfam_Tyr-DNA_phospho	-	no_errors	TDP1	HGNC	ENSG00000042088				65	0	0	26	17	39.5349
CCDC88C	0	genome.wustl.edu	37	14	91739837	91739837	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	91739837	91739837	G	A	SNP	CCDC88C	ENST00000389857	human	ensembl	74_37	-1	known	missense	c.5219	p.S1740L	0.003	NULL	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_Fum_Rdtase/Succ_DH_flav-like_C	-	no_errors	CCDC88C	HGNC	ENSG00000015133				38	0	0	32	3	8.57143
TC2N	0	genome.wustl.edu	37	14	92266680	92266680	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	92266680	92266680	G	T	SNP	TC2N	ENST00000340892	human	ensembl	74_37	-1	known	missense	c.506	p.P169H	0.996	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	TC2N	HGNC	ENSG00000165929				50	0	0	28	8	22.2222
OTUB2	0	genome.wustl.edu	37	14	94510329	94510329	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	94510329	94510329	C	T	SNP	OTUB2	ENST00000203664	human	ensembl	74_37	+1	known	silent	c.231	p.R77	0.895	pfam_Peptidase_C65_otubain,pirsf_Ubiquitin_thioesterase_Otubain,pfscan_OTU	pfam_Peptidase_C65_otubain,pirsf_Ubiquitin_thioesterase_Otubain,pfscan_OTU	-	no_errors	OTUB2	HGNC	ENSG00000089723				272	0	0	136	66	32.6733
SERPINA13P	0	genome.wustl.edu	37	14	95109963	95109963	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	95109963	95109963	C	T	SNP	SERPINA13P	ENST00000469935	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	SERPINA13P	HGNC	ENSG00000187483				63	0	0	46	20	30.303
BCL11B	0	genome.wustl.edu	37	14	99642456	99642456	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	99642456	99642456	G	A	SNP	BCL11B	ENST00000357195	human	ensembl	74_37	-1	known	silent	c.717	p.H239	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11B	HGNC	ENSG00000127152				33	0	0	31	8	20.5128
CHEK2P2	0	genome.wustl.edu	37	15	20488875	20488875	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	20488875	20488875	G	A	SNP	CHEK2P2	ENST00000555186	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CHEK2P2	HGNC	ENSG00000259156				155	0	0	125	20	13.7931
HERC2P3	0	genome.wustl.edu	37	15	20644760	20644760	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	20644760	20644760	C	A	SNP	HERC2P3	ENST00000426501	human	ensembl	74_37	-1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229				15	0	0	11	4	26.6667
NIPA2	0	genome.wustl.edu	37	15	23006790	23006790	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	23006790	23006790	G	A	SNP	NIPA2	ENST00000337451	human	ensembl	74_37	-1	known	missense	c.514	p.R172C	1.000	pfam_Mg_trans_NIPA	pfam_Mg_trans_NIPA,pfam_DMT	-	no_errors	NIPA2	HGNC	ENSG00000140157				80	0	0	45	24	34.7826
SNHG14	0	genome.wustl.edu	37	15	25490537	25490537	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	25490537	25490537	C	T	SNP	SNHG14	ENST00000453082	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				76	0	0	66	35	34.6535
HERC2	0	genome.wustl.edu	37	15	28369270	28369270	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	28369270	28369270	G	A	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	silent	c.13101	p.F4367	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				96	0	0	68	24	26.087
HERC2	0	genome.wustl.edu	37	15	28478342	28478342	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	28478342	28478342	C	T	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	missense	c.4625	p.R1542H	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				107	0	0	42	7	14.2857
TRPM1	0	genome.wustl.edu	37	15	31323347	31323347	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	31323347	31323347	A	G	SNP	TRPM1	ENST00000542188	human	ensembl	74_37	-1	known	missense	c.3017	p.L1006P	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	TRPM1	HGNC	ENSG00000134160				70	0	0	65	26	28.5714
RYR3	0	genome.wustl.edu	37	15	33876610	33876610	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	33876610	33876610	G	A	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.1588	p.G530R	1.000	pfam_Ca-rel_channel	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				19	0	0	22	6	21.4286
NUTM1	0	genome.wustl.edu	37	15	34645957	34645957	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	34645957	34645957	A	G	SNP	NUTM1	ENST00000333756	human	ensembl	74_37	+1	known	missense	c.875	p.E292G	1.000	NULL	NULL	-	no_errors	NUTM1	HGNC	ENSG00000184507				103	0	0	52	27	34.1772
CSNK1A1P1	0	genome.wustl.edu	37	15	37110223	37110223	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	37110223	37110223	G	A	SNP	CSNK1A1P1	ENST00000430593	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	CSNK1A1P1	HGNC	ENSG00000223518				48	0	0	50	14	21.875
GPR176	0	genome.wustl.edu	37	15	40094180	40094180	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	40094180	40094180	G	A	SNP	GPR176	ENST00000561100	human	ensembl	74_37	-1	known	missense	c.701	p.A234V	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR176	HGNC	ENSG00000166073				116	0	0	80	36	31.0345
MGA	0	genome.wustl.edu	37	15	42005391	42005391	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	42005391	42005391	C	T	SNP	MGA	ENST00000219905	human	ensembl	74_37	+1	known	nonsense	c.3127	p.R1043*	1.000	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				107	0	0	57	38	40
MGA	0	genome.wustl.edu	37	15	42041948	42041948	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	42041948	42041948	C	T	SNP	MGA	ENST00000219905	human	ensembl	74_37	+1	known	missense	c.6143	p.S2048F	0.450	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				155	0	0	115	44	27.673
SPTBN5	0	genome.wustl.edu	37	15	42168400	42168400	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	42168400	42168400	C	T	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	missense	c.4034	p.R1345H	0.022	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877				59	0	0	19	14	42.4242
SEMA6D	0	genome.wustl.edu	37	15	48063749	48063749	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	48063749	48063749	C	T	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	missense	c.2989	p.R997C	1.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872				172	0	0	100	53	34.6405
FBN1	0	genome.wustl.edu	37	15	48888508	48888508	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	48888508	48888508	G	A	SNP	FBN1	ENST00000316623	human	ensembl	74_37	-1	known	silent	c.510	p.Y170	0.991	smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN1	HGNC	ENSG00000166147				104	0	0	49	26	34.6667
SLC27A2	0	genome.wustl.edu	37	15	50515313	50515313	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	50515313	50515313	C	T	SNP	SLC27A2	ENST00000267842	human	ensembl	74_37	+1	known	missense	c.1124	p.A375V	0.472	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A2	HGNC	ENSG00000140284				77	0	0	41	9	18
USP8	0	genome.wustl.edu	37	15	50782631	50782631	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	50782631	50782631	C	T	SNP	USP8	ENST00000307179	human	ensembl	74_37	+1	known	missense	c.2143	p.R715C	1.000	NULL	pfam_Peptidase_C19/C67,pfam_USP8_dimer,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,superfamily_WW_dom,pfscan_Rhodanese-like_dom,pfscan_Peptidase_C19/C67	-	no_errors	USP8	HGNC	ENSG00000138592				148	0	0	98	56	36.3636
AP4E1	0	genome.wustl.edu	37	15	51291352	51291352	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	51291352	51291352	A	C	SNP	AP4E1	ENST00000261842	human	ensembl	74_37	+1	known	missense	c.2988	p.K996N	0.996	pfam_Coatomer_bsu_C,pirsf_AP4_complex_esu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Coatomer_bsu_C,superfamily_ARM-type_fold,pirsf_AP4_complex_esu	-	no_errors	AP4E1	HGNC	ENSG00000081014				54	0	0	18	15	45.4545
TMOD2	0	genome.wustl.edu	37	15	52058642	52058642	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	52058642	52058642	G	A	SNP	TMOD2	ENST00000249700	human	ensembl	74_37	+1	known	missense	c.4	p.A2T	1.000	pfam_Tropomodulin	pfam_Tropomodulin	-	no_errors	TMOD2	HGNC	ENSG00000128872				60	0	0	42	4	8.69565
GNB5	0	genome.wustl.edu	37	15	52416738	52416738	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	52416738	52416738	C	T	SNP	GNB5	ENST00000261837	human	ensembl	74_37	-1	known	missense	c.1108	p.V370I	0.990	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Guanine_nucleotide-bd_bsu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Guanine_nucleotide-bd_bsu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Gprotein_B,prints_G-protein_beta_WD-40_rep	-	no_errors	GNB5	HGNC	ENSG00000069966				98	0	0	69	49	41.5254
VPS13C	0	genome.wustl.edu	37	15	62182509	62182509	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	62182509	62182509	C	T	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	missense	c.9196	p.D3066N	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003				78	0	0	34	14	29.1667
RAB8B	0	genome.wustl.edu	37	15	63551829	63551829	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	63551829	63551829	G	A	SNP	RAB8B	ENST00000321437	human	ensembl	74_37	+1	known	missense	c.418	p.A140T	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB8B	HGNC	ENSG00000166128				46	0	0	23	15	39.4737
RBPMS2	0	genome.wustl.edu	37	15	65041646	65041646	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	65041646	65041646	G	A	SNP	RBPMS2	ENST00000300069	human	ensembl	74_37	-1	known	missense	c.251	p.A84V	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBPMS2	HGNC	ENSG00000166831				127	0	0	98	41	29.4964
CILP	0	genome.wustl.edu	37	15	65490415	65490415	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	65490415	65490415	G	A	SNP	CILP	ENST00000261883	human	ensembl	74_37	-1	known	missense	c.2209	p.R737C	0.999	NULL	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP	HGNC	ENSG00000138615				203	0	0	130	57	30.4813
SKOR1	0	genome.wustl.edu	37	15	68120209	68120209	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	68120209	68120209	C	T	SNP	SKOR1	ENST00000380035	human	ensembl	74_37	+1	known	silent	c.2043	p.S681	0.000	NULL	pfam_Transform_Ski,pfam_c-SKI_SMAD4-bd_dom,superfamily_DNA-bd_dom_put,superfamily_SAND_dom-like	-	no_errors	SKOR1	HGNC	ENSG00000188779				14	0	0	10	12	54.5455
UACA	0	genome.wustl.edu	37	15	70959701	70959701	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	70959701	70959701	G	A	SNP	UACA	ENST00000322954	human	ensembl	74_37	-1	known	nonsense	c.3322	p.Q1108*	0.998	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Prefoldin,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_T_SNARE_dom,prints_Ankyrin_rpt	-	no_errors	UACA	HGNC	ENSG00000137831				110	0	0	51	20	28.169
THSD4	0	genome.wustl.edu	37	15	72023519	72023519	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	72023519	72023519	C	T	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	silent	c.1593	p.N531	0.849	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720				68	0	0	57	27	32.1429
THSD4	0	genome.wustl.edu	37	15	72030245	72030245	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	72030245	72030245	C	T	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	missense	c.1805	p.P602L	0.903	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720				107	0	0	65	33	33.6735
NPTN	0	genome.wustl.edu	37	15	73889561	73889561	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	73889561	73889561	C	A	SNP	NPTN	ENST00000345330	human	ensembl	74_37	-1	known	missense	c.241	p.G81C	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_MFS_dom_general_subst_transpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NPTN	HGNC	ENSG00000156642				72	0	0	69	29	29.5918
ARID3B	0	genome.wustl.edu	37	15	74883971	74883971	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	74883971	74883971	G	T	SNP	ARID3B	ENST00000346246	human	ensembl	74_37	+1	known	missense	c.1236	p.Q412H	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3B	HGNC	ENSG00000179361				11	0	0	12	6	33.3333
CSK	0	genome.wustl.edu	37	15	75093411	75093411	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	75093411	75093411	G	A	SNP	CSK	ENST00000220003	human	ensembl	74_37	+1	known	missense	c.781	p.G261R	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	CSK	HGNC	ENSG00000103653				186	0	0	116	33	22.1477
ADAMTS7	0	genome.wustl.edu	37	15	79092648	79092648	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	79092648	79092648	G	A	SNP	ADAMTS7	ENST00000388820	human	ensembl	74_37	-1	known	silent	c.342	p.G114	0.118	pfam_Peptidase_M12B_N	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS7	HGNC	ENSG00000136378				22	0	0	20	11	35.4839
KIAA1024	0	genome.wustl.edu	37	15	79750690	79750690	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	79750690	79750690	G	A	SNP	KIAA1024	ENST00000305428	human	ensembl	74_37	+1	known	missense	c.2201	p.R734H	1.000	NULL	pfam_UPF0258	-	no_errors	KIAA1024	HGNC	ENSG00000169330				110	0	0	62	44	41.5094
MEX3B	0	genome.wustl.edu	37	15	82335714	82335714	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	82335714	82335714	G	T	SNP	MEX3B	ENST00000329713	human	ensembl	74_37	-1	known	silent	c.1497	p.S499	0.984	NULL	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3B	HGNC	ENSG00000183496				31	0	0	24	10	29.4118
ABHD2	0	genome.wustl.edu	37	15	89698699	89698699	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	89698699	89698699	G	A	SNP	ABHD2	ENST00000352732	human	ensembl	74_37	+1	known	missense	c.472	p.A158T	1.000	pirsf_AB-Hydro_YheT	pfam_AB_hydrolase_1,pirsf_AB-Hydro_YheT	-	no_errors	ABHD2	HGNC	ENSG00000140526				135	0	0	94	43	31.3869
FANCI	0	genome.wustl.edu	37	15	89801983	89801983	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	89801983	89801983	G	A	SNP	FANCI	ENST00000310775	human	ensembl	74_37	+1	known	missense	c.133	p.A45T	0.816	NULL	NULL	-	no_errors	FANCI	HGNC	ENSG00000140525				131	0	0	80	47	37.0079
ENSG00000270017	0	genome.wustl.edu	37	15	95398851	95398851	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	95398851	95398851	G	A	SNP	ENSG00000270017	ENST00000602330	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.254	-	-	-	no_errors	CTD-2576F9.2	Clone_based_vega_gene	ENSG00000270017				28	0	0	22	11	33.3333
IGF1R	0	genome.wustl.edu	37	15	99482585	99482585	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	99482585	99482585	C	T	SNP	IGF1R	ENST00000268035	human	ensembl	74_37	+1	known	silent	c.3453	p.I1151	0.090	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443				152	0	0	105	47	30.9211
TEKT5	0	genome.wustl.edu	37	16	10721460	10721460	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	10721460	10721460	G	A	SNP	TEKT5	ENST00000283025	human	ensembl	74_37	-1	known	missense	c.1438	p.R480C	0.994	NULL	pfam_Tektin,prints_Tektin	-	no_errors	TEKT5	HGNC	ENSG00000153060				101	0	0	43	33	43.4211
C1QTNF8	0	genome.wustl.edu	37	16	1143669	1143669	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	1143669	1143669	G	A	SNP	C1QTNF8	ENST00000328449	human	ensembl	74_37	-1	known	silent	c.591	p.S197	0.994	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF8	HGNC	ENSG00000184471				32	0	0	34	11	24.4444
CLCN7	0	genome.wustl.edu	37	16	1500643	1500643	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	1500643	1500643	C	T	SNP	CLCN7	ENST00000382745	human	ensembl	74_37	-1	known	missense	c.1472	p.G491D	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-7	-	no_errors	CLCN7	HGNC	ENSG00000103249				38	0	0	19	5	20.8333
PDXDC1	0	genome.wustl.edu	37	16	15122809	15122809	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	15122809	15122809	G	A	SNP	PDXDC1	ENST00000396410	human	ensembl	74_37	+1	known	missense	c.1279	p.A427T	0.092	superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	PDXDC1	HGNC	ENSG00000179889				41	0	0	25	13	34.2105
CRAMP1L	0	genome.wustl.edu	37	16	1710001	1710001	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	1710001	1710001	C	T	SNP	CRAMP1L	ENST00000293925	human	ensembl	74_37	+1	known	missense	c.2350	p.R784W	0.994	NULL	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	CRAMP1L	HGNC	ENSG00000007545				28	0	0	20	14	41.1765
ABCC6P1	0	genome.wustl.edu	37	16	18593772	18593772	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	18593772	18593772	G	A	SNP	ABCC6P1	ENST00000546162	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.984	-	-	-	no_errors	ABCC6P1	HGNC	ENSG00000256340				20	0	0	10	8	44.4444
RPL3L	0	genome.wustl.edu	37	16	2004022	2004022	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	2004022	2004022	G	A	SNP	RPL3L	ENST00000268661	human	ensembl	74_37	-1	known	missense	c.131	p.T44M	1.000	superfamily_Transl_B-barrel	pfam_Ribosomal_L3,superfamily_Transl_B-barrel	-	no_errors	RPL3L	HGNC	ENSG00000140986				32	0	0	22	4	15.3846
GP2	0	genome.wustl.edu	37	16	20335195	20335195	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	20335195	20335195	C	T	SNP	GP2	ENST00000381362	human	ensembl	74_37	-1	known	missense	c.478	p.G160R	0.000	NULL	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	GP2	HGNC	ENSG00000169347				48	0	0	22	17	43.5897
ACSM5	0	genome.wustl.edu	37	16	20448595	20448595	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	20448595	20448595	G	A	SNP	ACSM5	ENST00000331849	human	ensembl	74_37	+1	known	missense	c.1442	p.R481Q	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM5	HGNC	ENSG00000183549				109	0	0	54	14	20.5882
DNAH3	0	genome.wustl.edu	37	16	21053366	21053366	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	21053366	21053366	G	A	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	silent	c.4621	p.L1541	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486				92	0	0	46	30	39.4737
CRYM-AS1	0	genome.wustl.edu	37	16	21327263	21327263	+	RNA	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	21327263	21327263	T	C	SNP	CRYM-AS1	ENST00000338573	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	CRYM-AS1	HGNC	ENSG00000189149				52	0	0	33	10	23.2558
PKD1	0	genome.wustl.edu	37	16	2142541	2142541	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	2142541	2142541	C	A	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.11209	p.G3737W	0.774	pfam_PKD1_2_channel	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710				35	0	0	19	9	32.1429
PKD1	0	genome.wustl.edu	37	16	2153317	2153317	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	2153317	2153317	C	T	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.8741	p.S2914N	0.997	NULL	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710				111	0	0	41	24	36.9231
ERN2	0	genome.wustl.edu	37	16	23703620	23703620	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	23703620	23703620	G	A	SNP	ERN2	ENST00000256797	human	ensembl	74_37	-1	known	silent	c.2277	p.C759	0.750	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_KEN_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_PQQ_beta_propeller_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PUG-dom,pfscan_Prot_kinase_dom	-	no_errors	ERN2	HGNC	ENSG00000134398				94	0	0	73	43	37.069
C16orf82	0	genome.wustl.edu	37	16	27078694	27078694	+	RNA	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	27078694	27078694	G	T	SNP	C16orf82	ENST00000418886	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C16orf82	HGNC	ENSG00000234186				12	0	0	13	9	40.9091
PRSS27	0	genome.wustl.edu	37	16	2763683	2763683	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	2763683	2763683	C	T	SNP	PRSS27	ENST00000302641	human	ensembl	74_37	-1	known	silent	c.525	p.P175	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS27	HGNC	ENSG00000172382				42	0	0	38	13	25.4902
SBK1	0	genome.wustl.edu	37	16	28328881	28328881	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	28328881	28328881	C	T	SNP	SBK1	ENST00000341901	human	ensembl	74_37	+1	known	missense	c.169	p.R57W	0.996	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_Sbk1,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_Sbk1,pfscan_Prot_kinase_dom	-	no_errors	SBK1	HGNC	ENSG00000188322				88	0	0	47	34	41.9753
SBK1	0	genome.wustl.edu	37	16	28331811	28331811	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	28331811	28331811	C	T	SNP	SBK1	ENST00000341901	human	ensembl	74_37	+1	known	missense	c.844	p.R282C	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_Sbk1,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_Sbk1,pfscan_Prot_kinase_dom	-	no_errors	SBK1	HGNC	ENSG00000188322				25	0	0	20	13	39.3939
ATP2A1	0	genome.wustl.edu	37	16	28898806	28898806	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	28898806	28898806	G	A	SNP	ATP2A1	ENST00000357084	human	ensembl	74_37	+1	known	missense	c.691	p.E231K	0.996	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A1	HGNC	ENSG00000196296				134	0	0	129	9	6.52174
ZNF768	0	genome.wustl.edu	37	16	30535842	30535842	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	30535842	30535842	C	T	SNP	ZNF768	ENST00000380412	human	ensembl	74_37	-1	known	missense	c.1619	p.R540H	0.973	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_RNA_pol_II_repeat_euk,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF768	HGNC	ENSG00000169957				64	0	0	51	21	29.1667
ZNF764	0	genome.wustl.edu	37	16	30566768	30566768	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	30566768	30566768	C	T	SNP	ZNF764	ENST00000252797	human	ensembl	74_37	-1	known	missense	c.974	p.R325H	0.943	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF764	HGNC	ENSG00000169951				20	0	0	24	11	31.4286
SRCAP	0	genome.wustl.edu	37	16	30732093	30732093	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	30732093	30732093	G	A	SNP	SRCAP	ENST00000262518	human	ensembl	74_37	+1	known	missense	c.3047	p.R1016Q	1.000	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603				162	0	0	106	59	35.7576
STX4	0	genome.wustl.edu	37	16	31050934	31050934	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	31050934	31050934	G	A	SNP	STX4	ENST00000313843	human	ensembl	74_37	+1	known	missense	c.775	p.V259I	0.992	pfam_T_SNARE_dom,smart_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_Syntaxin_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX4	HGNC	ENSG00000103496				131	1	0.757576	116	45	27.9503
PRSS8	0	genome.wustl.edu	37	16	31143904	31143904	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	31143904	31143904	G	A	SNP	PRSS8	ENST00000317508	human	ensembl	74_37	-1	known	missense	c.551	p.T184M	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS8	HGNC	ENSG00000052344				66	0	0	43	23	34.8485
PRSS8	0	genome.wustl.edu	37	16	31144063	31144063	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	31144063	31144063	C	T	SNP	PRSS8	ENST00000317508	human	ensembl	74_37	-1	known	missense	c.478	p.A160T	0.917	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS8	HGNC	ENSG00000052344				138	0	0	161	20	11.0497
FUS	0	genome.wustl.edu	37	16	31196423	31196423	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	31196423	31196423	T	C	SNP	FUS	ENST00000254108	human	ensembl	74_37	+1	known	silent	c.687	p.G229	0.286	NULL	pfam_Znf_RanBP2,pfam_RRM_dom,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	FUS	HGNC	ENSG00000089280				15	0	0	16	9	36
ZNF205	0	genome.wustl.edu	37	16	3170056	3170056	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	3170056	3170056	G	A	SNP	ZNF205	ENST00000219091	human	ensembl	74_37	+1	known	silent	c.1395	p.A465	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF205	HGNC	ENSG00000122386				107	1	0.925926	123	32	20.6452
PPL	0	genome.wustl.edu	37	16	4949045	4949045	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	4949045	4949045	G	A	SNP	PPL	ENST00000345988	human	ensembl	74_37	-1	known	missense	c.845	p.A282V	0.330	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC	ENSG00000118898				153	0	0	75	44	36.9748
SEC14L5	0	genome.wustl.edu	37	16	5046950	5046950	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	5046950	5046950	G	A	SNP	SEC14L5	ENST00000251170	human	ensembl	74_37	+1	known	missense	c.875	p.R292H	1.000	superfamily_CRAL/TRIO_N_dom	pfam_PRELI/MSF1,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,superfamily_GOLD,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,pfscan_PRELI/MSF1,prints_CRAL-bd_toc_tran	-	no_errors	SEC14L5	HGNC	ENSG00000103184				29	0	0	22	18	45
IRX3	0	genome.wustl.edu	37	16	54319007	54319007	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	54319007	54319007	C	T	SNP	IRX3	ENST00000329734	human	ensembl	74_37	-1	known	silent	c.786	p.A262	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX3	HGNC	ENSG00000177508				35	0	0	25	2	7.40741
CES5A	0	genome.wustl.edu	37	16	55905570	55905570	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	55905570	55905570	C	T	SNP	CES5A	ENST00000521992	human	ensembl	74_37	-1	known	silent	c.471	p.A157	0.021	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES5A	HGNC	ENSG00000159398				48	0	0	33	19	36.5385
CNGB1	0	genome.wustl.edu	37	16	57949226	57949226	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	57949226	57949226	C	A	SNP	CNGB1	ENST00000251102	human	ensembl	74_37	-1	known	missense	c.2231	p.S744I	0.998	NULL	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGB1	HGNC	ENSG00000070729				37	0	0	39	6	13.3333
CDH5	0	genome.wustl.edu	37	16	66424419	66424419	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	66424419	66424419	C	T	SNP	CDH5	ENST00000341529	human	ensembl	74_37	+1	known	missense	c.895	p.R299W	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH5	HGNC	ENSG00000179776				104	0	0	42	22	34.375
CDH5	0	genome.wustl.edu	37	16	66436801	66436801	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	66436801	66436801	C	T	SNP	CDH5	ENST00000341529	human	ensembl	74_37	+1	known	missense	c.2084	p.A695V	0.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH5	HGNC	ENSG00000179776				32	0	0	22	9	29.0323
C16orf70	0	genome.wustl.edu	37	16	67178213	67178213	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	67178213	67178213	C	T	SNP	C16orf70	ENST00000219139	human	ensembl	74_37	+1	known	missense	c.896	p.A299V	1.000	pfam_UPF0183	pfam_UPF0183	-	no_errors	C16orf70	HGNC	ENSG00000125149				59	0	0	38	12	24
GFOD2	0	genome.wustl.edu	37	16	67709441	67709441	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	67709441	67709441	G	A	SNP	GFOD2	ENST00000268797	human	ensembl	74_37	-1	known	missense	c.775	p.R259C	0.993	NULL	pfam_Oxidoreductase_N	-	no_errors	GFOD2	HGNC	ENSG00000141098				66	0	0	39	30	43.4783
SLC12A4	0	genome.wustl.edu	37	16	67982038	67982038	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	67982038	67982038	G	A	SNP	SLC12A4	ENST00000422611	human	ensembl	74_37	-1	known	silent	c.1779	p.F593	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,prints_K/Cl_cotranspt1,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A4	HGNC	ENSG00000124067				133	0	0	70	41	36.9369
SLC7A6	0	genome.wustl.edu	37	16	68330568	68330568	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	68330568	68330568	C	T	SNP	SLC7A6	ENST00000219343	human	ensembl	74_37	+1	known	silent	c.1308	p.S436	0.967	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A6	HGNC	ENSG00000103064				232	0	0	172	24	12.2449
VPS4A	0	genome.wustl.edu	37	16	69353359	69353359	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	69353359	69353359	A	C	SNP	VPS4A	ENST00000254950	human	ensembl	74_37	+1	known	missense	c.533	p.K178T	1.000	pfam_ATPase_AAA_core,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_MIT,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_MIT,smart_AAA+_ATPase	-	no_errors	VPS4A	HGNC	ENSG00000132612				57	0	0	53	18	25.3521
WDR90	0	genome.wustl.edu	37	16	712018	712018	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	712018	712018	G	A	SNP	WDR90	ENST00000549091	human	ensembl	74_37	+1	novel	missense	c.3992	p.G1331D	0.051	superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_DUF667,pfam_Nucleoporin_Nup160,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR90	HGNC	ENSG00000161996				63	0	0	66	15	18.5185
DHX38	0	genome.wustl.edu	37	16	72132685	72132685	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	72132685	72132685	G	A	SNP	DHX38	ENST00000268482	human	ensembl	74_37	+1	known	missense	c.758	p.R253Q	0.996	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX38	HGNC	ENSG00000140829				52	0	0	29	18	38.2979
RBFOX1	0	genome.wustl.edu	37	16	7383075	7383075	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	7383075	7383075	C	T	SNP	RBFOX1	ENST00000311745	human	ensembl	74_37	+1	known	missense	c.73	p.P25S	0.998	pirsf_RNA-bd_Fox-1	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX1	HGNC	ENSG00000078328				127	0	0	67	25	27.1739
WDR59	0	genome.wustl.edu	37	16	74943405	74943405	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	74943405	74943405	C	A	SNP	WDR59	ENST00000262144	human	ensembl	74_37	-1	known	nonsense	c.1636	p.G546*	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_UBQ-conjugating_enzyme/RWD,smart_WD40_repeat,smart_RWD-domain,pfscan_RWD-domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR59	HGNC	ENSG00000103091				95	0	0	47	48	50.5263
CNTNAP4	0	genome.wustl.edu	37	16	76555095	76555095	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	76555095	76555095	C	A	SNP	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	silent	c.2421	p.T807	0.184	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910				203	0	0	99	49	33.1081
HSDL1	0	genome.wustl.edu	37	16	84163781	84163781	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	84163781	84163781	G	A	SNP	HSDL1	ENST00000219439	human	ensembl	74_37	-1	known	missense	c.476	p.P159L	0.991	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSDL1	HGNC	ENSG00000103160				160	1	0.621118	112	61	35.2601
COX4I1	0	genome.wustl.edu	37	16	85839428	85839428	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	85839428	85839428	A	G	SNP	COX4I1	ENST00000253452	human	ensembl	74_37	+1	known	missense	c.331	p.I111V	0.930	pfam_Cyt_c_oxidase_su4_fam,superfamily_Cyt_c_oxidase_su4_fam	pfam_Cyt_c_oxidase_su4_fam,superfamily_Cyt_c_oxidase_su4_fam,prints_Cyt_c_oxidase_su4	-	no_errors	COX4I1	HGNC	ENSG00000131143				138	0	0	79	43	35.2459
FOXC2	0	genome.wustl.edu	37	16	86601223	86601223	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	86601223	86601223	C	T	SNP	FOXC2	ENST00000320354	human	ensembl	74_37	+1	known	silent	c.282	p.T94	0.918	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXC2	HGNC	ENSG00000176692				135	0	0	132	49	27.0718
FOXC2	0	genome.wustl.edu	37	16	86602288	86602288	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	86602288	86602288	C	T	SNP	FOXC2	ENST00000320354	human	ensembl	74_37	+1	known	silent	c.1347	p.N449	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXC2	HGNC	ENSG00000176692				72	0	0	57	35	38.0435
METTL22	0	genome.wustl.edu	37	16	8722946	8722946	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	8722946	8722946	C	A	SNP	METTL22	ENST00000381920	human	ensembl	74_37	+1	known	missense	c.493	p.P165T	0.000	NULL	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	METTL22	HGNC	ENSG00000067365				424	0	0	275	140	33.7349
JPH3	0	genome.wustl.edu	37	16	87636634	87636634	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	87636634	87636634	C	T	SNP	JPH3	ENST00000301008	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	JPH3	HGNC	ENSG00000154118				22	0	0	17	4	19.0476
BANP	0	genome.wustl.edu	37	16	88066741	88066741	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	88066741	88066741	G	A	SNP	BANP	ENST00000286122	human	ensembl	74_37	+1	known	missense	c.1066	p.A356T	0.000	NULL	pfam_BEN_domain	-	no_errors	BANP	HGNC	ENSG00000172530				45	0	0	22	14	38.8889
ANKRD11	0	genome.wustl.edu	37	16	89348416	89348416	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	89348416	89348416	G	A	SNP	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	missense	c.4534	p.R1512C	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522				96	0	0	53	39	42.3913
TUBB3	0	genome.wustl.edu	37	16	90001326	90001326	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	90001326	90001326	G	A	SNP	TUBB3	ENST00000315491	human	ensembl	74_37	+1	known	missense	c.467	p.R156H	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB3	Uniprot_gn	ENSG00000258947				119	0	0	77	44	36.3636
GRIN2A	0	genome.wustl.edu	37	16	9857479	9857479	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	9857479	9857479	A	G	SNP	GRIN2A	ENST00000330684	human	ensembl	74_37	-1	known	missense	c.3922	p.S1308P	0.999	pfam_NMDAR2_C	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454				170	0	0	97	26	21.1382
MYH4	0	genome.wustl.edu	37	17	10348604	10348604	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	10348604	10348604	C	T	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.5245	p.V1749I	0.742	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424				173	0	0	74	46	38.3333
MYH4	0	genome.wustl.edu	37	17	10355524	10355524	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	10355524	10355524	C	T	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.3472	p.G1158S	0.999	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424				209	0	0	123	74	37.5635
MYH1	0	genome.wustl.edu	37	17	10404768	10404768	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	10404768	10404768	G	A	SNP	MYH1	ENST00000226207	human	ensembl	74_37	-1	known	missense	c.3397	p.R1133W	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC	ENSG00000109061				80	0	0	68	41	37.6147
SLC43A2	0	genome.wustl.edu	37	17	1518295	1518295	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	1518295	1518295	C	T	SNP	SLC43A2	ENST00000571376	human	ensembl	74_37	-1	known	missense	c.316	p.V106I	0.443	NULL	NULL	-	no_errors	SLC43A2	HGNC	ENSG00000167703				60	0	0	45	12	21.0526
RILP	0	genome.wustl.edu	37	17	1552944	1552944	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	1552944	1552944	G	A	SNP	RILP	ENST00000301336	human	ensembl	74_37	-1	known	missense	c.155	p.A52V	0.125	pfam_JNK/Rab-associated_protein-1_N	pfam_RILP,pfam_JNK/Rab-associated_protein-1_N	-	no_errors	RILP	HGNC	ENSG00000167705				15	0	0	17	12	41.3793
FLCN	0	genome.wustl.edu	37	17	17129580	17129580	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	17129580	17129580	G	T	SNP	FLCN	ENST00000285071	human	ensembl	74_37	-1	known	silent	c.306	p.T102	0.524	NULL	pfam_Folliculin	-	no_errors	FLCN	HGNC	ENSG00000154803				140	0	0	72	29	28.7129
MED9	0	genome.wustl.edu	37	17	17394785	17394785	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	17394785	17394785	C	T	SNP	MED9	ENST00000268711	human	ensembl	74_37	+1	known	silent	c.417	p.C139	1.000	pfam_Mediator_Med9	pfam_Mediator_Med9	-	no_errors	MED9	HGNC	ENSG00000141026				91	0	0	73	32	30.4762
RAI1	0	genome.wustl.edu	37	17	17699712	17699712	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	17699712	17699712	C	A	SNP	RAI1	ENST00000353383	human	ensembl	74_37	+1	known	silent	c.3450	p.T1150	0.269	NULL	smart_Znf_PHD	-	no_errors	RAI1	HGNC	ENSG00000108557				86	0	0	80	34	29.8246
RAI1	0	genome.wustl.edu	37	17	17700691	17700691	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	17700691	17700691	C	T	SNP	RAI1	ENST00000353383	human	ensembl	74_37	+1	known	missense	c.4429	p.P1477S	0.158	NULL	smart_Znf_PHD	-	no_errors	RAI1	HGNC	ENSG00000108557				38	0	0	24	17	41.4634
MYO15A	0	genome.wustl.edu	37	17	18070920	18070920	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	18070920	18070920	T	C	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.9965	p.L3322P	1.000	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				49	0	0	45	20	30.7692
SNORD3A	0	genome.wustl.edu	37	17	19091383	19091383	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	19091383	19091383	G	A	SNP	SNORD3A	ENST00000365494	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	SNORD3A	HGNC	ENSG00000263934				289	0	0	290	22	7.05128
LGALS9B	0	genome.wustl.edu	37	17	20354896	20354896	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	20354896	20354896	A	G	SNP	LGALS9B	ENST00000423676	human	ensembl	74_37	-1	known	silent	c.822	p.D274	0.225	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS9B	HGNC	ENSG00000170298				97	0	0	64	34	34.6939
LGALS9B	0	genome.wustl.edu	37	17	20361677	20361677	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	20361677	20361677	G	A	SNP	LGALS9B	ENST00000423676	human	ensembl	74_37	-1	known	missense	c.152	p.T51M	0.011	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS9B	HGNC	ENSG00000170298				58	0	0	45	10	18.1818
TMEM11	0	genome.wustl.edu	37	17	21101601	21101601	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	21101601	21101601	C	T	SNP	TMEM11	ENST00000577419	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.063	-	-	-	no_errors	TMEM11	HGNC	ENSG00000178307				106	0	0	80	28	25.9259
SGSM2	0	genome.wustl.edu	37	17	2275734	2275734	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	2275734	2275734	C	T	SNP	SGSM2	ENST00000268989	human	ensembl	74_37	+1	known	silent	c.1740	p.S580	0.003	NULL	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM2	HGNC	ENSG00000141258				17	0	0	21	12	36.3636
ENSG00000205821	0	genome.wustl.edu	37	17	2318566	2318566	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	2318566	2318566	C	T	SNP	ENSG00000205821	ENST00000609667	human	ensembl	74_37	-1	known	missense	c.86	p.R29H	0.000	NULL	NULL	-	no_errors	AC006435.1	Clone_based_ensembl_gene	ENSG00000205821				199	0	0	145	92	38.8186
SPAG5	0	genome.wustl.edu	37	17	26906803	26906803	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	26906803	26906803	G	T	SNP	SPAG5	ENST00000321765	human	ensembl	74_37	-1	known	silent	c.2850	p.T950	1.000	NULL	NULL	-	no_errors	SPAG5	HGNC	ENSG00000076382				212	0	0	143	52	26.6667
PIPOX	0	genome.wustl.edu	37	17	27380010	27380010	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	27380010	27380010	G	A	SNP	PIPOX	ENST00000323372	human	ensembl	74_37	+1	known	silent	c.336	p.R112	0.986	pfam_FAD-dep_OxRdtase,tigrfam_SoxA_mon	pfam_FAD-dep_OxRdtase,tigrfam_SoxA_mon	-	no_errors	PIPOX	HGNC	ENSG00000179761				88	0	0	47	30	38.961
MYO18A	0	genome.wustl.edu	37	17	27419968	27419968	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	27419968	27419968	G	A	SNP	MYO18A	ENST00000354329	human	ensembl	74_37	-1	known	missense	c.4978	p.R1660C	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_PDZ,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_Regulat_G_prot_signal_superfam,smart_PDZ,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_PDZ,pfscan_RecA_monomer-monomer_interface,prints_Myosin_head_motor_dom	-	no_errors	MYO18A	HGNC	ENSG00000196535				83	0	0	60	6	9.09091
SLC6A4	0	genome.wustl.edu	37	17	28548905	28548905	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	28548905	28548905	G	A	SNP	SLC6A4	ENST00000261707	human	ensembl	74_37	-1	known	silent	c.72	p.N24	0.007	pfam_Na/ntran_symport_serotonin_N,prints_Na/ntran_symport_serotonin_N	pfam_Na/ntran_symport,pfam_Na/ntran_symport_serotonin_N,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_serotonin_N	-	no_errors	SLC6A4	HGNC	ENSG00000108576				124	0	0	79	53	40.1515
UNC45B	0	genome.wustl.edu	37	17	33482316	33482316	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	33482316	33482316	C	T	SNP	UNC45B	ENST00000268876	human	ensembl	74_37	+1	known	missense	c.641	p.A214V	1.000	superfamily_ARM-type_fold	pfam_UNC-45/Ring3,superfamily_ARM-type_fold,smart_TPR_repeat,smart_Armadillo,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	UNC45B	HGNC	ENSG00000141161				52	0	0	34	19	35.8491
ENSG00000266999	0	genome.wustl.edu	37	17	34235878	34235878	+	RNA	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	34235878	34235878	A	C	SNP	ENSG00000266999	ENST00000587132	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC015849.16	Clone_based_vega_gene	ENSG00000266999				60	0	0	48	24	33.3333
CCL4L1	0	genome.wustl.edu	37	17	34539187	34539187	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	34539187	34539187	A	T	SNP	CCL4L1	ENST00000589079	human	ensembl	74_37	+1	known	missense	c.86	p.D29V	1.000	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom	-	no_errors	CCL4L1	HGNC	ENSG00000205020				8	0	0	8	6	42.8571
TRPV1	0	genome.wustl.edu	37	17	3493653	3493653	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	3493653	3493653	C	T	SNP	TRPV1	ENST00000399756	human	ensembl	74_37	-1	known	missense	c.638	p.R213H	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	-	no_errors	TRPV1	HGNC	ENSG00000196689				77	0	0	56	34	37.7778
MLLT6	0	genome.wustl.edu	37	17	36873726	36873726	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	36873726	36873726	G	A	SNP	MLLT6	ENST00000325718	human	ensembl	74_37	+1	known	missense	c.1693	p.G565R	0.992	NULL	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MLLT6	HGNC	ENSG00000108292				146	0	0	131	65	33.1633
CDK12	0	genome.wustl.edu	37	17	37676314	37676314	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	37676314	37676314	C	T	SNP	CDK12	ENST00000447079	human	ensembl	74_37	+1	known	silent	c.3069	p.V1023	0.014	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK12	HGNC	ENSG00000167258				100	0	0	83	6	6.74157
ERBB2	0	genome.wustl.edu	37	17	37881332	37881332	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	37881332	37881332	G	A	SNP	ERBB2	ENST00000269571	human	ensembl	74_37	+1	known	missense	c.2524	p.V842I	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736				88	0	0	39	21	35
GSDMB	0	genome.wustl.edu	37	17	38066178	38066178	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	38066178	38066178	C	T	SNP	GSDMB	ENST00000360317	human	ensembl	74_37	-1	known	splice_site	c.408-1	e3-1	0.998	-	-	-	no_errors	GSDMB	HGNC	ENSG00000073605				79	0	0	45	14	23.7288
MED24	0	genome.wustl.edu	37	17	38185125	38185125	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	38185125	38185125	C	T	SNP	MED24	ENST00000394128	human	ensembl	74_37	-1	known	missense	c.1363	p.A455T	1.000	pfam_Mediator_Med24_N	pfam_Mediator_Med24_N	-	no_errors	MED24	HGNC	ENSG00000008838				89	0	0	67	27	28.7234
KRT28	0	genome.wustl.edu	37	17	38953394	38953394	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	38953394	38953394	G	A	SNP	KRT28	ENST00000306658	human	ensembl	74_37	-1	known	missense	c.830	p.A277V	0.503	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT28	HGNC	ENSG00000173908				67	0	0	44	29	39.726
COASY	0	genome.wustl.edu	37	17	40716142	40716142	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	40716142	40716142	C	T	SNP	COASY	ENST00000590958	human	ensembl	74_37	+1	known	silent	c.951	p.S317	1.000	pfam_Cyt_trans-like	pfam_Depp_CoAkinase,pfam_Cyt_trans-like,superfamily_P-loop_NTPase,tigrfam_Depp_CoAkinase	-	no_errors	COASY	HGNC	ENSG00000068120				46	0	0	28	17	37.7778
AOC2	0	genome.wustl.edu	37	17	41001256	41001256	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	41001256	41001256	G	A	SNP	AOC2	ENST00000253799	human	ensembl	74_37	+1	known	missense	c.1742	p.R581H	1.000	pfam_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_C	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N3,pfam_Cu_amine_oxidase_N2,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC2	HGNC	ENSG00000131480				148	1	0.671141	109	48	30.5732
ASB16	0	genome.wustl.edu	37	17	42254992	42254992	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	42254992	42254992	G	A	SNP	ASB16	ENST00000293414	human	ensembl	74_37	+1	known	missense	c.1078	p.A360T	1.000	NULL	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB16	HGNC	ENSG00000161664				108	0	0	76	16	17.3913
GPATCH8	0	genome.wustl.edu	37	17	42474962	42474962	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	42474962	42474962	G	A	SNP	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	nonsense	c.4483	p.Q1495*	1.000	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566				58	0	0	46	27	36.9863
GJC1	0	genome.wustl.edu	37	17	42882358	42882358	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	42882358	42882358	A	G	SNP	GJC1	ENST00000330514	human	ensembl	74_37	-1	known	silent	c.828	p.N276	0.989	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin45	-	no_errors	GJC1	HGNC	ENSG00000182963				187	0	0	113	66	36.8715
NMT1	0	genome.wustl.edu	37	17	43180414	43180414	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	43180414	43180414	G	A	SNP	NMT1	ENST00000258960	human	ensembl	74_37	+1	known	silent	c.1089	p.T363	0.941	pfam_MyristoylCoA_TrFase_C,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	pfam_MyristoylCoA_TrFase_C,pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	-	no_errors	NMT1	HGNC	ENSG00000136448				119	0	0	65	43	39.8148
FMNL1	0	genome.wustl.edu	37	17	43320666	43320666	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	43320666	43320666	G	A	SNP	FMNL1	ENST00000328118	human	ensembl	74_37	+1	known	missense	c.2192	p.R731H	0.985	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FMNL1	HGNC	ENSG00000184922				69	0	0	52	19	26.7606
MAP3K14	0	genome.wustl.edu	37	17	43345072	43345072	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	43345072	43345072	G	A	SNP	MAP3K14	ENST00000344686	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MAP3K14	HGNC	ENSG00000006062				167	0	0	125	53	29.7753
ARHGAP27	0	genome.wustl.edu	37	17	43507092	43507092	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	43507092	43507092	C	A	SNP	ARHGAP27	ENST00000428638	human	ensembl	74_37	-1	known	missense	c.554	p.G185V	1.000	NULL	pfam_RhoGAP_dom,pfam_WW_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP27	HGNC	ENSG00000159314				9	0	0	6	10	62.5
ZMYND15	0	genome.wustl.edu	37	17	4646746	4646746	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	4646746	4646746	C	T	SNP	ZMYND15	ENST00000433935	human	ensembl	74_37	+1	known	silent	c.1293	p.R431	0.980	NULL	pfam_Znf_MYND,pfscan_Znf_MYND	-	no_errors	ZMYND15	HGNC	ENSG00000141497				180	0	0	121	50	29.2398
HOXB5	0	genome.wustl.edu	37	17	46670890	46670890	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	46670890	46670890	A	G	SNP	HOXB5	ENST00000239151	human	ensembl	74_37	-1	known	missense	c.155	p.M52T	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXB5	HGNC	ENSG00000120075				39	0	0	40	15	27.2727
VMO1	0	genome.wustl.edu	37	17	4688915	4688915	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	4688915	4688915	G	A	SNP	VMO1	ENST00000328739	human	ensembl	74_37	-1	known	silent	c.351	p.G117	0.886	pfam_VOMI,superfamily_VOMI	pfam_VOMI,superfamily_VOMI	-	no_errors	VMO1	HGNC	ENSG00000182853				38	0	0	37	12	24.4898
SLC35B1	0	genome.wustl.edu	37	17	47780357	47780357	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	47780357	47780357	G	A	SNP	SLC35B1	ENST00000415270	human	ensembl	74_37	-1	known	missense	c.890	p.T297M	1.000	pfam_UAA,pfam_DMT,pfam_Tpt_PEP_trans_dom	pfam_UAA,pfam_DMT,pfam_Tpt_PEP_trans_dom	-	no_errors	SLC35B1	HGNC	ENSG00000121073				71	0	0	47	25	34.7222
PDK2	0	genome.wustl.edu	37	17	48174908	48174908	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	48174908	48174908	C	T	SNP	PDK2	ENST00000503176	human	ensembl	74_37	+1	known	silent	c.240	p.S80	0.050	pfam_BCDHK/PDK_N,superfamily_BCDHK/PDK_N	pfam_BCDHK/PDK_N,pfam_HATPase_ATP-bd,superfamily_BCDHK/PDK_N,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pfscan_Sig_transdc_His_kinase_core	-	no_errors	PDK2	HGNC	ENSG00000005882				73	0	0	46	19	29.2308
COL1A1	0	genome.wustl.edu	37	17	48264045	48264045	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	48264045	48264045	C	T	SNP	COL1A1	ENST00000225964	human	ensembl	74_37	-1	known	missense	c.3770	p.R1257H	1.000	pfam_Fib_collagen_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fib_collagen_C	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL1A1	HGNC	ENSG00000108821				199	0	0	94	50	34.7222
XYLT2	0	genome.wustl.edu	37	17	48435793	48435793	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	48435793	48435793	C	T	SNP	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	missense	c.2167	p.R723W	1.000	NULL	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532				71	0	0	45	28	38.3562
CAMTA2	0	genome.wustl.edu	37	17	4877058	4877058	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	4877058	4877058	C	A	SNP	CAMTA2	ENST00000414043	human	ensembl	74_37	-1	known	missense	c.2092	p.G698C	1.000	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA2	HGNC	ENSG00000108509				78	0	0	46	28	37.8378
WFIKKN2	0	genome.wustl.edu	37	17	48917623	48917623	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	48917623	48917623	C	T	SNP	WFIKKN2	ENST00000311378	human	ensembl	74_37	+1	known	missense	c.974	p.A325V	0.002	superfamily_Prot_inh_Kunz-m	pfam_Prot_inh_Kunz-m,pfam_Ig_I-set,pfam_Netrin_module_non-TIMP,pfam_WAP-type_4-diS_core,pfam_Kazal_dom,pfam_Ig_V-set,superfamily_TIMP-like_OB-fold,superfamily_Prot_inh_Kunz-m,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Ig_sub,smart_Ig_sub2,smart_Prot_inh_Kunz-m,pfscan_Netrin_domain,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Prot_inh_Kunz-m	-	no_errors	WFIKKN2	HGNC	ENSG00000173714				84	0	0	46	35	43.2099
VPS53	0	genome.wustl.edu	37	17	560695	560695	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	560695	560695	C	T	SNP	VPS53	ENST00000575207	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	VPS53	HGNC	ENSG00000141252				23	0	0	17	8	32
DHX40	0	genome.wustl.edu	37	17	57679970	57679970	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	57679970	57679970	G	C	SNP	DHX40	ENST00000251241	human	ensembl	74_37	+1	known	missense	c.1894	p.A632P	1.000	pfam_DUF1605	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX40	HGNC	ENSG00000108406				74	0	0	24	10	29.4118
PPM1D	0	genome.wustl.edu	37	17	58740889	58740889	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	58740889	58740889	C	T	SNP	PPM1D	ENST00000305921	human	ensembl	74_37	+1	known	silent	c.1794	p.H598	0.993	NULL	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1D	HGNC	ENSG00000170836				65	0	0	62	15	19.4805
MRC2	0	genome.wustl.edu	37	17	60766261	60766261	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	60766261	60766261	C	T	SNP	MRC2	ENST00000303375	human	ensembl	74_37	+1	known	missense	c.3274	p.R1092C	1.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin,prints_AntifreezeII	-	no_errors	MRC2	HGNC	ENSG00000011028				30	0	0	24	11	31.4286
KCNH6	0	genome.wustl.edu	37	17	61611343	61611343	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	61611343	61611343	G	A	SNP	KCNH6	ENST00000583023	human	ensembl	74_37	+1	known	missense	c.772	p.V258M	1.000	prints_K_chnl_volt-dep_EAG/ELK/ERG	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_ELK,prints_2pore_dom_K_chnl,pfscan_cNMP-bd_dom	-	no_errors	KCNH6	HGNC	ENSG00000173826				162	0	0	109	68	38.4181
LRRC37A3	0	genome.wustl.edu	37	17	62852005	62852005	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	62852005	62852005	G	T	SNP	LRRC37A3	ENST00000319651	human	ensembl	74_37	-1	known	silent	c.4812	p.I1604	0.036	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A3	HGNC	ENSG00000176809				130	1	0.763359	98	21	17.6471
AMZ2P1	0	genome.wustl.edu	37	17	62968913	62968913	+	RNA	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	62968913	62968913	A	G	SNP	AMZ2P1	ENST00000397713	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AMZ2P1	HGNC	ENSG00000214174				30	0	0	17	10	37.037
PITPNM3	0	genome.wustl.edu	37	17	6367524	6367524	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	6367524	6367524	C	A	SNP	PITPNM3	ENST00000262483	human	ensembl	74_37	-1	known	missense	c.2122	p.G708W	1.000	NULL	pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD	-	no_errors	PITPNM3	HGNC	ENSG00000091622				146	0	0	85	37	30.3279
MIR497HG	0	genome.wustl.edu	37	17	6919203	6919203	+	RNA	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	6919203	6919203	G	T	SNP	MIR497HG	ENST00000443997	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR497HG	HGNC	ENSG00000267532				31	0	0	18	11	37.931
KIF19	0	genome.wustl.edu	37	17	72340420	72340420	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	72340420	72340420	G	A	SNP	KIF19	ENST00000389916	human	ensembl	74_37	+1	known	missense	c.515	p.R172Q	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF19	HGNC	ENSG00000196169				69	0	0	38	26	40.625
ARMC7	0	genome.wustl.edu	37	17	73125123	73125123	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	73125123	73125123	G	A	SNP	ARMC7	ENST00000245543	human	ensembl	74_37	+1	known	missense	c.587	p.R196Q	0.518	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	ARMC7	HGNC	ENSG00000125449				45	0	0	39	24	38.0952
LLGL2	0	genome.wustl.edu	37	17	73570746	73570746	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	73570746	73570746	G	A	SNP	LLGL2	ENST00000392550	human	ensembl	74_37	+1	known	missense	c.3052	p.G1018R	0.995	NULL	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL2	HGNC	ENSG00000073350				29	0	0	24	6	20
RECQL5	0	genome.wustl.edu	37	17	73627684	73627684	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	73627684	73627684	C	T	SNP	RECQL5	ENST00000317905	human	ensembl	74_37	-1	known	missense	c.1294	p.D432N	1.000	tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_RecQ_helicase-like_5,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL5	HGNC	ENSG00000108469				81	0	0	79	7	8.13953
ZBTB4	0	genome.wustl.edu	37	17	7369878	7369878	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	7369878	7369878	G	A	SNP	ZBTB4	ENST00000311403	human	ensembl	74_37	-1	known	silent	c.243	p.T81	0.998	superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB4	HGNC	ENSG00000174282				27	0	0	28	14	33.3333
SRP68	0	genome.wustl.edu	37	17	74036996	74036996	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	74036996	74036996	C	T	SNP	SRP68	ENST00000307877	human	ensembl	74_37	-1	known	missense	c.1588	p.A530T	1.000	NULL	NULL	-	no_errors	SRP68	HGNC	ENSG00000167881				101	0	0	61	21	25.6098
EXOC7	0	genome.wustl.edu	37	17	74094083	74094083	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	74094083	74094083	C	T	SNP	EXOC7	ENST00000335146	human	ensembl	74_37	-1	known	missense	c.434	p.R145H	0.998	superfamily_Cullin_repeat-like_dom	pfam_Exo70,superfamily_Cullin_repeat-like_dom	-	no_errors	EXOC7	HGNC	ENSG00000182473				91	0	0	48	25	34.2466
RNF157	0	genome.wustl.edu	37	17	74141371	74141371	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	74141371	74141371	C	A	SNP	RNF157	ENST00000269391	human	ensembl	74_37	-1	known	missense	c.1985	p.S662I	0.870	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF157	HGNC	ENSG00000141576				16	0	0	12	11	47.8261
POLR2A	0	genome.wustl.edu	37	17	7416578	7416578	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	7416578	7416578	G	A	SNP	POLR2A	ENST00000322644	human	ensembl	74_37	+1	known	silent	c.4995	p.S1665	0.105	pfam_RNA_pol_II_repeat_euk	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_Rpb1_6,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_7,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,pfam_RNA_pol_II_repeat_euk,smart_RNA_pol_N	-	no_errors	POLR2A	HGNC	ENSG00000181222				37	0	0	56	11	16.4179
AANAT	0	genome.wustl.edu	37	17	74465953	74465953	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	74465953	74465953	C	T	SNP	AANAT	ENST00000250615	human	ensembl	74_37	+1	known	silent	c.660	p.A220	0.000	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	AANAT	HGNC	ENSG00000129673				11	0	0	13	9	40.9091
MGAT5B	0	genome.wustl.edu	37	17	74865008	74865008	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	74865008	74865008	G	A	SNP	MGAT5B	ENST00000374998	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	MGAT5B	HGNC	ENSG00000167889				14	0	0	10	17	62.963
TNRC6C	0	genome.wustl.edu	37	17	76046871	76046871	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	76046871	76046871	G	T	SNP	TNRC6C	ENST00000335749	human	ensembl	74_37	+1	known	missense	c.1728	p.K576N	0.945	NULL	pfam_Argonaute_hook_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TNRC6C	HGNC	ENSG00000078687				94	0	0	64	33	34.0206
TMC6	0	genome.wustl.edu	37	17	76117688	76117688	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	76117688	76117688	G	A	SNP	TMC6	ENST00000322914	human	ensembl	74_37	-1	known	silent	c.1332	p.T444	0.000	NULL	pfam_TMC	-	no_errors	TMC6	HGNC	ENSG00000141524				36	0	0	35	23	39.6552
ENPP7	0	genome.wustl.edu	37	17	77708985	77708985	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	77708985	77708985	G	A	SNP	ENPP7	ENST00000328313	human	ensembl	74_37	+1	known	silent	c.543	p.A181	0.000	pfam_Phosphodiest/P_Trfase,pfam_Metalloenzyme,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Metalloenzyme,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP7	HGNC	ENSG00000182156				84	0	0	71	32	31.068
LOC100294362	0	genome.wustl.edu	37	17	78327309	78327309	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	78327309	78327309	C	T	SNP	LOC100294362	ENST00000575034	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.208	-	-	-	no_errors	CTD-2047H16.4	Clone_based_vega_gene	ENSG00000263069				11	0	0	12	9	42.8571
RPTOR	0	genome.wustl.edu	37	17	78796081	78796081	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	78796081	78796081	C	T	SNP	RPTOR	ENST00000306801	human	ensembl	74_37	+1	known	missense	c.971	p.A324V	1.000	prints_Raptor	pfam_HEAT,pfam_WD40_repeat,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom,prints_Raptor	-	no_errors	RPTOR	HGNC	ENSG00000141564				347	1	0.287356	237	130	35.4223
TMEM105	0	genome.wustl.edu	37	17	79287760	79287760	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	79287760	79287760	G	A	SNP	TMEM105	ENST00000332900	human	ensembl	74_37	-1	known	silent	c.81	p.I27	0.010	NULL	NULL	-	no_errors	TMEM105	HGNC	ENSG00000185332				74	0	0	46	28	37.8378
ALOX12B	0	genome.wustl.edu	37	17	7976518	7976518	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	7976518	7976518	G	A	SNP	ALOX12B	ENST00000319144	human	ensembl	74_37	-1	known	missense	c.1874	p.T625M	0.972	pfam_LipOase_C,superfamily_LipOase_C,prints_LipOase_mml	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_C,prints_LipOase_mml	-	no_errors	ALOX12B	HGNC	ENSG00000179477				299	0	0	162	105	39.3258
ALOX12B	0	genome.wustl.edu	37	17	7976593	7976593	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	7976593	7976593	C	T	SNP	ALOX12B	ENST00000319144	human	ensembl	74_37	-1	known	missense	c.1799	p.R600Q	0.046	pfam_LipOase_C,superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_C,prints_LipOase_mml	-	no_errors	ALOX12B	HGNC	ENSG00000179477				347	0	0	202	117	36.6771
NOTUM	0	genome.wustl.edu	37	17	79913389	79913389	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	79913389	79913389	G	A	SNP	NOTUM	ENST00000409678	human	ensembl	74_37	-1	known	silent	c.1020	p.D340	0.690	pfam_NOTUM	pfam_NOTUM	-	no_errors	NOTUM	HGNC	ENSG00000185269				44	0	0	24	11	31.4286
PFAS	0	genome.wustl.edu	37	17	8158873	8158873	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	8158873	8158873	C	T	SNP	PFAS	ENST00000314666	human	ensembl	74_37	+1	known	silent	c.438	p.H146	1.000	tigrfam_PRibForGlyAmidine_synth	pfam_AIR_synth_C_dom,pfam_AIR_synth_N_dom,superfamily_PurM_N-like,superfamily_AIR_synth_C_dom,tigrfam_PRibForGlyAmidine_synth	-	no_errors	PFAS	HGNC	ENSG00000178921				80	0	0	78	10	11.3636
KRBA2	0	genome.wustl.edu	37	17	8273459	8273459	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	8273459	8273459	G	A	SNP	KRBA2	ENST00000331336	human	ensembl	74_37	-1	known	missense	c.472	p.R158C	0.850	NULL	pfam_Krueppel-associated_box,superfamily_RNaseH-like_dom,superfamily_Krueppel-associated_box,pfscan_Integrase_cat-core	-	no_errors	KRBA2	HGNC	ENSG00000184619				231	0	0	113	55	32.7381
MYH10	0	genome.wustl.edu	37	17	8411973	8411973	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	8411973	8411973	C	T	SNP	MYH10	ENST00000396239	human	ensembl	74_37	-1	known	missense	c.3083	p.R1028H	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026				108	0	0	50	33	39.759
GAS7	0	genome.wustl.edu	37	17	9873065	9873065	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	9873065	9873065	C	T	SNP	GAS7	ENST00000432992	human	ensembl	74_37	-1	known	missense	c.400	p.A134T	0.969	NULL	pfam_FCH_dom,pfam_WW_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_WW_dom,smart_SH3_domain,smart_WW_dom,smart_FCH_dom,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_WW_dom	-	no_errors	GAS7	HGNC	ENSG00000007237				113	0	0	57	28	32.9412
ABR	0	genome.wustl.edu	37	17	994924	994924	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	994924	994924	C	T	SNP	ABR	ENST00000302538	human	ensembl	74_37	-1	known	missense	c.512	p.G171D	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_RhoGAP_dom,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	ABR	HGNC	ENSG00000159842				121	0	0	77	31	28.7037
PSMG2	0	genome.wustl.edu	37	18	12718569	12718569	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	12718569	12718569	C	T	SNP	PSMG2	ENST00000317615	human	ensembl	74_37	+1	known	silent	c.342	p.G114	0.005	pfam_Proteasome_assmbl_chaperone_2,pirsf_Proteasome_assmbl_chp_2_euk	pfam_Proteasome_assmbl_chaperone_2,pirsf_Proteasome_assmbl_chp_2_euk	-	no_errors	PSMG2	HGNC	ENSG00000128789				59	0	0	27	14	34.1463
MC5R	0	genome.wustl.edu	37	18	13826229	13826229	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	13826229	13826229	G	A	SNP	MC5R	ENST00000324750	human	ensembl	74_37	+1	known	silent	c.465	p.T155	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melcrt_ACTH_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melancort_rcpt_5,prints_Melcrt_ACTH_rcpt,prints_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC5R	HGNC	ENSG00000176136				252	0	0	173	90	34.2205
ZNF521	0	genome.wustl.edu	37	18	22806909	22806909	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	22806909	22806909	G	T	SNP	ZNF521	ENST00000361524	human	ensembl	74_37	-1	known	missense	c.973	p.L325M	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF521	HGNC	ENSG00000198795				42	0	0	41	23	35.9375
DSC3	0	genome.wustl.edu	37	18	28602425	28602425	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	28602425	28602425	C	T	SNP	DSC3	ENST00000360428	human	ensembl	74_37	-1	known	silent	c.819	p.P273	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin,prints_Desmosomal_cadherin	-	no_errors	DSC3	HGNC	ENSG00000134762				57	0	0	72	4	5.26316
B4GALT6	0	genome.wustl.edu	37	18	29218625	29218625	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	29218625	29218625	C	T	SNP	B4GALT6	ENST00000306851	human	ensembl	74_37	-1	known	silent	c.570	p.A190	1.000	pfam_Galactosyl_T_C	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT6	HGNC	ENSG00000118276				97	0	0	52	21	28.7671
ELP2	0	genome.wustl.edu	37	18	33751036	33751036	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	33751036	33751036	G	A	SNP	ELP2	ENST00000358232	human	ensembl	74_37	+1	known	missense	c.2237	p.C746Y	0.997	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ELP2	HGNC	ENSG00000134759				51	0	0	26	9	25.7143
FHOD3	0	genome.wustl.edu	37	18	34320643	34320643	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	34320643	34320643	G	A	SNP	FHOD3	ENST00000257209	human	ensembl	74_37	+1	known	missense	c.3076	p.D1026N	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD3	HGNC	ENSG00000134775				32	0	0	29	14	32.5581
SETBP1	0	genome.wustl.edu	37	18	42532361	42532361	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	42532361	42532361	G	A	SNP	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	missense	c.3056	p.R1019H	1.000	smart_AT_hook_DNA-bd_motif	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217				84	0	0	49	23	31.9444
SETBP1	0	genome.wustl.edu	37	18	42643182	42643182	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	42643182	42643182	A	G	SNP	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	missense	c.4310	p.K1437R	1.000	NULL	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217				46	0	0	52	14	21.2121
SLC14A2	0	genome.wustl.edu	37	18	43204734	43204734	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	43204734	43204734	G	A	SNP	SLC14A2	ENST00000255226	human	ensembl	74_37	+1	known	silent	c.105	p.P35	1.000	NULL	pfam_Urea_transporter	-	no_errors	SLC14A2	HGNC	ENSG00000132874				112	0	0	108	43	28.4768
SLC14A2	0	genome.wustl.edu	37	18	43205722	43205722	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	43205722	43205722	C	T	SNP	SLC14A2	ENST00000255226	human	ensembl	74_37	+1	known	silent	c.225	p.D75	0.007	NULL	pfam_Urea_transporter	-	no_errors	SLC14A2	HGNC	ENSG00000132874				50	0	0	24	12	33.3333
CNDP1	0	genome.wustl.edu	37	18	72228119	72228119	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	72228119	72228119	C	A	SNP	CNDP1	ENST00000358821	human	ensembl	74_37	+1	known	missense	c.332	p.P111H	1.000	pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP1	HGNC	ENSG00000150656				217	0	0	144	69	32.3944
TSHZ1	0	genome.wustl.edu	37	18	72998924	72998924	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	72998924	72998924	A	C	SNP	TSHZ1	ENST00000580243	human	ensembl	74_37	+1	known	missense	c.1562	p.E521A	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ1	HGNC	ENSG00000179981				166	0	0	107	58	35.1515
ZNF236	0	genome.wustl.edu	37	18	74672689	74672689	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	74672689	74672689	C	T	SNP	ZNF236	ENST00000253159	human	ensembl	74_37	+1	known	missense	c.5291	p.A1764V	0.033	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF236	HGNC	ENSG00000130856				170	1	0.584795	87	62	41.6107
NFATC1	0	genome.wustl.edu	37	18	77227522	77227522	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	77227522	77227522	G	A	SNP	NFATC1	ENST00000427363	human	ensembl	74_37	+1	known	missense	c.2032	p.V678I	1.000	pfam_IPT,superfamily_Ig_E-set,smart_IPT,prints_NFAT	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC1	HGNC	ENSG00000131196				61	0	0	44	30	40.5405
KCNG2	0	genome.wustl.edu	37	18	77623865	77623865	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	77623865	77623865	C	T	SNP	KCNG2	ENST00000316249	human	ensembl	74_37	+1	known	silent	c.198	p.R66	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv9	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNG2	HGNC	ENSG00000178342				28	0	0	17	17	50
PTPRM	0	genome.wustl.edu	37	18	7949201	7949201	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	7949201	7949201	C	T	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	missense	c.686	p.P229L	0.998	pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC	ENSG00000173482				89	0	0	49	24	32.8767
SOGA2	0	genome.wustl.edu	37	18	8819028	8819028	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	8819028	8819028	G	A	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	missense	c.2927	p.R976H	0.008	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502				120	0	0	84	44	34.375
SOGA2	0	genome.wustl.edu	37	18	8825115	8825115	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	8825115	8825115	G	A	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	missense	c.3607	p.D1203N	0.750	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502				83	0	0	113	6	5.04202
ICAM1	0	genome.wustl.edu	37	19	10395521	10395521	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	10395521	10395521	C	T	SNP	ICAM1	ENST00000264832	human	ensembl	74_37	+1	known	nonsense	c.1243	p.Q415*	0.754	smart_Ig_sub	pfam_ICAM_N,smart_Ig_sub,prints_ICAM_VCAM_N,prints_ICAM	-	no_errors	ICAM1	HGNC	ENSG00000090339				71	0	0	58	21	26.5823
HMHA1	0	genome.wustl.edu	37	19	1081929	1081929	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	1081929	1081929	T	C	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	missense	c.2486	p.I829T	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448				43	0	0	41	11	21.1538
SMARCA4	0	genome.wustl.edu	37	19	11138594	11138594	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	11138594	11138594	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3350	p.A1117V	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616				224	0	0	181	17	8.58586
SMARCA4	0	genome.wustl.edu	37	19	11143993	11143993	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	11143993	11143993	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3574	p.R1192C	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616				99	0	0	57	49	46.2264
LDLR	0	genome.wustl.edu	37	19	11223968	11223968	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	11223968	11223968	C	A	SNP	LDLR	ENST00000558518	human	ensembl	74_37	+1	known	missense	c.1201	p.L401I	1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LDLR	HGNC	ENSG00000130164				70	0	0	37	26	41.2698
ACP5	0	genome.wustl.edu	37	19	11686047	11686047	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	11686047	11686047	G	A	SNP	ACP5	ENST00000218758	human	ensembl	74_37	-1	known	silent	c.756	p.G252	0.056	NULL	pfam_PEstase_dom	-	no_errors	ACP5	HGNC	ENSG00000102575				63	0	0	52	21	28.7671
ZNF136	0	genome.wustl.edu	37	19	12296983	12296983	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	12296983	12296983	A	T	SNP	ZNF136	ENST00000343979	human	ensembl	74_37	+1	known	missense	c.185	p.N62I	0.828	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF136	HGNC	ENSG00000196646				33	0	0	14	6	30
RNASEH2A	0	genome.wustl.edu	37	19	12920927	12920927	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	12920927	12920927	C	T	SNP	RNASEH2A	ENST00000221486	human	ensembl	74_37	+1	known	missense	c.454	p.R152W	0.998	pfam_RNase_HII/HIII_dom,superfamily_RNaseH-like_dom,tigrfam_RNase_H2_suA	pfam_RNase_HII/HIII_dom,superfamily_RNaseH-like_dom,tigrfam_RNase_H2_suA	-	no_errors	RNASEH2A	HGNC	ENSG00000104889				192	0	0	125	67	34.8958
CACNA1A	0	genome.wustl.edu	37	19	13368180	13368180	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	13368180	13368180	C	A	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	missense	c.4574	p.S1525I	1.000	prints_VDCCAlpha1	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837				41	0	0	26	17	39.5349
CACNA1A	0	genome.wustl.edu	37	19	13387910	13387910	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	13387910	13387910	G	A	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	silent	c.3855	p.G1285	0.099	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837				39	0	0	31	19	38
CACNA1A	0	genome.wustl.edu	37	19	13616860	13616860	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	13616860	13616860	G	A	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	missense	c.179	p.A60V	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837				43	0	0	36	16	30.7692
NDUFS7	0	genome.wustl.edu	37	19	1390983	1390983	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	1390983	1390983	G	A	SNP	NDUFS7	ENST00000233627	human	ensembl	74_37	+1	known	silent	c.342	p.P114	0.679	pfam_NADH_UbQ_OxRdtase-like_20kDa,tigrfam_NADH_UQ_OxRdtase_20Kd_su	pfam_NADH_UbQ_OxRdtase-like_20kDa,tigrfam_NADH_UQ_OxRdtase_20Kd_su	-	no_errors	NDUFS7	HGNC	ENSG00000115286				76	0	0	51	27	34.6154
CD97	0	genome.wustl.edu	37	19	14516664	14516664	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	14516664	14516664	G	A	SNP	CD97	ENST00000242786	human	ensembl	74_37	+1	known	silent	c.1734	p.S578	0.690	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_EMR1_rcpt	pfam_GPCR_2_secretin-like,pfam_EGF-like_Ca-bd_dom,pfam_GPS_dom,pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_CD97,prints_GPCR_2_secretin-like,prints_GPCR_2_EMR1_rcpt	-	no_errors	CD97	HGNC	ENSG00000123146				111	0	0	77	55	41.6667
SYDE1	0	genome.wustl.edu	37	19	15223241	15223241	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	15223241	15223241	G	A	SNP	SYDE1	ENST00000342784	human	ensembl	74_37	+1	known	missense	c.1663	p.V555M	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	SYDE1	HGNC	ENSG00000105137				17	0	0	13	10	43.4783
BRD4	0	genome.wustl.edu	37	19	15376438	15376438	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	15376438	15376438	G	A	SNP	BRD4	ENST00000263377	human	ensembl	74_37	-1	known	silent	c.576	p.G192	0.911	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD4	HGNC	ENSG00000141867				314	0	0	148	89	37.5527
MEX3D	0	genome.wustl.edu	37	19	1556759	1556759	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	1556759	1556759	C	T	SNP	MEX3D	ENST00000388824	human	ensembl	74_37	-1	known	silent	c.759	p.T253	0.377	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3D	HGNC	ENSG00000181588				57	0	0	53	27	33.75
CYP4F3	0	genome.wustl.edu	37	19	15760964	15760964	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	15760964	15760964	G	T	SNP	CYP4F3	ENST00000221307	human	ensembl	74_37	+1	known	missense	c.889	p.D297Y	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F3	HGNC	ENSG00000186529				84	0	0	50	25	33.3333
CYP4F2	0	genome.wustl.edu	37	19	16003198	16003198	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	16003198	16003198	C	T	SNP	CYP4F2	ENST00000221700	human	ensembl	74_37	-1	known	missense	c.446	p.R149Q	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-II	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F2	HGNC	ENSG00000186115				123	0	0	83	43	34.127
OR10H4	0	genome.wustl.edu	37	19	16060236	16060236	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	16060236	16060236	G	A	SNP	OR10H4	ENST00000322107	human	ensembl	74_37	+1	known	missense	c.419	p.R140H	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H4	HGNC	ENSG00000176231				120	0	0	100	60	37.5
F2RL3	0	genome.wustl.edu	37	19	17000816	17000816	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	17000816	17000816	C	T	SNP	F2RL3	ENST00000248076	human	ensembl	74_37	+1	known	missense	c.542	p.P181L	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Prot_act_rcpt_4,prints_GPCR_Rhodpsn,prints_Protea_act_rcpt	-	no_errors	F2RL3	HGNC	ENSG00000127533				22	0	0	10	14	58.3333
CPAMD8	0	genome.wustl.edu	37	19	17057980	17057980	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	17057980	17057980	G	A	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.2707	p.R903C	1.000	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				291	0	0	209	59	22.0149
MYO9B	0	genome.wustl.edu	37	19	17313014	17313014	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	17313014	17313014	C	T	SNP	MYO9B	ENST00000594824	human	ensembl	74_37	+1	known	missense	c.4738	p.R1580C	0.952	NULL	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9B	HGNC	ENSG00000099331				33	0	0	32	12	27.2727
ANO8	0	genome.wustl.edu	37	19	17438570	17438570	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	17438570	17438570	G	A	SNP	ANO8	ENST00000159087	human	ensembl	74_37	-1	known	silent	c.2346	p.S782	0.808	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO8	HGNC	ENSG00000074855				113	0	0	114	8	6.55738
ENSG00000268032	0	genome.wustl.edu	37	19	18141733	18141733	+	RNA	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	18141733	18141733	C	A	SNP	ENSG00000268032	ENST00000594957	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTB-52I2.4	Clone_based_vega_gene	ENSG00000268032				69	0	0	57	28	32.9412
MAST3	0	genome.wustl.edu	37	19	18234816	18234816	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	18234816	18234816	C	T	SNP	MAST3	ENST00000262811	human	ensembl	74_37	+1	known	missense	c.614	p.A205V	1.000	pfam_MA_Ser/Thr_Kinase_dom,superfamily_MAST_pre-PK_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST3	HGNC	ENSG00000099308				10	0	0	8	7	46.6667
MAST3	0	genome.wustl.edu	37	19	18245637	18245637	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	18245637	18245637	C	T	SNP	MAST3	ENST00000262811	human	ensembl	74_37	+1	known	missense	c.1628	p.T543M	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST3	HGNC	ENSG00000099308				48	0	0	40	16	28.5714
REXO1	0	genome.wustl.edu	37	19	1826907	1826907	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	1826907	1826907	C	T	SNP	REXO1	ENST00000170168	human	ensembl	74_37	-1	known	silent	c.1881	p.K627	0.989	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	REXO1	HGNC	ENSG00000079313				10	0	0	5	5	50
KLF16	0	genome.wustl.edu	37	19	1854671	1854671	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	1854671	1854671	C	A	SNP	KLF16	ENST00000250916	human	ensembl	74_37	-1	known	silent	c.546	p.T182	0.083	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF16	HGNC	ENSG00000129911				54	0	0	34	29	46.0317
ENSG00000268938	0	genome.wustl.edu	37	19	18643374	18643374	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	18643374	18643374	G	A	SNP	ENSG00000268938	ENST00000597837	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC005387.3	Clone_based_vega_gene	ENSG00000268938				18	0	0	18	8	30.7692
KLHL26	0	genome.wustl.edu	37	19	18779360	18779360	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	18779360	18779360	C	T	SNP	KLHL26	ENST00000300976	human	ensembl	74_37	+1	known	missense	c.1153	p.R385C	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL26	HGNC	ENSG00000167487				36	0	0	25	19	43.1818
CRTC1	0	genome.wustl.edu	37	19	18856697	18856697	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	18856697	18856697	G	T	SNP	CRTC1	ENST00000338797	human	ensembl	74_37	+1	known	missense	c.356	p.R119M	1.000	NULL	NULL	-	no_errors	CRTC1	HGNC	ENSG00000105662				154	0	0	95	24	20.1681
RFXANK	0	genome.wustl.edu	37	19	19308955	19308955	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	19308955	19308955	G	A	SNP	RFXANK	ENST00000303088	human	ensembl	74_37	+1	known	missense	c.478	p.A160T	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_DNA-bd_RFXANK,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_DNA-bd_RFXANK,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	RFXANK	HGNC	ENSG00000064490				171	0	0	112	65	36.7232
TM6SF2	0	genome.wustl.edu	37	19	19381909	19381909	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	19381909	19381909	C	T	SNP	TM6SF2	ENST00000389363	human	ensembl	74_37	-1	known	missense	c.121	p.A41T	0.041	NULL	pfam_Transmembrane_6/97	-	no_errors	TM6SF2	HGNC	ENSG00000213996				145	0	0	119	50	29.5858
CILP2	0	genome.wustl.edu	37	19	19655921	19655921	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	19655921	19655921	G	A	SNP	CILP2	ENST00000291495	human	ensembl	74_37	+1	known	missense	c.2567	p.R856H	0.631	NULL	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,superfamily_Carb-bd-like_fold,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP2	HGNC	ENSG00000160161				80	0	0	49	30	37.9747
ZNF14	0	genome.wustl.edu	37	19	19822871	19822871	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	19822871	19822871	G	A	SNP	ZNF14	ENST00000344099	human	ensembl	74_37	-1	known	nonsense	c.1219	p.R407*	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF14	HGNC	ENSG00000105708				126	0	0	66	41	38.3178
SF3A2	0	genome.wustl.edu	37	19	2246901	2246901	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	2246901	2246901	C	T	SNP	SF3A2	ENST00000221494	human	ensembl	74_37	+1	known	silent	c.426	p.A142	0.434	NULL	smart_Znf_U1,pfscan_Znf_C2H2_matrin	-	no_errors	SF3A2	HGNC	ENSG00000104897				65	0	0	41	19	31.6667
ZNF729	0	genome.wustl.edu	37	19	22497680	22497680	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	22497680	22497680	C	A	SNP	ZNF729	ENST00000601693	human	ensembl	74_37	+1	novel	silent	c.1461	p.P487	0.352	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF729	HGNC	ENSG00000196350				44	0	0	39	14	26.4151
JSRP1	0	genome.wustl.edu	37	19	2252349	2252349	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	2252349	2252349	G	A	SNP	JSRP1	ENST00000300961	human	ensembl	74_37	-1	known	silent	c.975	p.R325	0.000	NULL	NULL	-	no_errors	JSRP1	HGNC	ENSG00000167476				8	0	0	13	3	18.75
C19orf35	0	genome.wustl.edu	37	19	2280892	2280892	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	2280892	2280892	G	A	SNP	C19orf35	ENST00000342063	human	ensembl	74_37	-1	known	silent	c.39	p.P13	0.001	NULL	NULL	-	no_errors	C19orf35	HGNC	ENSG00000188305				34	0	0	25	13	34.2105
ZNF91	0	genome.wustl.edu	37	19	23543328	23543328	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	23543328	23543328	G	A	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	missense	c.2453	p.T818I	0.994	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232				68	0	0	47	13	21.6667
ZNF91	0	genome.wustl.edu	37	19	23543336	23543336	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	23543336	23543336	C	T	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	silent	c.2445	p.K815	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232				66	0	0	42	10	19.2308
ZNF91	0	genome.wustl.edu	37	19	23544220	23544220	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	23544220	23544220	C	T	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	missense	c.1561	p.E521K	0.004	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232				48	0	0	31	8	20.5128
RPSAP58	0	genome.wustl.edu	37	19	24010261	24010261	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	24010261	24010261	G	A	SNP	RPSAP58	ENST00000354585	human	ensembl	74_37	+1	known	missense	c.298	p.A100T	1.000	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom,prints_Ribosomal_S2,tigrfam_Ribosomal_S2_euk/arc	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom,prints_Ribosomal_S2,tigrfam_Ribosomal_S2_euk/arc	-	no_errors	RPSAP58	HGNC	ENSG00000205246				51	0	0	33	15	31.25
ZNF57	0	genome.wustl.edu	37	19	2916959	2916959	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	2916959	2916959	G	T	SNP	ZNF57	ENST00000306908	human	ensembl	74_37	+1	known	missense	c.340	p.G114C	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF57	HGNC	ENSG00000171970				88	0	0	34	16	32
C19orf12	0	genome.wustl.edu	37	19	30193641	30193641	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	30193641	30193641	G	A	SNP	C19orf12	ENST00000392278	human	ensembl	74_37	-1	known	missense	c.437	p.A146V	0.990	NULL	NULL	-	no_errors	C19orf12	HGNC	ENSG00000131943				66	0	0	45	26	36.6197
ZNF536	0	genome.wustl.edu	37	19	31040213	31040213	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	31040213	31040213	G	A	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	silent	c.3687	p.P1229	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597				60	0	0	32	24	42.8571
NCLN	0	genome.wustl.edu	37	19	3207221	3207221	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	3207221	3207221	C	A	SNP	NCLN	ENST00000246117	human	ensembl	74_37	+1	known	missense	c.1525	p.Q509K	1.000	pirsf_Nicalin	pfam_Peptidase_M28,pfam_Nicastrin,pirsf_Nicalin	-	no_errors	NCLN	HGNC	ENSG00000125912				181	0	0	84	54	39.1304
MAG	0	genome.wustl.edu	37	19	35786621	35786621	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	35786621	35786621	G	A	SNP	MAG	ENST00000392213	human	ensembl	74_37	+1	known	missense	c.152	p.R51Q	1.000	smart_Ig_sub	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MAG	HGNC	ENSG00000105695				109	0	0	79	44	35.7724
KMT2B	0	genome.wustl.edu	37	19	36228111	36228111	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	36228111	36228111	G	A	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	silent	c.7497	p.Q2499	1.000	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				15	0	0	13	6	31.5789
NFKBID	0	genome.wustl.edu	37	19	36380850	36380850	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	36380850	36380850	C	T	SNP	NFKBID	ENST00000352614	human	ensembl	74_37	-1	known	missense	c.1286	p.R429H	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	NFKBID	HGNC	ENSG00000167604				88	0	0	43	28	39.4366
LRFN3	0	genome.wustl.edu	37	19	36430728	36430728	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	36430728	36430728	G	A	SNP	LRFN3	ENST00000246529	human	ensembl	74_37	+1	known	missense	c.401	p.R134H	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN3	HGNC	ENSG00000126243				67	0	0	52	28	35
WDR62	0	genome.wustl.edu	37	19	36579994	36579994	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	36579994	36579994	G	A	SNP	WDR62	ENST00000401500	human	ensembl	74_37	+1	known	missense	c.1823	p.R608H	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR62	HGNC	ENSG00000075702				63	0	0	34	28	45.1613
APBA3	0	genome.wustl.edu	37	19	3751226	3751226	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	3751226	3751226	G	A	SNP	APBA3	ENST00000316757	human	ensembl	74_37	-1	known	silent	c.1617	p.H539	0.847	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA3	HGNC	ENSG00000011132				8	0	0	7	2	22.2222
CAPN12	0	genome.wustl.edu	37	19	39229238	39229238	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	39229238	39229238	C	T	SNP	CAPN12	ENST00000328867	human	ensembl	74_37	-1	known	silent	c.780	p.A260	0.027	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN12	HGNC	ENSG00000182472				76	0	0	47	17	26.5625
ECH1	0	genome.wustl.edu	37	19	39306274	39306274	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	39306274	39306274	G	A	SNP	ECH1	ENST00000221418	human	ensembl	74_37	-1	known	silent	c.966	p.T322	0.000	NULL	pfam_Crotonase_core_superfam	-	no_errors	ECH1	HGNC	ENSG00000104823				58	0	0	37	10	21.2766
HNRNPL	0	genome.wustl.edu	37	19	39329104	39329104	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	39329104	39329104	T	C	SNP	HNRNPL	ENST00000221419	human	ensembl	74_37	-1	known	missense	c.1490	p.Q497R	1.000	tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	HNRNPL	HGNC	ENSG00000104824				47	0	0	41	18	30.5085
TIMM50	0	genome.wustl.edu	37	19	39976855	39976855	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	39976855	39976855	G	A	SNP	TIMM50	ENST00000314349	human	ensembl	74_37	+1	known	missense	c.830	p.R277H	1.000	pfam_NIF,superfamily_HAD-like_dom,smart_NIF,pfscan_NIF	pfam_NIF,superfamily_HAD-like_dom,smart_NIF,pfscan_NIF	-	no_errors	TIMM50	HGNC	ENSG00000105197				518	0	0	347	117	25.2155
PIAS4	0	genome.wustl.edu	37	19	4037447	4037447	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	4037447	4037447	G	A	SNP	PIAS4	ENST00000262971	human	ensembl	74_37	+1	known	silent	c.1218	p.P406	0.010	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS4	HGNC	ENSG00000105229				31	0	0	28	10	26.3158
TTC9B	0	genome.wustl.edu	37	19	40724061	40724061	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	40724061	40724061	A	G	SNP	TTC9B	ENST00000311308	human	ensembl	74_37	-1	known	silent	c.228	p.Y76	1.000	smart_TPR_repeat	pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC9B	HGNC	ENSG00000174521				41	0	0	22	26	54.1667
HIPK4	0	genome.wustl.edu	37	19	40886445	40886445	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	40886445	40886445	G	A	SNP	HIPK4	ENST00000291823	human	ensembl	74_37	-1	known	missense	c.1453	p.R485C	0.999	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK4	HGNC	ENSG00000160396				181	0	0	136	66	32.6733
HIPK4	0	genome.wustl.edu	37	19	40895662	40895662	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	40895662	40895662	G	A	SNP	HIPK4	ENST00000291823	human	ensembl	74_37	-1	known	missense	c.148	p.R50C	0.938	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK4	HGNC	ENSG00000160396				188	0	0	123	78	38.806
CYP2B6	0	genome.wustl.edu	37	19	41522587	41522587	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	41522587	41522587	C	T	SNP	CYP2B6	ENST00000324071	human	ensembl	74_37	+1	known	missense	c.1331	p.A444V	0.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2B-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I_CYP2A-like	-	no_errors	CYP2B6	HGNC	ENSG00000197408				58	0	0	27	19	41.3043
PSG10P	0	genome.wustl.edu	37	19	43348583	43348583	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	43348583	43348583	G	A	SNP	PSG10P	ENST00000597171	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PSG10P	HGNC	ENSG00000248257				336	0	0	198	111	35.9223
SH3GL1	0	genome.wustl.edu	37	19	4362734	4362734	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	4362734	4362734	C	A	SNP	SH3GL1	ENST00000269886	human	ensembl	74_37	-1	known	splice_site	c.729-1	e8-1	1.000	-	-	-	no_errors	SH3GL1	HGNC	ENSG00000141985				102	0	0	61	46	42.9907
ENSG00000269583	0	genome.wustl.edu	37	19	44079013	44079013	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	44079013	44079013	C	T	SNP	ENSG00000269583	ENST00000600242	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	L34079.4	Clone_based_vega_gene	ENSG00000269583				31	0	0	14	15	51.7241
UBXN6	0	genome.wustl.edu	37	19	4446528	4446528	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	4446528	4446528	C	T	SNP	UBXN6	ENST00000301281	human	ensembl	74_37	-1	known	missense	c.889	p.A297T	0.438	NULL	pfam_PUB_domain,pfam_UBX,smart_PUG-dom,smart_UBX,pfscan_UBX	-	no_errors	UBXN6	HGNC	ENSG00000167671				60	0	0	30	14	31.8182
RELB	0	genome.wustl.edu	37	19	45532169	45532169	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	45532169	45532169	C	T	SNP	RELB	ENST00000221452	human	ensembl	74_37	+1	known	missense	c.910	p.R304W	1.000	superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	RELB	HGNC	ENSG00000104856				8	0	0	11	2	15.3846
TMEM143	0	genome.wustl.edu	37	19	48846619	48846619	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	48846619	48846619	G	T	SNP	TMEM143	ENST00000293261	human	ensembl	74_37	-1	known	silent	c.654	p.G218	0.685	NULL	pfam_DUF3754	-	no_errors	TMEM143	HGNC	ENSG00000161558				26	0	0	26	3	10.3448
FUT1	0	genome.wustl.edu	37	19	49253486	49253486	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	49253486	49253486	G	A	SNP	FUT1	ENST00000310160	human	ensembl	74_37	-1	known	silent	c.1053	p.G351	0.996	pfam_Glyco_trans_11	pfam_Glyco_trans_11	-	no_errors	FUT1	HGNC	ENSG00000174951				23	0	0	23	7	23.3333
NUCB1	0	genome.wustl.edu	37	19	49409052	49409052	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	49409052	49409052	G	A	SNP	NUCB1	ENST00000263273	human	ensembl	74_37	+1	known	missense	c.286	p.V96I	0.989	NULL	pfscan_EF_hand_dom	-	no_errors	NUCB1	HGNC	ENSG00000104805				102	0	0	60	29	32.5843
GYS1	0	genome.wustl.edu	37	19	49488801	49488801	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	49488801	49488801	G	A	SNP	GYS1	ENST00000323798	human	ensembl	74_37	-1	known	missense	c.740	p.A247V	0.997	pfam_Glycogen_synth,pfam_Starch_synth_cat_dom	pfam_Glycogen_synth,pfam_Glyco_trans_1,pfam_Starch_synth_cat_dom	-	no_errors	GYS1	HGNC	ENSG00000104812				77	0	0	48	32	40
RUVBL2	0	genome.wustl.edu	37	19	49514455	49514455	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	49514455	49514455	T	G	SNP	RUVBL2	ENST00000595090	human	ensembl	74_37	+1	known	missense	c.889	p.F297V	1.000	pfam_TIP49_C,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_TIP49_C,pfam_ATPase_AAA_core,pfam_DNA_helicase_DnaB-like_C,superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold,smart_AAA+_ATPase,prints_DNA_repair_RadA	-	no_errors	RUVBL2	HGNC	ENSG00000183207				60	0	0	57	29	33.7209
TRPM4	0	genome.wustl.edu	37	19	49685991	49685991	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	49685991	49685991	C	T	SNP	TRPM4	ENST00000252826	human	ensembl	74_37	+1	known	missense	c.1420	p.R474C	0.211	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM4	HGNC	ENSG00000130529				65	0	0	68	7	9.33333
TSKS	0	genome.wustl.edu	37	19	50247622	50247622	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	50247622	50247622	G	A	SNP	TSKS	ENST00000246801	human	ensembl	74_37	-1	known	silent	c.1227	p.S409	0.996	NULL	NULL	-	no_errors	TSKS	HGNC	ENSG00000126467				94	0	0	76	29	27.619
TSKS	0	genome.wustl.edu	37	19	50265289	50265289	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	50265289	50265289	G	A	SNP	TSKS	ENST00000246801	human	ensembl	74_37	-1	known	missense	c.371	p.P124L	0.084	NULL	NULL	-	no_errors	TSKS	HGNC	ENSG00000126467				99	0	0	44	31	41.3333
SHANK1	0	genome.wustl.edu	37	19	51170213	51170213	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	51170213	51170213	C	T	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	silent	c.5028	p.P1676	0.565	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681				17	0	0	16	19	54.2857
HAS1	0	genome.wustl.edu	37	19	52216788	52216788	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	52216788	52216788	C	A	SNP	HAS1	ENST00000601714	human	ensembl	74_37	-1	known	silent	c.1650	p.A550	0.018	NULL	pfam_Chitin_synth_fng,pfam_Glyco_trans_2	-	no_errors	HAS1	HGNC	ENSG00000105509				16	0	0	6	5	45.4545
FPR2	0	genome.wustl.edu	37	19	52272458	52272458	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	52272458	52272458	T	C	SNP	FPR2	ENST00000340023	human	ensembl	74_37	+1	known	missense	c.547	p.W183R	0.938	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt,prints_DEZorph_rcpt	-	no_errors	FPR2	HGNC	ENSG00000171049				129	0	0	58	37	38.9474
ZNF845	0	genome.wustl.edu	37	19	53855384	53855384	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	53855384	53855384	C	T	SNP	ZNF845	ENST00000458035	human	ensembl	74_37	+1	known	missense	c.1456	p.R486C	0.382	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF845	HGNC	ENSG00000213799				75	0	0	31	60	65.9341
NLRP12	0	genome.wustl.edu	37	19	54313274	54313274	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	54313274	54313274	C	T	SNP	NLRP12	ENST00000324134	human	ensembl	74_37	-1	known	missense	c.1639	p.E547K	0.006	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP12	HGNC	ENSG00000142405				157	0	0	153	9	5.55556
LOC101928780	0	genome.wustl.edu	37	19	54627018	54627018	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	54627018	54627018	C	T	SNP	LOC101928780	ENST00000452097	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC012314.8	Clone_based_vega_gene	ENSG00000237017				20	0	0	19	16	45.7143
LILRA4	0	genome.wustl.edu	37	19	54849400	54849400	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	54849400	54849400	C	T	SNP	LILRA4	ENST00000291759	human	ensembl	74_37	-1	known	silent	c.462	p.L154	0.019	smart_Ig_sub,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA4	HGNC	ENSG00000239961				59	0	0	29	19	39.5833
KIR3DL2	0	genome.wustl.edu	37	19	55378013	55378013	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	55378013	55378013	G	A	SNP	KIR3DL2	ENST00000326321	human	ensembl	74_37	+1	known	missense	c.1195	p.A399T	0.005	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR3DL2	HGNC	ENSG00000240403				297	1	0.33557	232	117	33.5244
SUV420H2	0	genome.wustl.edu	37	19	55856021	55856021	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	55856021	55856021	C	T	SNP	SUV420H2	ENST00000402499	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SUV420H2	HGNC	ENSG00000133247				11	0	0	12	9	42.8571
EPN1	0	genome.wustl.edu	37	19	56203330	56203330	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	56203330	56203330	G	A	SNP	EPN1	ENST00000411543	human	ensembl	74_37	+1	known	missense	c.1231	p.A411T	0.529	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN1	HGNC	ENSG00000063245				11	0	0	16	4	20
ZNF416	0	genome.wustl.edu	37	19	58084689	58084689	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	58084689	58084689	A	G	SNP	ZNF416	ENST00000196489	human	ensembl	74_37	-1	known	missense	c.583	p.Y195H	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF416	HGNC	ENSG00000083817				92	0	0	55	43	43.8776
ZNF671	0	genome.wustl.edu	37	19	58238780	58238780	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	58238780	58238780	C	T	SNP	ZNF671	ENST00000317398	human	ensembl	74_37	-1	known	silent	c.117	p.A39	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF671	HGNC	ENSG00000083814				24	0	0	7	31	81.5789
TRIM28	0	genome.wustl.edu	37	19	59061548	59061548	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	59061548	59061548	T	C	SNP	TRIM28	ENST00000253024	human	ensembl	74_37	+1	known	missense	c.2228	p.I743T	0.999	superfamily_Bromodomain,smart_Bromodomain	pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	TRIM28	HGNC	ENSG00000130726				57	0	0	45	18	28.5714
PRSS57	0	genome.wustl.edu	37	19	694872	694872	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	694872	694872	C	T	SNP	PRSS57	ENST00000329267	human	ensembl	74_37	-1	known	missense	c.178	p.G60R	0.995	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS57	HGNC	ENSG00000185198				22	0	0	12	5	29.4118
XAB2	0	genome.wustl.edu	37	19	7692180	7692180	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	7692180	7692180	G	A	SNP	XAB2	ENST00000358368	human	ensembl	74_37	-1	known	silent	c.471	p.R157	0.944	smart_HAT	smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	XAB2	HGNC	ENSG00000076924				54	0	0	44	13	22.807
LRRC8E	0	genome.wustl.edu	37	19	7963908	7963908	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	7963908	7963908	C	T	SNP	LRRC8E	ENST00000306708	human	ensembl	74_37	+1	known	silent	c.501	p.S167	0.002	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8E	HGNC	ENSG00000171017				151	0	0	82	47	36.4341
LPPR3	0	genome.wustl.edu	37	19	813534	813534	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	813534	813534	G	A	SNP	LPPR3	ENST00000359894	human	ensembl	74_37	-1	known	missense	c.1277	p.P426L	0.994	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR3	Uniprot_gn	ENSG00000129951				10	0	0	6	7	53.8462
ADAMTS10	0	genome.wustl.edu	37	19	8666009	8666009	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	8666009	8666009	G	A	SNP	ADAMTS10	ENST00000270328	human	ensembl	74_37	-1	known	missense	c.613	p.R205W	0.982	NULL	pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS10	HGNC	ENSG00000142303				55	0	0	40	21	34.4262
MUC16	0	genome.wustl.edu	37	19	9016990	9016990	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	9016990	9016990	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.38005	p.T12669A	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				66	0	0	70	4	5.40541
MUC16	0	genome.wustl.edu	37	19	9049263	9049263	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	9049263	9049263	A	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.32368	p.S10790T	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				142	0	0	99	48	32.6531
UXS1	0	genome.wustl.edu	37	2	106761649	106761649	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	106761649	106761649	C	T	SNP	UXS1	ENST00000283148	human	ensembl	74_37	-1	known	missense	c.469	p.E157K	1.000	pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct,pfam_Male_sterile_NAD-bd,pfam_3Beta_OHSteriod_DH/Estase	pfam_Epimerase_deHydtase,pfam_UXS1_N,pfam_dTDP_dehydrorham_reduct,pfam_Male_sterile_NAD-bd,pfam_3Beta_OHSteriod_DH/Estase	-	no_errors	UXS1	HGNC	ENSG00000115652				49	0	0	37	14	27.451
ENSG00000273471	0	genome.wustl.edu	37	2	111144370	111144370	+	RNA	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	111144370	111144370	T	C	SNP	ENSG00000273471	ENST00000488671	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	RP13-1039J1.4	Clone_based_vega_gene	ENSG00000273471				10	0	0	7	4	36.3636
STEAP3	0	genome.wustl.edu	37	2	120005698	120005698	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	120005698	120005698	C	T	SNP	STEAP3	ENST00000393110	human	ensembl	74_37	+1	known	silent	c.966	p.C322	1.000	pfam_Fe3_Rdtase_TM_dom	pfam_Fe3_Rdtase_TM_dom	-	no_errors	STEAP3	HGNC	ENSG00000115107				57	0	0	37	24	39.3443
GLI2	0	genome.wustl.edu	37	2	121740422	121740422	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	121740422	121740422	G	A	SNP	GLI2	ENST00000361492	human	ensembl	74_37	+1	known	missense	c.1649	p.R550H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047				101	0	0	91	47	34.058
GLI2	0	genome.wustl.edu	37	2	121743883	121743883	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	121743883	121743883	G	A	SNP	GLI2	ENST00000361492	human	ensembl	74_37	+1	known	silent	c.1986	p.S662	0.014	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047				54	0	0	45	4	8.16327
CLASP1	0	genome.wustl.edu	37	2	122165239	122165239	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	122165239	122165239	T	C	SNP	CLASP1	ENST00000263710	human	ensembl	74_37	-1	known	missense	c.2477	p.D826G	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP1	HGNC	ENSG00000074054				114	0	0	102	49	32.4503
BIN1	0	genome.wustl.edu	37	2	127808729	127808729	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	127808729	127808729	C	T	SNP	BIN1	ENST00000316724	human	ensembl	74_37	-1	known	splice_site	c.1461+1	e16+1	1.000	-	-	-	no_errors	BIN1	HGNC	ENSG00000136717				87	0	0	49	23	31.9444
BIN1	0	genome.wustl.edu	37	2	127828152	127828152	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	127828152	127828152	C	A	SNP	BIN1	ENST00000316724	human	ensembl	74_37	-1	known	missense	c.292	p.D98Y	1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom,prints_Amphiphysin	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_Amphiphysin,prints_Amphiphysin_2,prints_SH3_domain	-	no_errors	BIN1	HGNC	ENSG00000136717				176	0	0	106	56	34.5679
HS6ST1	0	genome.wustl.edu	37	2	129075996	129075996	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	129075996	129075996	G	C	SNP	HS6ST1	ENST00000259241	human	ensembl	74_37	-1	known	missense	c.142	p.R48G	1.000	NULL	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST1	HGNC	ENSG00000136720				20	0	0	24	7	22.5806
IMP4	0	genome.wustl.edu	37	2	131103230	131103230	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	131103230	131103230	G	A	SNP	IMP4	ENST00000259239	human	ensembl	74_37	+1	known	missense	c.397	p.V133I	1.000	pfam_Brix,superfamily_Anticodon-bd,smart_Brix,pfscan_Brix	pfam_Brix,superfamily_Anticodon-bd,smart_Brix,pfscan_Brix	-	no_errors	IMP4	HGNC	ENSG00000136718				54	0	0	51	26	33.7662
LCT	0	genome.wustl.edu	37	2	136548299	136548299	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	136548299	136548299	C	T	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	missense	c.5264	p.R1755Q	0.940	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850				60	0	0	34	17	33.3333
LCT	0	genome.wustl.edu	37	2	136567157	136567157	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	136567157	136567157	G	A	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	silent	c.2760	p.G920	0.992	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850				92	0	0	56	22	28.2051
LCT	0	genome.wustl.edu	37	2	136594315	136594315	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	136594315	136594315	C	T	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	missense	c.425	p.R142Q	0.002	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850				61	0	0	49	25	33.7838
LRP1B	0	genome.wustl.edu	37	2	141773397	141773397	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	141773397	141773397	C	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.2058	p.R686	0.990	pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				102	0	0	52	32	38.0952
NEB	0	genome.wustl.edu	37	2	152342438	152342438	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	152342438	152342438	G	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.25414	p.R8472C	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				49	0	0	75	4	5.06329
NEB	0	genome.wustl.edu	37	2	152426860	152426860	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	152426860	152426860	C	T	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.17165	p.G5722D	1.000	smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				36	0	0	15	9	37.5
NBAS	0	genome.wustl.edu	37	2	15326941	15326941	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	15326941	15326941	G	T	SNP	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	missense	c.6636	p.N2212K	1.000	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779				119	0	0	41	24	36.9231
PKP4	0	genome.wustl.edu	37	2	159481624	159481624	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	159481624	159481624	G	A	SNP	PKP4	ENST00000389759	human	ensembl	74_37	+1	known	missense	c.838	p.A280T	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP4	HGNC	ENSG00000144283				49	0	0	46	25	35.2113
IFIH1	0	genome.wustl.edu	37	2	163138979	163138979	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	163138979	163138979	T	C	SNP	IFIH1	ENST00000263642	human	ensembl	74_37	-1	known	silent	c.1203	p.P401	0.862	pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_CARD,superfamily_P-loop_NTPase,superfamily_DEATH-like_dom,superfamily_ARM-type_fold,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	IFIH1	HGNC	ENSG00000115267				64	0	0	33	19	36.5385
GALNT3	0	genome.wustl.edu	37	2	166606314	166606314	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	166606314	166606314	C	T	SNP	GALNT3	ENST00000392701	human	ensembl	74_37	-1	known	missense	c.1717	p.A573T	0.967	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT3	HGNC	ENSG00000115339				218	0	0	111	24	17.7778
SCN1A	0	genome.wustl.edu	37	2	166848219	166848219	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	166848219	166848219	T	C	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	missense	c.5566	p.M1856V	1.000	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285				124	0	0	112	49	30.4348
LRP2	0	genome.wustl.edu	37	2	170097611	170097611	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	170097611	170097611	C	T	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.3932	p.R1311H	0.967	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				103	0	0	89	8	8.24742
CCDC173	0	genome.wustl.edu	37	2	170537614	170537614	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	170537614	170537614	G	T	SNP	CCDC173	ENST00000447353	human	ensembl	74_37	-1	known	missense	c.197	p.T66K	0.998	NULL	NULL	-	no_errors	CCDC173	HGNC	ENSG00000154479				125	0	0	62	22	26.1905
TLK1	0	genome.wustl.edu	37	2	171867901	171867901	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	171867901	171867901	G	A	SNP	TLK1	ENST00000431350	human	ensembl	74_37	-1	known	silent	c.1398	p.G466	0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TLK1	HGNC	ENSG00000198586				75	0	0	28	11	28.2051
HOXD13	0	genome.wustl.edu	37	2	176958274	176958274	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	176958274	176958274	G	A	SNP	HOXD13	ENST00000392539	human	ensembl	74_37	+1	putative	missense	c.656	p.R219Q	1.000	NULL	pfam_Homeobox_dom,pfam_HoxA13_N,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOXD13	HGNC	ENSG00000128714				123	0	0	90	45	33.3333
HOXD13	0	genome.wustl.edu	37	2	176959377	176959377	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	176959377	176959377	G	T	SNP	HOXD13	ENST00000392539	human	ensembl	74_37	+1	putative	missense	c.951	p.E317D	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_HoxA13_N,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOXD13	HGNC	ENSG00000128714				77	0	0	35	15	30
HOXD10	0	genome.wustl.edu	37	2	176973578	176973578	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	176973578	176973578	C	T	SNP	HOXD10	ENST00000490088	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.133	-	-	-	no_errors	HOXD10	HGNC	ENSG00000128710				9	0	0	5	9	64.2857
VSNL1	0	genome.wustl.edu	37	2	17773346	17773346	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	17773346	17773346	G	T	SNP	VSNL1	ENST00000295156	human	ensembl	74_37	+1	known	missense	c.5	p.G2V	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	VSNL1	HGNC	ENSG00000163032				103	0	0	51	26	33.7662
TTN	0	genome.wustl.edu	37	2	179395823	179395823	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	179395823	179395823	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.97815	p.A32605	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				277	0	0	210	54	20.4545
TTN	0	genome.wustl.edu	37	2	179414508	179414508	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	179414508	179414508	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.84237	p.D28079	0.209	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				86	0	0	49	32	39.5062
TTN	0	genome.wustl.edu	37	2	179427631	179427631	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	179427631	179427631	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.75524	p.R25175Q	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				44	0	0	18	6	25
TTN	0	genome.wustl.edu	37	2	179436307	179436307	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	179436307	179436307	G	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.66848	p.T22283S	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				29	0	0	16	11	40.7407
TTN	0	genome.wustl.edu	37	2	179584466	179584466	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	179584466	179584466	A	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.20021	p.L6674P	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				76	0	0	32	30	48.3871
TTN	0	genome.wustl.edu	37	2	179596254	179596254	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	179596254	179596254	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.13507	p.A4503T	0.997	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				41	0	0	37	12	24.4898
PDE1A	0	genome.wustl.edu	37	2	183095853	183095853	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	183095853	183095853	A	G	SNP	PDE1A	ENST00000456212	human	ensembl	74_37	-1	known	silent	c.471	p.V157	1.000	NULL	pfam_PDEase_catalytic_dom,pfam_PDEase_N,superfamily_GRIP,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1A	HGNC	ENSG00000115252				124	0	0	42	25	37.3134
COL3A1	0	genome.wustl.edu	37	2	189875616	189875616	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	189875616	189875616	G	A	SNP	COL3A1	ENST00000304636	human	ensembl	74_37	+1	known	silent	c.4254	p.T1418	1.000	pfam_Fib_collagen_C,smart_Fib_collagen_C	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL3A1	HGNC	ENSG00000168542				144	0	0	75	26	25.7426
SLC39A10	0	genome.wustl.edu	37	2	196571395	196571395	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	196571395	196571395	C	T	SNP	SLC39A10	ENST00000359634	human	ensembl	74_37	+1	known	silent	c.1272	p.G424	0.970	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A10	HGNC	ENSG00000196950				60	0	0	19	13	40.625
HECW2	0	genome.wustl.edu	37	2	197183693	197183693	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	197183693	197183693	C	T	SNP	HECW2	ENST00000260983	human	ensembl	74_37	-1	known	missense	c.1921	p.A641T	0.240	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW2	HGNC	ENSG00000138411				37	0	0	62	23	27.0588
SPATS2L	0	genome.wustl.edu	37	2	201342742	201342742	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	201342742	201342742	G	A	SNP	SPATS2L	ENST00000409755	human	ensembl	74_37	+1	known	silent	c.1755	p.T585	0.794	NULL	pfam_DUF1387,superfamily_UBA-like	-	no_errors	SPATS2L	HGNC	ENSG00000196141				46	0	0	50	10	16.6667
KCTD18	0	genome.wustl.edu	37	2	201362558	201362558	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	201362558	201362558	A	T	SNP	KCTD18	ENST00000359878	human	ensembl	74_37	-1	known	missense	c.579	p.N193K	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold	-	no_errors	KCTD18	HGNC	ENSG00000155729				177	0	0	52	38	42.2222
BZW1	0	genome.wustl.edu	37	2	201683003	201683003	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	201683003	201683003	G	A	SNP	BZW1	ENST00000409600	human	ensembl	74_37	+1	known	missense	c.706	p.A236T	1.000	NULL	pfam_W2_domain,superfamily_ARM-type_fold,smart_W2_domain	-	no_errors	BZW1	HGNC	ENSG00000082153				21	0	0	6	7	53.8462
STRADB	0	genome.wustl.edu	37	2	202337717	202337717	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	202337717	202337717	G	A	SNP	STRADB	ENST00000194530	human	ensembl	74_37	+1	known	missense	c.233	p.R78Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STRADB	HGNC	ENSG00000082146				161	1	0.617284	64	38	37.2549
FZD7	0	genome.wustl.edu	37	2	202900121	202900121	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	202900121	202900121	C	T	SNP	FZD7	ENST00000286201	human	ensembl	74_37	+1	known	missense	c.751	p.R251C	1.000	pfam_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD7	HGNC	ENSG00000155760				121	0	0	69	30	30.303
FZD7	0	genome.wustl.edu	37	2	202900156	202900156	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	202900156	202900156	G	A	SNP	FZD7	ENST00000286201	human	ensembl	74_37	+1	known	silent	c.786	p.V262	1.000	pfam_Frizzled,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD7	HGNC	ENSG00000155760				234	0	0	144	73	33.6406
CD28	0	genome.wustl.edu	37	2	204571310	204571310	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	204571310	204571310	G	A	SNP	CD28	ENST00000458610	human	ensembl	74_37	+1	putative	missense	c.64	p.V22M	0.000	NULL	pfam_Ig_V-set,smart_Ig_V-set_subgr,prints_CD28	-	no_errors	CD28	HGNC	ENSG00000178562				12	0	0	12	4	25
FZD5	0	genome.wustl.edu	37	2	208631836	208631836	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	208631836	208631836	C	T	SNP	FZD5	ENST00000295417	human	ensembl	74_37	-1	known	missense	c.1628	p.R543H	1.000	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD5	HGNC	ENSG00000163251				11	0	0	11	6	35.2941
SMARCAL1	0	genome.wustl.edu	37	2	217315719	217315719	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	217315719	217315719	C	T	SNP	SMARCAL1	ENST00000357276	human	ensembl	74_37	+1	known	missense	c.2002	p.R668W	0.889	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_HARP_dom,pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAL1	HGNC	ENSG00000138375				79	0	0	51	30	37.037
VIL1	0	genome.wustl.edu	37	2	219301941	219301941	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	219301941	219301941	G	A	SNP	VIL1	ENST00000248444	human	ensembl	74_37	+1	known	missense	c.2066	p.R689H	0.999	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VIL1	HGNC	ENSG00000127831				147	0	0	70	69	49.6403
PLCD4	0	genome.wustl.edu	37	2	219492818	219492818	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	219492818	219492818	T	C	SNP	PLCD4	ENST00000417849	human	ensembl	74_37	+1	known	missense	c.839	p.I280T	1.000	pfam_PLipase_C_EF-hand-like	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCD4	HGNC	ENSG00000115556				109	0	0	70	35	33.3333
CCDC108	0	genome.wustl.edu	37	2	219893036	219893036	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	219893036	219893036	G	A	SNP	CCDC108	ENST00000341552	human	ensembl	74_37	-1	known	missense	c.1738	p.R580C	0.968	NULL	superfamily_PapD-like,pfscan_MSP_dom	-	no_errors	CCDC108	HGNC	ENSG00000181378				130	0	0	82	45	35.4331
CCDC108	0	genome.wustl.edu	37	2	219894817	219894817	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	219894817	219894817	C	T	SNP	CCDC108	ENST00000341552	human	ensembl	74_37	-1	known	silent	c.1275	p.S425	0.000	NULL	superfamily_PapD-like,pfscan_MSP_dom	-	no_errors	CCDC108	HGNC	ENSG00000181378				105	0	0	61	29	32.2222
GLB1L	0	genome.wustl.edu	37	2	220104675	220104675	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	220104675	220104675	G	A	SNP	GLB1L	ENST00000295759	human	ensembl	74_37	-1	known	missense	c.688	p.R230W	0.986	pfam_Glycoside_Hdrlase_35,superfamily_Glycoside_hydrolase_SF	pfam_Glycoside_Hdrlase_35,pfam_Glyco_hydro_42_N,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,prints_Glycoside_Hdrlase_35	-	no_errors	GLB1L	HGNC	ENSG00000163521				206	1	0.483092	151	70	31.6742
DNAJB2	0	genome.wustl.edu	37	2	220147591	220147591	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	220147591	220147591	C	T	SNP	DNAJB2	ENST00000336576	human	ensembl	74_37	+1	known	missense	c.385	p.R129W	0.345	NULL	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB2	HGNC	ENSG00000135924				115	0	0	59	27	31.3953
OBSL1	0	genome.wustl.edu	37	2	220419341	220419341	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	220419341	220419341	T	C	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	silent	c.4731	p.V1577	0.996	smart_Ig_sub	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006				33	0	0	25	12	32.4324
OBSL1	0	genome.wustl.edu	37	2	220431817	220431817	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	220431817	220431817	C	A	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.1869	p.E623D	0.977	smart_Ig_sub	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006				36	0	0	17	10	37.037
OBSL1	0	genome.wustl.edu	37	2	220433041	220433041	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	220433041	220433041	G	A	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.1018	p.R340C	1.000	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006				15	0	0	8	6	42.8571
COL4A3	0	genome.wustl.edu	37	2	228155478	228155478	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	228155478	228155478	G	A	SNP	COL4A3	ENST00000396578	human	ensembl	74_37	+1	known	missense	c.3086	p.R1029K	0.000	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A3	HGNC	ENSG00000169031				69	0	0	26	9	25.7143
SPHKAP	0	genome.wustl.edu	37	2	228883795	228883795	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	228883795	228883795	G	T	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.1775	p.A592E	0.977	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820				89	0	0	70	32	31.3725
SP100	0	genome.wustl.edu	37	2	231307780	231307780	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	231307780	231307780	G	A	SNP	SP100	ENST00000340126	human	ensembl	74_37	+1	known	missense	c.236	p.R79H	0.921	pfam_Sp100	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP100	HGNC	ENSG00000067066				109	0	0	42	30	41.6667
NCL	0	genome.wustl.edu	37	2	232326264	232326264	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	232326264	232326264	G	A	SNP	NCL	ENST00000322723	human	ensembl	74_37	-1	known	silent	c.600	p.D200	0.000	NULL	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom	-	no_errors	NCL	HGNC	ENSG00000115053				94	0	0	66	33	33.3333
ALPP	0	genome.wustl.edu	37	2	233246288	233246288	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	233246288	233246288	G	A	SNP	ALPP	ENST00000392027	human	ensembl	74_37	+1	known	missense	c.1391	p.R464H	0.988	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPP	HGNC	ENSG00000163283				28	0	0	27	18	40
SAG	0	genome.wustl.edu	37	2	234247347	234247347	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	234247347	234247347	G	A	SNP	SAG	ENST00000409110	human	ensembl	74_37	+1	known	missense	c.970	p.V324I	0.908	pfam_Arrestin_C-like,superfamily_Ig_E-set	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set,prints_Arrestin	-	no_errors	SAG	HGNC	ENSG00000130561				149	0	0	69	39	36.1111
USP40	0	genome.wustl.edu	37	2	234398032	234398032	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	234398032	234398032	C	T	SNP	USP40	ENST00000450966	human	ensembl	74_37	-1	known	missense	c.3143	p.R1048Q	0.752	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP40	HGNC	ENSG00000085982				14	0	0	8	9	52.9412
USP40	0	genome.wustl.edu	37	2	234442369	234442369	+	Silent	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	234442369	234442369	A	T	SNP	USP40	ENST00000450966	human	ensembl	74_37	-1	known	silent	c.1260	p.R420	0.071	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP40	HGNC	ENSG00000085982				30	0	0	15	10	40
LOC100286922	0	genome.wustl.edu	37	2	234663740	234663740	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	234663740	234663740	G	A	SNP	LOC100286922	ENST00000389816	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	AC114812.5	Clone_based_vega_gene	ENSG00000178836				126	0	0	129	47	26.7045
MSL3P1	0	genome.wustl.edu	37	2	234775895	234775895	+	RNA	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	234775895	234775895	T	C	SNP	MSL3P1	ENST00000438684	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MSL3P1	HGNC	ENSG00000224287				25	0	0	17	8	32
GBX2	0	genome.wustl.edu	37	2	237074648	237074648	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	237074648	237074648	C	T	SNP	GBX2	ENST00000306318	human	ensembl	74_37	-1	known	missense	c.956	p.R319Q	0.999	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	GBX2	HGNC	ENSG00000168505				143	0	0	122	11	8.27068
COL6A3	0	genome.wustl.edu	37	2	238277429	238277429	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	238277429	238277429	G	A	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	silent	c.4677	p.F1559	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				162	0	0	77	60	43.7956
ILKAP	0	genome.wustl.edu	37	2	239102960	239102960	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	239102960	239102960	G	T	SNP	ILKAP	ENST00000254654	human	ensembl	74_37	-1	known	missense	c.134	p.P45H	1.000	NULL	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	ILKAP	HGNC	ENSG00000132323				55	0	0	27	20	42.5532
GPC1	0	genome.wustl.edu	37	2	241404611	241404611	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	241404611	241404611	G	A	SNP	GPC1	ENST00000264039	human	ensembl	74_37	+1	known	missense	c.1252	p.G418R	0.541	pfam_Glypican	pfam_Glypican	-	no_errors	GPC1	HGNC	ENSG00000063660				23	0	0	20	7	25.9259
FARP2	0	genome.wustl.edu	37	2	242432735	242432735	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	242432735	242432735	C	T	SNP	FARP2	ENST00000264042	human	ensembl	74_37	+1	known	silent	c.2923	p.L975	0.986	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_FERM-adjacent,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP2	HGNC	ENSG00000006607				51	0	0	43	26	37.6812
ITSN2	0	genome.wustl.edu	37	2	24426495	24426495	+	Nonstop_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	24426495	24426495	C	A	SNP	ITSN2	ENST00000355123	human	ensembl	74_37	-1	known	nonstop	c.5094	p.*1698Y	0.083	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,pfam_C2_dom,superfamily_DH-domain,superfamily_C2_dom,superfamily_SH3_domain,smart_EPS15_homology,smart_EF_hand_dom,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_p67phox	-	no_errors	ITSN2	HGNC	ENSG00000198399				19	0	0	13	9	40.9091
POMC	0	genome.wustl.edu	37	2	25384074	25384074	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	25384074	25384074	C	T	SNP	POMC	ENST00000264708	human	ensembl	74_37	-1	known	missense	c.680	p.R227H	1.000	prints_Mcortin_ACTH	pfam_Mcrtin_ACTH_cent,pfam_Melanocortin_N,pfam_Opioid_neuropept,prints_Mcortin_ACTH	-	no_errors	POMC	HGNC	ENSG00000115138				47	0	0	42	16	27.5862
HADHB	0	genome.wustl.edu	37	2	26499963	26499963	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	26499963	26499963	C	T	SNP	HADHB	ENST00000317799	human	ensembl	74_37	+1	known	missense	c.377	p.S126F	1.000	pfam_Thiolase_N,superfamily_Thiolase-like,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,pfam_Ketoacyl_synth_N,superfamily_Thiolase-like,tigrfam_Thiolase	-	no_errors	HADHB	HGNC	ENSG00000138029				61	0	0	35	23	39.6552
EMILIN1	0	genome.wustl.edu	37	2	27306197	27306197	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	27306197	27306197	C	T	SNP	EMILIN1	ENST00000380320	human	ensembl	74_37	+1	known	silent	c.1758	p.G586	0.000	NULL	pfam_EMI_domain,pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	EMILIN1	HGNC	ENSG00000138080				79	0	0	67	30	30.9278
CAD	0	genome.wustl.edu	37	2	27461393	27461393	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	27461393	27461393	G	A	SNP	CAD	ENST00000264705	human	ensembl	74_37	+1	known	missense	c.4955	p.R1652H	0.973	NULL	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774				141	0	0	118	71	37.5661
YPEL5	0	genome.wustl.edu	37	2	30379581	30379581	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	30379581	30379581	A	G	SNP	YPEL5	ENST00000261353	human	ensembl	74_37	+1	known	missense	c.64	p.T22A	1.000	pfam_Yippee/Mis18	pfam_Yippee/Mis18	-	no_errors	YPEL5	HGNC	ENSG00000119801				132	0	0	100	6	5.66038
RNU6-1117P	0	genome.wustl.edu	37	2	35696774	35696774	+	RNA	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	35696774	35696774	T	C	SNP	RNU6-1117P	ENST00000384525	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.034	-	-	-	no_errors	RNU6-1117P	HGNC	ENSG00000207255				21	0	0	13	3	18.75
SOS1	0	genome.wustl.edu	37	2	39213084	39213084	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	39213084	39213084	G	A	SNP	SOS1	ENST00000402219	human	ensembl	74_37	-1	known	nonsense	c.3883	p.R1295*	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	SOS1	HGNC	ENSG00000115904				234	0	0	123	78	38.806
LRPPRC	0	genome.wustl.edu	37	2	44139614	44139614	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	44139614	44139614	T	C	SNP	LRPPRC	ENST00000260665	human	ensembl	74_37	-1	known	missense	c.3232	p.M1078V	0.015	NULL	pfam_Pentatricopeptide_repeat,tigrfam_Pentatricopeptide_repeat	-	no_errors	LRPPRC	HGNC	ENSG00000138095				78	0	0	39	4	9.30233
PREPL	0	genome.wustl.edu	37	2	44569598	44569598	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	44569598	44569598	T	C	SNP	PREPL	ENST00000260648	human	ensembl	74_37	-1	known	missense	c.710	p.D237G	0.998	pfam_Pept_S9A_N	pfam_Peptidase_S9,pfam_Pept_S9A_N,prints_Peptidase_S9A	-	no_errors	PREPL	HGNC	ENSG00000138078				120	0	0	55	29	34.5238
NRXN1	0	genome.wustl.edu	37	2	51254743	51254743	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	51254743	51254743	G	A	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	silent	c.669	p.G223	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				16	0	0	17	4	19.0476
NRXN1	0	genome.wustl.edu	37	2	51254815	51254815	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	51254815	51254815	G	A	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	silent	c.597	p.S199	0.979	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				18	0	0	15	12	44.4444
BCL11A	0	genome.wustl.edu	37	2	60689540	60689540	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	60689540	60689540	G	A	SNP	BCL11A	ENST00000335712	human	ensembl	74_37	-1	known	silent	c.507	p.S169	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11A	HGNC	ENSG00000119866				83	0	0	42	19	31.1475
CNRIP1	0	genome.wustl.edu	37	2	68521133	68521133	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	68521133	68521133	G	A	SNP	CNRIP1	ENST00000263655	human	ensembl	74_37	-1	known	missense	c.356	p.T119I	1.000	NULL	NULL	-	no_errors	CNRIP1	HGNC	ENSG00000119865				60	0	0	54	11	16.9231
DQX1	0	genome.wustl.edu	37	2	74750442	74750442	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	74750442	74750442	G	A	SNP	DQX1	ENST00000393951	human	ensembl	74_37	-1	known	nonsense	c.1039	p.R347*	0.995	superfamily_P-loop_NTPase	pfam_Helicase-assoc_dom,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd	-	no_errors	DQX1	HGNC	ENSG00000144045				228	0	0	153	46	23.1156
LOXL3	0	genome.wustl.edu	37	2	74762732	74762732	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	74762732	74762732	C	T	SNP	LOXL3	ENST00000264094	human	ensembl	74_37	-1	known	missense	c.1399	p.A467T	1.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_Lysyl_oxidase,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_Lysyl_oxidase,prints_SRCR	-	no_errors	LOXL3	HGNC	ENSG00000115318				302	0	0	227	33	12.6923
LRRTM1	0	genome.wustl.edu	37	2	80529622	80529622	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	80529622	80529622	G	A	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	silent	c.1323	p.I441	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951				89	0	0	54	40	42.5532
ADRA2B	0	genome.wustl.edu	37	2	96781701	96781701	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	96781701	96781701	G	A	SNP	ADRA2B	ENST00000409345	human	ensembl	74_37	-1	known	missense	c.188	p.T63M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA2B_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam	-	no_errors	ADRA2B	HGNC	ENSG00000222040				49	0	0	40	5	11.1111
ZAP70	0	genome.wustl.edu	37	2	98351712	98351712	+	Splice_Site	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	98351712	98351712	G	T	SNP	ZAP70	ENST00000264972	human	ensembl	74_37	+1	known	splice_site	c.1083-1	e8-1	1.000	-	-	-	no_errors	ZAP70	HGNC	ENSG00000115085				65	0	0	71	32	31.068
TMEM131	0	genome.wustl.edu	37	2	98392356	98392356	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	98392356	98392356	A	T	SNP	TMEM131	ENST00000186436	human	ensembl	74_37	-1	known	missense	c.4270	p.S1424T	1.000	NULL	pfam_DUF3651_TMEM131	-	no_errors	TMEM131	HGNC	ENSG00000075568				45	0	0	27	10	27.027
DTD1	0	genome.wustl.edu	37	20	18724832	18724832	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	18724832	18724832	G	A	SNP	DTD1	ENST00000377452	human	ensembl	74_37	+1	known	missense	c.566	p.R189Q	0.904	NULL	pfam_DTyrtRNA_deacyls,superfamily_DTD-like_dom,tigrfam_DTyrtRNA_deacyls	-	no_errors	DTD1	HGNC	ENSG00000125821				68	0	0	28	8	22.2222
CST7	0	genome.wustl.edu	37	20	24930099	24930099	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	24930099	24930099	C	T	SNP	CST7	ENST00000376835	human	ensembl	74_37	+1	known	silent	c.24	p.H8	0.000	NULL	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST7	HGNC	ENSG00000077984				91	0	0	100	38	27.5362
XKR7	0	genome.wustl.edu	37	20	30584330	30584330	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	30584330	30584330	C	T	SNP	XKR7	ENST00000562532	human	ensembl	74_37	+1	known	silent	c.810	p.L270	0.990	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR7	HGNC	ENSG00000260903				26	0	0	31	7	18.4211
BPIFB2	0	genome.wustl.edu	37	20	31604906	31604906	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	31604906	31604906	T	G	SNP	BPIFB2	ENST00000170150	human	ensembl	74_37	+1	known	missense	c.575	p.I192S	0.963	superfamily_Bactericidal_perm-incr_a/b_dom	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB2	HGNC	ENSG00000078898				144	0	0	92	37	28.6822
BPIFB2	0	genome.wustl.edu	37	20	31609117	31609117	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	31609117	31609117	G	A	SNP	BPIFB2	ENST00000170150	human	ensembl	74_37	+1	known	missense	c.1225	p.V409I	0.218	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB2	HGNC	ENSG00000078898				28	0	0	28	13	31.7073
C20orf194	0	genome.wustl.edu	37	20	3276350	3276350	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	3276350	3276350	G	A	SNP	C20orf194	ENST00000498079	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C20orf194	HGNC	ENSG00000088854				29	0	0	15	4	21.0526
NCOA6	0	genome.wustl.edu	37	20	33330514	33330514	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	33330514	33330514	C	T	SNP	NCOA6	ENST00000359003	human	ensembl	74_37	-1	known	silent	c.3546	p.Q1182	1.000	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646				94	0	0	52	38	42.2222
TGM2	0	genome.wustl.edu	37	20	36766704	36766704	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	36766704	36766704	G	A	SNP	TGM2	ENST00000361475	human	ensembl	74_37	-1	known	missense	c.1426	p.R476W	0.887	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM2	HGNC	ENSG00000198959				71	0	0	35	20	36.3636
RALGAPB	0	genome.wustl.edu	37	20	37121578	37121578	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	37121578	37121578	A	G	SNP	RALGAPB	ENST00000262879	human	ensembl	74_37	+1	known	silent	c.192	p.K64	1.000	NULL	superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPB	HGNC	ENSG00000170471				171	0	0	83	25	23.1481
MAVS	0	genome.wustl.edu	37	20	3845148	3845148	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	3845148	3845148	G	A	SNP	MAVS	ENST00000428216	human	ensembl	74_37	+1	known	missense	c.871	p.A291T	0.000	NULL	NULL	-	no_errors	MAVS	HGNC	ENSG00000088888				80	0	0	79	31	28.1818
ACOT8	0	genome.wustl.edu	37	20	44472189	44472189	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	44472189	44472189	T	C	SNP	ACOT8	ENST00000217455	human	ensembl	74_37	-1	known	missense	c.818	p.Y273C	1.000	pfam_Acyl_CoA_thio_II_dom,tigrfam_Acyl_CoA_thio	pfam_Acyl_CoA_thio_II_dom,tigrfam_Acyl_CoA_thio	-	no_errors	ACOT8	HGNC	ENSG00000101473				35	0	0	20	13	39.3939
ACOT8	0	genome.wustl.edu	37	20	44472920	44472920	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	44472920	44472920	G	A	SNP	ACOT8	ENST00000217455	human	ensembl	74_37	-1	known	nonsense	c.628	p.R210*	1.000	pfam_Acyl_CoA_thio_II_dom,tigrfam_Acyl_CoA_thio	pfam_Acyl_CoA_thio_II_dom,tigrfam_Acyl_CoA_thio	-	no_errors	ACOT8	HGNC	ENSG00000101473				65	0	0	38	20	34.4828
ZMYND8	0	genome.wustl.edu	37	20	45878153	45878153	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	45878153	45878153	T	A	SNP	ZMYND8	ENST00000536340	human	ensembl	74_37	-1	known	missense	c.1673	p.E558V	1.000	pfam_DUF3544	pfam_DUF3544,pfam_Bromodomain,pfam_PWWP_dom,pfam_Znf_PHD-finger,pfam_Znf_MYND,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND8	HGNC	ENSG00000101040				90	0	0	37	28	43.0769
ARFGEF2	0	genome.wustl.edu	37	20	47567921	47567921	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	47567921	47567921	G	A	SNP	ARFGEF2	ENST00000371917	human	ensembl	74_37	+1	known	missense	c.338	p.R113Q	1.000	superfamily_ARM-type_fold	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF2	HGNC	ENSG00000124198				85	0	0	31	12	27.907
MOCS3	0	genome.wustl.edu	37	20	49575760	49575760	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	49575760	49575760	G	A	SNP	MOCS3	ENST00000244051	human	ensembl	74_37	+1	known	silent	c.381	p.L127	0.999	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB	pfam_ThiF_NAD_FAD-bd,pfam_MoeZ_MoeB,pfam_Rhodanese-like_dom,superfamily_Molybdenum_cofac_synth_MoeB,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	-	no_errors	MOCS3	HGNC	ENSG00000124217				135	0	0	96	61	38.8535
KCNG1	0	genome.wustl.edu	37	20	49620977	49620977	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	49620977	49620977	G	A	SNP	KCNG1	ENST00000371571	human	ensembl	74_37	-1	known	silent	c.1141	p.L381	1.000	pfam_Ion_trans_dom,prints_K_chnl,prints_K_chnl_volt-dep_Kv	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG1	HGNC	ENSG00000026559				30	0	0	14	15	51.7241
KCNG1	0	genome.wustl.edu	37	20	49626813	49626813	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	49626813	49626813	G	A	SNP	KCNG1	ENST00000371571	human	ensembl	74_37	-1	known	silent	c.63	p.D21	1.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG1	HGNC	ENSG00000026559				42	0	0	34	22	39.2857
MC3R	0	genome.wustl.edu	37	20	54824427	54824427	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	54824427	54824427	C	T	SNP	MC3R	ENST00000243911	human	ensembl	74_37	+1	known	silent	c.528	p.G176	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melcrt_ACTH_rcpt,prints_Mcort_3_rcpt,prints_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC3R	HGNC	ENSG00000124089				132	0	0	104	32	23.5294
FAM209A	0	genome.wustl.edu	37	20	55100860	55100860	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	55100860	55100860	G	T	SNP	FAM209A	ENST00000371328	human	ensembl	74_37	+1	known	nonsense	c.250	p.E84*	0.983	NULL	NULL	-	no_errors	FAM209A	HGNC	ENSG00000124103				247	0	0	129	49	27.5281
PPP1R3D	0	genome.wustl.edu	37	20	58514195	58514195	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	58514195	58514195	G	A	SNP	PPP1R3D	ENST00000370996	human	ensembl	74_37	-1	known	silent	c.792	p.A264	0.029	pfam_CBM_21,pirsf_Pase-1_Glycogen_target-su_met,pfscan_CBM_21	pfam_CBM_21,pirsf_Pase-1_Glycogen_target-su_met,pfscan_CBM_21	-	no_errors	PPP1R3D	HGNC	ENSG00000132825				44	0	0	29	14	32.5581
COL9A3	0	genome.wustl.edu	37	20	61458159	61458159	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	61458159	61458159	C	T	SNP	COL9A3	ENST00000343916	human	ensembl	74_37	+1	known	missense	c.779	p.A260V	0.417	NULL	pfam_Collagen	-	no_errors	COL9A3	HGNC	ENSG00000092758				43	0	0	31	15	32.6087
KCNQ2	0	genome.wustl.edu	37	20	62046407	62046407	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	62046407	62046407	C	T	SNP	KCNQ2	ENST00000354587	human	ensembl	74_37	-1	known	silent	c.1290	p.P430	0.367	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ2,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ2	HGNC	ENSG00000075043				73	0	0	46	19	29.2308
ZBTB46	0	genome.wustl.edu	37	20	62421442	62421442	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	62421442	62421442	G	A	SNP	ZBTB46	ENST00000245663	human	ensembl	74_37	-1	known	silent	c.669	p.Y223	0.107	NULL	pfam_BTB_POZ,pfam_DUF3342,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB46	HGNC	ENSG00000130584				54	0	0	25	27	51.9231
UCKL1	0	genome.wustl.edu	37	20	62571762	62571762	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	62571762	62571762	G	A	SNP	UCKL1	ENST00000354216	human	ensembl	74_37	-1	known	missense	c.1379	p.A460V	0.997	NULL	pfam_PRK/URK,pfam_CPT,superfamily_P-loop_NTPase,prints_Uridine_kinase,prints_PRK,tigrfam_Uridine_kinase	-	no_errors	UCKL1	HGNC	ENSG00000198276				51	0	0	30	16	34.7826
ZNF512B	0	genome.wustl.edu	37	20	62597958	62597958	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	62597958	62597958	C	A	SNP	ZNF512B	ENST00000217130	human	ensembl	74_37	-1	known	missense	c.570	p.K190N	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF512B	HGNC	ENSG00000196700				146	0	0	98	54	35.5263
ANGPT4	0	genome.wustl.edu	37	20	860413	860413	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	860413	860413	G	A	SNP	ANGPT4	ENST00000381922	human	ensembl	74_37	-1	known	missense	c.1030	p.R344W	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPT4	HGNC	ENSG00000101280				75	0	0	44	28	38.8889
ADAMTS1	0	genome.wustl.edu	37	21	28212612	28212612	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	28212612	28212612	C	T	SNP	ADAMTS1	ENST00000284984	human	ensembl	74_37	-1	known	missense	c.1648	p.D550N	1.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS1,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS1	HGNC	ENSG00000154734				104	0	0	38	23	37.7049
ADAMTS5	0	genome.wustl.edu	37	21	28306907	28306907	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	28306907	28306907	G	A	SNP	ADAMTS5	ENST00000284987	human	ensembl	74_37	-1	known	missense	c.1567	p.R523C	0.983	smart_ADAM_Cys-rich	pfam_ADAM_spacer1,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS5,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS5	HGNC	ENSG00000154736				71	0	0	42	21	33.3333
KRTAP27-1	0	genome.wustl.edu	37	21	31709589	31709589	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	31709589	31709589	G	T	SNP	KRTAP27-1	ENST00000382835	human	ensembl	74_37	-1	known	missense	c.398	p.P133H	0.611	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP27-1	HGNC	ENSG00000206107				259	0	0	153	67	30.4545
SLC5A3	0	genome.wustl.edu	37	21	35468425	35468425	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	35468425	35468425	A	G	SNP	SLC5A3	ENST00000381151	human	ensembl	74_37	+1	known	missense	c.928	p.M310V	1.000	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A3	HGNC	ENSG00000198743				149	0	0	77	49	38.8889
TTC3	0	genome.wustl.edu	37	21	38525269	38525269	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	38525269	38525269	A	G	SNP	TTC3	ENST00000354749	human	ensembl	74_37	+1	known	missense	c.2432	p.Q811R	0.045	NULL	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like_dom,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC	ENSG00000182670				58	0	0	25	3	10.7143
KCNJ6	0	genome.wustl.edu	37	21	39087042	39087042	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	39087042	39087042	C	T	SNP	KCNJ6	ENST00000288309	human	ensembl	74_37	-1	known	missense	c.418	p.V140I	1.000	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.2	-	no_errors	KCNJ6	HGNC	ENSG00000157542				130	0	0	74	34	31.4815
DSCAM	0	genome.wustl.edu	37	21	41450854	41450854	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	41450854	41450854	G	A	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	missense	c.4471	p.R1491C	0.528	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587				61	0	0	29	20	40.8163
ABCG1	0	genome.wustl.edu	37	21	43716452	43716452	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	43716452	43716452	C	T	SNP	ABCG1	ENST00000398437	human	ensembl	74_37	+1	known	missense	c.2425	p.R809C	1.000	tigrfam_Pigment_permease	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Pigment_permease	-	no_errors	ABCG1	HGNC	ENSG00000160179				83	0	0	45	15	25
UBASH3A	0	genome.wustl.edu	37	21	43836627	43836627	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	43836627	43836627	G	A	SNP	UBASH3A	ENST00000319294	human	ensembl	74_37	+1	known	silent	c.744	p.T248	0.578	NULL	pfam_His_Pase_superF_clade-1,pfam_SH3_domain,superfamily_SH3_domain,superfamily_UBA-like,smart_SH3_domain,pfscan_SH3_domain,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBASH3A	HGNC	ENSG00000160185				56	0	0	51	24	32
TRAPPC10	0	genome.wustl.edu	37	21	45475599	45475599	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	45475599	45475599	C	A	SNP	TRAPPC10	ENST00000291574	human	ensembl	74_37	+1	known	missense	c.503	p.P168H	1.000	NULL	NULL	-	no_errors	TRAPPC10	HGNC	ENSG00000160218				165	0	0	83	36	30.2521
DNMT3L	0	genome.wustl.edu	37	21	45679387	45679387	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	45679387	45679387	G	T	SNP	DNMT3L	ENST00000270172	human	ensembl	74_37	-1	known	missense	c.277	p.Q93K	1.000	superfamily_Znf_FYVE_PHD	superfamily_Znf_FYVE_PHD	-	no_errors	DNMT3L	HGNC	ENSG00000142182				134	0	0	59	25	29.7619
KRTAP10-4	0	genome.wustl.edu	37	21	45994173	45994173	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	45994173	45994173	A	G	SNP	KRTAP10-4	ENST00000400374	human	ensembl	74_37	+1	known	missense	c.538	p.S180G	0.534	NULL	NULL	-	no_errors	KRTAP10-4	HGNC	ENSG00000215454				66	0	0	55	35	38.8889
KRTAP10-6	0	genome.wustl.edu	37	21	46011828	46011828	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	46011828	46011828	T	C	SNP	KRTAP10-6	ENST00000400368	human	ensembl	74_37	-1	known	missense	c.538	p.S180G	0.919	NULL	NULL	-	no_errors	KRTAP10-6	HGNC	ENSG00000188155				179	0	0	243	26	9.66543
COL18A1	0	genome.wustl.edu	37	21	46932115	46932115	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	46932115	46932115	G	A	SNP	COL18A1	ENST00000359759	human	ensembl	74_37	+1	known	missense	c.5068	p.V1690M	1.000	pfam_Collagenase_NC10/endostatin,superfamily_C-type_lectin_fold	pfam_Collagenase_NC10/endostatin,pfam_DUF959_COL18_N,pfam_Collagen,pfam_Frizzled_dom,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,superfamily_Frizzled_dom,smart_Frizzled_dom,smart_Laminin_G,pfscan_Frizzled_dom	-	no_errors	COL18A1	HGNC	ENSG00000182871				18	0	0	22	11	33.3333
FTCD	0	genome.wustl.edu	37	21	47570343	47570343	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	47570343	47570343	C	A	SNP	FTCD	ENST00000359679	human	ensembl	74_37	-1	known	missense	c.733	p.A245S	0.054	pfam_Formiminotransferase_C,superfamily_FormiminoTrfase_N/C_subdom,tigrfam_Formiminotransferase_cat	pfam_Formiminotransferase_N,pfam_Formiminotransferase_C,pfam_Cyclodeamin/CycHdrlase,superfamily_FormiminoTrfase_N/C_subdom,superfamily_Cyclodeamin/CycHdrlase,tigrfam_Formiminotransferase_cat	-	no_errors	FTCD	HGNC	ENSG00000160282				154	0	0	77	27	25.9615
S100B	0	genome.wustl.edu	37	21	48022217	48022217	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	48022217	48022217	T	C	SNP	S100B	ENST00000291700	human	ensembl	74_37	-1	known	missense	c.112	p.N38D	0.998	pfam_S100_Ca-bd_sub	pfam_S100_Ca-bd_sub,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	S100B	HGNC	ENSG00000160307				66	0	0	33	19	36.5385
GAB4	0	genome.wustl.edu	37	22	17444639	17444639	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	17444639	17444639	C	T	SNP	GAB4	ENST00000400588	human	ensembl	74_37	-1	known	silent	c.1557	p.A519	0.998	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB4	HGNC	ENSG00000215568				58	0	0	34	15	30.6122
CECR6	0	genome.wustl.edu	37	22	17601106	17601106	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	17601106	17601106	C	T	SNP	CECR6	ENST00000331437	human	ensembl	74_37	-1	known	silent	c.912	p.A304	0.002	NULL	NULL	-	no_errors	CECR6	HGNC	ENSG00000183307				28	0	0	22	15	40.5405
BCL2L13	0	genome.wustl.edu	37	22	18210180	18210180	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	18210180	18210180	C	T	SNP	BCL2L13	ENST00000317582	human	ensembl	74_37	+1	known	silent	c.1338	p.A446	0.017	NULL	pfam_Blc2_fam,pfscan_Bcl2-like	-	no_errors	BCL2L13	HGNC	ENSG00000099968				156	0	0	76	62	44.9275
CDC45	0	genome.wustl.edu	37	22	19504377	19504377	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	19504377	19504377	A	G	SNP	CDC45	ENST00000437685	human	ensembl	74_37	+1	known	missense	c.1693	p.T565A	1.000	pfam_CDC45	pfam_CDC45	-	no_errors	CDC45	HGNC	ENSG00000093009				84	0	0	39	11	22
ZDHHC8	0	genome.wustl.edu	37	22	20128528	20128528	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	20128528	20128528	G	A	SNP	ZDHHC8	ENST00000405930	human	ensembl	74_37	+1	known	missense	c.887	p.R296H	0.989	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC8	HGNC	ENSG00000099904				112	0	0	71	42	37.1681
ZDHHC8	0	genome.wustl.edu	37	22	20130391	20130391	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	20130391	20130391	C	A	SNP	ZDHHC8	ENST00000405930	human	ensembl	74_37	+1	known	missense	c.1238	p.A413D	0.987	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC8	HGNC	ENSG00000099904				33	0	0	32	5	13.5135
ZNF74	0	genome.wustl.edu	37	22	20760329	20760329	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	20760329	20760329	G	A	SNP	ZNF74	ENST00000356671	human	ensembl	74_37	+1	known	missense	c.1006	p.A336T	0.021	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF74	HGNC	ENSG00000185252				65	0	0	73	42	36.5217
PPIL2	0	genome.wustl.edu	37	22	22042393	22042393	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	22042393	22042393	C	T	SNP	PPIL2	ENST00000412327	human	ensembl	74_37	+1	known	missense	c.1019	p.T340M	1.000	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom	pfam_Cyclophilin-like_PPIase_dom,pfam_Rtf2_RING-finger,superfamily_Cyclophilin-like_PPIase_dom,smart_Ubox_domain,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIL2	HGNC	ENSG00000100023				279	0	0	134	70	34.3137
MAPK1	0	genome.wustl.edu	37	22	22162026	22162026	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	22162026	22162026	G	A	SNP	MAPK1	ENST00000215832	human	ensembl	74_37	-1	known	missense	c.229	p.R77C	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK1/2,prints_MAPK_ERK3/4	-	no_errors	MAPK1	HGNC	ENSG00000100030				94	0	0	60	18	23.0769
ZNF280A	0	genome.wustl.edu	37	22	22869780	22869780	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	22869780	22869780	C	T	SNP	ZNF280A	ENST00000302097	human	ensembl	74_37	-1	known	missense	c.175	p.V59I	0.021	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF280A	HGNC	ENSG00000169548				98	0	0	62	25	28.7356
CABIN1	0	genome.wustl.edu	37	22	24463060	24463060	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	24463060	24463060	G	T	SNP	CABIN1	ENST00000263119	human	ensembl	74_37	+1	known	silent	c.2160	p.G720	0.487	NULL	pfam_MEF2_binding,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CABIN1	HGNC	ENSG00000099991				71	0	0	48	26	35.1351
SGSM1	0	genome.wustl.edu	37	22	25251568	25251568	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	25251568	25251568	C	T	SNP	SGSM1	ENST00000400359	human	ensembl	74_37	+1	known	missense	c.722	p.A241V	1.000	NULL	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM1	HGNC	ENSG00000167037				47	0	0	25	14	35.8974
CRYBB3	0	genome.wustl.edu	37	22	25601330	25601330	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	25601330	25601330	G	A	SNP	CRYBB3	ENST00000215855	human	ensembl	74_37	+1	known	splice_site	c.470+1	e4+1	1.000	-	-	-	no_errors	CRYBB3	HGNC	ENSG00000100053				29	0	0	16	14	46.6667
MYO18B	0	genome.wustl.edu	37	22	26176142	26176142	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	26176142	26176142	C	T	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	missense	c.2188	p.R730C	0.989	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454				20	0	0	9	9	50
TPST2	0	genome.wustl.edu	37	22	26937081	26937081	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	26937081	26937081	C	T	SNP	TPST2	ENST00000338754	human	ensembl	74_37	-1	known	silent	c.516	p.L172	0.068	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	TPST2	HGNC	ENSG00000128294				141	0	0	102	36	26.087
EMID1	0	genome.wustl.edu	37	22	29627111	29627111	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	29627111	29627111	G	A	SNP	EMID1	ENST00000334018	human	ensembl	74_37	+1	known	missense	c.568	p.G190R	0.815	NULL	pfam_Collagen,pfam_EMI_domain,pfscan_EMI_domain	-	no_errors	EMID1	HGNC	ENSG00000186998				102	0	0	55	29	34.5238
EWSR1	0	genome.wustl.edu	37	22	29670263	29670263	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	29670263	29670263	C	T	SNP	EWSR1	ENST00000414183	human	ensembl	74_37	+1	known	missense	c.236	p.T79I	1.000	NULL	pfam_Znf_RanBP2,pfam_RRM_dom,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	EWSR1	HGNC	ENSG00000182944				112	0	0	71	15	17.4419
ASCC2	0	genome.wustl.edu	37	22	30221196	30221196	+	Nonsense_Mutation	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	30221196	30221196	A	C	SNP	ASCC2	ENST00000307790	human	ensembl	74_37	-1	known	nonsense	c.291	p.Y97*	1.000	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	ASCC2	HGNC	ENSG00000100325				123	0	0	71	47	39.8305
MTMR3	0	genome.wustl.edu	37	22	30416523	30416523	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	30416523	30416523	G	A	SNP	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	missense	c.2875	p.A959T	0.076	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330				108	0	0	94	32	25.3968
GATSL3	0	genome.wustl.edu	37	22	30681648	30681648	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	30681648	30681648	G	A	SNP	GATSL3	ENST00000407689	human	ensembl	74_37	-1	known	silent	c.951	p.I317	0.013	NULL	NULL	-	no_errors	GATSL3	HGNC	ENSG00000239282				8	0	0	11	4	26.6667
MTFP1	0	genome.wustl.edu	37	22	30823345	30823345	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	30823345	30823345	C	T	SNP	MTFP1	ENST00000266263	human	ensembl	74_37	+1	known	missense	c.383	p.A128V	0.912	pfam_Mitochondrial_18_kDa_protein_	pfam_Mitochondrial_18_kDa_protein_	-	no_errors	MTFP1	HGNC	ENSG00000242114				231	0	0	121	71	36.9792
TCN2	0	genome.wustl.edu	37	22	31019016	31019016	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	31019016	31019016	G	A	SNP	TCN2	ENST00000215838	human	ensembl	74_37	+1	known	missense	c.1168	p.G390R	0.108	NULL	pfam_Cbl-bd_transpt_euk,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	TCN2	HGNC	ENSG00000185339				124	0	0	56	30	34.8837
CSF2RB	0	genome.wustl.edu	37	22	37332682	37332682	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	37332682	37332682	C	T	SNP	CSF2RB	ENST00000262825	human	ensembl	74_37	+1	known	missense	c.1574	p.P525L	0.001	pirsf_IL3_rcpt_beta	pirsf_IL3_rcpt_beta,pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	CSF2RB	HGNC	ENSG00000100368				52	0	0	32	14	30.4348
SSTR3	0	genome.wustl.edu	37	22	37603572	37603572	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	37603572	37603572	C	T	SNP	SSTR3	ENST00000328544	human	ensembl	74_37	-1	known	missense	c.271	p.E91K	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Neuropept_B/W_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_3,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Somatstn_rcpt_5,prints_Neuropept_B/W_rcpt	-	no_errors	SSTR3	HGNC	ENSG00000183473				79	0	0	68	51	42.8571
CARD10	0	genome.wustl.edu	37	22	37912113	37912113	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	37912113	37912113	C	T	SNP	CARD10	ENST00000251973	human	ensembl	74_37	-1	known	missense	c.566	p.R189Q	1.000	NULL	pfam_CARD,superfamily_DEATH-like_dom,pfscan_CARD	-	no_errors	CARD10	HGNC	ENSG00000100065				16	0	0	13	4	23.5294
TRIOBP	0	genome.wustl.edu	37	22	38120532	38120532	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	38120532	38120532	G	A	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	missense	c.1969	p.D657N	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106				116	0	0	125	66	34.555
GALR3	0	genome.wustl.edu	37	22	38220915	38220915	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	38220915	38220915	G	A	SNP	GALR3	ENST00000249041	human	ensembl	74_37	+1	known	missense	c.545	p.R182H	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Galanin_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Galanin_rcpt,prints_GPCR_Rhodpsn,prints_Galnin_3_rcpt	-	no_errors	GALR3	HGNC	ENSG00000128310				14	0	0	14	6	30
SUN2	0	genome.wustl.edu	37	22	39146931	39146931	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	39146931	39146931	C	T	SNP	SUN2	ENST00000216064	human	ensembl	74_37	-1	known	silent	c.396	p.S132	0.060	NULL	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUN2	HGNC	ENSG00000100242				61	0	0	38	17	30.9091
SUN2	0	genome.wustl.edu	37	22	39148568	39148568	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	39148568	39148568	G	A	SNP	SUN2	ENST00000216064	human	ensembl	74_37	-1	known	silent	c.66	p.S22	0.837	NULL	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUN2	HGNC	ENSG00000100242				46	0	0	42	22	34.375
RRP7A	0	genome.wustl.edu	37	22	42914119	42914119	+	Silent	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	42914119	42914119	A	C	SNP	RRP7A	ENST00000323013	human	ensembl	74_37	-1	known	silent	c.108	p.A36	0.003	NULL	NULL	-	no_errors	RRP7A	HGNC	ENSG00000189306				52	0	0	26	10	27.7778
EFCAB6	0	genome.wustl.edu	37	22	44028099	44028099	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	44028099	44028099	C	T	SNP	EFCAB6	ENST00000262726	human	ensembl	74_37	-1	known	silent	c.2118	p.P706	0.000	NULL	pfam_EF_hand_Ca-bd_contain_6,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFCAB6	HGNC	ENSG00000186976				181	0	0	81	33	28.9474
TBC1D22A	0	genome.wustl.edu	37	22	47370253	47370253	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	47370253	47370253	C	T	SNP	TBC1D22A	ENST00000337137	human	ensembl	74_37	+1	known	silent	c.1083	p.A361	0.995	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D22A	HGNC	ENSG00000054611				20	0	0	17	12	41.3793
ZBED4	0	genome.wustl.edu	37	22	50278666	50278666	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	50278666	50278666	G	T	SNP	ZBED4	ENST00000216268	human	ensembl	74_37	+1	known	missense	c.1356	p.K452N	1.000	NULL	pfam_Znf_BED_prd,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED4	HGNC	ENSG00000100426				145	0	0	77	53	40.7692
TTLL8	0	genome.wustl.edu	37	22	50485624	50485624	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	50485624	50485624	G	A	SNP	TTLL8	ENST00000266182	human	ensembl	74_37	-1	known	silent	c.366	p.Y122	0.936	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL8	HGNC	ENSG00000138892				44	0	0	34	21	38.1818
MOV10L1	0	genome.wustl.edu	37	22	50591531	50591531	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	50591531	50591531	C	T	SNP	MOV10L1	ENST00000262794	human	ensembl	74_37	+1	known	missense	c.2950	p.R984W	0.079	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold	-	no_errors	MOV10L1	HGNC	ENSG00000073146				147	0	0	92	51	35.6643
KLHDC7B	0	genome.wustl.edu	37	22	50988085	50988085	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	50988085	50988085	G	A	SNP	KLHDC7B	ENST00000395676	human	ensembl	74_37	+1	known	missense	c.1490	p.R497H	1.000	NULL	pfam_Kelch_1,smart_Kelch_1	-	no_errors	KLHDC7B	HGNC	ENSG00000130487				114	0	0	92	41	30.8271
ATP2B2	0	genome.wustl.edu	37	3	10370396	10370396	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	10370396	10370396	C	T	SNP	ATP2B2	ENST00000467702	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.116	-	-	-	no_errors	ATP2B2	HGNC	ENSG00000157087				13	0	0	15	3	16.6667
DZIP3	0	genome.wustl.edu	37	3	108409725	108409725	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	108409725	108409725	G	A	SNP	DZIP3	ENST00000361582	human	ensembl	74_37	+1	known	missense	c.3608	p.R1203Q	0.425	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	DZIP3	HGNC	ENSG00000198919				75	0	0	54	27	33.3333
BOC	0	genome.wustl.edu	37	3	112998721	112998721	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	112998721	112998721	G	A	SNP	BOC	ENST00000273395	human	ensembl	74_37	+1	known	missense	c.2074	p.E692K	0.995	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	BOC	HGNC	ENSG00000144857				148	0	0	99	33	25
KIAA2018	0	genome.wustl.edu	37	3	113376125	113376125	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	113376125	113376125	C	T	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	silent	c.4404	p.Q1468	0.996	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542				46	0	0	39	4	9.30233
CD80	0	genome.wustl.edu	37	3	119276481	119276481	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	119276481	119276481	C	G	SNP	CD80	ENST00000264246	human	ensembl	74_37	-1	known	missense	c.95	p.C32S	0.113	pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_C1-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CD80	HGNC	ENSG00000121594				38	0	0	25	12	32.4324
PARP9	0	genome.wustl.edu	37	3	122247435	122247435	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	122247435	122247435	G	A	SNP	PARP9	ENST00000360356	human	ensembl	74_37	-1	known	missense	c.2341	p.P781S	0.696	pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP9	HGNC	ENSG00000138496				109	0	0	68	33	32.6733
KALRN	0	genome.wustl.edu	37	3	124165071	124165071	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	124165071	124165071	G	A	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.3371	p.R1124Q	1.000	NULL	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145				85	0	0	63	24	27.5862
PPARG	0	genome.wustl.edu	37	3	12422929	12422929	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	12422929	12422929	G	A	SNP	PPARG	ENST00000287820	human	ensembl	74_37	+1	known	missense	c.419	p.R140H	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_PPARgamma_N,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_1Cnucl_rcpt,prints_1Cnucl_rcpt_G,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	PPARG	HGNC	ENSG00000132170				45	0	0	16	9	36
KALRN	0	genome.wustl.edu	37	3	124281775	124281775	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	124281775	124281775	C	T	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.5015	p.T1672M	1.000	superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145				41	0	0	27	12	30.7692
HEG1	0	genome.wustl.edu	37	3	124748138	124748138	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	124748138	124748138	C	T	SNP	HEG1	ENST00000311127	human	ensembl	74_37	-1	known	missense	c.511	p.G171R	0.001	NULL	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HEG1	HGNC	ENSG00000173706				41	0	0	23	5	17.8571
HEG1	0	genome.wustl.edu	37	3	124748159	124748159	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	124748159	124748159	C	T	SNP	HEG1	ENST00000311127	human	ensembl	74_37	-1	known	missense	c.490	p.A164T	0.000	NULL	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HEG1	HGNC	ENSG00000173706				51	0	0	26	4	13.3333
C3orf22	0	genome.wustl.edu	37	3	126268880	126268880	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	126268880	126268880	G	A	SNP	C3orf22	ENST00000318225	human	ensembl	74_37	-1	known	missense	c.257	p.P86L	0.000	NULL	NULL	-	no_errors	C3orf22	HGNC	ENSG00000180697				90	0	0	51	20	28.169
TPRA1	0	genome.wustl.edu	37	3	127294606	127294606	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	127294606	127294606	C	T	SNP	TPRA1	ENST00000355552	human	ensembl	74_37	-1	known	missense	c.656	p.R219H	1.000	pfam_Uncharacterised_TM-40	pfam_Uncharacterised_TM-40	-	no_errors	TPRA1	HGNC	ENSG00000163870				111	0	0	60	24	28.5714
TMEM40	0	genome.wustl.edu	37	3	12778317	12778317	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	12778317	12778317	C	T	SNP	TMEM40	ENST00000431022	human	ensembl	74_37	-1	known	missense	c.538	p.V180I	0.996	NULL	NULL	-	no_errors	TMEM40	HGNC	ENSG00000088726				291	0	0	189	78	29.2135
CAND2	0	genome.wustl.edu	37	3	12892167	12892167	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	12892167	12892167	G	A	SNP	CAND2	ENST00000454887	human	ensembl	74_37	+1	putative	missense	c.277	p.A93T	1.000	pfam_TATA-bd_TIP120,superfamily_ARM-type_fold	pfam_TATA-bd_TIP120,superfamily_ARM-type_fold	-	no_errors	CAND2	HGNC	ENSG00000144712				57	0	0	61	22	26.506
ASTE1	0	genome.wustl.edu	37	3	130743390	130743390	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	130743390	130743390	T	C	SNP	ASTE1	ENST00000264992	human	ensembl	74_37	-1	known	missense	c.761	p.H254R	0.924	NULL	pfam_XPG_DNA_repair_N	-	no_errors	ASTE1	HGNC	ENSG00000034533				75	0	0	28	18	39.1304
PCOLCE2	0	genome.wustl.edu	37	3	142539759	142539759	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	142539759	142539759	G	A	SNP	PCOLCE2	ENST00000485766	human	ensembl	74_37	-1	putative	missense	c.839	p.A280V	0.983	NULL	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	-	no_errors	PCOLCE2	HGNC	ENSG00000163710				51	0	0	55	10	15.3846
GRIP2	0	genome.wustl.edu	37	3	14564512	14564512	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	14564512	14564512	G	A	SNP	GRIP2	ENST00000273083	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.122	-	-	-	no_errors	GRIP2	HGNC	ENSG00000144596				107	0	0	64	45	41.2844
ZIC1	0	genome.wustl.edu	37	3	147128515	147128515	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	147128515	147128515	G	A	SNP	ZIC1	ENST00000282928	human	ensembl	74_37	+1	known	missense	c.616	p.A206T	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC1	HGNC	ENSG00000152977				63	0	0	51	20	28.169
FGD5	0	genome.wustl.edu	37	3	14862390	14862390	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	14862390	14862390	C	T	SNP	FGD5	ENST00000285046	human	ensembl	74_37	+1	known	silent	c.1812	p.S604	0.996	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD5	HGNC	ENSG00000154783				104	0	0	73	24	24.7423
HACL1	0	genome.wustl.edu	37	3	15604925	15604925	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	15604925	15604925	G	A	SNP	HACL1	ENST00000321169	human	ensembl	74_37	-1	known	silent	c.1644	p.D548	0.849	pfam_TPP_enzyme-bd_C	pfam_Thiamin_PyroP_enz_TPP-bd_dom,pfam_Thiamin_PyroP_enz_cen_dom,pfam_TPP_enzyme-bd_C,pfam_CO_DH_CoA_synth	-	no_errors	HACL1	HGNC	ENSG00000131373				71	0	0	60	18	23.0769
OTOL1	0	genome.wustl.edu	37	3	161214699	161214699	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	161214699	161214699	C	A	SNP	OTOL1	ENST00000327928	human	ensembl	74_37	+1	known	missense	c.104	p.S35Y	0.983	NULL	pfam_Collagen,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	OTOL1	HGNC	ENSG00000182447				28	0	0	35	15	30
BCHE	0	genome.wustl.edu	37	3	165547538	165547538	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	165547538	165547538	G	A	SNP	BCHE	ENST00000264381	human	ensembl	74_37	-1	known	silent	c.1284	p.C428	0.993	pfam_CarbesteraseB,prints_Cholinesterase	pfam_CarbesteraseB,pfam_AChE_tetra,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	BCHE	HGNC	ENSG00000114200				123	0	0	91	5	5.20833
PRKCI	0	genome.wustl.edu	37	3	169999697	169999697	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	169999697	169999697	T	C	SNP	PRKCI	ENST00000295797	human	ensembl	74_37	+1	known	silent	c.1008	p.N336	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_PKC_zeta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_PKC_zeta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCI	HGNC	ENSG00000163558				107	0	0	51	16	23.8806
SLC7A14	0	genome.wustl.edu	37	3	170204021	170204021	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	170204021	170204021	G	A	SNP	SLC7A14	ENST00000231706	human	ensembl	74_37	-1	known	missense	c.896	p.A299V	0.999	pfam_AA-permease/SLC12A_dom	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC7A14	HGNC	ENSG00000013293				39	0	0	28	21	42.8571
NLGN1	0	genome.wustl.edu	37	3	173322839	173322839	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	173322839	173322839	G	A	SNP	NLGN1	ENST00000401917	human	ensembl	74_37	+1	known	missense	c.451	p.E151K	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN1	HGNC	ENSG00000169760				144	0	0	71	36	33.6449
TBC1D5	0	genome.wustl.edu	37	3	17550029	17550029	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	17550029	17550029	G	A	SNP	TBC1D5	ENST00000253692	human	ensembl	74_37	-1	known	silent	c.34	p.L12	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D5	HGNC	ENSG00000131374				125	0	0	82	19	18.8119
MCF2L2	0	genome.wustl.edu	37	3	183059378	183059378	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	183059378	183059378	T	C	SNP	MCF2L2	ENST00000328913	human	ensembl	74_37	-1	known	missense	c.316	p.R106G	1.000	superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2L2	HGNC	ENSG00000053524				76	0	0	37	18	32.7273
ABCC5	0	genome.wustl.edu	37	3	183705643	183705643	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	183705643	183705643	C	A	SNP	ABCC5	ENST00000334444	human	ensembl	74_37	-1	known	missense	c.506	p.R169M	1.000	superfamily_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC5	HGNC	ENSG00000114770				68	0	0	65	21	24.4186
CHRD	0	genome.wustl.edu	37	3	184104636	184104636	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	184104636	184104636	C	T	SNP	CHRD	ENST00000204604	human	ensembl	74_37	+1	known	nonsense	c.2200	p.R734*	1.000	pfam_VWF_C,smart_VWF_C,pirsf_Chordin,pfscan_VWF_C	pfam_CHRD,pfam_VWF_C,smart_VWF_C,smart_CHRD,pirsf_Chordin,pfscan_CHRD,pfscan_VWF_C	-	no_errors	CHRD	HGNC	ENSG00000090539				54	0	0	39	19	32.7586
BCL6	0	genome.wustl.edu	37	3	187444607	187444607	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	187444607	187444607	G	T	SNP	BCL6	ENST00000232014	human	ensembl	74_37	-1	known	silent	c.1620	p.T540	0.982	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	BCL6	HGNC	ENSG00000113916				120	0	0	61	28	31.4607
TPRG1	0	genome.wustl.edu	37	3	189038422	189038422	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	189038422	189038422	G	C	SNP	TPRG1	ENST00000345063	human	ensembl	74_37	+1	known	missense	c.641	p.G214A	0.708	NULL	pfam_Inositol_phosphatase	-	no_errors	TPRG1	HGNC	ENSG00000188001				38	0	0	35	3	7.89474
MUC20	0	genome.wustl.edu	37	3	195452969	195452969	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	195452969	195452969	C	T	SNP	MUC20	ENST00000447234	human	ensembl	74_37	+1	known	missense	c.1495	p.P499S	0.000	NULL	NULL	-	no_errors	MUC20	HGNC	ENSG00000176945				64	0	0	84	22	20.7547
SMCO1	0	genome.wustl.edu	37	3	196235165	196235165	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	196235165	196235165	C	T	SNP	SMCO1	ENST00000397537	human	ensembl	74_37	-1	known	missense	c.238	p.V80I	0.168	NULL	NULL	-	no_errors	SMCO1	HGNC	ENSG00000214097				99	0	0	52	22	29.7297
OXSM	0	genome.wustl.edu	37	3	25833299	25833299	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	25833299	25833299	C	A	SNP	OXSM	ENST00000280701	human	ensembl	74_37	+1	known	missense	c.788	p.A263E	0.998	pfam_Ketoacyl_synth_N,superfamily_Thiolase-like,smart_PKS_Beta-ketoAc_synthase_dom,tigrfam_3-oxoacyl-ACP_synth-2	pfam_Ketoacyl_synth_N,pfam_Ketoacyl_synth_C,pfam_Thiolase_N,superfamily_Thiolase-like,smart_PKS_Beta-ketoAc_synthase_dom,tigrfam_3-oxoacyl-ACP_synth-2	-	no_errors	OXSM	HGNC	ENSG00000151093				105	0	0	53	16	23.1884
CNTN4-AS1	0	genome.wustl.edu	37	3	3080721	3080721	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	3080721	3080721	G	A	SNP	CNTN4-AS1	ENST00000442749	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CNTN4-AS1	HGNC	ENSG00000237990				33	0	0	11	8	42.1053
CMTM8	0	genome.wustl.edu	37	3	32409430	32409430	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	32409430	32409430	G	A	SNP	CMTM8	ENST00000307526	human	ensembl	74_37	+1	known	missense	c.388	p.V130I	0.995	pfam_Marvel	pfam_Marvel,prints_MAL	-	no_errors	CMTM8	HGNC	ENSG00000170293				109	0	0	38	30	44.1176
TRIM71	0	genome.wustl.edu	37	3	32860361	32860361	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	32860361	32860361	G	A	SNP	TRIM71	ENST00000383763	human	ensembl	74_37	+1	known	silent	c.789	p.P263	0.994	NULL	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM71	HGNC	ENSG00000206557				90	0	0	65	40	38.0952
PDCD6IP	0	genome.wustl.edu	37	3	33866819	33866819	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	33866819	33866819	A	T	SNP	PDCD6IP	ENST00000457054	human	ensembl	74_37	+1	known	missense	c.603	p.L201F	1.000	pfam_BRO1_dom,pfscan_BRO1_dom	pfam_BRO1_dom,pfscan_BRO1_dom	-	no_errors	PDCD6IP	HGNC	ENSG00000170248				102	0	0	45	25	35.7143
ACVR2B	0	genome.wustl.edu	37	3	38524050	38524050	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	38524050	38524050	C	T	SNP	ACVR2B	ENST00000352511	human	ensembl	74_37	+1	known	missense	c.1343	p.P448L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2B	HGNC	ENSG00000114739				27	0	0	14	12	46.1538
SCN5A	0	genome.wustl.edu	37	3	38592162	38592162	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	38592162	38592162	C	T	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.5701	p.E1901K	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				140	0	0	82	53	39.2593
SEC22C	0	genome.wustl.edu	37	3	42605166	42605166	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	42605166	42605166	G	A	SNP	SEC22C	ENST00000449617	human	ensembl	74_37	-1	known	missense	c.311	p.S104L	0.006	NULL	superfamily_Longin-like_dom	-	no_errors	SEC22C	HGNC	ENSG00000093183				76	0	0	56	30	34.8837
ANO10	0	genome.wustl.edu	37	3	43618558	43618558	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	43618558	43618558	C	T	SNP	ANO10	ENST00000292246	human	ensembl	74_37	-1	known	missense	c.788	p.R263H	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO10	HGNC	ENSG00000160746				96	0	0	60	46	43.3962
ZNF445	0	genome.wustl.edu	37	3	44489494	44489494	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	44489494	44489494	G	A	SNP	ZNF445	ENST00000396077	human	ensembl	74_37	-1	known	missense	c.1669	p.R557C	0.957	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF445	HGNC	ENSG00000185219				174	0	0	69	34	33.0097
ZNF502	0	genome.wustl.edu	37	3	44763579	44763579	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	44763579	44763579	C	T	SNP	ZNF502	ENST00000296091	human	ensembl	74_37	+1	known	missense	c.1270	p.R424W	0.003	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF502	HGNC	ENSG00000196653				51	0	0	38	8	17.3913
KIAA1143	0	genome.wustl.edu	37	3	44794850	44794850	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	44794850	44794850	C	T	SNP	KIAA1143	ENST00000296121	human	ensembl	74_37	-1	known	missense	c.448	p.E150K	1.000	NULL	NULL	-	no_errors	KIAA1143	HGNC	ENSG00000163807				114	0	0	41	13	24.0741
TGM4	0	genome.wustl.edu	37	3	44952776	44952776	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	44952776	44952776	C	T	SNP	TGM4	ENST00000296125	human	ensembl	74_37	+1	known	silent	c.1791	p.G597	0.553	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_N,pfam_Transglutaminase_C,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM4	HGNC	ENSG00000163810				144	0	0	82	38	31.6667
CCR1	0	genome.wustl.edu	37	3	46245704	46245704	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	46245704	46245704	G	A	SNP	CCR1	ENST00000296140	human	ensembl	74_37	-1	known	missense	c.101	p.A34V	0.126	prints_Chemokine_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR1,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CCR5,prints_NPY_rcpt,prints_ATII_rcpt	-	no_errors	CCR1	HGNC	ENSG00000163823				60	0	0	36	20	35.7143
ITPR1	0	genome.wustl.edu	37	3	4715042	4715042	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	4715042	4715042	G	A	SNP	ITPR1	ENST00000302640	human	ensembl	74_37	+1	known	silent	c.2382	p.S794	0.004	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR1	HGNC	ENSG00000150995				152	0	0	76	58	43.2836
ITPR1	0	genome.wustl.edu	37	3	4715060	4715060	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	4715060	4715060	C	T	SNP	ITPR1	ENST00000302640	human	ensembl	74_37	+1	known	silent	c.2400	p.I800	0.982	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR1	HGNC	ENSG00000150995				153	0	0	134	10	6.94444
PLXNB1	0	genome.wustl.edu	37	3	48459458	48459458	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	48459458	48459458	G	A	SNP	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	missense	c.3236	p.T1079I	1.000	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050				57	0	0	49	25	33.7838
SLC26A6	0	genome.wustl.edu	37	3	48668054	48668054	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	48668054	48668054	C	T	SNP	SLC26A6	ENST00000395550	human	ensembl	74_37	-1	known	missense	c.1234	p.G412R	1.000	pfam_Sulph_transpt,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A6	HGNC	ENSG00000225697				21	0	0	8	2	20
CELSR3	0	genome.wustl.edu	37	3	48696614	48696614	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	48696614	48696614	G	A	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.3454	p.R1152W	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				114	1	0.869565	81	21	20.5882
P4HTM	0	genome.wustl.edu	37	3	49042450	49042450	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	49042450	49042450	C	T	SNP	P4HTM	ENST00000343546	human	ensembl	74_37	+1	known	silent	c.1044	p.N348	0.977	smart_Pro_4_hyd_alph	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	P4HTM	HGNC	ENSG00000178467				113	1	0.877193	80	48	37.5
QRICH1	0	genome.wustl.edu	37	3	49083909	49083909	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	49083909	49083909	A	G	SNP	QRICH1	ENST00000357496	human	ensembl	74_37	-1	known	silent	c.1620	p.G540	0.998	NULL	pfam_DUF3504,superfamily_DEATH-like_dom	-	no_errors	QRICH1	HGNC	ENSG00000198218				148	0	0	64	31	32.6316
USP4	0	genome.wustl.edu	37	3	49318216	49318216	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	49318216	49318216	C	T	SNP	USP4	ENST00000265560	human	ensembl	74_37	-1	known	missense	c.2605	p.A869T	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,smart_Pept_C19_DUSP,pfscan_Peptidase_C19/C67	-	no_errors	USP4	HGNC	ENSG00000114316				55	0	0	48	17	26.1538
BSN	0	genome.wustl.edu	37	3	49694655	49694655	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	49694655	49694655	C	T	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	missense	c.7666	p.R2556W	1.000	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061				64	0	0	43	33	43.4211
GMPPB	0	genome.wustl.edu	37	3	49759471	49759471	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	49759471	49759471	C	T	SNP	GMPPB	ENST00000308375	human	ensembl	74_37	-1	known	missense	c.878	p.R293Q	1.000	NULL	pfam_NTP_transferase,pfam_Hexapep_transf	-	no_errors	GMPPB	HGNC	ENSG00000173540				91	0	0	64	39	37.8641
IP6K1	0	genome.wustl.edu	37	3	49775735	49775735	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	49775735	49775735	C	T	SNP	IP6K1	ENST00000321599	human	ensembl	74_37	-1	known	missense	c.344	p.R115H	1.000	NULL	pfam_IPK	-	no_errors	IP6K1	HGNC	ENSG00000176095				77	0	0	43	31	41.8919
TRAIP	0	genome.wustl.edu	37	3	49869390	49869390	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	49869390	49869390	G	A	SNP	TRAIP	ENST00000331456	human	ensembl	74_37	-1	known	silent	c.996	p.S332	0.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_Prefoldin,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TRAIP	HGNC	ENSG00000183763				102	0	0	110	7	5.98291
HYAL2	0	genome.wustl.edu	37	3	50357136	50357136	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	50357136	50357136	C	T	SNP	HYAL2	ENST00000357750	human	ensembl	74_37	-1	known	missense	c.785	p.R262H	0.000	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	HYAL2	HGNC	ENSG00000068001				80	0	0	55	34	38.2022
RASSF1	0	genome.wustl.edu	37	3	50369082	50369082	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	50369082	50369082	C	T	SNP	RASSF1	ENST00000357043	human	ensembl	74_37	-1	known	missense	c.680	p.R227H	0.353	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	pfam_Ras-assoc,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SARAH_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	RASSF1	HGNC	ENSG00000068028				142	0	0	116	30	20.5479
GRM2	0	genome.wustl.edu	37	3	51749692	51749692	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	51749692	51749692	C	T	SNP	GRM2	ENST00000395052	human	ensembl	74_37	+1	known	missense	c.1903	p.R635W	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM2	HGNC	ENSG00000164082				82	0	0	49	36	42.3529
IQCF1	0	genome.wustl.edu	37	3	51929174	51929174	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	51929174	51929174	G	A	SNP	IQCF1	ENST00000310914	human	ensembl	74_37	-1	known	missense	c.350	p.A117V	0.000	superfamily_P-loop_NTPase	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCF1	HGNC	ENSG00000173389				80	0	0	70	35	33.3333
DNAH1	0	genome.wustl.edu	37	3	52430481	52430481	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	52430481	52430481	C	T	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	missense	c.11357	p.P3786L	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841				12	0	0	11	8	42.1053
STAB1	0	genome.wustl.edu	37	3	52552861	52552861	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	52552861	52552861	C	T	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	silent	c.5010	p.H1670	0.896	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pfscan_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327				18	0	0	17	5	22.7273
SUCLG2	0	genome.wustl.edu	37	3	67548713	67548713	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	67548713	67548713	C	T	SNP	SUCLG2	ENST00000307227	human	ensembl	74_37	-1	known	missense	c.764	p.C255Y	1.000	tigrfam_Succ_CoA_synthase_bsu	pfam_ATP-grasp_succ-CoA_synth-type,pfam_CoA_ligase,superfamily_Succinyl-CoA_synth-like,tigrfam_Succ_CoA_synthase_bsu	-	no_errors	SUCLG2	HGNC	ENSG00000172340				39	0	0	21	9	30
TADA3	0	genome.wustl.edu	37	3	9831424	9831424	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	9831424	9831424	C	T	SNP	TADA3	ENST00000301964	human	ensembl	74_37	-1	known	missense	c.431	p.R144Q	1.000	NULL	pfam_Histone_AcTrfase_su3	-	no_errors	TADA3	HGNC	ENSG00000171148				158	0	0	95	55	36.6667
WDR1	0	genome.wustl.edu	37	4	10083028	10083028	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	10083028	10083028	C	T	SNP	WDR1	ENST00000382452	human	ensembl	74_37	-1	known	missense	c.1237	p.V413I	0.486	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR1	HGNC	ENSG00000071127				78	0	0	44	22	33.3333
SGMS2	0	genome.wustl.edu	37	4	108816772	108816772	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	108816772	108816772	G	A	SNP	SGMS2	ENST00000359079	human	ensembl	74_37	+1	known	silent	c.63	p.T21	0.010	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase	-	no_errors	SGMS2	HGNC	ENSG00000164023				115	0	0	95	5	5
COL25A1	0	genome.wustl.edu	37	4	109774059	109774059	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	109774059	109774059	G	A	SNP	COL25A1	ENST00000399132	human	ensembl	74_37	-1	known	missense	c.1343	p.T448M	1.000	pfam_Collagen	pfam_Collagen	-	no_errors	COL25A1	HGNC	ENSG00000188517				83	0	0	49	28	36.3636
NUDT6	0	genome.wustl.edu	37	4	123838790	123838790	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	123838790	123838790	C	T	SNP	NUDT6	ENST00000304430	human	ensembl	74_37	-1	known	missense	c.308	p.R103Q	0.856	prints_Nudix_hydrolase6-like	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,prints_Nudix_hydrolase6-like	-	no_errors	NUDT6	HGNC	ENSG00000170917				92	0	0	75	4	5.06329
FAT4	0	genome.wustl.edu	37	4	126371970	126371970	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	126371970	126371970	A	G	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.9799	p.T3267A	0.999	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				75	0	0	39	25	39.0625
HSPA4L	0	genome.wustl.edu	37	4	128722950	128722950	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	128722950	128722950	G	A	SNP	HSPA4L	ENST00000439123	human	ensembl	74_37	+1	known	silent	c.633	p.A211	1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA4L	HGNC	ENSG00000164070				66	0	0	33	11	25
UVSSA	0	genome.wustl.edu	37	4	1348573	1348573	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	1348573	1348573	G	A	SNP	UVSSA	ENST00000389851	human	ensembl	74_37	+1	known	missense	c.985	p.A329T	0.209	NULL	pfam_DUF2043,superfamily_ENTH_VHS	-	no_errors	UVSSA	HGNC	ENSG00000163945				37	0	0	55	4	6.77966
NKX3-2	0	genome.wustl.edu	37	4	13544093	13544093	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	13544093	13544093	C	T	SNP	NKX3-2	ENST00000382438	human	ensembl	74_37	-1	known	missense	c.526	p.A176T	0.001	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX3-2	HGNC	ENSG00000109705				26	0	0	26	17	39.5349
UCP1	0	genome.wustl.edu	37	4	141488942	141488942	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	141488942	141488942	C	T	SNP	UCP1	ENST00000262999	human	ensembl	74_37	-1	known	missense	c.316	p.G106R	0.085	superfamily_Mt_carrier_dom,prints_Mit_uncoupling	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_uncoupling	-	no_errors	UCP1	HGNC	ENSG00000109424				75	0	0	52	28	35
TBC1D9	0	genome.wustl.edu	37	4	141590148	141590148	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	141590148	141590148	C	T	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	missense	c.1511	p.R504H	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436				44	0	0	24	18	42.8571
HHIP	0	genome.wustl.edu	37	4	145568052	145568052	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	145568052	145568052	G	A	SNP	HHIP	ENST00000296575	human	ensembl	74_37	+1	known	silent	c.225	p.R75	0.976	pfam_Folate_rcpt-like	pfam_Folate_rcpt-like,superfamily_Quinoprot_gluc/sorb_DH,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HHIP	HGNC	ENSG00000164161				72	0	0	38	24	38.7097
OTUD4	0	genome.wustl.edu	37	4	146058966	146058966	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	146058966	146058966	G	A	SNP	OTUD4	ENST00000447906	human	ensembl	74_37	-1	known	silent	c.2961	p.S987	0.048	NULL	pfam_OTU,pfscan_OTU	-	no_errors	OTUD4	HGNC	ENSG00000164164				207	0	0	166	12	6.74157
OTUD4	0	genome.wustl.edu	37	4	146059006	146059006	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	146059006	146059006	G	A	SNP	OTUD4	ENST00000447906	human	ensembl	74_37	-1	known	missense	c.2921	p.T974I	0.392	NULL	pfam_OTU,pfscan_OTU	-	no_errors	OTUD4	HGNC	ENSG00000164164				204	0	0	171	20	10.4712
OTUD4	0	genome.wustl.edu	37	4	146059041	146059041	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	146059041	146059041	A	G	SNP	OTUD4	ENST00000447906	human	ensembl	74_37	-1	known	silent	c.2886	p.H962	0.001	NULL	pfam_OTU,pfscan_OTU	-	no_errors	OTUD4	HGNC	ENSG00000164164				194	0	0	161	14	8
NR3C2	0	genome.wustl.edu	37	4	149357500	149357500	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	149357500	149357500	G	A	SNP	NR3C2	ENST00000355292	human	ensembl	74_37	-1	known	silent	c.513	p.S171	0.369	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR3C2	HGNC	ENSG00000151623				165	0	0	103	37	26.4286
DCHS2	0	genome.wustl.edu	37	4	155254305	155254305	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	155254305	155254305	C	T	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	missense	c.1558	p.A520T	0.028	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410				45	0	0	42	16	27.5862
TKTL2	0	genome.wustl.edu	37	4	164394544	164394544	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	164394544	164394544	G	A	SNP	TKTL2	ENST00000280605	human	ensembl	74_37	-1	known	nonsense	c.343	p.R115*	0.001	pfam_Transketolase_N	pfam_Transketolase_N,pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,pfam_DH_E1,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	TKTL2	HGNC	ENSG00000151005				68	0	0	48	28	36.8421
DCTD	0	genome.wustl.edu	37	4	183815664	183815664	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	183815664	183815664	G	A	SNP	DCTD	ENST00000357067	human	ensembl	74_37	-1	known	silent	c.372	p.C124	0.935	pfam_CMP_dCMP_Zn-bd,superfamily_Cytidine_deaminase-like,pirsf_dCMP_deaminase	pfam_CMP_dCMP_Zn-bd,superfamily_Cytidine_deaminase-like,pirsf_dCMP_deaminase	-	no_errors	DCTD	HGNC	ENSG00000129187				40	0	0	29	24	45.283
WWC2	0	genome.wustl.edu	37	4	184166591	184166591	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	184166591	184166591	G	T	SNP	WWC2	ENST00000448232	human	ensembl	74_37	+1	known	missense	c.625	p.G209C	1.000	NULL	pfam_WW_dom,superfamily_C2_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWC2	HGNC	ENSG00000151718				22	0	0	16	3	15.7895
HSP90AA4P	0	genome.wustl.edu	37	4	190396334	190396334	+	RNA	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	190396334	190396334	T	G	SNP	HSP90AA4P	ENST00000378770	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HSP90AA4P	HGNC	ENSG00000205100				68	0	0	41	19	31.6667
WHSC1	0	genome.wustl.edu	37	4	1920186	1920186	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	1920186	1920186	C	T	SNP	WHSC1	ENST00000382891	human	ensembl	74_37	+1	known	missense	c.1246	p.P416S	0.011	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,pfam_HMG_box_dom,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_PWWP_dom,smart_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_HMG_box_dom	-	no_errors	WHSC1	HGNC	ENSG00000109685				45	0	0	29	23	44.2308
FAM193A	0	genome.wustl.edu	37	4	2659551	2659551	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	2659551	2659551	C	T	SNP	FAM193A	ENST00000324666	human	ensembl	74_37	+1	known	missense	c.460	p.R154C	1.000	NULL	NULL	-	no_errors	FAM193A	HGNC	ENSG00000125386				180	0	0	98	22	18.3333
PCDH7	0	genome.wustl.edu	37	4	30726135	30726135	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	30726135	30726135	G	A	SNP	PCDH7	ENST00000543491	human	ensembl	74_37	+1	known	missense	c.3091	p.V1031M	1.000	pfam_Protocadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH7	HGNC	ENSG00000169851				50	0	0	53	5	8.62069
HTT	0	genome.wustl.edu	37	4	3134560	3134560	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	3134560	3134560	G	A	SNP	HTT	ENST00000355072	human	ensembl	74_37	+1	known	silent	c.2415	p.A805	0.407	superfamily_ARM-type_fold	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386				171	0	0	95	31	24.6032
LRPAP1	0	genome.wustl.edu	37	4	3526763	3526763	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	3526763	3526763	C	T	SNP	LRPAP1	ENST00000500728	human	ensembl	74_37	-1	known	missense	c.220	p.V74M	0.986	pfam_MG_RAP_rcpt_1,superfamily_MG_RAP_rcpt_1	pfam_Alpha_2_MRAP_C,pfam_MG_RAP_rcpt_1,superfamily_MG_RAP_rcpt_1	-	no_errors	LRPAP1	HGNC	ENSG00000163956				162	0	0	94	48	33.8028
ARAP2	0	genome.wustl.edu	37	4	36161102	36161102	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	36161102	36161102	G	A	SNP	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	missense	c.2468	p.P823L	0.701	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365				107	0	0	65	37	36.2745
WDR19	0	genome.wustl.edu	37	4	39230289	39230289	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	39230289	39230289	C	T	SNP	WDR19	ENST00000399820	human	ensembl	74_37	+1	known	missense	c.1961	p.A654V	0.960	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR19	HGNC	ENSG00000157796				120	0	0	77	35	31.25
RFC1	0	genome.wustl.edu	37	4	39293450	39293450	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	39293450	39293450	C	T	SNP	RFC1	ENST00000381897	human	ensembl	74_37	-1	known	missense	c.2980	p.V994I	0.603	pfam_DNA_replication_fac_RFC1_C,pirsf_DNA_replication_fac_C_lsu	pfam_DNA_replication_fac_RFC1_C,pfam_BRCT_dom,pfam_ATPase_AAA_core,superfamily_DNA_pol3_clamp-load_cplx_C,superfamily_P-loop_NTPase,superfamily_BRCT_dom,smart_BRCT_dom,smart_AAA+_ATPase,pirsf_DNA_replication_fac_C_lsu,pfscan_BRCT_dom	-	no_errors	RFC1	HGNC	ENSG00000035928				78	0	0	45	19	29.6875
KCTD8	0	genome.wustl.edu	37	4	44450516	44450516	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	44450516	44450516	C	T	SNP	KCTD8	ENST00000360029	human	ensembl	74_37	-1	known	missense	c.25	p.G9S	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD8	HGNC	ENSG00000183783				35	0	0	26	12	31.5789
MSX1	0	genome.wustl.edu	37	4	4864628	4864628	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	4864628	4864628	C	T	SNP	MSX1	ENST00000382723	human	ensembl	74_37	+1	known	missense	c.670	p.R224C	0.995	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	MSX1	HGNC	ENSG00000163132				72	0	0	39	22	36.0656
PDGFRA	0	genome.wustl.edu	37	4	55146512	55146512	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	55146512	55146512	G	T	SNP	PDGFRA	ENST00000257290	human	ensembl	74_37	+1	known	missense	c.2186	p.G729V	0.797	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRA	HGNC	ENSG00000134853				67	0	0	24	21	46.6667
JAKMIP1	0	genome.wustl.edu	37	4	6107538	6107538	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	6107538	6107538	C	T	SNP	JAKMIP1	ENST00000409021	human	ensembl	74_37	-1	known	missense	c.286	p.E96K	1.000	NULL	NULL	-	no_errors	JAKMIP1	HGNC	ENSG00000152969				41	0	0	24	17	41.4634
LPHN3	0	genome.wustl.edu	37	4	62598963	62598963	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	62598963	62598963	C	T	SNP	LPHN3	ENST00000507625	human	ensembl	74_37	+1	known	missense	c.1090	p.R364W	0.992	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC	ENSG00000150471				31	0	0	31	14	31.1111
PPP2R2C	0	genome.wustl.edu	37	4	6374306	6374306	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	6374306	6374306	G	A	SNP	PPP2R2C	ENST00000335585	human	ensembl	74_37	-1	known	missense	c.569	p.S190L	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2C	HGNC	ENSG00000074211				155	0	0	97	49	33.5616
TMPRSS11F	0	genome.wustl.edu	37	4	68964641	68964641	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	68964641	68964641	T	A	SNP	TMPRSS11F	ENST00000356291	human	ensembl	74_37	-1	known	missense	c.127	p.I43F	1.000	pirsf_Pept_S1A_HAT/DESC1	pirsf_Pept_S1A_HAT/DESC1,pfam_Peptidase_S1,pfam_SEA_dom,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_SEA_dom,pfscan_Peptidase_S1	-	no_errors	TMPRSS11F	HGNC	ENSG00000198092				91	0	0	46	19	29.2308
UGT2B28	0	genome.wustl.edu	37	4	70152481	70152481	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	70152481	70152481	A	G	SNP	UGT2B28	ENST00000335568	human	ensembl	74_37	+1	known	silent	c.882	p.E294	0.999	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B28	HGNC	ENSG00000135226				234	1	0.425532	181	10	5.2356
COX18	0	genome.wustl.edu	37	4	73930979	73930979	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	73930979	73930979	C	T	SNP	COX18	ENST00000295890	human	ensembl	74_37	-1	known	missense	c.586	p.A196T	0.000	pfam_Membrane_insert_OXA1/ALB3/YidC	pfam_Membrane_insert_OXA1/ALB3/YidC	-	no_errors	COX18	HGNC	ENSG00000163626				83	0	0	37	22	37.2881
ANKRD17	0	genome.wustl.edu	37	4	73956848	73956848	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	73956848	73956848	C	T	SNP	ANKRD17	ENST00000358602	human	ensembl	74_37	-1	known	missense	c.6497	p.C2166Y	0.807	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKRD17	HGNC	ENSG00000132466				257	0	0	139	76	35.3488
ANKRD17	0	genome.wustl.edu	37	4	74021806	74021806	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	74021806	74021806	T	C	SNP	ANKRD17	ENST00000358602	human	ensembl	74_37	-1	known	missense	c.782	p.N261S	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKRD17	HGNC	ENSG00000132466				80	0	0	37	21	36.2069
SEC31A	0	genome.wustl.edu	37	4	83799934	83799934	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	83799934	83799934	C	T	SNP	SEC31A	ENST00000432794	human	ensembl	74_37	-1	known	silent	c.351	p.Q117	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31A	HGNC	ENSG00000138674				114	0	0	46	21	31.3433
PTPN13	0	genome.wustl.edu	37	4	87662887	87662887	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	87662887	87662887	T	C	SNP	PTPN13	ENST00000436978	human	ensembl	74_37	+1	known	missense	c.2405	p.V802A	1.000	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_FERM_PH-like_C,pfscan_FERM_domain	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629				23	0	0	21	7	25
PTPN13	0	genome.wustl.edu	37	4	87735693	87735693	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	87735693	87735693	C	A	SNP	PTPN13	ENST00000436978	human	ensembl	74_37	+1	known	missense	c.7462	p.L2488I	0.120	pirsf_Tyr_Pase_non-rcpt_typ-13	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629				45	0	0	29	13	30.9524
PKD2	0	genome.wustl.edu	37	4	88996024	88996024	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	88996024	88996024	C	T	SNP	PKD2	ENST00000237596	human	ensembl	74_37	+1	known	silent	c.2583	p.D861	0.992	prints_PKD_2	pfam_PKD1_2_channel,pfam_Ion_trans_dom,pfscan_EF_hand_dom,prints_PKD_2,prints_PKD_1	-	no_errors	PKD2	HGNC	ENSG00000118762				118	1	0.840336	61	44	41.9048
HERC5	0	genome.wustl.edu	37	4	89415436	89415436	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	89415436	89415436	A	G	SNP	HERC5	ENST00000264350	human	ensembl	74_37	+1	known	missense	c.2398	p.M800V	0.022	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_RCC1/BLIP-II,superfamily_Haem_Oase-like_multi-hlx,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC5	HGNC	ENSG00000138646				56	0	0	17	9	34.6154
FAM13A	0	genome.wustl.edu	37	4	89658707	89658707	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	89658707	89658707	C	A	SNP	FAM13A	ENST00000264344	human	ensembl	74_37	-1	known	splice_site	c.2563-1	e21-1	1.000	-	-	-	no_errors	FAM13A	HGNC	ENSG00000138640				81	0	0	53	15	22.0588
GRID2	0	genome.wustl.edu	37	4	94316824	94316824	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	94316824	94316824	A	G	SNP	GRID2	ENST00000282020	human	ensembl	74_37	+1	known	missense	c.1312	p.M438V	1.000	superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208				129	0	0	84	18	17.6471
DGKQ	0	genome.wustl.edu	37	4	960274	960274	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	960274	960274	G	A	SNP	DGKQ	ENST00000273814	human	ensembl	74_37	-1	known	missense	c.1408	p.R470W	0.647	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ras-assoc,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ras-assoc,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKQ	HGNC	ENSG00000145214				62	0	0	41	21	33.871
SLCO4C1	0	genome.wustl.edu	37	5	101631744	101631744	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	101631744	101631744	G	A	SNP	SLCO4C1	ENST00000310954	human	ensembl	74_37	-1	known	missense	c.223	p.L75F	0.000	NULL	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO4C1	HGNC	ENSG00000173930				96	0	0	64	40	38.4615
SLC12A7	0	genome.wustl.edu	37	5	1089189	1089189	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	1089189	1089189	G	T	SNP	SLC12A7	ENST00000264930	human	ensembl	74_37	-1	known	missense	c.397	p.L133M	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A7	HGNC	ENSG00000113504				136	0	0	141	10	6.62252
KCNN2	0	genome.wustl.edu	37	5	113698585	113698585	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	113698585	113698585	C	T	SNP	KCNN2	ENST00000264773	human	ensembl	74_37	+1	known	missense	c.113	p.A38V	0.055	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN2	HGNC	ENSG00000080709				14	0	0	18	16	47.0588
CTNND2	0	genome.wustl.edu	37	5	11384986	11384986	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	11384986	11384986	G	A	SNP	CTNND2	ENST00000304623	human	ensembl	74_37	-1	known	missense	c.968	p.S323L	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND2	HGNC	ENSG00000169862				25	0	0	21	12	36.3636
ATG12	0	genome.wustl.edu	37	5	115177372	115177372	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	115177372	115177372	G	A	SNP	ATG12	ENST00000274459	human	ensembl	74_37	-1	known	nonsense	c.19	p.Q7*	0.000	NULL	pfam_Atg12,pfam_Atg8_fam	-	no_errors	ATG12	HGNC	ENSG00000145782				124	0	0	80	49	37.9845
AQPEP	0	genome.wustl.edu	37	5	115298779	115298779	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	115298779	115298779	C	T	SNP	AQPEP	ENST00000357872	human	ensembl	74_37	+1	known	silent	c.465	p.R155	0.009	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	AQPEP	Uniprot_gn	ENSG00000172901				62	0	0	65	4	5.7971
FTMT	0	genome.wustl.edu	37	5	121188080	121188080	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	121188080	121188080	G	A	SNP	FTMT	ENST00000321339	human	ensembl	74_37	+1	known	missense	c.422	p.R141H	0.999	pfam_Ferritin_DPS_dom,superfamily_Ferritin-like_SF,pfscan_Ferritin-like_diiron	pfam_Ferritin_DPS_dom,superfamily_Ferritin-like_SF,pfscan_Ferritin-like_diiron	-	no_errors	FTMT	HGNC	ENSG00000181867				113	0	0	95	47	33.0986
LOX	0	genome.wustl.edu	37	5	121413317	121413317	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	121413317	121413317	G	A	SNP	LOX	ENST00000231004	human	ensembl	74_37	-1	known	missense	c.364	p.R122C	1.000	NULL	pfam_Lysyl_oxidase,prints_Lysyl_oxidase	-	no_errors	LOX	HGNC	ENSG00000113083				35	0	0	29	16	35.5556
SHROOM1	0	genome.wustl.edu	37	5	132158995	132158995	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	132158995	132158995	G	A	SNP	SHROOM1	ENST00000378679	human	ensembl	74_37	-1	known	missense	c.2173	p.R725C	1.000	pfam_ASD2	pfam_ASD2,pfam_ASD1	-	no_errors	SHROOM1	HGNC	ENSG00000164403				37	0	0	42	18	30
FSTL4	0	genome.wustl.edu	37	5	132545909	132545909	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	132545909	132545909	C	T	SNP	FSTL4	ENST00000265342	human	ensembl	74_37	-1	known	missense	c.1690	p.V564M	0.361	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Kazal_dom,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL4	HGNC	ENSG00000053108				43	0	0	31	17	35.4167
TCF7	0	genome.wustl.edu	37	5	133481970	133481970	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	133481970	133481970	G	A	SNP	TCF7	ENST00000432532	human	ensembl	74_37	+1	known	missense	c.859	p.V287I	1.000	NULL	pfam_HMG_box_dom,pfam_CTNNB1-bd_N,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7	HGNC	ENSG00000081059				241	0	0	119	67	36.0215
PITX1	0	genome.wustl.edu	37	5	134364669	134364669	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	134364669	134364669	T	C	SNP	PITX1	ENST00000265340	human	ensembl	74_37	-1	known	missense	c.745	p.T249A	1.000	pirsf_Homeobox_Pitx/unc30	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PITX1	HGNC	ENSG00000069011				79	0	0	34	39	53.4247
NEUROG1	0	genome.wustl.edu	37	5	134870907	134870907	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	134870907	134870907	G	A	SNP	NEUROG1	ENST00000314744	human	ensembl	74_37	-1	known	silent	c.474	p.G158	0.002	superfamily_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	NEUROG1	HGNC	ENSG00000181965				44	0	0	38	18	32.1429
TRPC7	0	genome.wustl.edu	37	5	135692718	135692718	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	135692718	135692718	G	A	SNP	TRPC7	ENST00000513104	human	ensembl	74_37	-1	known	missense	c.358	p.R120C	1.000	superfamily_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC7_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC7	HGNC	ENSG00000069018				53	0	0	60	24	28.5714
LRRTM2	0	genome.wustl.edu	37	5	138208851	138208851	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	138208851	138208851	G	T	SNP	LRRTM2	ENST00000274711	human	ensembl	74_37	-1	known	missense	c.1399	p.L467I	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM2	HGNC	ENSG00000146006				98	0	0	70	32	31.3725
PAIP2	0	genome.wustl.edu	37	5	138700290	138700290	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	138700290	138700290	G	A	SNP	PAIP2	ENST00000265192	human	ensembl	74_37	+1	known	missense	c.176	p.R59H	1.000	NULL	pfam_Ataxin-2_C	-	no_errors	PAIP2	HGNC	ENSG00000120727				67	0	0	26	11	29.7297
DNAJC18	0	genome.wustl.edu	37	5	138773104	138773104	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	138773104	138773104	C	T	SNP	DNAJC18	ENST00000302060	human	ensembl	74_37	-1	known	missense	c.184	p.G62R	0.957	NULL	pfam_DUF1977_DnaJ-like,pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC18	HGNC	ENSG00000170464				83	0	0	43	27	38.5714
DNAH5	0	genome.wustl.edu	37	5	13885313	13885313	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	13885313	13885313	T	C	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.2768	p.D923G	0.041	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				62	0	0	23	19	45.2381
NDUFA2	0	genome.wustl.edu	37	5	140027106	140027106	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140027106	140027106	G	A	SNP	NDUFA2	ENST00000252102	human	ensembl	74_37	-1	known	silent	c.63	p.I21	1.000	superfamily_Thioredoxin-like_fold,pirsf_NADH_Ub_cplx-1_asu_su-2	pfam_Ribosome/NADH_DH,superfamily_Thioredoxin-like_fold,smart_Ribosome/NADH_DH,pirsf_NADH_Ub_cplx-1_asu_su-2	-	no_errors	NDUFA2	HGNC	ENSG00000131495				41	0	0	30	19	38.7755
HARS2	0	genome.wustl.edu	37	5	140077214	140077214	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140077214	140077214	A	G	SNP	HARS2	ENST00000230771	human	ensembl	74_37	+1	known	missense	c.1258	p.N420D	1.000	pfam_Anticodon-bd,superfamily_Anticodon-bd,pirsf_HisRS/HisZ,tigrfam_His-tRNA-ligase	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,superfamily_Anticodon-bd,pirsf_HisRS/HisZ,pfscan_aa-tRNA-synth_II,tigrfam_His-tRNA-ligase	-	no_errors	HARS2	HGNC	ENSG00000112855				144	0	0	69	39	36.1111
PCDHA3	0	genome.wustl.edu	37	5	140182243	140182243	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140182243	140182243	C	T	SNP	PCDHA3	ENST00000522353	human	ensembl	74_37	+1	known	silent	c.1461	p.N487	0.997	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA3	HGNC	ENSG00000255408				226	0	0	195	81	29.3478
PCDHA4	0	genome.wustl.edu	37	5	140188216	140188216	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140188216	140188216	G	A	SNP	PCDHA4	ENST00000530339	human	ensembl	74_37	+1	known	missense	c.1444	p.A482T	0.871	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA4	HGNC	ENSG00000204967				131	0	0	109	50	31.4465
PCDHA7	0	genome.wustl.edu	37	5	140215247	140215247	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140215247	140215247	G	A	SNP	PCDHA7	ENST00000525929	human	ensembl	74_37	+1	known	missense	c.1279	p.A427T	0.992	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963				242	0	0	153	95	38.3065
PCDHA11	0	genome.wustl.edu	37	5	140250554	140250554	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140250554	140250554	C	T	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	silent	c.1866	p.R622	0.973	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158				85	0	0	111	55	33.1325
PCDHA12	0	genome.wustl.edu	37	5	140256852	140256852	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140256852	140256852	G	A	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	missense	c.1795	p.A599T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664				116	0	0	127	67	34.5361
PCDHA13	0	genome.wustl.edu	37	5	140263524	140263524	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140263524	140263524	C	T	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	silent	c.1671	p.D557	0.716	superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389				185	1	0.537634	170	91	34.8659
PCDHB2	0	genome.wustl.edu	37	5	140475274	140475274	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140475274	140475274	G	A	SNP	PCDHB2	ENST00000194155	human	ensembl	74_37	+1	known	silent	c.900	p.S300	0.147	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB2	HGNC	ENSG00000112852				104	0	0	58	26	30.9524
PCDHB7	0	genome.wustl.edu	37	5	140553683	140553683	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140553683	140553683	G	A	SNP	PCDHB7	ENST00000231137	human	ensembl	74_37	+1	known	missense	c.1267	p.V423I	0.958	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212				142	0	0	116	61	34.4633
PCDHB12	0	genome.wustl.edu	37	5	140589878	140589878	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140589878	140589878	G	A	SNP	PCDHB12	ENST00000239450	human	ensembl	74_37	+1	known	missense	c.1399	p.A467T	0.981	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328				217	0	0	217	105	32.6087
PCDHB13	0	genome.wustl.edu	37	5	140594150	140594150	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140594150	140594150	C	T	SNP	PCDHB13	ENST00000341948	human	ensembl	74_37	+1	known	missense	c.455	p.T152M	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB13	HGNC	ENSG00000187372				133	0	0	68	39	36.4486
PCDHB18	0	genome.wustl.edu	37	5	140616147	140616147	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140616147	140616147	C	T	SNP	PCDHB18	ENST00000526308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PCDHB18	HGNC	ENSG00000146001				109	0	0	103	55	34.8101
PCDHB15	0	genome.wustl.edu	37	5	140626476	140626476	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140626476	140626476	G	A	SNP	PCDHB15	ENST00000231173	human	ensembl	74_37	+1	known	missense	c.1330	p.V444I	0.998	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB15	HGNC	ENSG00000113248				180	1	0.552486	155	88	36.214
PCDHGA1	0	genome.wustl.edu	37	5	140712338	140712338	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140712338	140712338	C	T	SNP	PCDHGA1	ENST00000517417	human	ensembl	74_37	+1	known	missense	c.2087	p.A696V	0.999	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956				205	1	0.485437	184	64	25.8065
PCDHGA6	0	genome.wustl.edu	37	5	140755314	140755314	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140755314	140755314	A	G	SNP	PCDHGA6	ENST00000517434	human	ensembl	74_37	+1	known	missense	c.1664	p.Q555R	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA6	HGNC	ENSG00000253731				237	1	0.420168	256	79	23.5821
PCDHGA9	0	genome.wustl.edu	37	5	140784685	140784685	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	140784685	140784685	G	A	SNP	PCDHGA9	ENST00000573521	human	ensembl	74_37	+1	known	silent	c.2166	p.S722	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA9	HGNC	ENSG00000261934				78	0	0	80	5	5.88235
SPINK5	0	genome.wustl.edu	37	5	147505095	147505095	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	147505095	147505095	C	T	SNP	SPINK5	ENST00000359874	human	ensembl	74_37	+1	known	silent	c.2748	p.C916	0.915	NULL	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK5	HGNC	ENSG00000133710				26	0	0	33	8	19.5122
SLC36A1	0	genome.wustl.edu	37	5	150847278	150847278	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	150847278	150847278	C	T	SNP	SLC36A1	ENST00000243389	human	ensembl	74_37	+1	known	missense	c.515	p.A172V	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC36A1	HGNC	ENSG00000123643				137	0	0	79	43	35.2459
SGCD	0	genome.wustl.edu	37	5	155771622	155771622	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	155771622	155771622	A	G	SNP	SGCD	ENST00000337851	human	ensembl	74_37	+1	known	missense	c.127	p.M43V	1.000	pfam_Sarcoglycan	pfam_Sarcoglycan	-	no_errors	SGCD	HGNC	ENSG00000170624				80	0	0	53	24	31.1688
SOX30	0	genome.wustl.edu	37	5	157065329	157065329	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	157065329	157065329	G	T	SNP	SOX30	ENST00000265007	human	ensembl	74_37	-1	known	missense	c.1789	p.L597I	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX30	HGNC	ENSG00000039600				46	0	0	30	19	38.7755
ENSG00000253798	0	genome.wustl.edu	37	5	157117231	157117231	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	157117231	157117231	G	A	SNP	ENSG00000253798	ENST00000522076	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	AC008694.3	Clone_based_vega_gene	ENSG00000253798				82	0	0	49	32	39.5062
FBXL7	0	genome.wustl.edu	37	5	15937257	15937257	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	15937257	15937257	C	T	SNP	FBXL7	ENST00000504595	human	ensembl	74_37	+1	known	missense	c.1438	p.R480C	1.000	NULL	pfam_Leu-rich_rpt,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL7	HGNC	ENSG00000183580				18	0	0	17	13	43.3333
STC2	0	genome.wustl.edu	37	5	172750373	172750373	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	172750373	172750373	C	T	SNP	STC2	ENST00000265087	human	ensembl	74_37	-1	known	missense	c.355	p.G119S	1.000	pfam_Stanniocalcin	pfam_Stanniocalcin	-	no_errors	STC2	HGNC	ENSG00000113739				37	0	0	30	14	31.8182
BOD1	0	genome.wustl.edu	37	5	173036595	173036595	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	173036595	173036595	G	A	SNP	BOD1	ENST00000471339	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BOD1	HGNC	ENSG00000145919				8	0	0	5	5	50
HK3	0	genome.wustl.edu	37	5	176314250	176314250	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	176314250	176314250	G	A	SNP	HK3	ENST00000292432	human	ensembl	74_37	-1	known	silent	c.1689	p.S563	0.575	pfam_Hexokinase_N	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK3	HGNC	ENSG00000160883				82	0	0	54	26	32.5
DDX41	0	genome.wustl.edu	37	5	176940764	176940764	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	176940764	176940764	G	T	SNP	DDX41	ENST00000507955	human	ensembl	74_37	-1	known	nonsense	c.1020	p.Y340*	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_CCHC,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX41	HGNC	ENSG00000183258				90	0	0	87	7	7.44681
RMND5B	0	genome.wustl.edu	37	5	177571054	177571054	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	177571054	177571054	G	A	SNP	RMND5B	ENST00000313386	human	ensembl	74_37	+1	known	silent	c.639	p.L213	1.000	smart_CRA_dom	smart_LisH_dimerisation,smart_CTLH_C,smart_CRA_dom,pfscan_LisH_dimerisation,pfscan_CTLH_C	-	no_errors	RMND5B	HGNC	ENSG00000145916				97	0	0	64	44	40.7407
ZNF354A	0	genome.wustl.edu	37	5	178154086	178154086	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	178154086	178154086	C	T	SNP	ZNF354A	ENST00000335815	human	ensembl	74_37	-1	known	missense	c.74	p.R25Q	0.992	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF354A	HGNC	ENSG00000169131				88	0	0	70	35	33.3333
GRM6	0	genome.wustl.edu	37	5	178410152	178410152	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	178410152	178410152	G	A	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	missense	c.2195	p.T732M	0.991	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_4	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262				74	0	0	50	24	32.4324
CANX	0	genome.wustl.edu	37	5	179132840	179132840	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	179132840	179132840	C	A	SNP	CANX	ENST00000415618	human	ensembl	74_37	+1	known	missense	c.263	p.P88H	0.999	NULL	pfam_Calret/calnex,superfamily_ConA-like_lec_gl_sf,superfamily_Calreticulin/calnexin_P_dom,prints_Calret/calnex	-	no_errors	CANX	HGNC	ENSG00000127022				195	0	0	98	59	37.5796
FLT4	0	genome.wustl.edu	37	5	180047278	180047278	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	180047278	180047278	G	T	SNP	FLT4	ENST00000261937	human	ensembl	74_37	-1	known	missense	c.2437	p.L813M	1.000	superfamily_Kinase-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR3_rcpt	-	no_errors	FLT4	HGNC	ENSG00000037280				166	0	0	111	35	23.9726
FLT4	0	genome.wustl.edu	37	5	180052971	180052971	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	180052971	180052971	C	T	SNP	FLT4	ENST00000261937	human	ensembl	74_37	-1	known	missense	c.1319	p.R440H	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR3_rcpt	-	no_errors	FLT4	HGNC	ENSG00000037280				124	0	0	84	49	36.8421
PLEKHG4B	0	genome.wustl.edu	37	5	182187	182187	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	182187	182187	T	C	SNP	PLEKHG4B	ENST00000283426	human	ensembl	74_37	+1	known	missense	c.3565	p.S1189P	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG4B	HGNC	ENSG00000153404				163	1	0.609756	107	53	33.125
CDH18	0	genome.wustl.edu	37	5	19473685	19473685	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	19473685	19473685	C	A	SNP	CDH18	ENST00000274170	human	ensembl	74_37	-1	known	missense	c.2023	p.A675S	1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH18	HGNC	ENSG00000145526				133	0	0	94	47	33.3333
SDHA	0	genome.wustl.edu	37	5	235283	235283	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	235283	235283	C	T	SNP	SDHA	ENST00000264932	human	ensembl	74_37	+1	known	silent	c.1089	p.H363	0.988	pfam_FAD_bind_dom,superfamily_Succ_DH/fumarate_Rdtase_cat,tigrfam_Succ_DH_flav_su_fwd,tigrfam_Succ_Dhase_FrdA_Gneg	pfam_FAD_bind_dom,pfam_Fum_Rdtase/Succ_DH_flav-like_C,superfamily_Succ_DH/fumarate_Rdtase_cat,superfamily_Fum_Rdtase/Succ_DH_flav-like_C,tigrfam_Succ_DH_flav_su_fwd,tigrfam_Succ_Dhase_FrdA_Gneg	-	no_errors	SDHA	HGNC	ENSG00000073578				58	0	0	51	29	36.25
PDZD2	0	genome.wustl.edu	37	5	31983413	31983413	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	31983413	31983413	C	T	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.629	p.A210V	0.001	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401				101	0	0	74	42	36.2069
RAI14	0	genome.wustl.edu	37	5	34823757	34823757	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	34823757	34823757	G	A	SNP	RAI14	ENST00000515799	human	ensembl	74_37	+1	known	missense	c.1819	p.A607T	0.999	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_t-SNARE,superfamily_UBA-like,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	RAI14	HGNC	ENSG00000039560				72	0	0	46	5	9.80392
NIPBL	0	genome.wustl.edu	37	5	36985440	36985440	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	36985440	36985440	G	T	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.2158	p.G720W	0.165	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				100	0	0	89	51	36.4286
NUP155	0	genome.wustl.edu	37	5	37314390	37314390	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	37314390	37314390	C	T	SNP	NUP155	ENST00000231498	human	ensembl	74_37	-1	known	silent	c.2346	p.Q782	1.000	pfam_Nucleoporin_Nup133/Nup155_C	pfam_Nucleoporin_Nup133/Nup155_C,pfam_Nucleoporin_Nup133/Nup155_N,superfamily_WD40_repeat_dom	-	no_errors	NUP155	HGNC	ENSG00000113569				71	0	0	41	16	28.0702
ENSG00000272234	0	genome.wustl.edu	37	5	42806957	42806957	+	RNA	SNP	T	T	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	42806957	42806957	T	A	SNP	ENSG00000272234	ENST00000606056	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2325A15.5	Clone_based_vega_gene	ENSG00000272234				33	0	0	5	4	44.4444
ADAMTS16	0	genome.wustl.edu	37	5	5303508	5303508	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	5303508	5303508	C	T	SNP	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	missense	c.2917	p.P973S	0.998	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536				12	0	0	14	8	36.3636
SNX18	0	genome.wustl.edu	37	5	53814902	53814902	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	53814902	53814902	G	T	SNP	SNX18	ENST00000326277	human	ensembl	74_37	+1	known	missense	c.1120	p.V374F	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pirsf_Snx9,pfscan_Phox	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX18	HGNC	ENSG00000178996				56	0	0	36	22	37.931
SNX18	0	genome.wustl.edu	37	5	53815132	53815132	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	53815132	53815132	C	T	SNP	SNX18	ENST00000326277	human	ensembl	74_37	+1	known	silent	c.1350	p.N450	1.000	pfam_Sorting_nexin_WASP-bd-dom,pirsf_Snx9	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX18	HGNC	ENSG00000178996				84	0	0	63	30	32.2581
GZMK	0	genome.wustl.edu	37	5	54327395	54327395	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	54327395	54327395	C	T	SNP	GZMK	ENST00000231009	human	ensembl	74_37	+1	known	silent	c.567	p.G189	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	GZMK	HGNC	ENSG00000113088				92	0	0	56	20	26.3158
KIAA0947	0	genome.wustl.edu	37	5	5463611	5463611	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	5463611	5463611	C	T	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	silent	c.4164	p.C1388	0.000	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151				16	0	0	19	5	20.8333
GPBP1	0	genome.wustl.edu	37	5	56531794	56531794	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	56531794	56531794	C	T	SNP	GPBP1	ENST00000424459	human	ensembl	74_37	+1	known	missense	c.413	p.P138L	0.998	NULL	NULL	-	no_errors	GPBP1	HGNC	ENSG00000062194				100	0	0	44	9	16.9811
SV2C	0	genome.wustl.edu	37	5	75427714	75427714	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	75427714	75427714	A	T	SNP	SV2C	ENST00000502798	human	ensembl	74_37	+1	known	missense	c.139	p.S47C	1.000	superfamily_MFS_dom_general_subst_transpt,tigrfam_SV2	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2C	HGNC	ENSG00000122012				96	0	0	64	37	36.6337
CKMT2	0	genome.wustl.edu	37	5	80550808	80550808	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	80550808	80550808	G	A	SNP	CKMT2	ENST00000515615	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.399	-	-	-	no_errors	CKMT2	HGNC	ENSG00000131730				77	0	0	50	23	31.5068
NR2F1	0	genome.wustl.edu	37	5	92923833	92923833	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	92923833	92923833	G	A	SNP	NR2F1	ENST00000327111	human	ensembl	74_37	+1	known	missense	c.674	p.R225H	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_COUP_TF,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_COUP_TF,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	NR2F1	HGNC	ENSG00000175745				118	0	0	93	40	30.0752
NR2F1	0	genome.wustl.edu	37	5	92929431	92929431	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	92929431	92929431	C	T	SNP	NR2F1	ENST00000327111	human	ensembl	74_37	+1	known	silent	c.1155	p.I385	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,prints_COUP_TF,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_COUP_TF,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	NR2F1	HGNC	ENSG00000175745				149	0	0	95	59	38.3117
FAM81B	0	genome.wustl.edu	37	5	94782294	94782294	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	94782294	94782294	G	A	SNP	FAM81B	ENST00000283357	human	ensembl	74_37	+1	known	missense	c.922	p.E308K	0.918	NULL	NULL	-	no_errors	FAM81B	HGNC	ENSG00000153347				24	0	0	18	9	33.3333
RHOBTB3	0	genome.wustl.edu	37	5	95067805	95067805	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	95067805	95067805	G	A	SNP	RHOBTB3	ENST00000506817	human	ensembl	74_37	+1	putative	missense	c.245	p.C82Y	0.919	NULL	NULL	-	no_errors	RHOBTB3	HGNC	ENSG00000164292				27	0	0	30	9	23.0769
SIM1	0	genome.wustl.edu	37	6	100896062	100896062	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	100896062	100896062	G	A	SNP	SIM1	ENST00000262901	human	ensembl	74_37	-1	known	silent	c.810	p.H270	1.000	pfam_PAS_fold_3,superfamily_PAS,smart_PAS,pfscan_PAS	pfam_SIM_C,pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	SIM1	HGNC	ENSG00000112246				34	0	0	24	11	31.4286
GRIK2	0	genome.wustl.edu	37	6	102134229	102134229	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	102134229	102134229	G	A	SNP	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	splice_site	c.951+1	e6+1	1.000	-	-	-	no_errors	GRIK2	HGNC	ENSG00000164418				82	0	0	40	20	33.3333
GRIK2	0	genome.wustl.edu	37	6	102483233	102483233	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	102483233	102483233	G	A	SNP	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	silent	c.2103	p.T701	0.019	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418				83	0	0	62	22	26.1905
SMPD2	0	genome.wustl.edu	37	6	109764884	109764884	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	109764884	109764884	G	A	SNP	SMPD2	ENST00000258052	human	ensembl	74_37	+1	known	missense	c.1048	p.A350T	0.000	NULL	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	SMPD2	HGNC	ENSG00000135587				83	0	0	47	26	35.6164
METTL24	0	genome.wustl.edu	37	6	110636677	110636677	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	110636677	110636677	C	T	SNP	METTL24	ENST00000338882	human	ensembl	74_37	-1	known	missense	c.425	p.C142Y	0.989	NULL	NULL	-	no_errors	METTL24	HGNC	ENSG00000053328				112	0	0	45	24	34.7826
REV3L	0	genome.wustl.edu	37	6	111694065	111694065	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	111694065	111694065	G	A	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	silent	c.5493	p.D1831	1.000	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413				181	0	0	88	73	45.3416
FYN	0	genome.wustl.edu	37	6	112015695	112015695	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	112015695	112015695	A	G	SNP	FYN	ENST00000354650	human	ensembl	74_37	-1	known	missense	c.1156	p.Y386H	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	FYN	HGNC	ENSG00000010810				189	0	0	122	73	37.4359
HIVEP1	0	genome.wustl.edu	37	6	12123069	12123069	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	12123069	12123069	G	T	SNP	HIVEP1	ENST00000379388	human	ensembl	74_37	+1	known	missense	c.3041	p.R1014I	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP1	HGNC	ENSG00000095951				225	0	0	129	92	41.629
NKAIN2	0	genome.wustl.edu	37	6	124979530	124979530	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	124979530	124979530	G	A	SNP	NKAIN2	ENST00000368417	human	ensembl	74_37	+1	known	missense	c.472	p.A158T	1.000	pfam_Na/K-Atpase_Interacting	pfam_Na/K-Atpase_Interacting	-	no_errors	NKAIN2	HGNC	ENSG00000188580				50	0	0	42	24	36.3636
HDDC2	0	genome.wustl.edu	37	6	125621700	125621700	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	125621700	125621700	G	T	SNP	HDDC2	ENST00000398153	human	ensembl	74_37	-1	known	missense	c.190	p.R64S	0.002	pfam_HD_domain,smart_HD/PDEase_dom	pfam_HD_domain,smart_HD/PDEase_dom	-	no_errors	HDDC2	HGNC	ENSG00000111906				111	0	0	88	5	5.37634
NCOA7	0	genome.wustl.edu	37	6	126210197	126210197	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	126210197	126210197	C	T	SNP	NCOA7	ENST00000368357	human	ensembl	74_37	+1	known	nonsense	c.997	p.R333*	1.000	NULL	pfam_TLDc,pfam_LysM_dom,pfam_GRAM,smart_LysM_dom,smart_TLDc	-	no_errors	NCOA7	HGNC	ENSG00000111912				159	0	0	85	50	37.037
PTPRK	0	genome.wustl.edu	37	6	128404958	128404958	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	128404958	128404958	C	T	SNP	PTPRK	ENST00000368227	human	ensembl	74_37	-1	known	missense	c.1477	p.V493I	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRK	HGNC	ENSG00000152894				63	0	0	29	12	29.2683
AHI1	0	genome.wustl.edu	37	6	135811814	135811814	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	135811814	135811814	G	A	SNP	AHI1	ENST00000265602	human	ensembl	74_37	-1	known	missense	c.82	p.R28C	0.000	NULL	pfam_WD40_repeat,pfam_SH3_domain,pfam_SH3_2,superfamily_WD40_repeat_dom,superfamily_SH3_domain,smart_WD40_repeat,smart_SH3_domain,pfscan_SH3_domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_SH3_domain	-	no_errors	AHI1	HGNC	ENSG00000135541				123	0	0	69	38	35.514
RANBP9	0	genome.wustl.edu	37	6	13711196	13711196	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	13711196	13711196	G	C	SNP	RANBP9	ENST00000011619	human	ensembl	74_37	-1	known	missense	c.542	p.S181C	0.998	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_CTLH/CRA,pfam_LisH_dimerisation_subgr,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_LisH_dimerisation,smart_CTLH_C,smart_CRA_dom,pfscan_B30.2/SPRY,pfscan_LisH_dimerisation,pfscan_CTLH_C	-	no_errors	RANBP9	HGNC	ENSG00000010017				22	0	0	19	5	20.8333
PEX7	0	genome.wustl.edu	37	6	137191048	137191048	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	137191048	137191048	G	A	SNP	PEX7	ENST00000318471	human	ensembl	74_37	+1	known	silent	c.654	p.A218	0.960	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PEX7	HGNC	ENSG00000112357				360	0	0	175	94	34.9442
KIAA1244	0	genome.wustl.edu	37	6	138655927	138655927	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	138655927	138655927	G	A	SNP	KIAA1244	ENST00000251691	human	ensembl	74_37	+1	known	missense	c.5944	p.G1982S	0.000	NULL	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold,superfamily_Sec7_dom,smart_Sec7_dom	-	no_errors	KIAA1244	HGNC	ENSG00000112379				12	0	0	22	8	26.6667
HIVEP2	0	genome.wustl.edu	37	6	143094904	143094904	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	143094904	143094904	C	A	SNP	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	missense	c.972	p.K324N	1.000	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818				104	0	0	55	24	30.3797
PEX3	0	genome.wustl.edu	37	6	143793296	143793296	+	Splice_Site	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	143793296	143793296	G	T	SNP	PEX3	ENST00000367591	human	ensembl	74_37	+1	known	splice_site	c.579-1	e8-1	1.000	-	-	-	no_errors	PEX3	HGNC	ENSG00000034693				35	0	0	11	9	45
FBXO30	0	genome.wustl.edu	37	6	146127127	146127127	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	146127127	146127127	C	T	SNP	FBXO30	ENST00000237281	human	ensembl	74_37	-1	known	missense	c.415	p.A139T	1.000	NULL	pfam_F-box_dom,superfamily_F-box_dom,superfamily_TRAF-like,pfscan_F-box_dom,pfscan_Znf_TRAF	-	no_errors	FBXO30	HGNC	ENSG00000118496				159	0	0	70	28	28.5714
PLEKHG1	0	genome.wustl.edu	37	6	151153303	151153303	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	151153303	151153303	C	T	SNP	PLEKHG1	ENST00000358517	human	ensembl	74_37	+1	known	missense	c.3056	p.A1019V	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG1	HGNC	ENSG00000120278				125	0	0	84	52	38.2353
SYNE1	0	genome.wustl.edu	37	6	152529216	152529216	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	152529216	152529216	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.22715	p.A7572V	1.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				99	0	0	70	5	6.66667
SYNE1	0	genome.wustl.edu	37	6	152623082	152623082	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	152623082	152623082	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.17463	p.V5821	0.968	pfam_Spectrin_repeat,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				52	0	0	66	9	12
IGF2R	0	genome.wustl.edu	37	6	160479944	160479944	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	160479944	160479944	G	A	SNP	IGF2R	ENST00000356956	human	ensembl	74_37	+1	known	missense	c.2905	p.V969I	0.993	pfam_CIMR,superfamily_Man6P_isomerase_rcpt-bd_dom	pfam_CIMR,pfam_FN_type2_col-bd,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	-	no_errors	IGF2R	HGNC	ENSG00000197081				96	0	0	58	25	30.1205
SLC22A2	0	genome.wustl.edu	37	6	160679772	160679772	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	160679772	160679772	G	A	SNP	SLC22A2	ENST00000366953	human	ensembl	74_37	-1	known	silent	c.18	p.D6	1.000	NULL	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A2	HGNC	ENSG00000112499				43	0	0	42	24	36.3636
MLLT4	0	genome.wustl.edu	37	6	168363236	168363236	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	168363236	168363236	G	A	SNP	MLLT4	ENST00000366806	human	ensembl	74_37	+1	known	missense	c.4936	p.A1646T	1.000	NULL	pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	MLLT4	HGNC	ENSG00000130396				175	0	0	118	44	27.1605
WDR27	0	genome.wustl.edu	37	6	170089045	170089045	+	Silent	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	170089045	170089045	A	T	SNP	WDR27	ENST00000448612	human	ensembl	74_37	-1	known	silent	c.57	p.V19	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR27	HGNC	ENSG00000184465				45	0	0	37	15	28.8462
TBP	0	genome.wustl.edu	37	6	170871061	170871061	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	170871061	170871061	G	A	SNP	TBP	ENST00000230354	human	ensembl	74_37	+1	known	silent	c.237	p.Q79	0.988	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592				43	0	0	58	12	17.1429
ID4	0	genome.wustl.edu	37	6	19838301	19838301	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	19838301	19838301	C	T	SNP	ID4	ENST00000378700	human	ensembl	74_37	+1	known	silent	c.316	p.L106	1.000	superfamily_bHLH_dom,smart_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	ID4	HGNC	ENSG00000172201				23	0	0	20	15	42.8571
E2F3	0	genome.wustl.edu	37	6	20402537	20402537	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	20402537	20402537	T	C	SNP	E2F3	ENST00000346618	human	ensembl	74_37	+1	known	missense	c.74	p.V25A	0.999	NULL	pfam_E2F_TDP	-	no_errors	E2F3	HGNC	ENSG00000112242				32	0	0	35	17	32.6923
E2F3	0	genome.wustl.edu	37	6	20402541	20402541	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	20402541	20402541	C	T	SNP	E2F3	ENST00000346618	human	ensembl	74_37	+1	known	silent	c.78	p.A26	1.000	NULL	pfam_E2F_TDP	-	no_errors	E2F3	HGNC	ENSG00000112242				33	0	0	36	21	36.8421
E2F3	0	genome.wustl.edu	37	6	20402547	20402547	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	20402547	20402547	C	A	SNP	E2F3	ENST00000346618	human	ensembl	74_37	+1	known	silent	c.84	p.A28	1.000	NULL	pfam_E2F_TDP	-	no_errors	E2F3	HGNC	ENSG00000112242				33	0	0	52	12	18.75
BTN2A2	0	genome.wustl.edu	37	6	26384083	26384083	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	26384083	26384083	C	T	SNP	BTN2A2	ENST00000356709	human	ensembl	74_37	+1	known	missense	c.34	p.P12S	0.016	NULL	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTN2A2	HGNC	ENSG00000124508				123	0	0	77	54	41.2214
OR2B6	0	genome.wustl.edu	37	6	27925524	27925524	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	27925524	27925524	G	A	SNP	OR2B6	ENST00000244623	human	ensembl	74_37	+1	known	missense	c.506	p.C169Y	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2B6	HGNC	ENSG00000124657				159	0	0	102	35	25.5474
ZKSCAN4	0	genome.wustl.edu	37	6	28213039	28213039	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	28213039	28213039	C	T	SNP	ZKSCAN4	ENST00000377294	human	ensembl	74_37	-1	known	missense	c.1493	p.R498Q	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN4	HGNC	ENSG00000187626				100	0	0	54	27	33.3333
SCAND3	0	genome.wustl.edu	37	6	28540480	28540480	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	28540480	28540480	T	C	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	silent	c.3186	p.L1062	1.000	superfamily_RNaseH-like_dom	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040				120	0	0	54	31	36.4706
OR2H2	0	genome.wustl.edu	37	6	29556085	29556085	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	29556085	29556085	G	A	SNP	OR2H2	ENST00000383640	human	ensembl	74_37	+1	known	missense	c.364	p.V122M	0.995	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2H2	HGNC	ENSG00000204657				149	0	0	89	51	36.4286
ZNRD1	0	genome.wustl.edu	37	6	30030011	30030011	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	30030011	30030011	G	A	SNP	ZNRD1	ENST00000332435	human	ensembl	74_37	+1	known	missense	c.257	p.R86H	1.000	pfam_Znf_TFIIS,smart_Znf_TFIIS,pfscan_Znf_TFIIS	pfam_Znf_TFIIS,smart_Znf_TFIIS,pfscan_Znf_TFIIS	-	no_errors	ZNRD1	HGNC	ENSG00000066379				68	0	0	41	34	45.3333
TRIM26	0	genome.wustl.edu	37	6	30153692	30153692	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	30153692	30153692	C	T	SNP	TRIM26	ENST00000437089	human	ensembl	74_37	-1	known	nonsense	c.1581	p.W527*	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM26	HGNC	ENSG00000234127				52	0	0	41	4	8.88889
HLA-E	0	genome.wustl.edu	37	6	30457758	30457758	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	30457758	30457758	A	G	SNP	HLA-E	ENST00000376630	human	ensembl	74_37	+1	known	missense	c.320	p.N107S	0.989	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog,prints_MHC_I_a	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-E	HGNC	ENSG00000204592				107	0	0	80	54	40.2985
VARS	0	genome.wustl.edu	37	6	31746983	31746983	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	31746983	31746983	C	T	SNP	VARS	ENST00000375663	human	ensembl	74_37	-1	known	missense	c.3487	p.V1163M	0.915	superfamily_tRNAsynth_1a_anticodon-bd,tigrfam_Valyl-tRNA_ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Glutathione_S-Trfase_N,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_GST_C,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,superfamily_tRNA-bd_arm,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	-	no_errors	VARS	HGNC	ENSG00000204394				17	0	0	20	2	9.09091
HSPA1A	0	genome.wustl.edu	37	6	31785362	31785362	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	31785362	31785362	T	G	SNP	HSPA1A	ENST00000375651	human	ensembl	74_37	+1	known	missense	c.1829	p.L610R	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA1A	HGNC	ENSG00000204389				167	0	0	137	11	7.43243
HSPA1B	0	genome.wustl.edu	37	6	31797556	31797556	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	31797556	31797556	T	G	SNP	HSPA1B	ENST00000375650	human	ensembl	74_37	+1	known	missense	c.1829	p.L610R	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA1B	HGNC	ENSG00000204388				72	0	0	48	32	40
CYP21A2	0	genome.wustl.edu	37	6	32007841	32007841	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	32007841	32007841	G	A	SNP	CYP21A2	ENST00000418967	human	ensembl	74_37	+1	known	silent	c.798	p.A266	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP21A2	HGNC	ENSG00000231852				201	0	0	148	95	39.0947
TNXB	0	genome.wustl.edu	37	6	32017099	32017099	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	32017099	32017099	G	A	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	silent	c.9699	p.Y3233	0.946	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				76	0	0	44	25	36.2319
TNXB	0	genome.wustl.edu	37	6	32017224	32017224	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	32017224	32017224	C	T	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.9574	p.D3192N	0.987	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				128	0	0	76	27	26.2136
RGL2	0	genome.wustl.edu	37	6	33261421	33261421	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	33261421	33261421	G	A	SNP	RGL2	ENST00000497454	human	ensembl	74_37	-1	known	missense	c.1564	p.R522W	0.088	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL2	HGNC	ENSG00000237441				104	0	0	61	20	24.6914
ITPR3	0	genome.wustl.edu	37	6	33631649	33631649	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	33631649	33631649	C	T	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	silent	c.1140	p.F380	0.508	pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				64	0	0	51	24	32
ITPR3	0	genome.wustl.edu	37	6	33638232	33638232	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	33638232	33638232	C	T	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	missense	c.2320	p.R774C	1.000	prints_InsP3_rcpt-bd	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				147	0	0	100	54	35.0649
ITPR3	0	genome.wustl.edu	37	6	33641487	33641487	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	33641487	33641487	C	T	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	silent	c.3048	p.F1016	1.000	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				107	0	0	78	36	31.5789
GRM4	0	genome.wustl.edu	37	6	33995965	33995965	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	33995965	33995965	G	A	SNP	GRM4	ENST00000374181	human	ensembl	74_37	-1	known	missense	c.2621	p.T874M	0.945	prints_GPCR_3_mtglu_rcpt_4	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_4,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM4	HGNC	ENSG00000124493				73	0	0	45	26	36.6197
FAM50B	0	genome.wustl.edu	37	6	3850440	3850440	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	3850440	3850440	A	G	SNP	FAM50B	ENST00000380272	human	ensembl	74_37	+1	novel	missense	c.395	p.D132G	0.000	pfam_XAP5	pfam_XAP5	-	no_errors	FAM50B	HGNC	ENSG00000145945				38	0	0	57	4	6.55738
PTCHD4	0	genome.wustl.edu	37	6	47847178	47847178	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	47847178	47847178	C	T	SNP	PTCHD4	ENST00000339488	human	ensembl	74_37	-1	known	missense	c.1402	p.V468I	1.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD4	HGNC	ENSG00000244694				62	0	0	38	18	32.1429
CRISP1	0	genome.wustl.edu	37	6	49806157	49806157	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	49806157	49806157	T	G	SNP	CRISP1	ENST00000335847	human	ensembl	74_37	-1	known	missense	c.615	p.K205N	0.498	pfam_Cysteine_rich_secretory	pfam_Cysteine_rich_secretory,pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1,prints_V5_allergen	-	no_errors	CRISP1	HGNC	ENSG00000124812				100	1	0.990099	68	45	39.823
PKHD1	0	genome.wustl.edu	37	6	51613045	51613045	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	51613045	51613045	C	T	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	silent	c.9369	p.A3123	0.791	superfamily_Pectin_lyase_fold/virulence	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				342	0	0	232	97	29.4833
TINAG	0	genome.wustl.edu	37	6	54191719	54191719	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	54191719	54191719	G	A	SNP	TINAG	ENST00000370864	human	ensembl	74_37	+1	known	missense	c.575	p.S192N	0.983	NULL	pfam_Somatomedin_B_dom,smart_Somatomedin_B_dom,pfscan_Somatomedin_B_dom	-	no_errors	TINAG	HGNC	ENSG00000137251				57	0	0	34	17	33.3333
HMGCLL1	0	genome.wustl.edu	37	6	55378846	55378846	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	55378846	55378846	C	T	SNP	HMGCLL1	ENST00000398661	human	ensembl	74_37	-1	known	missense	c.632	p.G211E	1.000	pfam_PYR_CT,pfscan_PYR_CT	pfam_PYR_CT,pfscan_PYR_CT	-	no_errors	HMGCLL1	HGNC	ENSG00000146151				84	0	0	28	10	26.3158
F13A1	0	genome.wustl.edu	37	6	6266819	6266819	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	6266819	6266819	C	T	SNP	F13A1	ENST00000264870	human	ensembl	74_37	-1	known	silent	c.543	p.T181	0.001	superfamily_Ig_E-set	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	F13A1	HGNC	ENSG00000124491				165	0	0	109	43	28.2895
HUS1B	0	genome.wustl.edu	37	6	656555	656555	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	656555	656555	G	A	SNP	HUS1B	ENST00000380907	human	ensembl	74_37	-1	known	silent	c.390	p.H130	0.001	pfam_Hus1/Mec3,pirsf_Cell_cycle_HUS1	pfam_Hus1/Mec3,pirsf_Cell_cycle_HUS1	-	no_errors	HUS1B	HGNC	ENSG00000188996				47	0	0	68	9	11.6883
COL9A1	0	genome.wustl.edu	37	6	71003924	71003924	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	71003924	71003924	A	G	SNP	COL9A1	ENST00000357250	human	ensembl	74_37	-1	known	silent	c.642	p.I214	0.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL9A1	HGNC	ENSG00000112280				178	0	0	74	41	35.6522
RREB1	0	genome.wustl.edu	37	6	7229250	7229250	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	7229250	7229250	G	A	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	silent	c.918	p.L306	0.976	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782				46	0	0	29	10	25.641
RREB1	0	genome.wustl.edu	37	6	7248772	7248772	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	7248772	7248772	C	T	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	silent	c.4800	p.C1600	0.854	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782				55	0	0	52	9	14.7541
RIMS1	0	genome.wustl.edu	37	6	72596851	72596851	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	72596851	72596851	G	A	SNP	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	missense	c.125	p.R42Q	1.000	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841				28	0	0	22	12	35.2941
COL12A1	0	genome.wustl.edu	37	6	75858174	75858174	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	75858174	75858174	C	T	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.4187	p.R1396Q	0.682	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				63	0	0	32	22	40.7407
BMP6	0	genome.wustl.edu	37	6	7862640	7862640	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	7862640	7862640	C	T	SNP	BMP6	ENST00000283147	human	ensembl	74_37	+1	known	silent	c.1113	p.R371	0.857	NULL	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	BMP6	HGNC	ENSG00000153162				131	0	0	70	42	37.5
ELOVL4	0	genome.wustl.edu	37	6	80656946	80656946	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	80656946	80656946	C	T	SNP	ELOVL4	ENST00000369816	human	ensembl	74_37	-1	known	silent	c.51	p.T17	1.000	NULL	pfam_GNS1_SUR4	-	no_errors	ELOVL4	HGNC	ENSG00000118402				42	0	0	28	19	40.4255
FHL5	0	genome.wustl.edu	37	6	97052726	97052726	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	97052726	97052726	G	A	SNP	FHL5	ENST00000326771	human	ensembl	74_37	+1	known	missense	c.260	p.R87H	0.995	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	FHL5	HGNC	ENSG00000112214				115	0	0	84	23	21.4953
MMS22L	0	genome.wustl.edu	37	6	97627291	97627291	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	97627291	97627291	C	A	SNP	MMS22L	ENST00000275053	human	ensembl	74_37	-1	known	missense	c.2529	p.E843D	0.848	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MMS22L	HGNC	ENSG00000146263				111	0	0	41	30	42.2535
SH2B2	0	genome.wustl.edu	37	7	101944461	101944461	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	101944461	101944461	C	T	SNP	SH2B2	ENST00000536178	human	ensembl	74_37	+1	known	silent	c.756	p.A252	0.989	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Phe_ZIP,pfam_Pleckstrin_homology,pfam_SH2,superfamily_Phe_ZIP,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_SH2,prints_SH2	-	no_errors	SH2B2	HGNC	ENSG00000160999				8	0	0	9	6	40
ORAI2	0	genome.wustl.edu	37	7	102087007	102087007	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	102087007	102087007	G	A	SNP	ORAI2	ENST00000356387	human	ensembl	74_37	+1	known	silent	c.273	p.R91	0.102	pfam_CRAC_channel	pfam_CRAC_channel	-	no_errors	ORAI2	HGNC	ENSG00000160991				55	0	0	60	41	40.5941
SRPK2	0	genome.wustl.edu	37	7	104783701	104783701	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	104783701	104783701	C	T	SNP	SRPK2	ENST00000393651	human	ensembl	74_37	-1	known	missense	c.890	p.R297H	1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	SRPK2	HGNC	ENSG00000135250				117	0	0	45	23	33.8235
PUS7	0	genome.wustl.edu	37	7	105148680	105148680	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	105148680	105148680	C	T	SNP	PUS7	ENST00000356362	human	ensembl	74_37	-1	known	missense	c.280	p.E94K	1.000	pirsf_PsdUridine_synth_TruD_euk	pfam_PsdUridine_synth_TruD,superfamily_PsdUridine_synth_cat_dom,pirsf_PsdUridine_synth_TruD_euk,pfscan_PsdUridine_synth_TruD_insert,tigrfam_PsdUridine_synth_TruD	-	no_errors	PUS7	HGNC	ENSG00000091127				168	0	0	90	37	29.1339
LAMB1	0	genome.wustl.edu	37	7	107575804	107575804	+	RNA	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	107575804	107575804	T	C	SNP	LAMB1	ENST00000491196	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	LAMB1	HGNC	ENSG00000091136				127	0	0	57	11	16.1765
LAMB1	0	genome.wustl.edu	37	7	107575808	107575808	+	RNA	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	107575808	107575808	T	G	SNP	LAMB1	ENST00000491196	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	LAMB1	HGNC	ENSG00000091136				115	1	0.862069	49	15	23.4375
LAMB1	0	genome.wustl.edu	37	7	107621183	107621183	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	107621183	107621183	G	A	SNP	LAMB1	ENST00000222399	human	ensembl	74_37	-1	known	silent	c.750	p.S250	0.997	pfam_Laminin_N,smart_Laminin_N,pfscan_Laminin_N	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Prefoldin,superfamily_t-SNARE,superfamily_P-loop_NTPase,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB1	HGNC	ENSG00000091136				78	0	0	46	16	25.8065
DOCK4	0	genome.wustl.edu	37	7	111430583	111430583	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	111430583	111430583	C	T	SNP	DOCK4	ENST00000428084	human	ensembl	74_37	-1	known	missense	c.3245	p.R1082Q	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK4	HGNC	ENSG00000128512				46	0	0	21	14	40
TES	0	genome.wustl.edu	37	7	115892010	115892010	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	115892010	115892010	G	A	SNP	TES	ENST00000358204	human	ensembl	74_37	+1	known	missense	c.899	p.R300Q	1.000	smart_Znf_LIM,pfscan_Znf_LIM	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	TES	HGNC	ENSG00000135269				68	0	0	49	29	37.1795
RNF148	0	genome.wustl.edu	37	7	122342061	122342061	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	122342061	122342061	A	G	SNP	RNF148	ENST00000434824	human	ensembl	74_37	-1	known	silent	c.744	p.D248	1.000	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF148	HGNC	ENSG00000235631				34	0	0	16	20	55.5556
CCDC136	0	genome.wustl.edu	37	7	128445885	128445885	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	128445885	128445885	G	A	SNP	CCDC136	ENST00000297788	human	ensembl	74_37	+1	known	missense	c.1019	p.R340Q	0.993	NULL	NULL	-	no_errors	CCDC136	HGNC	ENSG00000128596				52	0	0	31	19	38
LRGUK	0	genome.wustl.edu	37	7	133884088	133884088	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	133884088	133884088	A	G	SNP	LRGUK	ENST00000285928	human	ensembl	74_37	+1	known	silent	c.1662	p.E554	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	-	no_errors	LRGUK	HGNC	ENSG00000155530				183	0	0	91	29	24.1667
KIAA1549	0	genome.wustl.edu	37	7	138601707	138601707	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	138601707	138601707	C	T	SNP	KIAA1549	ENST00000422774	human	ensembl	74_37	-1	known	missense	c.2665	p.G889S	0.001	NULL	NULL	-	no_errors	KIAA1549	HGNC	ENSG00000122778				15	0	0	21	6	22.2222
KLRG2	0	genome.wustl.edu	37	7	139168284	139168284	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	139168284	139168284	G	A	SNP	KLRG2	ENST00000340940	human	ensembl	74_37	-1	known	silent	c.105	p.P35	0.019	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRG2	HGNC	ENSG00000188883				38	0	0	43	19	30.6452
ZNF783	0	genome.wustl.edu	37	7	148979375	148979375	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	148979375	148979375	G	A	SNP	ZNF783	ENST00000434415	human	ensembl	74_37	+1	known	missense	c.1582	p.A528T	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	ZNF783	HGNC	ENSG00000204946				16	0	0	19	9	32.1429
ZNF777	0	genome.wustl.edu	37	7	149129302	149129302	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	149129302	149129302	C	T	SNP	ZNF777	ENST00000247930	human	ensembl	74_37	-1	known	silent	c.2061	p.A687	0.976	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC	ENSG00000196453				123	0	0	101	53	34.4156
ZNF467	0	genome.wustl.edu	37	7	149463221	149463221	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	149463221	149463221	C	T	SNP	ZNF467	ENST00000302017	human	ensembl	74_37	-1	known	missense	c.370	p.A124T	0.004	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF467	HGNC	ENSG00000181444				61	0	0	28	17	37.7778
SSPO	0	genome.wustl.edu	37	7	149512418	149512418	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	149512418	149512418	G	A	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				20	0	0	19	9	32.1429
ZNF862	0	genome.wustl.edu	37	7	149559477	149559477	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	149559477	149559477	G	A	SNP	ZNF862	ENST00000223210	human	ensembl	74_37	+1	known	silent	c.3228	p.T1076	0.758	NULL	pfam_Krueppel-associated_box,pfam_HATC_dom_C,superfamily_Krueppel-associated_box,superfamily_RNaseH-like_dom,smart_Krueppel-associated_box,smart_Znf_TTF,pfscan_Krueppel-associated_box	-	no_errors	ZNF862	HGNC	ENSG00000106479				33	0	0	23	12	34.2857
ABCB8	0	genome.wustl.edu	37	7	150739088	150739088	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	150739088	150739088	G	A	SNP	ABCB8	ENST00000297504	human	ensembl	74_37	+1	known	missense	c.1709	p.R570H	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB8	HGNC	ENSG00000197150				99	0	0	73	23	23.9583
TMUB1	0	genome.wustl.edu	37	7	150778902	150778902	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	150778902	150778902	G	T	SNP	TMUB1	ENST00000297533	human	ensembl	74_37	-1	known	missense	c.475	p.L159I	1.000	pfam_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	TMUB1	HGNC	ENSG00000164897				13	0	0	10	2	16.6667
NUB1	0	genome.wustl.edu	37	7	151057316	151057316	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	151057316	151057316	C	T	SNP	NUB1	ENST00000568733	human	ensembl	74_37	+1	known	silent	c.855	p.D285	0.348	NULL	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	NUB1	HGNC	ENSG00000013374				26	0	0	22	6	21.4286
INTS1	0	genome.wustl.edu	37	7	1510813	1510813	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	1510813	1510813	G	A	SNP	INTS1	ENST00000389470	human	ensembl	74_37	-1	known	silent	c.6915	p.N2305	0.969	superfamily_ARM-type_fold	pfam_DUF3677,superfamily_ARM-type_fold	-	no_errors	INTS1	HGNC	ENSG00000164880				12	0	0	7	4	36.3636
KMT2C	0	genome.wustl.edu	37	7	151874710	151874710	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	151874710	151874710	G	A	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	nonsense	c.7828	p.R2610*	0.054	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				156	0	0	84	40	32.2581
INTS1	0	genome.wustl.edu	37	7	1535864	1535864	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	1535864	1535864	C	T	SNP	INTS1	ENST00000389470	human	ensembl	74_37	-1	known	missense	c.2023	p.V675M	0.999	NULL	pfam_DUF3677,superfamily_ARM-type_fold	-	no_errors	INTS1	HGNC	ENSG00000164880				76	0	0	59	21	26.25
FAM20C	0	genome.wustl.edu	37	7	195605	195605	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	195605	195605	C	T	SNP	FAM20C	ENST00000313766	human	ensembl	74_37	+1	known	silent	c.657	p.A219	0.000	NULL	pfam_DUF1193	-	no_errors	FAM20C	HGNC	ENSG00000177706				69	0	0	41	22	34.9206
ABCB5	0	genome.wustl.edu	37	7	20689716	20689716	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	20689716	20689716	G	T	SNP	ABCB5	ENST00000404938	human	ensembl	74_37	+1	putative	silent	c.1278	p.G426	0.949	superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846				58	0	0	33	16	32.6531
HOXA5	0	genome.wustl.edu	37	7	27181657	27181657	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	27181657	27181657	G	A	SNP	HOXA5	ENST00000222726	human	ensembl	74_37	-1	known	missense	c.610	p.R204C	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_antennapedia	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXA5	HGNC	ENSG00000106004				86	0	0	52	36	40.9091
CHN2	0	genome.wustl.edu	37	7	29438071	29438071	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	29438071	29438071	C	T	SNP	CHN2	ENST00000539406	human	ensembl	74_37	+1	known	missense	c.484	p.R162W	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SH2,superfamily_Rho_GTPase_activation_prot,smart_SH2,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_SH2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_DAG/PE-bd	-	no_errors	CHN2	HGNC	ENSG00000106069				154	0	0	41	29	41.4286
INMT	0	genome.wustl.edu	37	7	30795440	30795440	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	30795440	30795440	T	C	SNP	INMT	ENST00000013222	human	ensembl	74_37	+1	known	silent	c.765	p.I255	0.193	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	-	no_errors	INMT	HGNC	ENSG00000241644				122	0	0	83	54	39.4161
NEUROD6	0	genome.wustl.edu	37	7	31377947	31377947	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	31377947	31377947	G	A	SNP	NEUROD6	ENST00000297142	human	ensembl	74_37	-1	known	silent	c.936	p.S312	1.000	pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD6	HGNC	ENSG00000164600				82	0	0	48	24	33.3333
CCDC129	0	genome.wustl.edu	37	7	31682655	31682655	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	31682655	31682655	A	G	SNP	CCDC129	ENST00000451887	human	ensembl	74_37	+1	known	silent	c.1749	p.T583	0.000	NULL	NULL	-	no_errors	CCDC129	HGNC	ENSG00000180347				220	1	0.452489	224	12	5.08475
KBTBD2	0	genome.wustl.edu	37	7	32909836	32909836	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	32909836	32909836	T	G	SNP	KBTBD2	ENST00000304056	human	ensembl	74_37	-1	known	missense	c.993	p.K331N	1.000	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_BTB_POZ,pfam_BACK,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD2	HGNC	ENSG00000170852				116	0	0	49	42	46.1538
NPSR1	0	genome.wustl.edu	37	7	34917755	34917755	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	34917755	34917755	G	T	SNP	NPSR1	ENST00000359791	human	ensembl	74_37	+1	known	missense	c.1093	p.G365C	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Vasoprsn_rcpt	-	no_errors	NPSR1	HGNC	ENSG00000187258				22	0	0	13	4	23.5294
DPY19L2P1	0	genome.wustl.edu	37	7	35131520	35131520	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	35131520	35131520	C	T	SNP	DPY19L2P1	ENST00000436258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212				58	0	0	41	4	8.88889
DPY19L2P1	0	genome.wustl.edu	37	7	35131548	35131548	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	35131548	35131548	G	A	SNP	DPY19L2P1	ENST00000436258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.985	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212				46	0	0	38	4	9.52381
CDK13	0	genome.wustl.edu	37	7	40118358	40118358	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	40118358	40118358	T	C	SNP	CDK13	ENST00000181839	human	ensembl	74_37	+1	known	silent	c.2937	p.L979	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK13	HGNC	ENSG00000065883				71	0	0	42	19	31.1475
LINC00957	0	genome.wustl.edu	37	7	44079224	44079224	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	44079224	44079224	G	A	SNP	LINC00957	ENST00000441052	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	LINC00957	HGNC	ENSG00000235314				11	0	0	8	7	46.6667
NPC1L1	0	genome.wustl.edu	37	7	44556854	44556854	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	44556854	44556854	A	G	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	missense	c.3320	p.L1107P	1.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520				159	0	0	106	63	37.2781
NPC1L1	0	genome.wustl.edu	37	7	44573082	44573082	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	44573082	44573082	A	G	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	missense	c.2357	p.L786P	1.000	pfam_Patched,pfscan_SSD	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520				87	0	0	48	32	40
TNRC18	0	genome.wustl.edu	37	7	5427872	5427872	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	5427872	5427872	G	A	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	missense	c.1583	p.A528V	0.996	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095				25	0	0	20	9	31.0345
VSTM2A	0	genome.wustl.edu	37	7	54617746	54617746	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	54617746	54617746	C	T	SNP	VSTM2A	ENST00000402026	human	ensembl	74_37	+1	known	missense	c.514	p.R172C	0.957	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM2A	HGNC	ENSG00000170419				17	0	0	24	14	36.8421
VOPP1	0	genome.wustl.edu	37	7	55540588	55540588	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	55540588	55540588	G	A	SNP	VOPP1	ENST00000285279	human	ensembl	74_37	-1	known	missense	c.479	p.T160M	0.991	NULL	NULL	-	no_errors	VOPP1	HGNC	ENSG00000154978				12	0	0	7	7	50
RNF216	0	genome.wustl.edu	37	7	5662686	5662686	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	5662686	5662686	G	A	SNP	RNF216	ENST00000389902	human	ensembl	74_37	-1	known	silent	c.2577	p.F859	0.632	NULL	smart_Znf_C6HC	-	no_errors	RNF216	HGNC	ENSG00000011275				134	0	0	88	28	24.1379
ZNF716	0	genome.wustl.edu	37	7	57510008	57510008	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	57510008	57510008	C	T	SNP	ZNF716	ENST00000420713	human	ensembl	74_37	+1	known	missense	c.14	p.P5L	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF716	HGNC	ENSG00000182111				41	0	0	45	18	28.5714
ZNF733P	0	genome.wustl.edu	37	7	62752443	62752443	+	RNA	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	62752443	62752443	G	C	SNP	ZNF733P	ENST00000331425	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF733P	HGNC	ENSG00000185037				24	0	0	19	3	13.6364
ZNF727	0	genome.wustl.edu	37	7	63529392	63529392	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	63529392	63529392	T	G	SNP	ZNF727	ENST00000550760	human	ensembl	74_37	+1	known	missense	c.127	p.L43V	0.417	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF727	HGNC	ENSG00000257482				13	0	0	14	3	17.6471
DAGLB	0	genome.wustl.edu	37	7	6449906	6449906	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	6449906	6449906	G	T	SNP	DAGLB	ENST00000297056	human	ensembl	74_37	-1	known	missense	c.1675	p.L559I	1.000	NULL	pfam_Lipase_3	-	no_errors	DAGLB	HGNC	ENSG00000164535				32	0	0	24	7	22.5806
COL28A1	0	genome.wustl.edu	37	7	7493103	7493103	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	7493103	7493103	C	A	SNP	COL28A1	ENST00000399429	human	ensembl	74_37	-1	known	missense	c.1408	p.G470W	1.000	NULL	pfam_Collagen,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m	-	no_errors	COL28A1	HGNC	ENSG00000215018				153	0	0	62	23	27.0588
PCLO	0	genome.wustl.edu	37	7	82430834	82430834	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	82430834	82430834	C	T	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.15007	p.A5003T	1.000	superfamily_C2_dom	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				49	0	0	29	10	25.641
AKAP9	0	genome.wustl.edu	37	7	91726523	91726523	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	91726523	91726523	G	A	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	missense	c.10262	p.R3421H	0.932	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914				57	0	0	34	18	34.6154
SAMD9	0	genome.wustl.edu	37	7	92732145	92732145	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	92732145	92732145	G	C	SNP	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	missense	c.3266	p.A1089G	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413				91	0	0	57	3	5
TFPI2	0	genome.wustl.edu	37	7	93518426	93518426	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	93518426	93518426	G	A	SNP	TFPI2	ENST00000222543	human	ensembl	74_37	-1	known	silent	c.381	p.S127	0.003	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	TFPI2	HGNC	ENSG00000105825				126	0	0	58	35	37.6344
ASB4	0	genome.wustl.edu	37	7	95157219	95157219	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	95157219	95157219	C	T	SNP	ASB4	ENST00000325885	human	ensembl	74_37	+1	known	silent	c.582	p.Y194	0.997	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB4	HGNC	ENSG00000005981				49	0	0	28	14	33.3333
PDK4	0	genome.wustl.edu	37	7	95214973	95214973	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	95214973	95214973	C	T	SNP	PDK4	ENST00000005178	human	ensembl	74_37	-1	known	missense	c.1216	p.A406T	0.846	NULL	pfam_BCDHK/PDK_N,pfam_HATPase_ATP-bd,superfamily_BCDHK/PDK_N,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pfscan_Sig_transdc_His_kinase_core	-	no_errors	PDK4	HGNC	ENSG00000004799				108	0	0	53	4	7.01754
DLX6	0	genome.wustl.edu	37	7	96639257	96639257	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	96639257	96639257	G	T	SNP	DLX6	ENST00000518156	human	ensembl	74_37	+1	known	silent	c.780	p.S260	0.002	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX6	HGNC	ENSG00000006377				23	0	0	24	16	40
ARPC1B	0	genome.wustl.edu	37	7	98984171	98984171	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	98984171	98984171	G	A	SNP	ARPC1B	ENST00000493403	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ARPC1B	HGNC	ENSG00000130429				21	0	0	20	8	28.5714
MCM7	0	genome.wustl.edu	37	7	99697025	99697025	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	99697025	99697025	A	C	SNP	MCM7	ENST00000303887	human	ensembl	74_37	-1	known	missense	c.278	p.V93G	0.993	superfamily_NA-bd_OB-fold	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase,prints_MCM7,prints_MCM_4	-	no_errors	MCM7	HGNC	ENSG00000166508				54	0	0	77	15	16.3043
PVRIG	0	genome.wustl.edu	37	7	99818409	99818409	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	99818409	99818409	G	A	SNP	PVRIG	ENST00000317271	human	ensembl	74_37	+1	known	missense	c.623	p.R208H	0.000	NULL	NULL	-	no_errors	PVRIG	HGNC	ENSG00000213413				73	0	0	47	26	35.6164
GATS	0	genome.wustl.edu	37	7	99821311	99821311	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	99821311	99821311	C	T	SNP	GATS	ENST00000436886	human	ensembl	74_37	-1	known	missense	c.422	p.R141Q	1.000	NULL	NULL	-	no_errors	GATS	HGNC	ENSG00000160844				178	0	0	180	71	28.2869
FBXO43	0	genome.wustl.edu	37	8	101146558	101146558	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	101146558	101146558	C	T	SNP	FBXO43	ENST00000428847	human	ensembl	74_37	-1	known	missense	c.1709	p.R570Q	1.000	NULL	pfam_Znf_C6HC,superfamily_F-box_dom,smart_Znf_C6HC	-	no_errors	FBXO43	HGNC	ENSG00000156509				116	0	0	97	40	29.1971
RNF19A	0	genome.wustl.edu	37	8	101271373	101271373	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	101271373	101271373	C	T	SNP	RNF19A	ENST00000341084	human	ensembl	74_37	-1	known	missense	c.1928	p.R643Q	1.000	NULL	pfam_Znf_C6HC,smart_Znf_RING,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	RNF19A	HGNC	ENSG00000034677				129	0	0	132	54	29.0323
NACAP1	0	genome.wustl.edu	37	8	102381208	102381208	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	102381208	102381208	G	A	SNP	NACAP1	ENST00000419462	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NACAP1	HGNC	ENSG00000228224				58	0	0	60	24	28.5714
UBR5	0	genome.wustl.edu	37	8	103277490	103277490	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	103277490	103277490	C	T	SNP	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	missense	c.7439	p.R2480H	1.000	superfamily_HECT,smart_HECT	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517				40	0	0	33	11	25
PRSS55	0	genome.wustl.edu	37	8	10388924	10388924	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	10388924	10388924	A	G	SNP	PRSS55	ENST00000328655	human	ensembl	74_37	+1	known	missense	c.467	p.D156G	0.998	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS55	HGNC	ENSG00000184647				225	0	0	196	55	21.9124
LRP12	0	genome.wustl.edu	37	8	105502978	105502978	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	105502978	105502978	C	T	SNP	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	missense	c.2446	p.A816T	1.000	NULL	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650				103	0	0	104	7	6.30631
C8orf74	0	genome.wustl.edu	37	8	10557880	10557880	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	10557880	10557880	C	A	SNP	C8orf74	ENST00000304519	human	ensembl	74_37	+1	known	missense	c.784	p.P262T	0.069	NULL	NULL	-	no_errors	C8orf74	HGNC	ENSG00000171060				51	0	0	58	21	26.5823
TRHR	0	genome.wustl.edu	37	8	110099964	110099964	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	110099964	110099964	T	A	SNP	TRHR	ENST00000311762	human	ensembl	74_37	+1	known	missense	c.223	p.L75M	0.930	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_TRH_rcpt_1,prints_GPCR_Rhodpsn	-	no_errors	TRHR	HGNC	ENSG00000174417				103	0	0	130	42	24.4186
LOC101929290	0	genome.wustl.edu	37	8	11177395	11177395	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	11177395	11177395	C	T	SNP	LOC101929290	ENST00000498997	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AF131216.6	Clone_based_vega_gene	ENSG00000246477				23	0	0	38	3	7.31707
CSMD3	0	genome.wustl.edu	37	8	113318256	113318256	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	113318256	113318256	T	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.8051	p.N2684T	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				168	0	0	102	38	27.1429
TRPS1	0	genome.wustl.edu	37	8	116616339	116616339	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	116616339	116616339	C	T	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	silent	c.1857	p.A619	0.279	NULL	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447				80	0	0	91	26	22.2222
EXT1	0	genome.wustl.edu	37	8	118819539	118819539	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	118819539	118819539	A	G	SNP	EXT1	ENST00000378204	human	ensembl	74_37	-1	known	silent	c.1800	p.D600	1.000	pfam_HexNAc_Trfase_a	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXT1	HGNC	ENSG00000182197				75	0	0	79	22	21.7822
MIR30D	0	genome.wustl.edu	37	8	135817137	135817137	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	135817137	135817137	C	T	SNP	MIR30D	ENST00000362283	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR30D	HGNC	ENSG00000199153				127	0	0	108	40	27.027
COL22A1	0	genome.wustl.edu	37	8	139890218	139890218	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	139890218	139890218	C	T	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	missense	c.433	p.V145M	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436				15	0	0	25	11	30.5556
KCNK9	0	genome.wustl.edu	37	8	140631239	140631239	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	140631239	140631239	G	A	SNP	KCNK9	ENST00000303015	human	ensembl	74_37	-1	known	silent	c.387	p.G129	0.999	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl_TASK	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl_TASK,prints_KCNK9,prints_2pore_dom_K_chnl	-	no_errors	KCNK9	HGNC	ENSG00000169427				43	0	0	46	10	17.8571
DENND3	0	genome.wustl.edu	37	8	142178354	142178354	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	142178354	142178354	C	T	SNP	DENND3	ENST00000262585	human	ensembl	74_37	+1	known	missense	c.1765	p.R589W	0.000	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_WD40_repeat,pfam_uDENN_dom,superfamily_WD40_repeat_dom,smart_DENN_dom,smart_dDENN_dom,smart_WD40_repeat,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_WD40_repeat_dom	-	no_errors	DENND3	HGNC	ENSG00000105339				144	0	0	148	35	19.1257
SLC45A4	0	genome.wustl.edu	37	8	142228929	142228929	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	142228929	142228929	G	A	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	silent	c.810	p.G270	0.000	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				154	0	0	159	58	26.7281
PTP4A3	0	genome.wustl.edu	37	8	142435181	142435181	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	142435181	142435181	C	T	SNP	PTP4A3	ENST00000329397	human	ensembl	74_37	+1	known	missense	c.139	p.R47C	0.846	pfam_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Dual-sp_phosphatase_cat-dom,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	PTP4A3	HGNC	ENSG00000184489				49	0	0	73	17	18.8889
PTP4A3	0	genome.wustl.edu	37	8	142441098	142441098	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	142441098	142441098	G	A	SNP	PTP4A3	ENST00000329397	human	ensembl	74_37	+1	known	missense	c.476	p.R159Q	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Dual-sp_phosphatase_cat-dom,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	PTP4A3	HGNC	ENSG00000184489				102	0	0	93	34	26.7717
BAI1	0	genome.wustl.edu	37	8	143624776	143624776	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	143624776	143624776	C	T	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	missense	c.4426	p.R1476W	0.999	prints_GPCR_2_brain-spec_angio_inhib	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790				46	0	0	45	12	21.0526
LY6E	0	genome.wustl.edu	37	8	144103050	144103050	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	144103050	144103050	C	T	SNP	LY6E	ENST00000292494	human	ensembl	74_37	+1	known	silent	c.240	p.G80	0.000	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	LY6E	HGNC	ENSG00000160932				173	0	0	153	48	23.8806
ZNF707	0	genome.wustl.edu	37	8	144776320	144776320	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	144776320	144776320	C	T	SNP	ZNF707	ENST00000358656	human	ensembl	74_37	+1	known	missense	c.736	p.R246C	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF707	HGNC	ENSG00000181135				15	0	0	28	12	30
FAM83H	0	genome.wustl.edu	37	8	144811446	144811446	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	144811446	144811446	G	A	SNP	FAM83H	ENST00000388913	human	ensembl	74_37	-1	known	silent	c.495	p.S165	0.000	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83H	HGNC	ENSG00000180921				73	0	0	89	34	27.6423
PLEC	0	genome.wustl.edu	37	8	144992352	144992352	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	144992352	144992352	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.12048	p.D4016	1.000	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				32	0	0	28	14	33.3333
PARP10	0	genome.wustl.edu	37	8	145051961	145051961	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	145051961	145051961	G	A	SNP	PARP10	ENST00000313028	human	ensembl	74_37	-1	known	silent	c.2769	p.R923	0.296	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP10	HGNC	ENSG00000178685				17	0	0	15	4	21.0526
CYC1	0	genome.wustl.edu	37	8	145152141	145152141	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	145152141	145152141	A	T	SNP	CYC1	ENST00000318911	human	ensembl	74_37	+1	known	missense	c.880	p.M294L	0.980	pfam_Cyt_c1,superfamily_Cyt_c1_TM_anchor_C,prints_Cyt_c1	pfam_Cyt_c1,superfamily_Cyt_c-like_dom,superfamily_Cyt_c1_TM_anchor_C,prints_Cyt_c1	-	no_errors	CYC1	HGNC	ENSG00000179091				46	0	0	68	4	5.55556
DGAT1	0	genome.wustl.edu	37	8	145541660	145541660	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	145541660	145541660	C	T	SNP	DGAT1	ENST00000332324	human	ensembl	74_37	-1	known	missense	c.772	p.A258T	1.000	pfam_MBOAT_fam	pfam_MBOAT_fam,superfamily_PEP-util_enz_mobile_dom	-	no_errors	DGAT1	HGNC	ENSG00000185000				85	0	0	67	13	16.25
TONSL	0	genome.wustl.edu	37	8	145666250	145666250	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	145666250	145666250	G	A	SNP	TONSL	ENST00000409379	human	ensembl	74_37	-1	known	missense	c.1015	p.R339C	0.002	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TONSL	HGNC	ENSG00000160949				50	0	0	75	34	31.1927
RECQL4	0	genome.wustl.edu	37	8	145737873	145737873	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	145737873	145737873	T	C	SNP	RECQL4	ENST00000428558	human	ensembl	74_37	-1	known	missense	c.2957	p.E986G	1.000	NULL	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DNA_rep_checkpnt_protein,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL4	HGNC	ENSG00000160957				45	0	0	58	19	24.6753
ZNF250	0	genome.wustl.edu	37	8	146107413	146107413	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	146107413	146107413	G	A	SNP	ZNF250	ENST00000292579	human	ensembl	74_37	-1	known	silent	c.1170	p.T390	0.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF250	HGNC	ENSG00000196150				54	0	0	81	25	23.5849
MICU3	0	genome.wustl.edu	37	8	16884801	16884801	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	16884801	16884801	C	T	SNP	MICU3	ENST00000318063	human	ensembl	74_37	+1	known	nonsense	c.13	p.R5*	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MICU3	HGNC	ENSG00000155970				50	0	0	66	11	14.2857
MICU3	0	genome.wustl.edu	37	8	16884877	16884877	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	16884877	16884877	G	A	SNP	MICU3	ENST00000318063	human	ensembl	74_37	+1	known	missense	c.89	p.R30Q	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MICU3	HGNC	ENSG00000155970				27	0	0	42	6	12.5
ASAH1	0	genome.wustl.edu	37	8	17919227	17919227	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	17919227	17919227	T	C	SNP	ASAH1	ENST00000381733	human	ensembl	74_37	-1	known	missense	c.719	p.N240S	1.000	pfam_Chologlycine_hydro,pirsf_Acid_ceramidase-like	pfam_Chologlycine_hydro,pirsf_Acid_ceramidase-like	-	no_errors	ASAH1	HGNC	ENSG00000104763				9	0	0	13	5	27.7778
ARHGEF10	0	genome.wustl.edu	37	8	1857614	1857614	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	1857614	1857614	C	T	SNP	ARHGEF10	ENST00000398564	human	ensembl	74_37	+1	known	silent	c.2196	p.A732	0.017	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10	HGNC	ENSG00000104728				60	0	0	88	25	22.1239
SORBS3	0	genome.wustl.edu	37	8	22428685	22428685	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	22428685	22428685	G	A	SNP	SORBS3	ENST00000240123	human	ensembl	74_37	+1	known	missense	c.1694	p.R565H	0.263	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,prints_p67phox,prints_SH3_domain,pfscan_Sorb,pfscan_SH3_domain	-	no_errors	SORBS3	HGNC	ENSG00000120896				54	0	0	105	7	6.25
PDLIM2	0	genome.wustl.edu	37	8	22438965	22438965	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	22438965	22438965	G	A	SNP	PDLIM2	ENST00000308354	human	ensembl	74_37	+1	known	missense	c.917	p.S306N	0.107	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_Znf_LIM,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM2	HGNC	ENSG00000120913				33	0	0	15	8	34.7826
EGR3	0	genome.wustl.edu	37	8	22548299	22548299	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	22548299	22548299	C	T	SNP	EGR3	ENST00000317216	human	ensembl	74_37	-1	known	missense	c.851	p.R284H	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR3	HGNC	ENSG00000179388				94	0	0	107	33	23.5714
SDAD1P1	0	genome.wustl.edu	37	8	26237200	26237200	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	26237200	26237200	G	A	SNP	SDAD1P1	ENST00000519902	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.344	-	-	-	no_errors	SDAD1P1	HGNC	ENSG00000228451				56	0	0	53	23	30.2632
HMBOX1	0	genome.wustl.edu	37	8	28902933	28902933	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	28902933	28902933	G	A	SNP	HMBOX1	ENST00000444075	human	ensembl	74_37	+1	known	missense	c.907	p.A303T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_HNF-1_N,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HMBOX1	HGNC	ENSG00000147421				110	0	0	148	45	23.3161
WRN	0	genome.wustl.edu	37	8	30949415	30949415	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	30949415	30949415	G	A	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	splice_site	c.1898+1	e15+1	1.000	-	-	-	no_errors	WRN	HGNC	ENSG00000165392				45	0	0	43	16	27.1186
WRN	0	genome.wustl.edu	37	8	30969237	30969237	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	30969237	30969237	G	A	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	missense	c.2195	p.R732Q	1.000	superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392				61	0	0	43	22	33.8462
TTI2	0	genome.wustl.edu	37	8	33367395	33367395	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	33367395	33367395	G	A	SNP	TTI2	ENST00000360742	human	ensembl	74_37	-1	known	nonsense	c.703	p.Q235*	1.000	pfam_DUF2454	pfam_DUF2454,superfamily_ARM-type_fold	-	no_errors	TTI2	HGNC	ENSG00000129696				71	0	0	53	24	31.1688
ADAM9	0	genome.wustl.edu	37	8	38912090	38912090	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	38912090	38912090	C	T	SNP	ADAM9	ENST00000487273	human	ensembl	74_37	+1	known	missense	c.1393	p.R465W	0.002	pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM9	HGNC	ENSG00000168615				89	0	0	56	18	24.3243
ANK1	0	genome.wustl.edu	37	8	41581130	41581130	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	41581130	41581130	T	C	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	missense	c.733	p.I245V	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534				93	0	0	97	38	28.1481
ANK1	0	genome.wustl.edu	37	8	41583342	41583342	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	41583342	41583342	G	A	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	silent	c.549	p.N183	0.772	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534				37	0	0	27	9	25
KAT6A	0	genome.wustl.edu	37	8	41790659	41790659	+	Silent	SNP	T	T	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	41790659	41790659	T	G	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	silent	c.5079	p.P1693	0.229	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168				26	0	0	19	16	45.7143
VDAC3	0	genome.wustl.edu	37	8	42262421	42262421	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	42262421	42262421	T	C	SNP	VDAC3	ENST00000392935	human	ensembl	74_37	+1	known	missense	c.742	p.Y248H	1.000	pfam_Porin_Euk/Tom40,prints_Porin_Euk	pfam_Porin_Euk/Tom40,prints_Porin_Euk	-	no_errors	VDAC3	HGNC	ENSG00000078668				59	0	0	30	10	25
PXDNL	0	genome.wustl.edu	37	8	52321537	52321537	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	52321537	52321537	C	T	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.2647	p.A883T	0.165	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485				71	0	0	63	21	25
ST18	0	genome.wustl.edu	37	8	53077775	53077775	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	53077775	53077775	C	T	SNP	ST18	ENST00000276480	human	ensembl	74_37	-1	known	missense	c.1215	p.M405I	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488				185	0	0	135	40	22.8571
OPRK1	0	genome.wustl.edu	37	8	54163462	54163462	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	54163462	54163462	C	G	SNP	OPRK1	ENST00000265572	human	ensembl	74_37	-1	known	missense	c.136	p.D46H	0.027	prints_Kappa_opi_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Kappa_opi_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt,prints_NPY_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OPRK1	HGNC	ENSG00000082556				31	0	0	42	12	22.2222
RGS20	0	genome.wustl.edu	37	8	54852220	54852220	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	54852220	54852220	G	A	SNP	RGS20	ENST00000297313	human	ensembl	74_37	+1	known	missense	c.595	p.G199R	0.211	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS20	HGNC	ENSG00000147509				12	0	0	16	6	27.2727
XKR4	0	genome.wustl.edu	37	8	56015092	56015092	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	56015092	56015092	G	T	SNP	XKR4	ENST00000327381	human	ensembl	74_37	+1	known	missense	c.44	p.S15I	1.000	NULL	pfam_Transport_prot_XK	-	no_errors	XKR4	HGNC	ENSG00000206579				47	0	0	62	18	22.5
PLAG1	0	genome.wustl.edu	37	8	57079206	57079206	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	57079206	57079206	C	T	SNP	PLAG1	ENST00000316981	human	ensembl	74_37	-1	known	missense	c.1099	p.V367M	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PLAG1	HGNC	ENSG00000181690				159	0	0	137	51	27.1277
CA8	0	genome.wustl.edu	37	8	61137128	61137128	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	61137128	61137128	A	G	SNP	CA8	ENST00000317995	human	ensembl	74_37	-1	known	missense	c.593	p.I198T	1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA8	HGNC	ENSG00000178538				114	0	0	85	27	24.1071
VCPIP1	0	genome.wustl.edu	37	8	67577032	67577032	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	67577032	67577032	G	A	SNP	VCPIP1	ENST00000310421	human	ensembl	74_37	-1	known	missense	c.2162	p.T721M	1.000	NULL	pfam_OTU,pfscan_OTU	-	no_errors	VCPIP1	HGNC	ENSG00000175073				94	0	0	83	24	22.4299
JPH1	0	genome.wustl.edu	37	8	75227597	75227597	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	75227597	75227597	C	T	SNP	JPH1	ENST00000342232	human	ensembl	74_37	-1	known	missense	c.638	p.R213Q	1.000	pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH1	HGNC	ENSG00000104369				145	0	0	167	50	23.0415
ZFHX4	0	genome.wustl.edu	37	8	77775852	77775852	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	77775852	77775852	C	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.9902	p.P3301H	0.995	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				41	0	0	42	22	34.375
PEX2	0	genome.wustl.edu	37	8	77895873	77895873	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	77895873	77895873	T	C	SNP	PEX2	ENST00000357039	human	ensembl	74_37	-1	known	missense	c.542	p.Q181R	1.000	pfam_Pex_N	pfam_Pex_N,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PEX2	HGNC	ENSG00000164751				120	0	0	83	32	27.8261
ZNF704	0	genome.wustl.edu	37	8	81605279	81605279	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	81605279	81605279	C	T	SNP	ZNF704	ENST00000327835	human	ensembl	74_37	-1	known	silent	c.285	p.S95	0.999	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF704	HGNC	ENSG00000164684				71	0	0	58	19	24.6753
SGK223	0	genome.wustl.edu	37	8	8235027	8235027	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	8235027	8235027	C	T	SNP	SGK223	ENST00000330777	human	ensembl	74_37	-1	known	missense	c.892	p.A298T	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	SGK223	Uniprot_gn	ENSG00000182319				27	0	0	36	17	32.0755
RALYL	0	genome.wustl.edu	37	8	85799874	85799874	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	85799874	85799874	C	T	SNP	RALYL	ENST00000521268	human	ensembl	74_37	+1	known	silent	c.721	p.L241	1.000	pirsf_hnRNP_C_Raly	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	RALYL	HGNC	ENSG00000184672				102	1	0.970874	123	38	23.6025
SLC7A13	0	genome.wustl.edu	37	8	87242019	87242019	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	87242019	87242019	C	T	SNP	SLC7A13	ENST00000297524	human	ensembl	74_37	-1	known	missense	c.488	p.S163N	0.049	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A13	HGNC	ENSG00000164893				97	0	0	81	25	23.5849
RMDN1	0	genome.wustl.edu	37	8	87517094	87517094	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	87517094	87517094	G	A	SNP	RMDN1	ENST00000518772	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.714	-	-	-	no_errors	RMDN1	HGNC	ENSG00000176623				40	0	0	56	7	11.1111
CNGB3	0	genome.wustl.edu	37	8	87590929	87590929	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	87590929	87590929	C	A	SNP	CNGB3	ENST00000320005	human	ensembl	74_37	-1	known	missense	c.2091	p.E697D	0.990	NULL	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGB3	HGNC	ENSG00000170289				119	0	0	88	41	31.7829
TMEM64	0	genome.wustl.edu	37	8	91637965	91637965	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	91637965	91637965	G	T	SNP	TMEM64	ENST00000458549	human	ensembl	74_37	-1	known	silent	c.1077	p.T359	1.000	NULL	pfam_SNARE_assoc	-	no_errors	TMEM64	HGNC	ENSG00000180694				45	0	0	32	8	20
SLC26A7	0	genome.wustl.edu	37	8	92307854	92307854	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	92307854	92307854	G	A	SNP	SLC26A7	ENST00000309536	human	ensembl	74_37	+1	known	missense	c.400	p.V134M	0.017	NULL	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	-	no_errors	SLC26A7	HGNC	ENSG00000147606				91	0	0	94	24	20.339
TSPYL5	0	genome.wustl.edu	37	8	98289974	98289974	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	98289974	98289974	C	T	SNP	TSPYL5	ENST00000322128	human	ensembl	74_37	-1	known	silent	c.99	p.P33	0.000	NULL	pfam_NAP_family	-	no_errors	TSPYL5	HGNC	ENSG00000180543				13	0	0	14	11	44
TSPYL5	0	genome.wustl.edu	37	8	98290067	98290067	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	98290067	98290067	G	A	SNP	TSPYL5	ENST00000322128	human	ensembl	74_37	-1	known	silent	c.6	p.S2	1.000	NULL	pfam_NAP_family	-	no_errors	TSPYL5	HGNC	ENSG00000180543				21	0	0	24	6	20
CCDC180	0	genome.wustl.edu	37	9	100124588	100124588	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	100124588	100124588	G	A	SNP	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	missense	c.3899	p.G1300D	0.000	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816				145	0	0	98	58	37.1795
TDRD7	0	genome.wustl.edu	37	9	100245206	100245206	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	100245206	100245206	C	T	SNP	TDRD7	ENST00000355295	human	ensembl	74_37	+1	known	missense	c.2488	p.R830C	0.991	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD7	HGNC	ENSG00000196116				120	0	0	48	38	44.186
TRIM14	0	genome.wustl.edu	37	9	100850119	100850119	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	100850119	100850119	C	T	SNP	TRIM14	ENST00000341469	human	ensembl	74_37	-1	known	missense	c.962	p.R321H	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,prints_Butyrophylin	-	no_errors	TRIM14	HGNC	ENSG00000106785				9	0	0	13	6	31.5789
GABBR2	0	genome.wustl.edu	37	9	101470716	101470716	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	101470716	101470716	G	A	SNP	GABBR2	ENST00000259455	human	ensembl	74_37	-1	known	missense	c.304	p.R102W	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_GABA_rcpt_B2	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_GABA_rcpt_B2,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,prints_GPCR_3,pfscan_GPCR_3_C	-	no_errors	GABBR2	HGNC	ENSG00000136928				16	0	0	13	6	31.5789
PPP3R2	0	genome.wustl.edu	37	9	104357038	104357038	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	104357038	104357038	G	A	SNP	PPP3R2	ENST00000374806	human	ensembl	74_37	-1	known	missense	c.175	p.R59W	1.000	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	PPP3R2	HGNC	ENSG00000188386				96	0	0	72	15	17.2414
SVEP1	0	genome.wustl.edu	37	9	113341460	113341460	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	113341460	113341460	C	T	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.364	p.V122M	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124				10	0	0	7	4	36.3636
SLC46A2	0	genome.wustl.edu	37	9	115652385	115652385	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	115652385	115652385	G	A	SNP	SLC46A2	ENST00000374228	human	ensembl	74_37	-1	known	missense	c.577	p.H193Y	0.984	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Tet-R_TetA/multi-R_MdtG	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	SLC46A2	HGNC	ENSG00000119457				39	0	0	30	20	40
AMBP	0	genome.wustl.edu	37	9	116836367	116836367	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	116836367	116836367	T	A	SNP	AMBP	ENST00000265132	human	ensembl	74_37	-1	known	missense	c.403	p.T135S	0.997	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like	pfam_Prot_inh_Kunz-m,pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m,prints_A1-microglobln,prints_PstgldnD_synth,prints_Prot_inh_Kunz-m,prints_Lipocalin	-	no_errors	AMBP	HGNC	ENSG00000106927				97	0	0	77	5	6.09756
PAPPA	0	genome.wustl.edu	37	9	118949583	118949583	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	118949583	118949583	G	A	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	missense	c.566	p.R189H	1.000	superfamily_ConA-like_lec_gl_sf,smart_LamG-like	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752				124	0	0	72	38	34.5455
GSN	0	genome.wustl.edu	37	9	124072991	124072991	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	124072991	124072991	C	T	SNP	GSN	ENST00000373818	human	ensembl	74_37	+1	known	silent	c.534	p.H178	1.000	NULL	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	GSN	HGNC	ENSG00000148180				48	0	0	36	23	38.9831
GSN	0	genome.wustl.edu	37	9	124089585	124089585	+	Splice_Site	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	124089585	124089585	G	T	SNP	GSN	ENST00000373818	human	ensembl	74_37	+1	known	splice_site	c.1741-1	e13-1	0.996	-	-	-	no_errors	GSN	HGNC	ENSG00000148180				44	0	0	27	9	25
PTGS1	0	genome.wustl.edu	37	9	125140230	125140230	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	125140230	125140230	C	T	SNP	PTGS1	ENST00000362012	human	ensembl	74_37	+1	known	silent	c.147	p.F49	0.449	pfscan_EG-like_dom	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_EG-like_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	PTGS1	HGNC	ENSG00000095303				113	0	0	60	29	32.5843
DENND1A	0	genome.wustl.edu	37	9	126392754	126392754	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	126392754	126392754	A	G	SNP	DENND1A	ENST00000394219	human	ensembl	74_37	-1	known	missense	c.524	p.L175P	1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1A	HGNC	ENSG00000119522				13	0	0	6	5	45.4545
OLFML2A	0	genome.wustl.edu	37	9	127566419	127566419	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	127566419	127566419	G	T	SNP	OLFML2A	ENST00000373580	human	ensembl	74_37	+1	known	missense	c.966	p.K322N	0.435	NULL	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2A	HGNC	ENSG00000185585				52	0	0	62	4	6.06061
RPL12	0	genome.wustl.edu	37	9	130211929	130211929	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	130211929	130211929	C	T	SNP	RPL12	ENST00000361436	human	ensembl	74_37	-1	known	missense	c.170	p.R57K	1.000	pfam_Ribosomal_L11_N,superfamily_Ribosomal_L11_N,smart_Ribosomal_L11	pfam_Ribosomal_L11_N,pfam_Ribosomal_L11_C,superfamily_Ribosomal_L11_N,superfamily_Ribosomal_L11_C,smart_Ribosomal_L11	-	no_errors	RPL12	HGNC	ENSG00000197958				56	0	0	23	19	45.2381
C9orf117	0	genome.wustl.edu	37	9	130475026	130475026	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	130475026	130475026	G	A	SNP	C9orf117	ENST00000373295	human	ensembl	74_37	+1	known	silent	c.1176	p.T392	0.000	NULL	NULL	-	no_errors	C9orf117	HGNC	ENSG00000160401				95	0	0	80	35	30.4348
NAIF1	0	genome.wustl.edu	37	9	130829272	130829272	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	130829272	130829272	C	T	SNP	NAIF1	ENST00000373078	human	ensembl	74_37	-1	known	missense	c.109	p.A37T	1.000	NULL	NULL	-	no_errors	NAIF1	HGNC	ENSG00000171169				188	0	0	137	69	33.4951
PTGES2	0	genome.wustl.edu	37	9	130885323	130885323	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	130885323	130885323	C	T	SNP	PTGES2	ENST00000338961	human	ensembl	74_37	-1	known	silent	c.777	p.A259	0.030	superfamily_Glutathione-S-Trfase_C-like	pfam_Glutaredoxin,pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold	-	no_errors	PTGES2	HGNC	ENSG00000148334				83	0	0	80	32	28.5714
SLC27A4	0	genome.wustl.edu	37	9	131107438	131107438	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	131107438	131107438	G	A	SNP	SLC27A4	ENST00000300456	human	ensembl	74_37	+1	known	missense	c.166	p.G56S	0.381	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A4	HGNC	ENSG00000167114				61	0	0	46	18	28.125
SPTAN1	0	genome.wustl.edu	37	9	131392621	131392621	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	131392621	131392621	G	A	SNP	SPTAN1	ENST00000358161	human	ensembl	74_37	+1	known	silent	c.6729	p.S2243	0.152	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_EF_hand_dom,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	SPTAN1	HGNC	ENSG00000197694				131	0	0	84	45	34.8837
DOLK	0	genome.wustl.edu	37	9	131708898	131708898	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	131708898	131708898	C	G	SNP	DOLK	ENST00000372586	human	ensembl	74_37	-1	known	missense	c.685	p.V229L	1.000	NULL	NULL	-	no_errors	DOLK	HGNC	ENSG00000175283				163	0	0	117	56	32.3699
C9orf50	0	genome.wustl.edu	37	9	132382797	132382797	+	Silent	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	132382797	132382797	A	G	SNP	C9orf50	ENST00000372478	human	ensembl	74_37	-1	known	silent	c.57	p.P19	0.001	NULL	NULL	-	no_errors	C9orf50	HGNC	ENSG00000179058				17	0	0	16	7	30.4348
NUP214	0	genome.wustl.edu	37	9	134027125	134027125	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	134027125	134027125	G	A	SNP	NUP214	ENST00000451030	human	ensembl	74_37	+1	known	silent	c.2283	p.S761	0.996	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883				85	0	0	34	19	35.8491
POMT1	0	genome.wustl.edu	37	9	134387493	134387493	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	134387493	134387493	A	G	SNP	POMT1	ENST00000372228	human	ensembl	74_37	+1	known	missense	c.1118	p.N373S	1.000	pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif,pfscan_MIR_motif	pfam_Glyco_trans_39,pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif,pfscan_MIR_motif	-	no_errors	POMT1	HGNC	ENSG00000130714				56	0	0	30	14	31.8182
NTNG2	0	genome.wustl.edu	37	9	135102412	135102412	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	135102412	135102412	C	T	SNP	NTNG2	ENST00000360670	human	ensembl	74_37	+1	known	missense	c.1034	p.T345M	0.997	NULL	pfam_Laminin_N,pfam_EGF_laminin,pfam_EGF_extracell,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	NTNG2	HGNC	ENSG00000196358				27	0	0	19	20	51.2821
BARHL1	0	genome.wustl.edu	37	9	135464717	135464717	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	135464717	135464717	G	A	SNP	BARHL1	ENST00000263610	human	ensembl	74_37	+1	known	silent	c.792	p.P264	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	BARHL1	HGNC	ENSG00000125492				135	0	0	119	33	21.7105
BRD3	0	genome.wustl.edu	37	9	136913440	136913440	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	136913440	136913440	C	T	SNP	BRD3	ENST00000303407	human	ensembl	74_37	-1	known	missense	c.851	p.R284H	1.000	superfamily_Bromodomain	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	BRD3	HGNC	ENSG00000169925				73	0	0	27	21	43.75
MRPS2	0	genome.wustl.edu	37	9	138393760	138393760	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	138393760	138393760	C	A	SNP	MRPS2	ENST00000241600	human	ensembl	74_37	+1	known	silent	c.240	p.S80	0.824	NULL	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom,prints_Ribosomal_S2	-	no_errors	MRPS2	HGNC	ENSG00000122140				160	0	0	62	41	39.8058
UBAC1	0	genome.wustl.edu	37	9	138837033	138837033	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	138837033	138837033	C	T	SNP	UBAC1	ENST00000371756	human	ensembl	74_37	-1	known	silent	c.717	p.T239	0.001	superfamily_UBA-like	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,smart_STI1_HS-bd,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAC1	HGNC	ENSG00000130560				70	0	0	46	10	17.8571
QSOX2	0	genome.wustl.edu	37	9	139100961	139100961	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	139100961	139100961	C	T	SNP	QSOX2	ENST00000358701	human	ensembl	74_37	-1	known	silent	c.1710	p.T570	0.000	NULL	pfam_ERV/ALR_sulphydryl_oxidase,pfam_Thioredoxin_domain,superfamily_ERV/ALR_sulphydryl_oxidase,superfamily_Thioredoxin-like_fold	-	no_errors	QSOX2	HGNC	ENSG00000165661				119	0	0	65	32	32.9897
GPSM1	0	genome.wustl.edu	37	9	139243180	139243180	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	139243180	139243180	C	T	SNP	GPSM1	ENST00000440944	human	ensembl	74_37	+1	known	silent	c.1239	p.S413	0.019	NULL	pfam_GoLoco_motif,pfam_TPR_1,smart_TPR_repeat,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GPSM1	HGNC	ENSG00000160360				30	0	0	30	7	18.9189
SEC16A	0	genome.wustl.edu	37	9	139371886	139371886	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	139371886	139371886	G	A	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	missense	c.182	p.A61V	0.495	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396				90	0	0	58	28	32.5581
AGPAT2	0	genome.wustl.edu	37	9	139571949	139571949	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	139571949	139571949	C	T	SNP	AGPAT2	ENST00000371696	human	ensembl	74_37	-1	known	missense	c.242	p.R81Q	0.069	pfam_Plipid/glycerol_acylTrfase,tigrfam_AGP_acyltrans	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase,tigrfam_AGP_acyltrans	-	no_errors	AGPAT2	HGNC	ENSG00000169692				74	0	0	74	5	6.32911
C9orf173	0	genome.wustl.edu	37	9	140147654	140147654	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	140147654	140147654	G	A	SNP	C9orf173	ENST00000412566	human	ensembl	74_37	+1	known	missense	c.884	p.R295H	0.057	NULL	NULL	-	no_errors	C9orf173	HGNC	ENSG00000197768				18	0	0	5	10	66.6667
PNPLA7	0	genome.wustl.edu	37	9	140437253	140437253	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	140437253	140437253	C	T	SNP	PNPLA7	ENST00000406427	human	ensembl	74_37	-1	known	silent	c.507	p.R169	1.000	superfamily_cNMP-bd-like	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA7	HGNC	ENSG00000130653				110	0	0	51	31	37.8049
CACNA1B	0	genome.wustl.edu	37	9	140846799	140846799	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	140846799	140846799	T	C	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.1040	p.M347T	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				78	0	0	55	30	35.2941
TUBBP5	0	genome.wustl.edu	37	9	141070999	141070999	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	141070999	141070999	G	A	SNP	TUBBP5	ENST00000290377	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.979	-	-	-	no_errors	TUBBP5	HGNC	ENSG00000159247				27	0	0	22	17	43.5897
FREM1	0	genome.wustl.edu	37	9	14806679	14806679	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	14806679	14806679	C	T	SNP	FREM1	ENST00000380881	human	ensembl	74_37	-1	known	missense	c.3257	p.S1086N	1.000	NULL	pfam_C-type_lectin,pfam_Calx_beta,superfamily_C-type_lectin_fold,superfamily_Cadherin-like,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	FREM1	HGNC	ENSG00000164946				14	0	0	7	4	36.3636
CBWD1	0	genome.wustl.edu	37	9	173281	173281	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	173281	173281	G	A	SNP	CBWD1	ENST00000356521	human	ensembl	74_37	-1	known	silent	c.327	p.C109	1.000	pfam_CobW/HypB/UreG_dom,superfamily_P-loop_NTPase	pfam_CobW/HypB/UreG_dom,pfam_Cbl_biosynth_CobW-like_C,superfamily_P-loop_NTPase,superfamily_Cbl_biosynth_CobW-like_C	-	no_errors	CBWD1	HGNC	ENSG00000172785				53	0	0	38	28	42.4242
FOCAD	0	genome.wustl.edu	37	9	20944746	20944746	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	20944746	20944746	C	T	SNP	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	silent	c.3528	p.S1176	0.928	superfamily_ARM-type_fold	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352				49	0	0	23	15	39.4737
CDKN2A	0	genome.wustl.edu	37	9	21971132	21971132	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	21971132	21971132	C	T	SNP	CDKN2A	ENST00000361570	human	ensembl	74_37	-1	known	missense	c.392	p.R131H	0.000	NULL	pfam_Cyclin_kinase-Inhib_2A	-	no_errors	CDKN2A	HGNC	ENSG00000147889				36	0	0	32	18	36
TEK	0	genome.wustl.edu	37	9	27212860	27212860	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	27212860	27212860	G	A	SNP	TEK	ENST00000380036	human	ensembl	74_37	+1	known	missense	c.2842	p.V948M	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tyr_kin_Tie2_Ig-like_dom-1_N,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TEK	HGNC	ENSG00000120156				36	0	0	33	20	37.7358
RFX3	0	genome.wustl.edu	37	9	3293099	3293099	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	3293099	3293099	G	A	SNP	RFX3	ENST00000382004	human	ensembl	74_37	-1	known	nonsense	c.709	p.R237*	1.000	pfam_DNA-bd_RFX	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX3	HGNC	ENSG00000080298				89	0	0	41	17	29.3103
FANCG	0	genome.wustl.edu	37	9	35074153	35074153	+	Silent	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	35074153	35074153	G	T	SNP	FANCG	ENST00000378643	human	ensembl	74_37	-1	known	silent	c.1821	p.A607	0.013	NULL	superfamily_Sig_transdc_His_kin_Hpt_dom,smart_TPR_repeat	-	no_errors	FANCG	HGNC	ENSG00000221829				82	0	0	102	7	6.42202
TLN1	0	genome.wustl.edu	37	9	35711592	35711592	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	35711592	35711592	C	T	SNP	TLN1	ENST00000314888	human	ensembl	74_37	-1	known	silent	c.3879	p.P1293	1.000	pfam_Vinculin-bd_dom,superfamily_Vinculin/catenin	pfam_Talin_cent,pfam_Vinculin-bd_dom,pfam_ILWEQ_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN1	HGNC	ENSG00000137076				270	0	0	207	99	32.3529
CCIN	0	genome.wustl.edu	37	9	36170043	36170043	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	36170043	36170043	C	T	SNP	CCIN	ENST00000335119	human	ensembl	74_37	+1	known	missense	c.544	p.R182C	1.000	pfam_BACK,smart_BACK	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	CCIN	HGNC	ENSG00000185972				65	0	0	34	23	40.3509
GLIS3	0	genome.wustl.edu	37	9	4118134	4118134	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	4118134	4118134	C	T	SNP	GLIS3	ENST00000381971	human	ensembl	74_37	-1	known	silent	c.1344	p.P448	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS3	HGNC	ENSG00000107249				35	0	0	13	10	43.4783
GLIS3	0	genome.wustl.edu	37	9	4118413	4118413	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	4118413	4118413	G	A	SNP	GLIS3	ENST00000381971	human	ensembl	74_37	-1	known	silent	c.1065	p.R355	0.002	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS3	HGNC	ENSG00000107249				41	0	0	32	20	38.4615
GLIS3	0	genome.wustl.edu	37	9	4118512	4118512	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	4118512	4118512	C	T	SNP	GLIS3	ENST00000381971	human	ensembl	74_37	-1	known	silent	c.966	p.T322	0.795	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS3	HGNC	ENSG00000107249				114	0	0	79	47	37.3016
CBWD6	0	genome.wustl.edu	37	9	69247573	69247573	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	69247573	69247573	C	T	SNP	CBWD6	ENST00000377457	human	ensembl	74_37	-1	known	missense	c.439	p.A147T	1.000	pfam_CobW/HypB/UreG_dom,superfamily_P-loop_NTPase	pfam_CobW/HypB/UreG_dom,pfam_Cbl_biosynth_CobW-like_C,superfamily_P-loop_NTPase,superfamily_Cbl_biosynth_CobW-like_C,smart_Cbl_biosynth_CobW-like_C	-	no_errors	CBWD6	HGNC	ENSG00000204790				95	0	0	64	19	22.8916
PGM5	0	genome.wustl.edu	37	9	70993145	70993145	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	70993145	70993145	A	G	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	missense	c.292	p.I98V	1.000	pfam_A-D-PHexomutase_a/b/a-I,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330				94	0	0	79	6	7.05882
PTPRD	0	genome.wustl.edu	37	9	8341799	8341799	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	8341799	8341799	G	C	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	missense	c.4841	p.T1614S	1.000	smart_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707				236	0	0	101	59	36.875
SPATA31C1	0	genome.wustl.edu	37	9	90535407	90535407	+	RNA	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	90535407	90535407	C	A	SNP	SPATA31C1	ENST00000602681	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.227	-	-	-	no_errors	SPATA31C1	HGNC	ENSG00000230246				265	0	0	229	62	21.3058
SECISBP2	0	genome.wustl.edu	37	9	91964693	91964693	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	91964693	91964693	C	T	SNP	SECISBP2	ENST00000375807	human	ensembl	74_37	+1	known	missense	c.1741	p.P581S	0.001	NULL	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	SECISBP2	HGNC	ENSG00000187742				123	0	0	60	14	18.9189
NOL8	0	genome.wustl.edu	37	9	95077084	95077084	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	95077084	95077084	G	T	SNP	NOL8	ENST00000442668	human	ensembl	74_37	-1	known	missense	c.1823	p.P608H	0.001	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NOL8	HGNC	ENSG00000198000				35	0	0	12	9	42.8571
BICD2	0	genome.wustl.edu	37	9	95481859	95481859	+	Silent	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	95481859	95481859	C	T	SNP	BICD2	ENST00000356884	human	ensembl	74_37	-1	known	silent	c.1068	p.E356	1.000	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc	-	no_errors	BICD2	HGNC	ENSG00000185963				25	0	0	19	4	17.3913
ANKRD19P	0	genome.wustl.edu	37	9	95599403	95599403	+	RNA	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	95599403	95599403	G	A	SNP	ANKRD19P	ENST00000464387	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.715	-	-	-	no_errors	ANKRD19P	HGNC	ENSG00000187984				51	0	0	34	23	40.3509
ENSG00000226668	0	genome.wustl.edu	37	9	95647652	95647652	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	95647652	95647652	C	T	SNP	ENSG00000226668	ENST00000446878	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.062	-	-	-	no_errors	RP11-526D8.7	Clone_based_vega_gene	ENSG00000226668				139	1	0.714286	111	46	29.2994
SUSD3	0	genome.wustl.edu	37	9	95840244	95840244	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	95840244	95840244	G	A	SNP	SUSD3	ENST00000375472	human	ensembl	74_37	+1	known	missense	c.394	p.V132M	0.860	NULL	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD3	HGNC	ENSG00000157303				135	0	0	113	6	5.04202
WNK2	0	genome.wustl.edu	37	9	96051495	96051495	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	96051495	96051495	G	A	SNP	WNK2	ENST00000297954	human	ensembl	74_37	+1	known	missense	c.4570	p.G1524R	0.021	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK2	HGNC	ENSG00000165238				15	0	0	18	8	30.7692
PHF2	0	genome.wustl.edu	37	9	96422584	96422584	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	96422584	96422584	G	A	SNP	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	silent	c.1440	p.P480	0.988	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				25	0	0	19	3	13.6364
PHF2	0	genome.wustl.edu	37	9	96422621	96422621	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	96422621	96422621	A	G	SNP	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	missense	c.1477	p.T493A	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				23	0	0	20	4	16.6667
PHF2	0	genome.wustl.edu	37	9	96422642	96422642	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	96422642	96422642	C	A	SNP	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	missense	c.1498	p.P500T	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				18	0	0	16	4	20
PTCH1	0	genome.wustl.edu	37	9	98209302	98209302	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	98209302	98209302	G	A	SNP	PTCH1	ENST00000331920	human	ensembl	74_37	-1	known	silent	c.4236	p.P1412	1.000	NULL	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920				148	0	0	117	58	33.1429
ERCC6L2	0	genome.wustl.edu	37	9	98729038	98729038	+	RNA	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	98729038	98729038	A	G	SNP	ERCC6L2	ENST00000466840	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ERCC6L2	HGNC	ENSG00000182150				28	0	0	10	13	56.5217
NUTM2G	0	genome.wustl.edu	37	9	99694443	99694443	+	Silent	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	99694443	99694443	C	A	SNP	NUTM2G	ENST00000372322	human	ensembl	74_37	+1	known	silent	c.456	p.S152	0.000	NULL	NULL	-	no_errors	NUTM2G	HGNC	ENSG00000188152				45	0	0	36	12	25
TCEAL5	0	genome.wustl.edu	37	X	102529191	102529191	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	102529191	102529191	G	A	SNP	TCEAL5	ENST00000372680	human	ensembl	74_37	-1	known	missense	c.301	p.R101W	0.000	pfam_TF_A-like/BEX-like	pfam_TF_A-like/BEX-like	-	no_errors	TCEAL5	HGNC	ENSG00000204065				130	0	0	43	87	66.9231
FAM199X	0	genome.wustl.edu	37	X	103430850	103430850	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	103430850	103430850	G	A	SNP	FAM199X	ENST00000493442	human	ensembl	74_37	+1	known	missense	c.521	p.R174Q	1.000	NULL	NULL	-	no_errors	FAM199X	HGNC	ENSG00000123575				66	0	0	19	34	64.1509
FRMPD3	0	genome.wustl.edu	37	X	106845934	106845934	+	Silent	SNP	T	T	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	106845934	106845934	T	C	SNP	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	silent	c.4764	p.P1588	0.883	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234				23	0	0	13	22	62.8571
TRPC5	0	genome.wustl.edu	37	X	111090507	111090507	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	111090507	111090507	C	T	SNP	TRPC5	ENST00000262839	human	ensembl	74_37	-1	known	missense	c.1535	p.R512H	1.000	pfam_Ion_trans_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC5_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC5	HGNC	ENSG00000072315				67	0	0	47	25	34.7222
TENM1	0	genome.wustl.edu	37	X	123526014	123526014	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	123526014	123526014	G	A	SNP	TENM1	ENST00000422452	human	ensembl	74_37	-1	known	missense	c.5576	p.T1859M	0.995	tigrfam_YD	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC	ENSG00000009694				49	0	0	20	17	45.9459
FRMPD4	0	genome.wustl.edu	37	X	12735698	12735698	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	12735698	12735698	A	G	SNP	FRMPD4	ENST00000380682	human	ensembl	74_37	+1	known	missense	c.2753	p.E918G	1.000	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ,pfscan_WW_dom	-	no_errors	FRMPD4	HGNC	ENSG00000169933				90	0	0	92	7	7.07071
ZIC3	0	genome.wustl.edu	37	X	136649856	136649856	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	136649856	136649856	G	A	SNP	ZIC3	ENST00000287538	human	ensembl	74_37	+1	known	missense	c.1006	p.G336R	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC3	HGNC	ENSG00000156925				120	0	0	23	73	76.0417
AFF2	0	genome.wustl.edu	37	X	148055041	148055041	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	148055041	148055041	C	T	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	missense	c.3308	p.A1103V	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				68	0	0	43	6	12.2449
FAM58A	0	genome.wustl.edu	37	X	152853666	152853666	+	RNA	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	152853666	152853666	C	T	SNP	FAM58A	ENST00000276345	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM58A	HGNC	ENSG00000147382				10	0	0	3	6	66.6667
FLNA	0	genome.wustl.edu	37	X	153590103	153590103	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	153590103	153590103	G	T	SNP	FLNA	ENST00000369850	human	ensembl	74_37	-1	known	missense	c.2879	p.P960H	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924				50	0	0	46	4	8
PLXNA3	0	genome.wustl.edu	37	X	153694759	153694759	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	153694759	153694759	C	T	SNP	PLXNA3	ENST00000369682	human	ensembl	74_37	+1	known	missense	c.2840	p.A947V	0.151	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA3	HGNC	ENSG00000130827				129	0	0	119	10	7.75194
NHS	0	genome.wustl.edu	37	X	17744539	17744539	+	Silent	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	17744539	17744539	G	A	SNP	NHS	ENST00000380060	human	ensembl	74_37	+1	known	silent	c.2250	p.A750	0.438	NULL	NULL	-	no_errors	NHS	HGNC	ENSG00000188158				87	0	0	25	52	67.5325
IL1RAPL1	0	genome.wustl.edu	37	X	29973926	29973926	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	29973926	29973926	G	A	SNP	IL1RAPL1	ENST00000302196	human	ensembl	74_37	+1	known	missense	c.2080	p.V694M	1.000	NULL	pfam_TIR_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_TIR_dom,smart_Ig_sub,smart_Ig_sub2,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom	-	no_errors	IL1RAPL1	HGNC	ENSG00000169306				29	0	0	11	14	56
MAGEB1	0	genome.wustl.edu	37	X	30268874	30268874	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	30268874	30268874	G	T	SNP	MAGEB1	ENST00000378981	human	ensembl	74_37	+1	known	missense	c.264	p.E88D	0.000	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB1	HGNC	ENSG00000214107				12	0	0	2	4	66.6667
FAM47C	0	genome.wustl.edu	37	X	37029394	37029394	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	37029394	37029394	G	A	SNP	FAM47C	ENST00000358047	human	ensembl	74_37	+1	known	missense	c.2911	p.D971N	0.003	NULL	NULL	-	no_errors	FAM47C	HGNC	ENSG00000198173				139	0	0	89	5	5.31915
CCNB3	0	genome.wustl.edu	37	X	50053923	50053923	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	50053923	50053923	G	C	SNP	CCNB3	ENST00000276014	human	ensembl	74_37	+1	known	missense	c.2754	p.M918I	0.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082				43	0	0	16	27	62.7907
CXorf67	0	genome.wustl.edu	37	X	51150755	51150755	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	51150755	51150755	C	T	SNP	CXorf67	ENST00000342995	human	ensembl	74_37	+1	known	missense	c.887	p.A296V	0.000	NULL	NULL	-	no_errors	CXorf67	HGNC	ENSG00000187690				13	0	0	2	8	80
ZXDA	0	genome.wustl.edu	37	X	57936601	57936601	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	57936601	57936601	C	T	SNP	ZXDA	ENST00000358697	human	ensembl	74_37	-1	known	missense	c.254	p.G85D	0.711	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDA	HGNC	ENSG00000198205				20	0	0	4	10	71.4286
ITGB1BP2	0	genome.wustl.edu	37	X	70524391	70524391	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	70524391	70524391	G	A	SNP	ITGB1BP2	ENST00000373829	human	ensembl	74_37	+1	known	splice_site	c.754-1	e10-1	1.000	-	-	-	no_errors	ITGB1BP2	HGNC	ENSG00000147166				18	0	0	4	9	69.2308
COX7B	0	genome.wustl.edu	37	X	77158170	77158170	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	77158170	77158170	A	G	SNP	COX7B	ENST00000481445	human	ensembl	74_37	+1	known	missense	c.71	p.Q24R	1.000	pfam_Cyt_c_oxidase_suVIIB	pfam_Cyt_c_oxidase_suVIIB,superfamily_Cyt_c_oxidase_suVIIB_dom	-	no_errors	COX7B	HGNC	ENSG00000131174				34	0	0	8	19	70.3704
DACH2	0	genome.wustl.edu	37	X	86067899	86067899	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	86067899	86067899	G	C	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	missense	c.1281	p.L427F	0.991	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733				38	0	0	7	10	58.8235
DDX3Y	0	genome.wustl.edu	37	Y	15026511	15026511	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	Y	15026511	15026511	C	A	SNP	DDX3Y	ENST00000336079	human	ensembl	74_37	+1	known	missense	c.709	p.L237M	0.509	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX3Y	HGNC	ENSG00000067048				58	0	0	2	2	50
NMNAT1	0	genome.wustl.edu	37	1	10042384	10042385	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	10042384	10042385	-	G	INS	NMNAT1	ENST00000377205	human	ensembl	74_37	+1	known	frame_shift_ins	c.465_466	p.A156fs	0.998:1.000	pfam_Cyt_trans-like,tigrfam_NAMN_adtrnsfrase	pfam_Cyt_trans-like,tigrfam_NAMN_adtrnsfrase	-	no_errors	NMNAT1	HGNC	ENSG00000173614				160	0	0	120	38	24.0506
NTNG1	0	genome.wustl.edu	37	1	107691083	107691083	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	107691083	107691083	A	-	DEL	NTNG1	ENST00000462149	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NTNG1	HGNC	ENSG00000162631				10	0	0	10	4	28.5714
ATXN7L2	0	genome.wustl.edu	37	1	110035319	110035319	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	110035319	110035319	T	-	DEL	ATXN7L2	ENST00000459635	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ATXN7L2	HGNC	ENSG00000162650				37	0	0	35	22	38.5965
OLFML3	0	genome.wustl.edu	37	1	114523959	114523959	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	114523959	114523959	C	-	DEL	OLFML3	ENST00000320334	human	ensembl	74_37	+1	known	frame_shift_del	c.789	p.Y266fs	1.000	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML3	HGNC	ENSG00000116774				126	0	0	82	39	32.2314
MXRA8	0	genome.wustl.edu	37	1	1290110	1290110	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	1290110	1290110	G	-	DEL	MXRA8	ENST00000445648	human	ensembl	74_37	-1	known	frame_shift_del	c.901	p.R301fs	0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	MXRA8	HGNC	ENSG00000162576				33	0	0	24	4	14.2857
MTMR11	0	genome.wustl.edu	37	1	149902648	149902648	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	149902648	149902648	A	-	DEL	MTMR11	ENST00000492824	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				25	0	0	18	8	30.7692
SETDB1	0	genome.wustl.edu	37	1	150917624	150917624	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	150917624	150917624	G	-	DEL	SETDB1	ENST00000368962	human	ensembl	74_37	+1	known	frame_shift_del	c.1180	p.G396fs	0.000	NULL	smart_Tudor	-	no_errors	SETDB1	HGNC	ENSG00000143379				33	0	0	19	8	29.6296
CERS2	0	genome.wustl.edu	37	1	150938724	150938725	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	150938724	150938725	CT	-	DEL	CERS2	ENST00000271688	human	ensembl	74_37	-1	known	frame_shift_del	c.1043_1042	p.S348fs	1.000:1.000	pirsf_Longevity_assurance_LAG1_LAC1	pfam_TLC-dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_TLC-dom,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_TLC-dom,pfscan_Homeobox_dom	-	no_errors	CERS2	HGNC	ENSG00000143418				108	0	0	75	26	25.7426
PYGO2	0	genome.wustl.edu	37	1	154932028	154932028	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	154932028	154932028	G	-	DEL	PYGO2	ENST00000368457	human	ensembl	74_37	-1	known	frame_shift_del	c.448	p.Q150fs	0.997	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PYGO2	HGNC	ENSG00000163348				134	0	0	88	23	20.7207
TMEM79	0	genome.wustl.edu	37	1	156255497	156255498	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	156255497	156255498	-	C	INS	TMEM79	ENST00000295694	human	ensembl	74_37	+1	known	frame_shift_ins	c.480_481	p.R162fs	0.005:0.004	NULL	NULL	-	no_errors	TMEM79	HGNC	ENSG00000163472				89	0	0	83	17	17
NES	0	genome.wustl.edu	37	1	156646931	156646931	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	156646931	156646931	C	-	DEL	NES	ENST00000368223	human	ensembl	74_37	-1	known	frame_shift_del	c.126	p.L43fs	0.307	pfam_IF	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688				20	0	0	19	5	20.8333
SPEN	0	genome.wustl.edu	37	1	16254958	16254959	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	16254958	16254959	CT	-	DEL	SPEN	ENST00000375759	human	ensembl	74_37	+1	known	frame_shift_del	c.2223_2224	p.Q743fs	0.984:0.994	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526				121	0	0	89	33	27.0492
SHCBP1L	0	genome.wustl.edu	37	1	182908369	182908370	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	182908369	182908370	-	T	INS	SHCBP1L	ENST00000367547	human	ensembl	74_37	-1	known	frame_shift_ins	c.1018_1017	p.Y339fs	1.000:0.996	NULL	superfamily_Pectin_lyase_fold/virulence,smart_Carb-bd_sugar_hydrolysis-dom,smart_PbH1	-	no_errors	SHCBP1L	HGNC	ENSG00000157060				80	0	0	27	12	30.7692
DDX59	0	genome.wustl.edu	37	1	200594042	200594042	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	200594042	200594042	T	-	DEL	DDX59	ENST00000447706	human	ensembl	74_37	-1	known	frame_shift_del	c.1730	p.N577fs	0.001	pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Znf_HIT,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX59	HGNC	ENSG00000118197				77	0	0	25	8	24.2424
PPP1R12B	0	genome.wustl.edu	37	1	202407190	202407190	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	202407190	202407190	T	-	DEL	PPP1R12B	ENST00000480184	human	ensembl	74_37	+1	novel	frame_shift_del	c.1496	p.F502fs	0.041	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R12B	HGNC	ENSG00000077157				44	0	0	29	13	30.9524
FMOD	0	genome.wustl.edu	37	1	203316599	203316600	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	203316599	203316600	-	C	INS	FMOD	ENST00000354955	human	ensembl	74_37	-1	known	frame_shift_ins	c.800_799	p.A267fs	0.002:0.001	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	FMOD	HGNC	ENSG00000122176				202	1	0.492611	133	48	26.5193
MAPKAPK2	0	genome.wustl.edu	37	1	206904645	206904646	+	RNA	DEL	GT	GT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	206904645	206904646	GT	-	DEL	MAPKAPK2	ENST00000479009	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MAPKAPK2	HGNC	ENSG00000162889				24	0	0	35	11	23.913
CD46	0	genome.wustl.edu	37	1	207933081	207933082	+	RNA	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	207933081	207933082	-	T	INS	CD46	ENST00000469535	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008:0.015	-	-	-	no_errors	CD46	HGNC	ENSG00000117335				32	0	0	5	6	54.5455
KCNH1	0	genome.wustl.edu	37	1	210857408	210857408	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	210857408	210857408	G	-	DEL	KCNH1	ENST00000271751	human	ensembl	74_37	-1	known	frame_shift_del	c.2185	p.L729fs	1.000	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH1	HGNC	ENSG00000143473				82	0	0	52	21	28.7671
PROX1	0	genome.wustl.edu	37	1	214178556	214178556	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	214178556	214178556	T	-	DEL	PROX1	ENST00000261454	human	ensembl	74_37	+1	known	frame_shift_del	c.1774	p.Y594fs	1.000	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	-	no_errors	PROX1	HGNC	ENSG00000117707				107	0	0	48	22	31.4286
PTPN14	0	genome.wustl.edu	37	1	214557049	214557051	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	214557049	214557051	CCT	-	DEL	PTPN14	ENST00000366956	human	ensembl	74_37	-1	known	in_frame_del	c.2149_2147	p.E716in_frame_del	0.182:0.503:0.995	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN14	HGNC	ENSG00000152104				75	0	0	51	21	29.1667
CAPN2	0	genome.wustl.edu	37	1	223934727	223934727	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	223934727	223934727	G	-	DEL	CAPN2	ENST00000295006	human	ensembl	74_37	+1	known	frame_shift_del	c.589	p.G198fs	1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN2	HGNC	ENSG00000162909				135	0	0	83	34	29.0598
ADCK3	0	genome.wustl.edu	37	1	227171736	227171737	+	RNA	DEL	GG	GG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	227171736	227171737	GG	-	DEL	ADCK3	ENST00000478406	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ADCK3	HGNC	ENSG00000163050				18	0	0	18	2	10
ABCB10	0	genome.wustl.edu	37	1	229653864	229653865	+	RNA	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	229653864	229653865	-	T	INS	ABCB10	ENST00000498158	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	ABCB10	HGNC	ENSG00000135776				11	0	0	7	7	50
EPHB2	0	genome.wustl.edu	37	1	23240246	23240246	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	23240246	23240246	A	-	DEL	EPHB2	ENST00000400191	human	ensembl	74_37	+1	known	frame_shift_del	c.3051	p.K1020fs	0.270	NULL	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHB2	HGNC	ENSG00000133216				20	0	0	16	7	30.4348
RBM34	0	genome.wustl.edu	37	1	235323946	235323947	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	235323946	235323947	-	T	INS	RBM34	ENST00000408888	human	ensembl	74_37	-1	known	frame_shift_ins	c.245_244	p.T82fs	0.962:0.968	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM34	HGNC	ENSG00000188739				101	0	0	77	14	15.3846
TCEB3	0	genome.wustl.edu	37	1	24078404	24078405	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	24078404	24078405	AA	-	DEL	TCEB3	ENST00000418390	human	ensembl	74_37	+1	known	frame_shift_del	c.1387_1388	p.N465fs	0.998:1.000	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,pfscan_F-box_dom	-	no_errors	TCEB3	HGNC	ENSG00000011007				146	0	0	125	53	29.7753
SDCCAG8	0	genome.wustl.edu	37	1	243468023	243468023	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	243468023	243468023	A	-	DEL	SDCCAG8	ENST00000366541	human	ensembl	74_37	+1	known	frame_shift_del	c.684	p.K229fs	0.271	NULL	NULL	-	no_errors	SDCCAG8	HGNC	ENSG00000054282				45	0	0	24	7	22.5806
PTPRU	0	genome.wustl.edu	37	1	29585189	29585189	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	29585189	29585189	C	-	DEL	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	frame_shift_del	c.378	p.L128fs	0.863	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656				180	1	0.552486	119	58	32.7684
FHL3	0	genome.wustl.edu	37	1	38462977	38462977	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	38462977	38462977	T	-	DEL	FHL3	ENST00000475084	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FHL3	HGNC	ENSG00000183386				49	0	0	40	16	28.5714
HIVEP3	0	genome.wustl.edu	37	1	42048868	42048868	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	42048868	42048868	G	-	DEL	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	frame_shift_del	c.1601	p.P534fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				146	0	0	110	51	31.677
TSPAN1	0	genome.wustl.edu	37	1	46650191	46650192	+	RNA	INS	-	-	GG			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	46650191	46650192	-	GG	INS	TSPAN1	ENST00000482143	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TSPAN1	HGNC	ENSG00000117472				99	0	0	74	22	22.9167
AJAP1	0	genome.wustl.edu	37	1	4772068	4772068	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	4772068	4772068	G	-	DEL	AJAP1	ENST00000378190	human	ensembl	74_37	+1	known	frame_shift_del	c.138	p.P48fs	0.294	NULL	NULL	-	no_errors	AJAP1	HGNC	ENSG00000196581				243	0	0	249	37	12.9371
TMEM59	0	genome.wustl.edu	37	1	54502396	54502396	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	54502396	54502396	A	-	DEL	TMEM59	ENST00000470395	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM59	HGNC	ENSG00000116209				19	0	0	9	14	60.8696
RPL22	0	genome.wustl.edu	37	1	6257793	6257794	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	6257793	6257794	-	C	INS	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	frame_shift_ins	c.36_35	p.K13fs	1.000:1.000	NULL	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251				27	0	0	26	5	16.129
DNAJC6	0	genome.wustl.edu	37	1	65851489	65851489	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	65851489	65851489	C	-	DEL	DNAJC6	ENST00000371069	human	ensembl	74_37	+1	known	frame_shift_del	c.895	p.F301fs	1.000	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_C2_dom,smart_DnaJ_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom,pfscan_DnaJ_domain	-	no_errors	DNAJC6	HGNC	ENSG00000116675				98	0	0	65	17	20.7317
KLHL21	0	genome.wustl.edu	37	1	6653565	6653567	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	6653565	6653567	AGA	-	DEL	KLHL21	ENST00000377658	human	ensembl	74_37	-1	known	in_frame_del	c.1654_1652	p.F551in_frame_del	1.000:1.000:1.000	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL21	HGNC	ENSG00000162413				95	0	0	62	18	22.5
PKN2	0	genome.wustl.edu	37	1	89206848	89206848	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	89206848	89206848	A	-	DEL	PKN2	ENST00000370521	human	ensembl	74_37	+1	known	frame_shift_del	c.226	p.S78fs	1.000	pfam_HR1_rho-bd,superfamily_HR1_rho-bd,smart_HR1_rho-bd	pfam_Prot_kinase_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_dom,smart_HR1_rho-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	PKN2	HGNC	ENSG00000065243				22	0	0	19	6	24
CDC7	0	genome.wustl.edu	37	1	91967357	91967357	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	91967357	91967357	A	-	DEL	CDC7	ENST00000234626	human	ensembl	74_37	+1	known	frame_shift_del	c.84	p.N31fs	0.083	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDC7	HGNC	ENSG00000097046				142	1	0.699301	66	39	37.1429
ARHGAP29	0	genome.wustl.edu	37	1	94643144	94643144	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	94643144	94643144	T	-	DEL	ARHGAP29	ENST00000482481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARHGAP29	HGNC	ENSG00000137962				39	0	0	17	7	29.1667
DPYD	0	genome.wustl.edu	37	1	97771791	97771791	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	1	97771791	97771791	A	-	DEL	DPYD	ENST00000370192	human	ensembl	74_37	-1	known	frame_shift_del	c.2121	p.F707fs	1.000	pfam_Dihydroorotate_DH_1_2,pfam_tRNA_hU_synthase,tigrfam_Dihydroorotate_DH	pfam_Dihydroorotate_DH_1_2,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_tRNA_hU_synthase,superfamily_Helical_ferredxn,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_Dihydroorotate_DH	-	no_errors	DPYD	HGNC	ENSG00000188641				238	1	0.41841	161	47	22.5962
GBF1	0	genome.wustl.edu	37	10	104120909	104120909	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	104120909	104120909	A	-	DEL	GBF1	ENST00000476019	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GBF1	HGNC	ENSG00000107862				46	0	0	22	9	29.0323
SMC3	0	genome.wustl.edu	37	10	112361549	112361551	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	112361549	112361551	GAA	-	DEL	SMC3	ENST00000361804	human	ensembl	74_37	+1	known	in_frame_del	c.2799_2801	p.K936in_frame_del	0.928:1.000:1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	-	no_errors	SMC3	HGNC	ENSG00000108055				107	0	0	84	15	15.1515
ATE1	0	genome.wustl.edu	37	10	123673353	123673353	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	123673353	123673353	T	-	DEL	ATE1	ENST00000224652	human	ensembl	74_37	-1	known	frame_shift_del	c.289	p.M97fs	1.000	pfam_Arg_tRNA_PTrfase_N,pirsf_Arg-tRNA-P_Trfase_1_euk	pfam_Arg-tRNA-P_Trfase_C,pfam_Arg_tRNA_PTrfase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_Arg-tRNA-P_Trfase_1_euk	-	no_errors	ATE1	HGNC	ENSG00000107669				52	0	0	27	13	32.5
CCDC3	0	genome.wustl.edu	37	10	12940430	12940431	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	12940430	12940431	-	G	INS	CCDC3	ENST00000378825	human	ensembl	74_37	-1	known	frame_shift_ins	c.799_798	p.Y266fs	0.987:0.964	NULL	NULL	-	no_errors	CCDC3	HGNC	ENSG00000151468				48	0	0	46	22	32.3529
FUOM	0	genome.wustl.edu	37	10	135169074	135169074	+	RNA	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	135169074	135169074	C	-	DEL	FUOM	ENST00000478895	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FUOM	HGNC	ENSG00000148803				28	0	0	32	17	34.6939
FRMD4A	0	genome.wustl.edu	37	10	13696452	13696452	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	13696452	13696452	G	-	DEL	FRMD4A	ENST00000357447	human	ensembl	74_37	-1	known	frame_shift_del	c.3014	p.P1005fs	1.000	NULL	pfam_DUF3338,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	-	no_errors	FRMD4A	HGNC	ENSG00000151474				147	0	0	57	30	34.4828
GPR158	0	genome.wustl.edu	37	10	25886928	25886928	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	25886928	25886928	C	-	DEL	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	frame_shift_del	c.2373	p.P793fs	1.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025				153	0	0	134	44	24.7191
PFKP	0	genome.wustl.edu	37	10	3172106	3172106	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	3172106	3172106	G	-	DEL	PFKP	ENST00000381125	human	ensembl	74_37	+1	known	frame_shift_del	c.1779	p.L596fs	1.000	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,tigrfam_6-phosphofructokinase_euk	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	-	no_errors	PFKP	HGNC	ENSG00000067057				111	0	0	110	36	24.6575
PITRM1	0	genome.wustl.edu	37	10	3207632	3207632	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	3207632	3207632	A	-	DEL	PITRM1	ENST00000380989	human	ensembl	74_37	-1	known	frame_shift_del	c.506	p.F169fs	1.000	pfam_Pept_M16_N,superfamily_Metalloenz_LuxS/M16	pfam_Peptidase_M16C_assoc,pfam_Peptidase_M16_C,pfam_Pept_M16_N,superfamily_Metalloenz_LuxS/M16	-	no_errors	PITRM1	HGNC	ENSG00000107959				44	0	0	28	6	17.6471
C10orf68	0	genome.wustl.edu	37	10	33018277	33018277	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	33018277	33018277	A	-	DEL	C10orf68	ENST00000375025	human	ensembl	74_37	+1	known	frame_shift_del	c.718	p.K242fs	0.000	NULL	NULL	-	no_errors	C10orf68	HGNC	ENSG00000150076				98	0	0	26	14	35
ASAH2	0	genome.wustl.edu	37	10	52005194	52005194	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	52005194	52005194	A	-	DEL	ASAH2	ENST00000395526	human	ensembl	74_37	-1	known	frame_shift_del	c.148	p.S50fs	0.000	NULL	pfam_Ceramidase_alk	-	no_errors	ASAH2	HGNC	ENSG00000188611				36	0	0	29	15	34.0909
PRKG1	0	genome.wustl.edu	37	10	54048574	54048574	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	54048574	54048574	A	-	DEL	PRKG1	ENST00000373980	human	ensembl	74_37	+1	known	frame_shift_del	c.1798	p.N601fs	1.000	pirsf_cGMP-dependent_protein_kinase,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_cGMP-dependent_protein_kinase,pfam_Prot_kinase_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_dom	-	no_errors	PRKG1	HGNC	ENSG00000185532				62	0	0	43	15	25.8621
JMJD1C	0	genome.wustl.edu	37	10	64960289	64960289	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	64960289	64960289	T	-	DEL	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	frame_shift_del	c.5223	p.G1742fs	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988				49	0	0	23	3	11.5385
CTNNA3	0	genome.wustl.edu	37	10	67680207	67680208	+	Frame_Shift_Ins	INS	-	-	TT			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	67680207	67680208	-	TT	INS	CTNNA3	ENST00000373744	human	ensembl	74_37	-1	known	frame_shift_ins	c.2569_2568	p.P856fs	1.000:0.996	pfam_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA3	HGNC	ENSG00000183230				187	0	0	72	32	30.7692
DNA2	0	genome.wustl.edu	37	10	70182521	70182521	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	70182521	70182521	A	-	DEL	DNA2	ENST00000399180	human	ensembl	74_37	-1	known	frame_shift_del	c.2593	p.S865fs	1.000	superfamily_P-loop_NTPase	pfam_DNA_replication_fac_Dna2_N,superfamily_P-loop_NTPase	-	no_errors	DNA2	HGNC	ENSG00000138346				55	0	0	38	9	19.1489
TET1	0	genome.wustl.edu	37	10	70450889	70450890	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	70450889	70450890	-	C	INS	TET1	ENST00000373644	human	ensembl	74_37	+1	known	frame_shift_ins	c.5729_5730	p.T1912fs	0.001:0.005	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336				88	0	0	88	29	24.7863
ENSG00000200294	0	genome.wustl.edu	37	10	73940733	73940733	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	73940733	73940733	T	-	DEL	ENSG00000200294	ENST00000363424	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.371	-	-	-	no_errors	SNORA36	RFAM	ENSG00000200294				8	0	0	7	6	46.1538
ZSWIM8	0	genome.wustl.edu	37	10	75560546	75560546	+	RNA	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	75560546	75560546	C	-	DEL	ZSWIM8	ENST00000603195	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.749	-	-	-	no_errors	ZSWIM8	HGNC	ENSG00000214655				26	0	0	24	8	25
KCNMA1	0	genome.wustl.edu	37	10	79397264	79397266	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	79397264	79397266	GAG	-	DEL	KCNMA1	ENST00000406533	human	ensembl	74_37	-1	known	in_frame_del	c.137_135	p.S49in_frame_del	0.437:0.428:0.382	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_RCK_N,prints_K_chnl_Ca-activ_BK_asu,prints_K_chnl	-	no_errors	KCNMA1	HGNC	ENSG00000156113				16	0	0	6	5	45.4545
ENTPD1-AS1	0	genome.wustl.edu	37	10	97515949	97515949	+	RNA	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	10	97515949	97515949	G	-	DEL	ENTPD1-AS1	ENST00000416301	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.906	-	-	-	no_errors	ENTPD1-AS1	HGNC	ENSG00000226688				9	0	0	10	4	28.5714
NPAT	0	genome.wustl.edu	37	11	108044068	108044069	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	108044068	108044069	-	T	INS	NPAT	ENST00000278612	human	ensembl	74_37	-1	known	frame_shift_ins	c.1643_1642	p.S548fs	0.000:0.000	NULL	smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	NPAT	HGNC	ENSG00000149308				56	0	0	39	13	25
DDX10	0	genome.wustl.edu	37	11	108544239	108544239	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	108544239	108544239	A	-	DEL	DDX10	ENST00000322536	human	ensembl	74_37	+1	known	frame_shift_del	c.232	p.T80fs	0.988	pfscan_RNA_helicase_DEAD_Q_motif	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX10	HGNC	ENSG00000178105				55	0	0	28	9	24.3243
HSPB2	0	genome.wustl.edu	37	11	111784474	111784475	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	111784474	111784475	CT	-	DEL	HSPB2	ENST00000304298	human	ensembl	74_37	+1	known	frame_shift_del	c.404_405	p.S137fs	0.534:0.112	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	HSPB2	Uniprot_gn	ENSG00000170276				76	0	0	59	25	29.7619
REXO2	0	genome.wustl.edu	37	11	114320750	114320750	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	114320750	114320750	T	-	DEL	REXO2	ENST00000544507	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	REXO2	HGNC	ENSG00000076043				82	0	0	50	17	25.3731
DSCAML1	0	genome.wustl.edu	37	11	117299188	117299188	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	117299188	117299188	G	-	DEL	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	frame_shift_del	c.6198	p.S2067fs	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				28	0	0	30	6	16.6667
NLRX1	0	genome.wustl.edu	37	11	119050611	119050611	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	119050611	119050611	G	-	DEL	NLRX1	ENST00000292199	human	ensembl	74_37	+1	known	frame_shift_del	c.1881	p.L630fs	1.000	NULL	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRX1	HGNC	ENSG00000160703				108	0	0	103	6	5.50459
SORL1	0	genome.wustl.edu	37	11	121475905	121475905	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	121475905	121475905	A	-	DEL	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	frame_shift_del	c.4735	p.M1581fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642				145	0	0	79	33	29.4643
OR8D4	0	genome.wustl.edu	37	11	123777442	123777442	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	123777442	123777442	T	-	DEL	OR8D4	ENST00000321355	human	ensembl	74_37	+1	known	frame_shift_del	c.304	p.F104fs	0.939	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8D4	HGNC	ENSG00000181518				352	0	0	163	80	32.9218
OR8D2	0	genome.wustl.edu	37	11	124189773	124189773	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	124189773	124189773	A	-	DEL	OR8D2	ENST00000357438	human	ensembl	74_37	-1	known	frame_shift_del	c.321	p.F107fs	0.919	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8D2	HGNC	ENSG00000197263				57	0	0	43	17	28.3333
ROBO3	0	genome.wustl.edu	37	11	124747920	124747921	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	124747920	124747921	-	G	INS	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	frame_shift_ins	c.3074_3075	p.E1027fs	0.307:0.197	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134				20	0	0	17	7	29.1667
CCDC15	0	genome.wustl.edu	37	11	124857645	124857646	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	124857645	124857646	-	T	INS	CCDC15	ENST00000344762	human	ensembl	74_37	+1	known	frame_shift_ins	c.1523_1524	p.L510fs	0.000:0.002	NULL	NULL	-	no_errors	CCDC15	HGNC	ENSG00000149548				229	0	0	167	57	25.4464
DUSP8	0	genome.wustl.edu	37	11	1577819	1577820	+	Frame_Shift_Del	DEL	CG	CG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CG	CG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	1577819	1577820	CG	-	DEL	DUSP8	ENST00000331588	human	ensembl	74_37	-1	known	frame_shift_del	c.1807_1806	p.G603fs	0.233:0.104	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP8	HGNC	ENSG00000184545				8	0	0	2	4	66.6667
KRTAP5-1	0	genome.wustl.edu	37	11	1606326	1606326	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	1606326	1606326	C	-	DEL	KRTAP5-1	ENST00000382171	human	ensembl	74_37	-1	known	frame_shift_del	c.154	p.V52fs	0.995	NULL	NULL	-	no_errors	KRTAP5-1	HGNC	ENSG00000205869				303	0	0	315	117	27.0833
KRTAP5-4	0	genome.wustl.edu	37	11	1643193	1643193	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	1643193	1643193	C	-	DEL	KRTAP5-4	ENST00000399682	human	ensembl	74_37	-1	known	frame_shift_del	c.131	p.G44fs	0.986	NULL	NULL	-	no_errors	KRTAP5-4	HGNC	ENSG00000241598				169	0	0	230	24	9.44882
ARL14EP	0	genome.wustl.edu	37	11	30352754	30352754	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	30352754	30352754	A	-	DEL	ARL14EP	ENST00000282032	human	ensembl	74_37	+1	known	frame_shift_del	c.259	p.N89fs	1.000	NULL	NULL	-	no_errors	ARL14EP	HGNC	ENSG00000152219				114	1	0.869565	68	32	32
FBXO3	0	genome.wustl.edu	37	11	33792304	33792304	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	33792304	33792304	T	-	DEL	FBXO3	ENST00000265651	human	ensembl	74_37	-1	known	frame_shift_del	c.177	p.K59fs	1.000	superfamily_F-box_dom	pfam_ApaG_domain,pfam_F-box_dom,superfamily_ApaG_domain,superfamily_F-box_dom,smart_F-box_dom,smart_SMI1/KNR4_like_dom,pfscan_ApaG_domain,pfscan_F-box_dom	-	no_errors	FBXO3	HGNC	ENSG00000110429				395	0	0	252	99	28.2051
GYLTL1B	0	genome.wustl.edu	37	11	45948373	45948373	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	45948373	45948373	C	-	DEL	GYLTL1B	ENST00000325468	human	ensembl	74_37	+1	known	frame_shift_del	c.1276	p.R428fs	0.023	NULL	pfam_Glyco_trans_8	-	no_errors	GYLTL1B	HGNC	ENSG00000165905				78	0	0	54	12	18.1818
PSMC3	0	genome.wustl.edu	37	11	47440673	47440674	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	47440673	47440674	CA	-	DEL	PSMC3	ENST00000298852	human	ensembl	74_37	-1	known	frame_shift_del	c.1203_1202	p.V401fs	1.000:1.000	superfamily_P-loop_NTPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC3	HGNC	ENSG00000165916				105	0	0	108	15	12.1951
OR5M3	0	genome.wustl.edu	37	11	56237709	56237709	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	56237709	56237709	T	-	DEL	OR5M3	ENST00000312240	human	ensembl	74_37	-1	known	frame_shift_del	c.265	p.T89fs	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M3	HGNC	ENSG00000174937				146	0	0	80	11	12.0879
FAM111B	0	genome.wustl.edu	37	11	58892377	58892377	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	58892377	58892377	A	-	DEL	FAM111B	ENST00000343597	human	ensembl	74_37	+1	known	frame_shift_del	c.807	p.K272fs	0.000	NULL	superfamily_Trypsin-like_Pept_dom	-	no_errors	FAM111B	HGNC	ENSG00000189057				41	0	0	35	20	36.3636
VWCE	0	genome.wustl.edu	37	11	61044094	61044094	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	61044094	61044094	G	-	DEL	VWCE	ENST00000335613	human	ensembl	74_37	-1	known	frame_shift_del	c.1466	p.P489fs	0.008	smart_VWC_out,smart_VWF_C	pfam_VWF_C,pfam_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWF_C,smart_VWC_out,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	VWCE	HGNC	ENSG00000167992				52	0	0	29	6	17.1429
PHRF1	0	genome.wustl.edu	37	11	610707	610709	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	610707	610709	GGA	-	DEL	PHRF1	ENST00000264555	human	ensembl	74_37	+1	known	in_frame_del	c.4623_4625	p.E1543in_frame_del	0.000:0.973:1.000	NULL	pfam_Znf_PHD-finger,pfam_Znf_C3HC4_RING-type,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	PHRF1	HGNC	ENSG00000070047				53	0	0	43	13	23.2143
RTN3	0	genome.wustl.edu	37	11	63525656	63525656	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	63525656	63525656	A	-	DEL	RTN3	ENST00000377819	human	ensembl	74_37	+1	known	frame_shift_del	c.3082	p.K1030fs	1.000	pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN3	HGNC	ENSG00000133318				55	0	0	9	19	67.8571
MEN1	0	genome.wustl.edu	37	11	64572093	64572093	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	64572093	64572093	G	-	DEL	MEN1	ENST00000337652	human	ensembl	74_37	-1	known	frame_shift_del	c.1561	p.R521fs	0.999	pfam_Menin	pfam_Menin	-	no_errors	MEN1	HGNC	ENSG00000133895				27	0	0	30	10	25
MALAT1	0	genome.wustl.edu	37	11	65268919	65268919	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	65268919	65268919	T	-	DEL	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562				20	0	0	18	11	37.931
BRMS1	0	genome.wustl.edu	37	11	66108714	66108714	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	66108714	66108714	C	-	DEL	BRMS1	ENST00000425825	human	ensembl	74_37	-1	known	frame_shift_del	c.321	p.L108fs	0.992	pfam_Sds3	pfam_Sds3	-	no_errors	BRMS1	HGNC	ENSG00000174744				81	0	0	56	28	33.3333
OR2AT4	0	genome.wustl.edu	37	11	74800160	74800161	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	74800160	74800161	-	G	INS	OR2AT4	ENST00000305159	human	ensembl	74_37	-1	known	frame_shift_ins	c.599_598	p.Q200fs	0.816:0.565	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Olfact_rcpt	-	no_errors	OR2AT4	HGNC	ENSG00000171561				33	0	0	28	10	26.3158
USP35	0	genome.wustl.edu	37	11	77920855	77920856	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	77920855	77920856	-	C	INS	USP35	ENST00000529308	human	ensembl	74_37	+1	known	frame_shift_ins	c.1954_1955	p.T655fs	0.000:0.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP35	HGNC	ENSG00000118369				27	0	0	33	8	19.5122
USP35	0	genome.wustl.edu	37	11	77920856	77920856	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	77920856	77920856	C	-	DEL	USP35	ENST00000529308	human	ensembl	74_37	+1	known	frame_shift_del	c.1955	p.T655fs	0.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP35	HGNC	ENSG00000118369				27	0	0	31	10	24.3902
RIC3	0	genome.wustl.edu	37	11	8159967	8159968	+	RNA	DEL	AA	AA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	8159967	8159968	AA	-	DEL	RIC3	ENST00000524799	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RIC3	HGNC	ENSG00000166405				42	0	0	32	10	23.8095
RIC3	0	genome.wustl.edu	37	11	8161538	8161539	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	11	8161538	8161539	-	A	INS	RIC3	ENST00000309737	human	ensembl	74_37	-1	known	frame_shift_ins	c.327_326	p.L109fs	0.946:1.000	NULL	NULL	-	no_errors	RIC3	HGNC	ENSG00000166405				79	0	0	58	17	22.6667
UHRF1BP1L	0	genome.wustl.edu	37	12	100451840	100451840	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	100451840	100451840	G	-	DEL	UHRF1BP1L	ENST00000279907	human	ensembl	74_37	-1	known	frame_shift_del	c.3215	p.P1072fs	0.844	NULL	NULL	-	no_errors	UHRF1BP1L	HGNC	ENSG00000111647				127	0	0	82	21	20.3883
MYBPC1	0	genome.wustl.edu	37	12	102043102	102043102	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	102043102	102043102	A	-	DEL	MYBPC1	ENST00000361466	human	ensembl	74_37	+1	known	frame_shift_del	c.1261	p.K422fs	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC1	HGNC	ENSG00000196091				110	0	0	67	40	37.3832
NT5DC3	0	genome.wustl.edu	37	12	104182803	104182804	+	RNA	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	104182803	104182804	-	A	INS	NT5DC3	ENST00000474268	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NT5DC3	HGNC	ENSG00000111696				23	0	0	18	6	25
SLC41A2	0	genome.wustl.edu	37	12	105198777	105198777	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	105198777	105198777	A	-	DEL	SLC41A2	ENST00000549713	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.849	-	-	-	no_errors	SLC41A2	HGNC	ENSG00000136052				30	0	0	24	5	17.2414
HECTD4	0	genome.wustl.edu	37	12	112601005	112601005	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	112601005	112601005	C	-	DEL	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	frame_shift_del	c.12445	p.A4149fs	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064				117	0	0	115	8	6.50407
OAS2	0	genome.wustl.edu	37	12	113435331	113435331	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	113435331	113435331	A	-	DEL	OAS2	ENST00000342315	human	ensembl	74_37	+1	known	frame_shift_del	c.634	p.I214fs	0.000	pfam_2-5-oligoAdlate_synth_1_dom2/C	pfam_2-5-oligoAdlate_synth_1_dom2/C,pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	-	no_errors	OAS2	HGNC	ENSG00000111335				79	0	0	55	20	26.6667
PRB3	0	genome.wustl.edu	37	12	11420683	11420683	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	11420683	11420683	G	-	DEL	PRB3	ENST00000381842	human	ensembl	74_37	-1	known	frame_shift_del	c.500	p.P167fs	0.257	NULL	NULL	-	no_errors	PRB3	HGNC	ENSG00000197870				615	0	0	392	57	12.6949
PRB3	0	genome.wustl.edu	37	12	11420746	11420746	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	11420746	11420746	G	-	DEL	PRB3	ENST00000381842	human	ensembl	74_37	-1	known	frame_shift_del	c.437	p.P146fs	0.997	NULL	NULL	-	no_errors	PRB3	HGNC	ENSG00000197870				634	0	0	454	40	8.09717
NOS1	0	genome.wustl.edu	37	12	117703229	117703230	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	117703229	117703230	-	C	INS	NOS1	ENST00000317775	human	ensembl	74_37	-1	known	frame_shift_ins	c.2028_2027	p.C677fs	1.000:1.000	pfam_NO_synthase_oxygenase_dom,superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_euk,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250				18	0	0	18	6	25
HNF1A	0	genome.wustl.edu	37	12	121432118	121432118	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	121432118	121432118	C	-	DEL	HNF1A	ENST00000257555	human	ensembl	74_37	+1	known	frame_shift_del	c.865	p.P291fs	1.000	pfam_HNF1b_C	pfam_HNF1b_C,pfam_HNF-1_N,pfam_HNF1a_C,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_HNF1_dimer_dom,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HNF1A	HGNC	ENSG00000135100				19	0	0	14	15	51.7241
VPS37B	0	genome.wustl.edu	37	12	123351892	123351892	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	123351892	123351892	G	-	DEL	VPS37B	ENST00000267202	human	ensembl	74_37	-1	known	frame_shift_del	c.629	p.P210fs	0.609	NULL	pfam_Mod_r	-	no_errors	VPS37B	HGNC	ENSG00000139722				21	0	0	22	5	18.5185
NCOR2	0	genome.wustl.edu	37	12	124856837	124856837	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	124856837	124856837	G	-	DEL	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	frame_shift_del	c.2538	p.A847fs	0.010	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498				57	0	0	40	21	34.4262
GPR19	0	genome.wustl.edu	37	12	12814274	12814274	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	12814274	12814274	T	-	DEL	GPR19	ENST00000332427	human	ensembl	74_37	-1	known	frame_shift_del	c.1109	p.N370fs	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR19	HGNC	ENSG00000183150				202	0	0	95	37	28.0303
TMEM132D	0	genome.wustl.edu	37	12	130184704	130184705	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	130184704	130184705	-	G	INS	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	frame_shift_ins	c.619_618	p.T206fs	0.073:0.027	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952				64	0	0	51	11	17.7419
STX2	0	genome.wustl.edu	37	12	131283100	131283100	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	131283100	131283100	T	-	DEL	STX2	ENST00000392373	human	ensembl	74_37	-1	known	frame_shift_del	c.756	p.A253fs	0.955	pfam_T_SNARE_dom,smart_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_Syntaxin_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX2	HGNC	ENSG00000111450				113	0	0	62	26	29.5455
EP400	0	genome.wustl.edu	37	12	132547093	132547094	+	In_Frame_Ins	INS	-	-	CAG			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	132547093	132547094	-	CAG	INS	EP400	ENST00000333577	human	ensembl	74_37	+1	known	in_frame_ins	c.8289_8290	p.2767in_frame_insQ	0.900:0.920	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				83	0	0	84	17	16.8317
PLEKHA5	0	genome.wustl.edu	37	12	19460408	19460408	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	19460408	19460408	A	-	DEL	PLEKHA5	ENST00000510738	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.931	-	-	-	no_errors	PLEKHA5	HGNC	ENSG00000052126				22	0	0	15	12	44.4444
PLEKHA5	0	genome.wustl.edu	37	12	19522710	19522711	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	19522710	19522711	AT	-	DEL	PLEKHA5	ENST00000317589	human	ensembl	74_37	+1	known	frame_shift_del	c.3529_3530	p.M1177fs	1.000:1.000	NULL	pfam_Pleckstrin_homology,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA5	HGNC	ENSG00000052126				67	0	0	45	11	19.6429
CACNA1C	0	genome.wustl.edu	37	12	2760757	2760757	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	2760757	2760757	C	-	DEL	CACNA1C	ENST00000344100	human	ensembl	74_37	+1	known	frame_shift_del	c.3963	p.P1323fs	0.003	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067				106	0	0	111	10	8.26446
TMTC1	0	genome.wustl.edu	37	12	29689236	29689236	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	29689236	29689236	T	-	DEL	TMTC1	ENST00000256062	human	ensembl	74_37	-1	known	frame_shift_del	c.1367	p.K456fs	0.929	pfam_PIK-rel_kinase_FAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687				145	0	0	76	28	26.9231
KDM5A	0	genome.wustl.edu	37	12	416953	416953	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	416953	416953	T	-	DEL	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	frame_shift_del	c.3597	p.G1200fs	0.987	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614				144	1	0.689655	73	38	34.2342
ARID2	0	genome.wustl.edu	37	12	46230646	46230648	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	46230646	46230648	GAG	-	DEL	ARID2	ENST00000334344	human	ensembl	74_37	+1	known	in_frame_del	c.895_897	p.E300in_frame_del	1.000:1.000:1.000	superfamily_ARM-type_fold	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC	ENSG00000189079				123	0	0	59	29	32.9545
WNT1	0	genome.wustl.edu	37	12	49374348	49374348	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	49374348	49374348	G	-	DEL	WNT1	ENST00000293549	human	ensembl	74_37	+1	known	frame_shift_del	c.500	p.G169fs	1.000	pfam_Wnt,smart_Wnt,prints_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt1	-	no_errors	WNT1	HGNC	ENSG00000125084				19	0	0	30	5	14.2857
KMT2D	0	genome.wustl.edu	37	12	49420302	49420303	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	49420302	49420303	AA	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_del	c.15447_15446	p.F5149fs	0.974:1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				86	0	0	75	43	36.4407
KRT6A	0	genome.wustl.edu	37	12	52886577	52886578	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	52886577	52886578	-	G	INS	KRT6A	ENST00000330722	human	ensembl	74_37	-1	known	frame_shift_ins	c.396_395	p.G133fs	0.996:1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6A	HGNC	ENSG00000205420				122	0	0	117	24	17.0213
SMARCC2	0	genome.wustl.edu	37	12	56559113	56559113	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	56559113	56559113	G	-	DEL	SMARCC2	ENST00000267064	human	ensembl	74_37	-1	known	frame_shift_del	c.3128	p.P1043fs	1.000	NULL	pfam_SWIRM,pfam_SANT/Myb,superfamily_Homeodomain-like,superfamily_BRCT_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_SANT/Myb,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	SMARCC2	HGNC	ENSG00000139613				128	0	0	100	19	15.9664
MARS	0	genome.wustl.edu	37	12	57882014	57882014	+	RNA	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	57882014	57882014	G	-	DEL	MARS	ENST00000548146	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	MARS	HGNC	ENSG00000166986				75	0	0	48	25	34.2466
ARHGEF25	0	genome.wustl.edu	37	12	58007272	58007274	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	58007272	58007274	AGA	-	DEL	ARHGEF25	ENST00000333972	human	ensembl	74_37	+1	known	in_frame_del	c.575_577	p.K195in_frame_del	1.000:1.000:1.000	superfamily_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF25	HGNC	ENSG00000240771				176	0	0	98	27	21.6
VWF	0	genome.wustl.edu	37	12	6128170	6128170	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	6128170	6128170	C	-	DEL	VWF	ENST00000261405	human	ensembl	74_37	-1	known	frame_shift_del	c.4414	p.D1472fs	0.000	pirsf_VWF	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				58	0	0	34	17	33.3333
TMBIM4	0	genome.wustl.edu	37	12	66531937	66531937	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	66531937	66531937	A	-	DEL	TMBIM4	ENST00000358230	human	ensembl	74_37	-1	known	frame_shift_del	c.520	p.Y174fs	0.028	pfam_Bax_inhibitor_1-related	pfam_Bax_inhibitor_1-related	-	no_errors	TMBIM4	HGNC	ENSG00000155957				67	0	0	42	12	22.2222
ATN1	0	genome.wustl.edu	37	12	7045027	7045028	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	7045027	7045028	-	C	INS	ATN1	ENST00000356654	human	ensembl	74_37	+1	known	frame_shift_ins	c.597_598	p.T201fs	1.000:1.000	NULL	pfam_Atrophin-like,prints_Atrophin-1	-	no_errors	ATN1	HGNC	ENSG00000111676				118	0	0	89	32	26.4463
ATN1	0	genome.wustl.edu	37	12	7045880	7045885	+	In_Frame_Del	DEL	CAGCAA	CAGCAA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CAGCAA	CAGCAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	7045880	7045885	CAGCAA	-	DEL	ATN1	ENST00000356654	human	ensembl	74_37	+1	known	in_frame_del	c.1450_1455	p.QQ487in_frame_del	1.000:0.999:0.993:0.986:0.850:0.049	pfam_Atrophin-like	pfam_Atrophin-like,prints_Atrophin-1	-	no_errors	ATN1	HGNC	ENSG00000111676				319	0	0	375	20	5.06329
PTPRB	0	genome.wustl.edu	37	12	70989964	70989964	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	70989964	70989964	C	-	DEL	PTPRB	ENST00000334414	human	ensembl	74_37	-1	known	frame_shift_del	c.1123	p.V375fs	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRB	HGNC	ENSG00000127329				77	0	0	48	13	21.3115
LGR5	0	genome.wustl.edu	37	12	71977724	71977724	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	71977724	71977724	T	-	DEL	LGR5	ENST00000266674	human	ensembl	74_37	+1	known	frame_shift_del	c.1934	p.F646fs	1.000	pfam_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_Leu-rich_rpt,pfam_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	LGR5	HGNC	ENSG00000139292				126	0	0	77	7	8.33333
CEP290	0	genome.wustl.edu	37	12	88449444	88449444	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	12	88449444	88449444	T	-	DEL	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	frame_shift_del	c.6875	p.N2292fs	0.987	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707				9	0	0	5	5	50
CDC16	0	genome.wustl.edu	37	13	115012591	115012591	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	115012591	115012591	T	-	DEL	CDC16	ENST00000494581	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CDC16	HGNC	ENSG00000130177				9	0	0	5	3	37.5
PDS5B	0	genome.wustl.edu	37	13	33344888	33344889	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	33344888	33344889	AA	-	DEL	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	frame_shift_del	c.4161_4162	p.N1390fs	0.002:0.002	NULL	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642				12	0	0	24	16	40
NBEA	0	genome.wustl.edu	37	13	35733663	35733663	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	35733663	35733663	A	-	DEL	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	frame_shift_del	c.3355	p.N1121fs	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				50	0	0	23	16	41.0256
NBEA	0	genome.wustl.edu	37	13	36125104	36125104	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	36125104	36125104	A	-	DEL	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	frame_shift_del	c.6741	p.V2250fs	0.214	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				58	0	0	38	13	25.4902
SUPT20H	0	genome.wustl.edu	37	13	37599382	37599382	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	37599382	37599382	A	-	DEL	SUPT20H	ENST00000476539	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.270	-	-	-	no_errors	SUPT20H	HGNC	ENSG00000102710				47	0	0	29	13	30.9524
EDNRB	0	genome.wustl.edu	37	13	78475267	78475267	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	13	78475267	78475267	A	-	DEL	EDNRB	ENST00000334286	human	ensembl	74_37	-1	known	frame_shift_del	c.877	p.Y293fs	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Endthln_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ETB_rcpt,prints_Endthln_rcpt,prints_GPCR_Rhodpsn,prints_Bombsn_rcpt	-	no_errors	EDNRB	HGNC	ENSG00000136160				75	0	0	31	16	34.0426
WDR20	0	genome.wustl.edu	37	14	102675067	102675067	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	102675067	102675067	C	-	DEL	WDR20	ENST00000454394	human	ensembl	74_37	+1	known	frame_shift_del	c.653	p.H220fs	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR20	HGNC	ENSG00000140153				42	0	0	33	15	31.25
CRIP2	0	genome.wustl.edu	37	14	105944683	105944683	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	105944683	105944683	G	-	DEL	CRIP2	ENST00000329146	human	ensembl	74_37	+1	known	frame_shift_del	c.124	p.G43fs	0.998	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	CRIP2	HGNC	ENSG00000182809				16	0	0	16	7	30.4348
ACIN1	0	genome.wustl.edu	37	14	23530746	23530746	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	23530746	23530746	G	-	DEL	ACIN1	ENST00000262710	human	ensembl	74_37	-1	known	frame_shift_del	c.3359	p.P1120fs	0.996	NULL	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	ACIN1	HGNC	ENSG00000100813				32	0	0	29	5	14.7059
AKAP6	0	genome.wustl.edu	37	14	33015029	33015029	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	33015029	33015029	A	-	DEL	AKAP6	ENST00000280979	human	ensembl	74_37	+1	known	frame_shift_del	c.1170	p.R392fs	0.987	NULL	smart_Spectrin/alpha-actinin	-	no_errors	AKAP6	HGNC	ENSG00000151320				104	0	0	63	34	35.0515
MIS18BP1	0	genome.wustl.edu	37	14	45693721	45693722	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	45693721	45693722	-	T	INS	MIS18BP1	ENST00000310806	human	ensembl	74_37	-1	known	frame_shift_ins	c.2069_2068	p.S690fs	0.004:0.797	NULL	pfam_SANTA,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MIS18BP1	HGNC	ENSG00000129534				154	0	0	74	23	23.7113
OTX2	0	genome.wustl.edu	37	14	57271049	57271049	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	57271049	57271049	G	-	DEL	OTX2	ENST00000339475	human	ensembl	74_37	-1	known	frame_shift_del	c.130	p.R44fs	0.947	superfamily_Homeodomain-like,pfscan_Homeobox_dom	pfam_Otx_TF_C,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Otx2_TF,prints_Otx_TF	-	no_errors	OTX2	HGNC	ENSG00000165588				92	0	0	48	22	31.4286
ARID4A	0	genome.wustl.edu	37	14	58825910	58825911	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	58825910	58825911	-	A	INS	ARID4A	ENST00000355431	human	ensembl	74_37	+1	known	frame_shift_ins	c.1914_1915	p.Q640fs	1.000:1.000	superfamily_Chromodomain-like,smart_Chromo_domain/shadow	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,smart_Chromo_domain/shadow,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4A	HGNC	ENSG00000032219				94	0	0	47	8	14.5455
KCNH5	0	genome.wustl.edu	37	14	63174303	63174303	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	63174303	63174303	G	-	DEL	KCNH5	ENST00000322893	human	ensembl	74_37	-1	known	frame_shift_del	c.2890	p.Q964fs	1.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH5	HGNC	ENSG00000140015				289	0	0	199	40	16.7364
DPF3	0	genome.wustl.edu	37	14	73159844	73159844	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	73159844	73159844	C	-	DEL	DPF3	ENST00000366353	human	ensembl	74_37	-1	known	frame_shift_del	c.847	p.D283fs	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	DPF3	HGNC	ENSG00000205683				186	0	0	125	47	27.3256
ENSG00000258891	0	genome.wustl.edu	37	14	74363249	74363249	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	74363249	74363249	T	-	DEL	ENSG00000258891	ENST00000554009	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP5-1021I20.5	Clone_based_vega_gene	ENSG00000258891				90	0	0	38	14	26.9231
DIO2	0	genome.wustl.edu	37	14	80677760	80677760	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	80677760	80677760	A	-	DEL	DIO2	ENST00000422005	human	ensembl	74_37	-1	known	frame_shift_del	c.56	p.F19fs	1.000	pfam_Iodothyronine_deiodinase	pfam_Iodothyronine_deiodinase	-	no_errors	DIO2	HGNC	ENSG00000211448				31	0	0	34	13	27.6596
GPR65	0	genome.wustl.edu	37	14	88477555	88477555	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	88477555	88477555	T	-	DEL	GPR65	ENST00000267549	human	ensembl	74_37	+1	known	frame_shift_del	c.364	p.F124fs	0.992	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Psych_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Psych_rcpt,prints_GPCR_Rhodpsn	-	no_errors	GPR65	HGNC	ENSG00000140030				261	1	0.381679	139	50	26.455
MOAP1	0	genome.wustl.edu	37	14	93650552	93650552	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	14	93650552	93650552	C	-	DEL	MOAP1	ENST00000298894	human	ensembl	74_37	-1	known	frame_shift_del	c.36	p.M13fs	0.639	NULL	NULL	-	no_errors	MOAP1	HGNC	ENSG00000165943				207	1	0.480769	163	60	26.9058
OCA2	0	genome.wustl.edu	37	15	28200304	28200305	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	28200304	28200305	-	T	INS	OCA2	ENST00000354638	human	ensembl	74_37	-1	known	frame_shift_ins	c.1842_1841	p.H615fs	1.000:1.000	pfam_Cit_transptr-like_dom,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	-	no_errors	OCA2	HGNC	ENSG00000104044				196	0	0	103	31	23.1343
CHRNA7	0	genome.wustl.edu	37	15	32404035	32404036	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	32404035	32404036	-	G	INS	CHRNA7	ENST00000454250	human	ensembl	74_37	+1	known	frame_shift_ins	c.372_373	p.V125fs	0.021:0.969	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA7	HGNC	ENSG00000175344				188	0	0	123	12	8.88889
PAK6	0	genome.wustl.edu	37	15	40558255	40558255	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	40558255	40558255	C	-	DEL	PAK6	ENST00000260404	human	ensembl	74_37	+1	known	frame_shift_del	c.417	p.H141fs	0.954	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CRIB_dom,superfamily_Kinase-like_dom,smart_CRIB_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRIB_dom,pfscan_Prot_kinase_dom	-	no_errors	PAK6	HGNC	ENSG00000137843				15	0	0	14	7	33.3333
UBR1	0	genome.wustl.edu	37	15	43252855	43252855	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	43252855	43252855	T	-	DEL	UBR1	ENST00000290650	human	ensembl	74_37	-1	known	frame_shift_del	c.4745	p.N1582fs	0.838	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR1	HGNC	ENSG00000159459				68	0	0	37	12	24.4898
B2M	0	genome.wustl.edu	37	15	45007824	45007825	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	45007824	45007825	-	C	INS	B2M	ENST00000544417	human	ensembl	74_37	+1	known	frame_shift_ins	c.271_272	p.T93fs	0.816:0.591	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	B2M	HGNC	ENSG00000166710				137	0	0	78	31	28.4404
SLTM	0	genome.wustl.edu	37	15	59186129	59186129	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	59186129	59186129	T	-	DEL	SLTM	ENST00000380516	human	ensembl	74_37	-1	known	frame_shift_del	c.1539	p.E514fs	0.997	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SLTM	HGNC	ENSG00000137776				65	0	0	39	13	25
NOX5	0	genome.wustl.edu	37	15	69331226	69331226	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	69331226	69331226	T	-	DEL	NOX5	ENST00000388866	human	ensembl	74_37	+1	known	frame_shift_del	c.1401	p.H470fs	0.970	pfam_FAD-bd_8,superfamily_Riboflavin_synthase-like_b-brl	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NOX5	HGNC	ENSG00000255346				221	1	0.45045	92	87	48.6034
LOC645752	0	genome.wustl.edu	37	15	78207401	78207402	+	RNA	INS	-	-	TTG			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	78207401	78207402	-	TTG	INS	LOC645752	ENST00000563349	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.120:0.131	-	-	-	no_errors	RP11-114H24.2	Clone_based_vega_gene	ENSG00000260776				16	0	0	14	7	33.3333
IREB2	0	genome.wustl.edu	37	15	78777134	78777134	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	78777134	78777134	A	-	DEL	IREB2	ENST00000258886	human	ensembl	74_37	+1	known	frame_shift_del	c.1445	p.K483fs	1.000	pfam_Acoase/IPM_deHydtase_lsu_aba,superfamily_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	IREB2	HGNC	ENSG00000136381				56	0	0	30	14	31.8182
AKAP13	0	genome.wustl.edu	37	15	86227941	86227941	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	15	86227941	86227941	A	-	DEL	AKAP13	ENST00000558092	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.013	-	-	-	no_errors	AKAP13	HGNC	ENSG00000170776				46	0	0	32	11	25.5814
NDE1	0	genome.wustl.edu	37	16	15788046	15788046	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	15788046	15788046	C	-	DEL	NDE1	ENST00000396353	human	ensembl	74_37	+1	known	frame_shift_del	c.728	p.L245fs	0.982	pfam_NUDE_C	pfam_NUDE_C	-	no_errors	NDE1	HGNC	ENSG00000072864				52	0	0	36	10	21.7391
ABCC6P1	0	genome.wustl.edu	37	16	18584280	18584280	+	RNA	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	18584280	18584280	C	-	DEL	ABCC6P1	ENST00000546162	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	ABCC6P1	HGNC	ENSG00000256340				85	0	0	83	13	13.5417
ENSG00000261312	0	genome.wustl.edu	37	16	19718153	19718153	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	19718153	19718153	A	-	DEL	ENSG00000261312	ENST00000565916	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.126	-	-	-	no_errors	AC002550.5	Clone_based_vega_gene	ENSG00000261312				129	0	0	84	60	41.6667
TNRC6A	0	genome.wustl.edu	37	16	24788376	24788381	+	In_Frame_Del	DEL	CAGCAG	CAGCAG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CAGCAG	CAGCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	24788376	24788381	CAGCAG	-	DEL	TNRC6A	ENST00000395799	human	ensembl	74_37	+1	known	in_frame_del	c.286_291	p.QQ99in_frame_del	0.731:0.088:0.099:0.114:0.075:0.064	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6A	HGNC	ENSG00000090905				61	0	0	76	21	21.6495
PRRT2	0	genome.wustl.edu	37	16	29825016	29825016	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	29825016	29825016	C	-	DEL	PRRT2	ENST00000567659	human	ensembl	74_37	+1	known	frame_shift_del	c.641	p.R217fs	1.000	NULL	pfam_CD225/Dispanin_fam	-	no_errors	PRRT2	HGNC	ENSG00000167371				23	0	0	16	8	33.3333
ITGAD	0	genome.wustl.edu	37	16	31422111	31422111	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	31422111	31422111	C	-	DEL	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	frame_shift_del	c.1268	p.R425fs	0.992	smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886				129	0	0	68	34	33.3333
LOC100134368	0	genome.wustl.edu	37	16	436712	436714	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	436712	436714	AAA	-	DEL	LOC100134368	ENST00000457760	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001:0.000	-	-	-	no_errors	Z97634.3	Clone_based_vega_gene	ENSG00000236829				24	0	0	9	2	18.1818
DNAJA2	0	genome.wustl.edu	37	16	47005467	47005468	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	47005467	47005468	AA	-	DEL	DNAJA2	ENST00000317089	human	ensembl	74_37	-1	known	frame_shift_del	c.156_155	p.F52fs	1.000:1.000	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain	pfam_DnaJ_C,pfam_DnaJ_domain,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_domain,pfscan_DnaJ_domain,pfscan_HSP_DnaJ_Cys-rich_dom,prints_DnaJ_domain	-	no_errors	DNAJA2	HGNC	ENSG00000069345				147	0	0	78	44	36.0656
GLYR1	0	genome.wustl.edu	37	16	4862228	4862229	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	4862228	4862229	-	C	INS	GLYR1	ENST00000321919	human	ensembl	74_37	-1	known	frame_shift_ins	c.1141_1140	p.R380fs	0.990:0.170	pfam_6PGDH_NADP-bd	pfam_6PGDH_NADP-bd,pfam_PWWP_dom,superfamily_6-PGluconate_DH_C-like,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	GLYR1	HGNC	ENSG00000140632				75	0	0	39	25	39.0625
FHOD1	0	genome.wustl.edu	37	16	67267851	67267852	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	67267851	67267852	-	G	INS	FHOD1	ENST00000258201	human	ensembl	74_37	-1	known	frame_shift_ins	c.1755_1754	p.P586fs	0.867:1.000	NULL	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD1	HGNC	ENSG00000135723				21	0	0	27	5	15.625
AP1G1	0	genome.wustl.edu	37	16	71803440	71803440	+	Splice_Site	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	16	71803440	71803440	A	-	DEL	AP1G1	ENST00000423132	human	ensembl	74_37	-1	known	splice_site_del	c.643-1	e6-1	0.996	-	-	-	no_errors	AP1G1	HGNC	ENSG00000166747				33	0	0	14	7	33.3333
MPRIP	0	genome.wustl.edu	37	17	17046886	17046886	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	17046886	17046886	C	-	DEL	MPRIP	ENST00000395811	human	ensembl	74_37	+1	known	frame_shift_del	c.1052	p.P353fs	0.999	NULL	pfam_Pleckstrin_homology,superfamily_Ferritin-like_SF,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	MPRIP	HGNC	ENSG00000133030				35	0	0	24	10	29.4118
FLCN	0	genome.wustl.edu	37	17	17119709	17119709	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	17119709	17119709	G	-	DEL	FLCN	ENST00000285071	human	ensembl	74_37	-1	known	frame_shift_del	c.1285	p.H429fs	1.000	NULL	pfam_Folliculin	-	no_errors	FLCN	HGNC	ENSG00000154803				46	0	0	37	17	31.4815
SPECC1	0	genome.wustl.edu	37	17	20108263	20108263	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	20108263	20108263	A	-	DEL	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	frame_shift_del	c.901	p.N303fs	0.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487				128	0	0	90	61	40.3974
UBBP4	0	genome.wustl.edu	37	17	21731034	21731034	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	21731034	21731034	C	-	DEL	UBBP4	ENST00000578713	human	ensembl	74_37	+1	putative	frame_shift_del	c.336	p.D115fs	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBBP4	HGNC	ENSG00000263563				106	0	0	77	10	11.4943
BLMH	0	genome.wustl.edu	37	17	28616399	28616399	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	28616399	28616399	A	-	DEL	BLMH	ENST00000261714	human	ensembl	74_37	-1	known	frame_shift_del	c.313	p.W105fs	1.000	pfam_Peptidase_C1B,pirsf_Peptidase_C1B	pfam_Peptidase_C1B,pirsf_Peptidase_C1B	-	no_errors	BLMH	HGNC	ENSG00000108578				39	0	0	18	4	18.1818
EVI2B	0	genome.wustl.edu	37	17	29632034	29632035	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	29632034	29632035	-	T	INS	EVI2B	ENST00000544462	human	ensembl	74_37	-1	known	frame_shift_ins	c.639_638	p.N213fs	0.000:0.000	NULL	NULL	-	no_errors	EVI2B	HGNC	ENSG00000185862				174	0	0	98	40	28.9855
PIGW	0	genome.wustl.edu	37	17	34893474	34893474	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	34893474	34893474	T	-	DEL	PIGW	ENST00000328396	human	ensembl	74_37	+1	known	frame_shift_del	c.524	p.F176fs	1.000	pirsf_GWT1	pfam_GWT1,pirsf_GWT1	-	no_errors	PIGW	HGNC	ENSG00000184886				230	0	0	125	46	26.9006
FKBP10	0	genome.wustl.edu	37	17	39969327	39969328	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	39969327	39969328	-	C	INS	FKBP10	ENST00000321562	human	ensembl	74_37	+1	known	frame_shift_ins	c.41_42	p.L16fs	0.985:0.990	NULL	pfam_PPIase_FKBP_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP10	HGNC	ENSG00000141756				40	0	0	55	11	16.6667
STAT5B	0	genome.wustl.edu	37	17	40379600	40379600	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	40379600	40379600	C	-	DEL	STAT5B	ENST00000293328	human	ensembl	74_37	-1	known	frame_shift_del	c.232	p.E78fs	1.000	pfam_STAT_TF_prot_interaction,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5B	HGNC	ENSG00000173757				96	0	0	72	33	31.4286
ENSG00000266962	0	genome.wustl.edu	37	17	40705710	40705711	+	RNA	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	40705710	40705711	-	G	INS	ENSG00000266962	ENST00000590513	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-400F19.6	Clone_based_vega_gene	ENSG00000266962				26	0	0	24	10	29.4118
CCDC43	0	genome.wustl.edu	37	17	42756253	42756253	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	42756253	42756253	T	-	DEL	CCDC43	ENST00000315286	human	ensembl	74_37	-1	known	frame_shift_del	c.646	p.R216fs	1.000	NULL	NULL	-	no_errors	CCDC43	HGNC	ENSG00000180329				39	0	0	36	8	18.1818
MYBBP1A	0	genome.wustl.edu	37	17	4448203	4448204	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	4448203	4448204	CT	-	DEL	MYBBP1A	ENST00000381556	human	ensembl	74_37	-1	known	frame_shift_del	c.2324_2323	p.S775fs	0.122:0.131	pfam_DNA_pol_V,superfamily_ARM-type_fold	pfam_DNA_pol_V,superfamily_ARM-type_fold	-	no_errors	MYBBP1A	HGNC	ENSG00000132382				27	0	0	27	8	22.8571
ENSG00000248278	0	genome.wustl.edu	37	17	46952263	46952264	+	RNA	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	46952263	46952264	-	T	INS	ENSG00000248278	ENST00000508743	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.845:0.923	-	-	-	no_errors	RP11-463M16.4	Clone_based_vega_gene	ENSG00000248278				49	0	0	37	14	27.451
XYLT2	0	genome.wustl.edu	37	17	48433967	48433967	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	48433967	48433967	C	-	DEL	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	frame_shift_del	c.1578	p.G529fs	1.000	pfam_XylT	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532				123	0	0	94	29	23.5772
RNF43	0	genome.wustl.edu	37	17	56435161	56435161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	56435161	56435161	C	-	DEL	RNF43	ENST00000407977	human	ensembl	74_37	-1	known	frame_shift_del	c.1976	p.G659fs	0.900	NULL	pfam_Znf_C3HC4_RING-type,superfamily_PAS,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375				222	0	0	87	122	58.3732
TBX4	0	genome.wustl.edu	37	17	59560345	59560345	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	59560345	59560345	C	-	DEL	TBX4	ENST00000393853	human	ensembl	74_37	+1	known	frame_shift_del	c.1109	p.P372fs	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX4	HGNC	ENSG00000121075				45	0	0	37	23	38.3333
GNA13	0	genome.wustl.edu	37	17	63010667	63010667	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	63010667	63010667	A	-	DEL	GNA13	ENST00000439174	human	ensembl	74_37	-1	known	frame_shift_del	c.842	p.F281fs	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_12	-	no_errors	GNA13	HGNC	ENSG00000120063				170	0	0	73	18	19.7802
ABCA5	0	genome.wustl.edu	37	17	67246059	67246059	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	67246059	67246059	A	-	DEL	ABCA5	ENST00000392677	human	ensembl	74_37	-1	known	frame_shift_del	c.4755	p.F1585fs	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA5	HGNC	ENSG00000154265				62	0	0	22	7	24.1379
SENP3	0	genome.wustl.edu	37	17	7466956	7466956	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	7466956	7466956	C	-	DEL	SENP3	ENST00000429205	human	ensembl	74_37	+1	known	frame_shift_del	c.563	p.R190fs	1.000	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP3	HGNC	ENSG00000161956				28	0	0	9	8	47.0588
TNRC6C	0	genome.wustl.edu	37	17	76046980	76046980	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	76046980	76046980	A	-	DEL	TNRC6C	ENST00000335749	human	ensembl	74_37	+1	known	frame_shift_del	c.1837	p.N615fs	0.960	NULL	pfam_Argonaute_hook_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TNRC6C	HGNC	ENSG00000078687				120	0	0	73	26	26.2626
CHD3	0	genome.wustl.edu	37	17	7798765	7798765	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	7798765	7798765	C	-	DEL	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	frame_shift_del	c.1612	p.R540fs	0.007	superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004				175	0	0	152	9	5.59006
LOC100294362	0	genome.wustl.edu	37	17	78327661	78327661	+	RNA	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	17	78327661	78327661	G	-	DEL	LOC100294362	ENST00000575034	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2047H16.4	Clone_based_vega_gene	ENSG00000263069				8	0	0	12	3	20
LAMA3	0	genome.wustl.edu	37	18	21451595	21451595	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	21451595	21451595	C	-	DEL	LAMA3	ENST00000313654	human	ensembl	74_37	+1	known	frame_shift_del	c.4968	p.P1658fs	0.998	pfam_EGF_laminin,superfamily_Growth_fac_rcpt_N_dom	pfam_EGF_laminin,pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Growth_fac_rcpt_N_dom,superfamily_Galactose-bd-like,superfamily_STAT_TF_coiled-coil,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA3	HGNC	ENSG00000053747				18	0	0	21	8	27.5862
OSBPL1A	0	genome.wustl.edu	37	18	21745097	21745097	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	21745097	21745097	T	-	DEL	OSBPL1A	ENST00000319481	human	ensembl	74_37	-1	known	frame_shift_del	c.2682	p.K894fs	0.958	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447				232	0	0	121	38	23.8994
NDC80	0	genome.wustl.edu	37	18	2601452	2601452	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	2601452	2601452	A	-	DEL	NDC80	ENST00000261597	human	ensembl	74_37	+1	known	frame_shift_del	c.1432	p.M480fs	0.996	superfamily_t-SNARE	pfam_Kinetochore_Ndc80,superfamily_t-SNARE	-	no_errors	NDC80	HGNC	ENSG00000080986				37	0	0	11	7	38.8889
EPG5	0	genome.wustl.edu	37	18	43459143	43459143	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	43459143	43459143	A	-	DEL	EPG5	ENST00000282041	human	ensembl	74_37	-1	known	frame_shift_del	c.5704	p.Y1902fs	1.000	NULL	NULL	-	no_errors	EPG5	HGNC	ENSG00000152223				107	0	0	70	17	19.5402
SMAD7	0	genome.wustl.edu	37	18	46474795	46474795	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	46474795	46474795	G	-	DEL	SMAD7	ENST00000262158	human	ensembl	74_37	-1	known	frame_shift_del	c.626	p.P209fs	1.000	superfamily_SMAD_FHA_domain	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD7	HGNC	ENSG00000101665				105	1	0.943396	39	6	13.3333
CXXC1	0	genome.wustl.edu	37	18	47810449	47810449	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	47810449	47810449	G	-	DEL	CXXC1	ENST00000412036	human	ensembl	74_37	-1	known	frame_shift_del	c.1240	p.Q414fs	1.000	pfam_CpG-bd_C	pfam_CpG-bd_C,pfam_Znf_CXXC,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	CXXC1	HGNC	ENSG00000154832				111	0	0	70	30	30
ENSG00000267040	0	genome.wustl.edu	37	18	55335787	55335789	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	55335787	55335789	AAA	-	DEL	ENSG00000267040	ENST00000592201	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	RP11-35G9.3	Clone_based_vega_gene	ENSG00000267040				33	0	0	24	4	14.2857
ALPK2	0	genome.wustl.edu	37	18	56246941	56246941	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	56246941	56246941	A	-	DEL	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	frame_shift_del	c.1067	p.L356fs	1.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796				108	0	0	66	35	34.6535
LMAN1	0	genome.wustl.edu	37	18	57013194	57013194	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	57013194	57013194	T	-	DEL	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	frame_shift_del	c.912	p.E305fs	0.898	superfamily_HMG_box_dom	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf,superfamily_HMG_box_dom	-	no_errors	LMAN1	HGNC	ENSG00000074695				143	1	0.694444	81	40	33.0579
LMAN1	0	genome.wustl.edu	37	18	57013284	57013285	+	Splice_Site	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	57013284	57013285	-	T	INS	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	splice_site_ins	c.823-2_823-1	e8-1	1.000:1.000	-	-	-	no_errors	LMAN1	HGNC	ENSG00000074695				121	0	0	94	30	24.1935
SERPINB10	0	genome.wustl.edu	37	18	61584738	61584739	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	61584738	61584739	-	A	INS	SERPINB10	ENST00000238508	human	ensembl	74_37	+1	known	frame_shift_ins	c.217_218	p.R76fs	0.991:0.998	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB10	HGNC	ENSG00000242550				21	0	0	13	7	35
SERPINB8	0	genome.wustl.edu	37	18	61652327	61652328	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	61652327	61652328	-	A	INS	SERPINB8	ENST00000353706	human	ensembl	74_37	+1	known	frame_shift_ins	c.568_569	p.T193fs	0.996:0.750	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB8	HGNC	ENSG00000166401				92	0	0	38	13	25.4902
ZNF236	0	genome.wustl.edu	37	18	74593430	74593430	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	74593430	74593430	A	-	DEL	ZNF236	ENST00000253159	human	ensembl	74_37	+1	known	frame_shift_del	c.1373	p.M461fs	0.988	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF236	HGNC	ENSG00000130856				90	0	0	93	41	30.597
ZNF236	0	genome.wustl.edu	37	18	74639295	74639295	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	18	74639295	74639295	G	-	DEL	ZNF236	ENST00000253159	human	ensembl	74_37	+1	known	frame_shift_del	c.4230	p.E1412fs	0.299	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF236	HGNC	ENSG00000130856				130	0	0	88	38	30.1587
ECSIT	0	genome.wustl.edu	37	19	11618821	11618821	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	11618821	11618821	G	-	DEL	ECSIT	ENST00000270517	human	ensembl	74_37	-1	known	frame_shift_del	c.781	p.Q261fs	0.504	pfam_ECSIT	pfam_ECSIT	-	no_errors	ECSIT	HGNC	ENSG00000130159				177	1	0.561798	105	45	30
ZNF20	0	genome.wustl.edu	37	19	12244669	12244670	+	Frame_Shift_Ins	INS	-	-	CA			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	12244669	12244670	-	CA	INS	ZNF20	ENST00000334213	human	ensembl	74_37	-1	known	frame_shift_ins	c.332_331	p.G111fs	0.713:0.982	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF20	HGNC	ENSG00000132010				365	0	0	228	77	25.2459
ZNF443	0	genome.wustl.edu	37	19	12541062	12541062	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	12541062	12541062	T	-	DEL	ZNF443	ENST00000301547	human	ensembl	74_37	-1	known	frame_shift_del	c.1924	p.T642fs	0.999	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF443	HGNC	ENSG00000180855				186	0	0	106	19	15.2
CIRBP	0	genome.wustl.edu	37	19	1271433	1271433	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	1271433	1271433	G	-	DEL	CIRBP	ENST00000444172	human	ensembl	74_37	+1	known	frame_shift_del	c.157	p.G54fs	0.997	NULL	NULL	-	no_errors	CIRBP	HGNC	ENSG00000099622				275	0	0	149	64	30.0469
FBXW9	0	genome.wustl.edu	37	19	12800973	12800974	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	12800973	12800974	-	C	INS	FBXW9	ENST00000380339	human	ensembl	74_37	-1	known	frame_shift_ins	c.925_924	p.P308fs	0.001:0.002	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW9	HGNC	ENSG00000132004				33	0	0	34	12	26.087
ASNA1	0	genome.wustl.edu	37	19	12858847	12858848	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	12858847	12858848	-	G	INS	ASNA1	ENST00000357332	human	ensembl	74_37	+1	known	frame_shift_ins	c.976_977	p.A328fs	1.000:1.000	pfam_Anion-transp_ATPase-like_dom,superfamily_P-loop_NTPase,tigrfam_ATPase_ArsA/GET3	pfam_Anion-transp_ATPase-like_dom,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,superfamily_P-loop_NTPase,tigrfam_ATPase_ArsA/GET3	-	no_errors	ASNA1	HGNC	ENSG00000198356				107	0	0	89	27	23.2759
PKN1	0	genome.wustl.edu	37	19	14562741	14562741	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	14562741	14562741	C	-	DEL	PKN1	ENST00000342216	human	ensembl	74_37	+1	known	frame_shift_del	c.1089	p.F366fs	0.060	superfamily_C2_dom	pfam_Prot_kinase_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_dom,smart_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	PKN1	HGNC	ENSG00000123143				40	0	0	22	7	24.1379
REXO1	0	genome.wustl.edu	37	19	1827647	1827647	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	1827647	1827647	T	-	DEL	REXO1	ENST00000170168	human	ensembl	74_37	-1	known	frame_shift_del	c.1141	p.T381fs	0.001	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	REXO1	HGNC	ENSG00000079313				41	0	0	31	13	29.5455
C19orf12	0	genome.wustl.edu	37	19	30193594	30193594	+	RNA	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	30193594	30193594	C	-	DEL	C19orf12	ENST00000392275	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C19orf12	HGNC	ENSG00000131943				76	0	0	59	16	21.3333
TSHZ3	0	genome.wustl.edu	37	19	31769142	31769142	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	31769142	31769142	C	-	DEL	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	frame_shift_del	c.1557	p.D521fs	0.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297				236	0	0	135	59	30.4124
TSHZ3	0	genome.wustl.edu	37	19	31770237	31770238	+	In_Frame_Ins	INS	-	-	CTG			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	31770237	31770238	-	CTG	INS	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	in_frame_ins	c.462_461	p.158in_frame_insS	1.000:1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297				27	0	0	35	7	16.6667
KMT2B	0	genome.wustl.edu	37	19	36215931	36215935	+	Frame_Shift_Del	DEL	CTGGA	CTGGA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CTGGA	CTGGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	36215931	36215935	CTGGA	-	DEL	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	frame_shift_del	c.3471_3475	p.T1159fs	1.000:1.000:1.000:1.000:1.000	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				120	0	0	25	17	40.4762
PIP5K1C	0	genome.wustl.edu	37	19	3648643	3648645	+	In_Frame_Del	DEL	GAT	GAT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GAT	GAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	3648643	3648645	GAT	-	DEL	PIP5K1C	ENST00000537021	human	ensembl	74_37	-1	known	in_frame_del	c.1191_1189	p.I397in_frame_del	0.633:0.998:1.000	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP5K1C	HGNC	ENSG00000186111				129	0	0	108	33	23.4043
ZNF540	0	genome.wustl.edu	37	19	38103018	38103018	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	38103018	38103018	T	-	DEL	ZNF540	ENST00000316433	human	ensembl	74_37	+1	known	frame_shift_del	c.837	p.F281fs	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF540	HGNC	ENSG00000171817				53	0	0	20	10	33.3333
HNRNPL	0	genome.wustl.edu	37	19	39330959	39330959	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	39330959	39330959	G	-	DEL	HNRNPL	ENST00000221419	human	ensembl	74_37	-1	known	frame_shift_del	c.1010	p.P337fs	1.000	tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	HNRNPL	HGNC	ENSG00000104824				28	0	0	25	6	19.3548
NUMBL	0	genome.wustl.edu	37	19	41183178	41183178	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	41183178	41183178	C	-	DEL	NUMBL	ENST00000252891	human	ensembl	74_37	-1	known	frame_shift_del	c.689	p.G230fs	1.000	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pirsf_Numb/numb-like,pfscan_PTB/PI_dom	-	no_errors	NUMBL	HGNC	ENSG00000105245				20	0	0	19	11	36.6667
EXOC3L2	0	genome.wustl.edu	37	19	45716496	45716496	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	45716496	45716496	G	-	DEL	EXOC3L2	ENST00000252482	human	ensembl	74_37	-1	known	frame_shift_del	c.1061	p.P354fs	0.365	NULL	pfam_Sec6,superfamily_Tet_transcr_reg_TetR-rel_C	-	no_errors	EXOC3L2	HGNC	ENSG00000130201				54	0	0	32	8	20
FOXA3	0	genome.wustl.edu	37	19	46375988	46375988	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	46375988	46375988	C	-	DEL	FOXA3	ENST00000302177	human	ensembl	74_37	+1	known	frame_shift_del	c.725	p.A244fs	0.049	NULL	pfam_TF_fork_head,pfam_Fork-head_N,pfam_Forkhead_box_C,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXA3	HGNC	ENSG00000170608				17	0	0	14	7	33.3333
ENSG00000205790	0	genome.wustl.edu	37	19	4682879	4682880	+	RNA	DEL	AG	AG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	4682879	4682880	AG	-	DEL	ENSG00000205790	ENST00000381796	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.006	-	-	-	no_errors	AC005594.3	Clone_based_vega_gene	ENSG00000205790				15	0	0	11	4	26.6667
MIR498	0	genome.wustl.edu	37	19	54177457	54177457	+	RNA	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	54177457	54177457	C	-	DEL	MIR498	ENST00000385134	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MIR498	HGNC	ENSG00000207869				144	0	0	144	11	7.09677
VSTM1	0	genome.wustl.edu	37	19	54544249	54544249	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	54544249	54544249	G	-	DEL	VSTM1	ENST00000338372	human	ensembl	74_37	-1	known	frame_shift_del	c.677	p.P226fs	0.005	NULL	smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM1	HGNC	ENSG00000189068				49	0	0	33	10	23.2558
ENSG00000267865	0	genome.wustl.edu	37	19	56220431	56220431	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	56220431	56220431	T	-	DEL	ENSG00000267865	ENST00000596293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2611O12.8	Clone_based_vega_gene	ENSG00000267865				43	0	0	16	4	20
SNAPC2	0	genome.wustl.edu	37	19	7987213	7987213	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	7987213	7987213	C	-	DEL	SNAPC2	ENST00000221573	human	ensembl	74_37	+1	known	frame_shift_del	c.666	p.E224fs	0.005	pfam_SnAPC_su2-like	pfam_SnAPC_su2-like	-	no_errors	SNAPC2	HGNC	ENSG00000104976				139	0	0	94	37	28.2443
MUC16	0	genome.wustl.edu	37	19	9059156	9059157	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	9059156	9059157	-	T	INS	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	frame_shift_ins	c.28290_28289	p.N9430fs	0.003:0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				139	0	0	115	47	29.0123
MUC16	0	genome.wustl.edu	37	19	9076020	9076020	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	19	9076020	9076020	T	-	DEL	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	frame_shift_del	c.11426	p.K3809fs	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				325	0	0	194	81	29.4545
SLC35F5	0	genome.wustl.edu	37	2	114500277	114500278	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	114500277	114500278	AA	-	DEL	SLC35F5	ENST00000245680	human	ensembl	74_37	-1	known	frame_shift_del	c.742_741	p.F247fs	1.000:1.000	pfam_DMT	pfam_DMT	-	no_errors	SLC35F5	HGNC	ENSG00000115084				119	1	0.833333	54	41	43.1579
GREB1	0	genome.wustl.edu	37	2	11706699	11706699	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	11706699	11706699	C	-	DEL	GREB1	ENST00000234142	human	ensembl	74_37	+1	known	frame_shift_del	c.371	p.S126fs	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1	HGNC	ENSG00000196208				156	0	0	93	38	29.0076
SMPD4	0	genome.wustl.edu	37	2	130921967	130921967	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	130921967	130921967	T	-	DEL	SMPD4	ENST00000409031	human	ensembl	74_37	-1	known	frame_shift_del	c.961	p.M321fs	0.991	NULL	NULL	-	no_errors	SMPD4	HGNC	ENSG00000136699				94	0	0	63	13	17.1053
LRP1B	0	genome.wustl.edu	37	2	141032033	141032034	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	141032033	141032034	-	C	INS	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	frame_shift_ins	c.13102_13101	p.H4367fs	0.999:0.016	smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				112	0	0	55	19	25.6757
ACVR2A	0	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	148683686	148683686	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.1303	p.K437fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				127	0	0	39	54	58.0645
GALNT5	0	genome.wustl.edu	37	2	158152992	158152993	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	158152992	158152993	-	A	INS	GALNT5	ENST00000259056	human	ensembl	74_37	+1	known	frame_shift_ins	c.1964_1965	p.N657fs	1.000:1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT5	HGNC	ENSG00000136542				63	0	0	27	7	20.5882
DPP4	0	genome.wustl.edu	37	2	162891779	162891780	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	162891779	162891780	-	A	INS	DPP4	ENST00000360534	human	ensembl	74_37	-1	known	frame_shift_ins	c.669_668	p.L223fs	1.000:1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP4	HGNC	ENSG00000197635				85	0	0	50	21	29.5775
IFIH1	0	genome.wustl.edu	37	2	163134716	163134716	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	163134716	163134716	T	-	DEL	IFIH1	ENST00000263642	human	ensembl	74_37	-1	known	frame_shift_del	c.1764	p.A589fs	1.000	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_CARD,superfamily_P-loop_NTPase,superfamily_DEATH-like_dom,superfamily_ARM-type_fold,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	IFIH1	HGNC	ENSG00000115267				45	0	0	18	7	28
NCKAP1	0	genome.wustl.edu	37	2	183806893	183806894	+	Splice_Site	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	183806893	183806894	-	A	INS	NCKAP1	ENST00000360982	human	ensembl	74_37	-1	known	splice_site_ins	c.2620-3_2620-2	e25-2	0.999:0.019	-	-	-	no_errors	NCKAP1	HGNC	ENSG00000061676				90	0	0	37	23	38.3333
ITGAV	0	genome.wustl.edu	37	2	187521085	187521085	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	187521085	187521085	G	-	DEL	ITGAV	ENST00000261023	human	ensembl	74_37	+1	known	frame_shift_del	c.1676	p.G561fs	0.609	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGAV	HGNC	ENSG00000138448				216	0	0	188	64	25.3968
NT5C1B	0	genome.wustl.edu	37	2	18765869	18765871	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	18765869	18765871	GCT	-	DEL	NT5C1B	ENST00000359846	human	ensembl	74_37	-1	known	in_frame_del	c.814_812	p.Q271in_frame_del	0.009:0.011:0.004	NULL	pfam_5-nucleotidase	-	no_errors	NT5C1B	HGNC	ENSG00000185013				23	0	0	32	4	11.1111
SGOL2	0	genome.wustl.edu	37	2	201436992	201436992	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	201436992	201436992	A	-	DEL	SGOL2	ENST00000357799	human	ensembl	74_37	+1	known	frame_shift_del	c.1923	p.G644fs	0.002	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535				138	0	0	93	29	23.7705
PARD3B	0	genome.wustl.edu	37	2	206166298	206166298	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	206166298	206166298	A	-	DEL	PARD3B	ENST00000406610	human	ensembl	74_37	+1	known	frame_shift_del	c.2503	p.T837fs	0.996	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3B	HGNC	ENSG00000116117				85	0	0	35	18	33.9623
ZDBF2	0	genome.wustl.edu	37	2	207174428	207174428	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	207174428	207174428	A	-	DEL	ZDBF2	ENST00000374423	human	ensembl	74_37	+1	known	frame_shift_del	c.5176	p.K1728fs	0.000	NULL	pfam_Znf_DBF,smart_Znf_DBF	-	no_errors	ZDBF2	HGNC	ENSG00000204186				48	0	0	42	15	26.3158
ERBB4	0	genome.wustl.edu	37	2	212248737	212248737	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	212248737	212248737	T	-	DEL	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	frame_shift_del	c.3530	p.N1177fs	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568				121	0	0	74	24	24.4898
TNS1	0	genome.wustl.edu	37	2	218712887	218712889	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	218712887	218712889	GCT	-	DEL	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	in_frame_del	c.1978_1976	p.Q659in_frame_del	1.000:1.000:0.994	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				30	0	0	40	20	33.3333
SPEG	0	genome.wustl.edu	37	2	220348798	220348798	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	220348798	220348798	C	-	DEL	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	frame_shift_del	c.6613	p.A2207fs	0.851	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195				74	0	0	59	21	26.25
SP140	0	genome.wustl.edu	37	2	231159025	231159025	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	231159025	231159025	A	-	DEL	SP140	ENST00000392045	human	ensembl	74_37	+1	known	frame_shift_del	c.2008	p.K672fs	0.001	NULL	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom,pfscan_Bromodomain	-	no_errors	SP140	HGNC	ENSG00000079263				47	0	0	21	12	36.3636
DNAJB3	0	genome.wustl.edu	37	2	234652187	234652188	+	RNA	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	234652187	234652188	-	C	INS	DNAJB3	ENST00000449667	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.050:0.014	-	-	-	no_errors	DNAJB3	HGNC	ENSG00000227802				63	0	0	50	12	19.3548
AGXT	0	genome.wustl.edu	37	2	241808307	241808308	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	241808307	241808308	-	C	INS	AGXT	ENST00000307503	human	ensembl	74_37	+1	known	frame_shift_ins	c.25_26	p.K12fs	0.000:0.001	superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	AGXT	HGNC	ENSG00000172482				32	0	0	33	8	19.5122
MTERFD2	0	genome.wustl.edu	37	2	242027865	242027866	+	RNA	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	242027865	242027866	-	G	INS	MTERFD2	ENST00000455202	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MTERFD2	HGNC	ENSG00000122085				56	0	0	56	18	24.3243
ING5	0	genome.wustl.edu	37	2	242650917	242650917	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	242650917	242650917	T	-	DEL	ING5	ENST00000445620	human	ensembl	74_37	+1	known	frame_shift_del	c.402	p.S137fs	0.000	NULL	NULL	-	no_errors	ING5	HGNC	ENSG00000168395				123	0	0	44	23	34.3284
TRAPPC12	0	genome.wustl.edu	37	2	3405588	3405588	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	3405588	3405588	A	-	DEL	TRAPPC12	ENST00000324266	human	ensembl	74_37	+1	known	frame_shift_del	c.1088	p.A365fs	1.000	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TRAPPC12	HGNC	ENSG00000171853				162	0	0	87	45	34.0909
RMDN2	0	genome.wustl.edu	37	2	38178783	38178783	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	38178783	38178783	T	-	DEL	RMDN2	ENST00000234195	human	ensembl	74_37	+1	known	frame_shift_del	c.425	p.F144fs	0.000	NULL	NULL	-	no_errors	RMDN2	HGNC	ENSG00000115841				78	0	0	52	18	25.7143
ZFP36L2	0	genome.wustl.edu	37	2	43452037	43452039	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	43452037	43452039	GGA	-	DEL	ZFP36L2	ENST00000282388	human	ensembl	74_37	-1	known	in_frame_del	c.906_904	p.S302in_frame_del	0.086:0.198:0.196	NULL	pfam_Tis11B_N,pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZFP36L2	HGNC	ENSG00000152518				18	0	0	30	11	26.8293
RHOQ	0	genome.wustl.edu	37	2	46808174	46808174	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	46808174	46808174	A	-	DEL	RHOQ	ENST00000238738	human	ensembl	74_37	+1	known	frame_shift_del	c.570	p.R193fs	1.000	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOQ	HGNC	ENSG00000119729				80	0	0	39	16	29.0909
SOX11	0	genome.wustl.edu	37	2	5833526	5833528	+	In_Frame_Del	DEL	GAC	GAC	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GAC	GAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	5833526	5833528	GAC	-	DEL	SOX11	ENST00000322002	human	ensembl	74_37	+1	known	in_frame_del	c.673_675	p.D228in_frame_del	1.000:1.000:0.999	pirsf_SOX-12/11/4a	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pirsf_SOX-12/11/4a,pfscan_HMG_box_dom	-	no_errors	SOX11	HGNC	ENSG00000176887				28	0	0	23	3	11.5385
ATP6V1B1	0	genome.wustl.edu	37	2	71191573	71191573	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	71191573	71191573	C	-	DEL	ATP6V1B1	ENST00000234396	human	ensembl	74_37	+1	known	frame_shift_del	c.1149	p.I386fs	0.999	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,superfamily_P-loop_NTPase,tigrfam_ATPase_V1-cplx_bsu	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,pfam_ATPase_F1/V1/A1-cplx_a/bsu_C,pfam_ATPase_F1_a/bsu_N,superfamily_P-loop_NTPase,superfamily_ATPase_F1_a/bsu_N,superfamily_ATPase_F1/V1/A1-cplx_a/bsu_C,tigrfam_ATPase_V1-cplx_bsu	-	no_errors	ATP6V1B1	HGNC	ENSG00000116039				116	0	0	78	15	16.129
TPRKB	0	genome.wustl.edu	37	2	73957881	73957881	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	73957881	73957881	A	-	DEL	TPRKB	ENST00000485758	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.004	-	-	-	no_errors	TPRKB	HGNC	ENSG00000144034				31	0	0	10	13	56.5217
WBP1	0	genome.wustl.edu	37	2	74687410	74687410	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	74687410	74687410	C	-	DEL	WBP1	ENST00000233615	human	ensembl	74_37	+1	known	frame_shift_del	c.412	p.P140fs	0.993	pfam_Uncharacterised_WW-bd	pfam_Uncharacterised_WW-bd	-	no_errors	WBP1	HGNC	ENSG00000239779				226	0	0	139	66	32.1951
FAHD2CP	0	genome.wustl.edu	37	2	96687157	96687157	+	RNA	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	96687157	96687157	C	-	DEL	FAHD2CP	ENST00000443258	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FAHD2CP	HGNC	ENSG00000231584				21	0	0	14	6	30
TAF1B	0	genome.wustl.edu	37	2	9989571	9989571	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	2	9989571	9989571	A	-	DEL	TAF1B	ENST00000263663	human	ensembl	74_37	+1	known	frame_shift_del	c.187	p.N66fs	0.991	NULL	pfam_TF_Rrn7	-	no_errors	TAF1B	HGNC	ENSG00000115750				15	0	0	6	3	33.3333
DSTN	0	genome.wustl.edu	37	20	17581680	17581680	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	17581680	17581680	T	-	DEL	DSTN	ENST00000246069	human	ensembl	74_37	+1	known	frame_shift_del	c.301	p.L103fs	1.000	pfam_Actin-bd_cofilin/tropomyosin,smart_Actin-bd_cofilin/tropomyosin,prints_ADF/Cofilin/Destrin	pfam_Actin-bd_cofilin/tropomyosin,smart_Actin-bd_cofilin/tropomyosin,prints_ADF/Cofilin/Destrin	-	no_errors	DSTN	HGNC	ENSG00000125868				74	0	0	51	16	23.8806
CD93	0	genome.wustl.edu	37	20	23066469	23066469	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	23066469	23066469	C	-	DEL	CD93	ENST00000246006	human	ensembl	74_37	-1	known	frame_shift_del	c.361	p.E121fs	0.689	pirsf_CD93/CD141,pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pirsf_CD93/CD141,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_MFS_dom_general_subst_transpt,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CD93	HGNC	ENSG00000125810				14	0	0	10	13	56.5217
PCED1A	0	genome.wustl.edu	37	20	2816204	2816204	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	2816204	2816204	C	-	DEL	PCED1A	ENST00000360652	human	ensembl	74_37	-1	known	frame_shift_del	c.1269	p.C425fs	0.001	NULL	NULL	-	no_errors	PCED1A	HGNC	ENSG00000132635				79	0	0	62	24	27.907
HM13	0	genome.wustl.edu	37	20	30142485	30142487	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	30142485	30142487	AAA	-	DEL	HM13	ENST00000474466	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.172:0.159:0.155	-	-	-	no_errors	HM13	HGNC	ENSG00000101294				20	0	0	19	11	36.6667
CHMP4B	0	genome.wustl.edu	37	20	32399335	32399336	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	32399335	32399336	-	C	INS	CHMP4B	ENST00000217402	human	ensembl	74_37	+1	known	frame_shift_ins	c.61_62	p.Q23fs	1.000:1.000	NULL	pfam_Snf7	-	no_errors	CHMP4B	HGNC	ENSG00000101421				20	0	0	14	8	36.3636
TSHZ2	0	genome.wustl.edu	37	20	51872444	51872445	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	51872444	51872445	-	C	INS	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	frame_shift_ins	c.2447_2448	p.M819fs	1.000:1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463				133	0	0	100	10	9.09091
ZNF217	0	genome.wustl.edu	37	20	52193226	52193226	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	52193226	52193226	C	-	DEL	ZNF217	ENST00000302342	human	ensembl	74_37	-1	known	frame_shift_del	c.2077	p.A693fs	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF217	HGNC	ENSG00000171940				179	0	0	110	24	17.9104
STX16-NPEPL1	0	genome.wustl.edu	37	20	57244434	57244436	+	In_Frame_Del	DEL	GTG	GTG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GTG	GTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	57244434	57244436	GTG	-	DEL	STX16-NPEPL1	ENST00000530122	human	ensembl	74_37	+1	known	in_frame_del	c.481_483	p.V162in_frame_del	1.000:1.000:1.000	pfam_Syntaxin_N,superfamily_t-SNARE	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX16-NPEPL1	HGNC	ENSG00000254995				34	0	0	36	8	18.1818
ZNF831	0	genome.wustl.edu	37	20	57766219	57766220	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	57766219	57766220	-	C	INS	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	frame_shift_ins	c.145_146	p.T52fs	0.658:0.643	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203				53	0	0	46	20	30.303
SYCP2	0	genome.wustl.edu	37	20	58467047	58467047	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	20	58467047	58467047	T	-	DEL	SYCP2	ENST00000357552	human	ensembl	74_37	-1	known	frame_shift_del	c.2362	p.M788fs	0.029	NULL	NULL	-	no_errors	SYCP2	HGNC	ENSG00000196074				43	0	0	18	13	41.9355
WRB	0	genome.wustl.edu	37	21	40768975	40768975	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	40768975	40768975	T	-	DEL	WRB	ENST00000466787	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WRB	HGNC	ENSG00000182093				16	0	0	7	4	36.3636
POFUT2	0	genome.wustl.edu	37	21	46705817	46705817	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	21	46705817	46705817	G	-	DEL	POFUT2	ENST00000349485	human	ensembl	74_37	-1	known	frame_shift_del	c.158	p.P53fs	0.992	pfam_GDP-Fuc_O-FucTrfase	pfam_GDP-Fuc_O-FucTrfase,superfamily_DUF749	-	no_errors	POFUT2	HGNC	ENSG00000186866				160	0	0	124	12	8.82353
TBX1	0	genome.wustl.edu	37	22	19754189	19754190	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	19754189	19754190	-	A	INS	TBX1	ENST00000332710	human	ensembl	74_37	+1	putative	frame_shift_ins	c.1287_1288	p.S430fs	1.000:1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX1	HGNC	ENSG00000184058				32	0	0	26	9	25.7143
SMARCB1	0	genome.wustl.edu	37	22	24134057	24134057	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	24134057	24134057	A	-	DEL	SMARCB1	ENST00000263121	human	ensembl	74_37	+1	known	frame_shift_del	c.208	p.T72fs	1.000	pirsf_SWI_SNF_chromatin_remodel_cplx	pfam_SNF5,pirsf_SWI_SNF_chromatin_remodel_cplx	-	no_errors	SMARCB1	HGNC	ENSG00000099956				122	0	0	67	23	25.5556
SFI1	0	genome.wustl.edu	37	22	31998270	31998271	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	31998270	31998271	AG	-	DEL	SFI1	ENST00000400288	human	ensembl	74_37	+1	known	frame_shift_del	c.1617_1618	p.R541fs	0.982:1.000	NULL	superfamily_Cyclin-like	-	no_errors	SFI1	HGNC	ENSG00000198089				142	0	0	55	21	27.6316
C22orf24	0	genome.wustl.edu	37	22	32334104	32334105	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	32334104	32334105	-	A	INS	C22orf24	ENST00000543051	human	ensembl	74_37	-1	known	frame_shift_ins	c.150_149	p.S51fs	0.001:0.000	NULL	NULL	-	no_errors	C22orf24	HGNC	ENSG00000128254				175	1	0.568182	99	23	18.8525
DDX17	0	genome.wustl.edu	37	22	38897211	38897211	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	38897211	38897211	T	-	DEL	DDX17	ENST00000396821	human	ensembl	74_37	-1	known	frame_shift_del	c.362	p.K121fs	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX17	HGNC	ENSG00000100201				63	0	0	24	10	29.4118
MKL1	0	genome.wustl.edu	37	22	40816542	40816542	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	40816542	40816542	G	-	DEL	MKL1	ENST00000355630	human	ensembl	74_37	-1	known	frame_shift_del	c.920	p.P307fs	0.025	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL1	HGNC	ENSG00000196588				149	0	0	128	10	7.24638
FAM109B	0	genome.wustl.edu	37	22	42473377	42473377	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	42473377	42473377	G	-	DEL	FAM109B	ENST00000321753	human	ensembl	74_37	+1	known	frame_shift_del	c.80	p.G29fs	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	FAM109B	HGNC	ENSG00000177096				139	0	0	104	42	28.7671
CPT1B	0	genome.wustl.edu	37	22	51014627	51014628	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	22	51014627	51014628	AT	-	DEL	CPT1B	ENST00000312108	human	ensembl	74_37	-1	known	frame_shift_del	c.699_698	p.Y233fs	1.000:1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1B	HGNC	ENSG00000205560				84	0	0	51	19	27.1429
TOMM70A	0	genome.wustl.edu	37	3	100119688	100119689	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	100119688	100119689	-	C	INS	TOMM70A	ENST00000284320	human	ensembl	74_37	-1	known	frame_shift_ins	c.106_105	p.L35fs	1.000:0.998	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TOMM70A	HGNC	ENSG00000154174				8	0	0	10	3	23.0769
PHLDB2	0	genome.wustl.edu	37	3	111664163	111664163	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	111664163	111664163	G	-	DEL	PHLDB2	ENST00000393925	human	ensembl	74_37	+1	known	frame_shift_del	c.2446	p.820fs	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB2	HGNC	ENSG00000144824				80	0	0	29	16	35.5556
ZBTB20	0	genome.wustl.edu	37	3	114058003	114058004	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	114058003	114058004	GG	-	DEL	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	frame_shift_del	c.2075_2074	p.P692fs	0.678:0.986	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				94	0	0	70	23	24.7312
GOLGB1	0	genome.wustl.edu	37	3	121409851	121409852	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	121409851	121409852	TC	-	DEL	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	frame_shift_del	c.8345_8344	p.D2782fs	0.003:0.001	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230				93	0	0	74	6	7.5
CNTN6	0	genome.wustl.edu	37	3	1414122	1414122	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	1414122	1414122	A	-	DEL	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	frame_shift_del	c.1632	p.G547fs	0.311	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115				81	0	0	37	14	27.451
GK5	0	genome.wustl.edu	37	3	141923491	141923492	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	141923491	141923492	-	A	INS	GK5	ENST00000487672	human	ensembl	74_37	-1	known	frame_shift_ins	c.457_456	p.L152fs	0.000:0.000	NULL	pfam_Carb_kinase_FGGY_N	-	no_errors	GK5	HGNC	ENSG00000175066				48	0	0	38	11	22.449
XRN1	0	genome.wustl.edu	37	3	142142409	142142409	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	142142409	142142409	T	-	DEL	XRN1	ENST00000264951	human	ensembl	74_37	-1	known	frame_shift_del	c.703	p.T235fs	0.869	pirsf_5_3_exoribonuclease_1	pfam_Put_53exo,pirsf_5_3_exoribonuclease_1	-	no_errors	XRN1	HGNC	ENSG00000114127				76	0	0	33	5	13.1579
NR2C2	0	genome.wustl.edu	37	3	15084406	15084406	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	15084406	15084406	T	-	DEL	NR2C2	ENST00000323373	human	ensembl	74_37	+1	known	frame_shift_del	c.1739	p.F582fs	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt	-	no_errors	NR2C2	HGNC	ENSG00000177463				64	0	0	42	16	27.5862
MED12L	0	genome.wustl.edu	37	3	151078324	151078324	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	151078324	151078324	T	-	DEL	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	frame_shift_del	c.2783	p.L929fs	1.000	NULL	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893				257	0	0	151	50	24.8756
IGSF10	0	genome.wustl.edu	37	3	151171553	151171553	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	151171553	151171553	T	-	DEL	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	frame_shift_del	c.334	p.M112fs	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580				100	0	0	63	25	28.4091
VEPH1	0	genome.wustl.edu	37	3	157081227	157081227	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	157081227	157081227	T	-	DEL	VEPH1	ENST00000362010	human	ensembl	74_37	-1	known	frame_shift_del	c.1661	p.N554fs	1.000	NULL	pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	VEPH1	HGNC	ENSG00000197415				193	1	0.515464	110	20	15.3846
NLGN1	0	genome.wustl.edu	37	3	173996895	173996895	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	173996895	173996895	C	-	DEL	NLGN1	ENST00000401917	human	ensembl	74_37	+1	known	frame_shift_del	c.1224	p.Q410fs	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN1	HGNC	ENSG00000169760				237	0	0	110	43	28.1046
MIR128-2	0	genome.wustl.edu	37	3	35786001	35786002	+	RNA	DEL	GA	GA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	35786001	35786002	GA	-	DEL	MIR128-2	ENST00000384893	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	MIR128-2	HGNC	ENSG00000207625				49	0	0	28	14	33.3333
PLXNB1	0	genome.wustl.edu	37	3	48455444	48455446	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	48455444	48455446	CCT	-	DEL	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	in_frame_del	c.4246_4244	p.E1415in_frame_del	1.000:1.000:1.000	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050				87	0	0	60	32	34.7826
COL7A1	0	genome.wustl.edu	37	3	48624754	48624754	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	48624754	48624754	G	-	DEL	COL7A1	ENST00000328333	human	ensembl	74_37	-1	known	frame_shift_del	c.3008	p.P1003fs	0.761	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270				18	0	0	15	10	40
RBM5	0	genome.wustl.edu	37	3	50144924	50144924	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	50144924	50144924	C	-	DEL	RBM5	ENST00000347869	human	ensembl	74_37	+1	known	frame_shift_del	c.963	p.L322fs	0.998	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM5	HGNC	ENSG00000003756				100	0	0	64	24	27.2727
DOCK3	0	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	51417604	51417604	C	-	DEL	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	frame_shift_del	c.5549	p.P1852fs	0.115	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538				86	0	0	29	28	49.1228
GNL3	0	genome.wustl.edu	37	3	52720836	52720836	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	52720836	52720836	A	-	DEL	GNL3	ENST00000418458	human	ensembl	74_37	+1	known	frame_shift_del	c.65	p.K24fs	1.000	pfam_Gnl3_N_dom	pfam_Gnl3_N_dom,pfam_GTP_binding_domain,superfamily_P-loop_NTPase	-	no_errors	GNL3	HGNC	ENSG00000163938				51	0	0	30	6	16.6667
HESX1	0	genome.wustl.edu	37	3	57232250	57232250	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	57232250	57232250	T	-	DEL	HESX1	ENST00000295934	human	ensembl	74_37	-1	known	frame_shift_del	c.533	p.N178fs	0.997	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HESX1	HGNC	ENSG00000163666				71	0	0	28	10	26.3158
RAD18	0	genome.wustl.edu	37	3	8944121	8944121	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	8944121	8944121	T	-	DEL	RAD18	ENST00000264926	human	ensembl	74_37	-1	known	frame_shift_del	c.1111	p.T371fs	0.000	NULL	pfam_SAP_dom,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_Rad18_put,smart_SAP_dom,pfscan_Znf_RING,pfscan_SAP_dom	-	no_errors	RAD18	HGNC	ENSG00000070950				58	0	0	34	13	27.6596
IL17RC	0	genome.wustl.edu	37	3	9958948	9958948	+	RNA	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	3	9958948	9958948	G	-	DEL	IL17RC	ENST00000498214	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IL17RC	HGNC	ENSG00000163702				13	0	0	23	4	14.8148
COL25A1	0	genome.wustl.edu	37	4	109767322	109767322	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	109767322	109767322	T	-	DEL	COL25A1	ENST00000399132	human	ensembl	74_37	-1	known	frame_shift_del	c.1488	p.G497fs	1.000	pfam_Collagen	pfam_Collagen	-	no_errors	COL25A1	HGNC	ENSG00000188517				167	0	0	60	24	28.5714
UGT8	0	genome.wustl.edu	37	4	115597234	115597234	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	115597234	115597234	T	-	DEL	UGT8	ENST00000310836	human	ensembl	74_37	+1	known	frame_shift_del	c.1416	p.L474fs	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT8	HGNC	ENSG00000174607				154	0	0	75	39	34.2105
QRFPR	0	genome.wustl.edu	37	4	122250740	122250740	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	122250740	122250740	T	-	DEL	QRFPR	ENST00000394427	human	ensembl	74_37	-1	known	frame_shift_del	c.1025	p.N342fs	1.000	pfam_7TM_GPCR_olfarory/Srsx,prints_NPY_rcpt,prints_NPFF_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NPFF_rcpt	-	no_errors	QRFPR	HGNC	ENSG00000186867				72	0	0	29	14	32.5581
ANKRD50	0	genome.wustl.edu	37	4	125590698	125590699	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	125590698	125590699	CT	-	DEL	ANKRD50	ENST00000504087	human	ensembl	74_37	-1	known	frame_shift_del	c.3734_3733	p.H1246fs	1.000:1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD50	HGNC	ENSG00000151458				309	0	0	180	74	29.1339
HHIP	0	genome.wustl.edu	37	4	145628239	145628239	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	145628239	145628239	A	-	DEL	HHIP	ENST00000296575	human	ensembl	74_37	+1	known	frame_shift_del	c.984	p.N330fs	0.982	superfamily_Quinoprot_gluc/sorb_DH	pfam_Folate_rcpt-like,superfamily_Quinoprot_gluc/sorb_DH,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HHIP	HGNC	ENSG00000164161				84	0	0	46	10	17.8571
BST1	0	genome.wustl.edu	37	4	15717330	15717330	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	15717330	15717330	T	-	DEL	BST1	ENST00000265016	human	ensembl	74_37	+1	known	frame_shift_del	c.612	p.F206fs	0.599	pfam_ADP-ribosyl_cyclase	pfam_ADP-ribosyl_cyclase	-	no_errors	BST1	HGNC	ENSG00000109743				39	0	0	30	14	31.8182
CLCN3	0	genome.wustl.edu	37	4	170618378	170618379	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	170618378	170618379	-	T	INS	CLCN3	ENST00000347613	human	ensembl	74_37	+1	known	frame_shift_ins	c.1056_1057	p.A354fs	0.981:1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-3	-	no_errors	CLCN3	HGNC	ENSG00000109572				106	0	0	53	25	32.0513
UFSP2	0	genome.wustl.edu	37	4	186336370	186336370	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	186336370	186336370	T	-	DEL	UFSP2	ENST00000264689	human	ensembl	74_37	-1	known	frame_shift_del	c.623	p.N208fs	0.013	NULL	pfam_Peptidase_C78_UfSP1/2	-	no_errors	UFSP2	HGNC	ENSG00000109775				88	0	0	42	20	32.2581
DHX15	0	genome.wustl.edu	37	4	24550501	24550502	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	24550501	24550502	-	T	INS	DHX15	ENST00000336812	human	ensembl	74_37	-1	known	frame_shift_ins	c.1225_1224	p.Q408fs	1.000:1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX15	HGNC	ENSG00000109606				63	0	0	44	11	20
ADD1	0	genome.wustl.edu	37	4	2930187	2930188	+	In_Frame_Ins	INS	-	-	AAG			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	2930187	2930188	-	AAG	INS	ADD1	ENST00000264758	human	ensembl	74_37	+1	known	in_frame_ins	c.2244_2245	p.752in_frame_insK	0.964:1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD1	HGNC	ENSG00000087274				212	0	0	166	65	28.1385
GRK4	0	genome.wustl.edu	37	4	3040280	3040282	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	3040280	3040282	AAA	-	DEL	GRK4	ENST00000504308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.003:0.005	-	-	-	no_errors	GRK4	HGNC	ENSG00000125388				50	0	0	19	10	34.4828
RGS12	0	genome.wustl.edu	37	4	3430399	3430399	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	3430399	3430399	A	-	DEL	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	frame_shift_del	c.3526	p.K1178fs	1.000	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788				89	0	0	40	18	31.0345
RGS12	0	genome.wustl.edu	37	4	3432430	3432431	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	3432430	3432431	-	C	INS	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	frame_shift_ins	c.3862_3863	p.G1291fs	0.000:0.000	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788				19	0	0	14	9	39.1304
KLF3	0	genome.wustl.edu	37	4	38691476	38691476	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	38691476	38691476	C	-	DEL	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	frame_shift_del	c.671	p.P226fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF3	HGNC	ENSG00000109787				199	0	0	152	36	19.1489
ENSG00000253917	0	genome.wustl.edu	37	4	3925797	3925797	+	Splice_Site	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	3925797	3925797	C	-	DEL	ENSG00000253917	ENST00000514073	human	ensembl	74_37	-1	known	splice_site_del	c.NULL	NULL	0.998	-	-	-	no_errors	AC226119.5	Clone_based_vega_gene	ENSG00000253917				23	0	0	11	5	31.25
PDS5A	0	genome.wustl.edu	37	4	39839728	39839729	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	39839728	39839729	-	T	INS	PDS5A	ENST00000303538	human	ensembl	74_37	-1	known	frame_shift_ins	c.3758_3757	p.T1253fs	0.998:0.643	NULL	superfamily_ARM-type_fold	-	no_errors	PDS5A	HGNC	ENSG00000121892				20	0	0	26	4	13.3333
LYAR	0	genome.wustl.edu	37	4	4285458	4285458	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	4285458	4285458	A	-	DEL	LYAR	ENST00000343470	human	ensembl	74_37	-1	known	frame_shift_del	c.12	p.F4fs	0.999	NULL	pfam_Znf_C2H2_LYAR	-	no_errors	LYAR	HGNC	ENSG00000145220				51	0	0	15	8	34.7826
STX18	0	genome.wustl.edu	37	4	4436579	4436580	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	4436579	4436580	-	T	INS	STX18	ENST00000306200	human	ensembl	74_37	-1	known	frame_shift_ins	c.620_619	p.I207fs	0.004:0.124	NULL	pfam_Syntaxin-18_N	-	no_errors	STX18	HGNC	ENSG00000168818				64	0	0	25	18	41.8605
GNPDA2	0	genome.wustl.edu	37	4	44719161	44719161	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	44719161	44719161	T	-	DEL	GNPDA2	ENST00000295448	human	ensembl	74_37	-1	known	frame_shift_del	c.378	p.E127fs	0.785	pfam_Glc/Gal-6P_isomerase,tigrfam_Glucosamine6P_isomerase	pfam_Glc/Gal-6P_isomerase,tigrfam_Glucosamine6P_isomerase	-	no_errors	GNPDA2	HGNC	ENSG00000163281				85	0	0	41	13	24.0741
ATP10D	0	genome.wustl.edu	37	4	47559697	47559698	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	47559697	47559698	-	G	INS	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	frame_shift_ins	c.1841_1842	p.L617fs	0.449:0.439	superfamily_HAD-like_dom	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246				59	0	0	35	12	25.5319
PIGG	0	genome.wustl.edu	37	4	515054	515055	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	515054	515055	-	T	INS	PIGG	ENST00000453061	human	ensembl	74_37	+1	known	frame_shift_ins	c.1324_1325	p.L443fs	0.967:0.961	NULL	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	PIGG	HGNC	ENSG00000174227				53	0	0	25	13	34.2105
S100P	0	genome.wustl.edu	37	4	6695772	6695774	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	6695772	6695774	AGA	-	DEL	S100P	ENST00000296370	human	ensembl	74_37	+1	known	in_frame_del	c.113_115	p.K39in_frame_del	0.995:0.995:0.994	pfam_S100_Ca-bd_sub	pfam_S100_Ca-bd_sub,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	S100P	HGNC	ENSG00000163993				45	0	0	39	7	15.2174
SLC4A4	0	genome.wustl.edu	37	4	72319254	72319255	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	72319254	72319255	-	T	INS	SLC4A4	ENST00000425175	human	ensembl	74_37	+1	known	frame_shift_ins	c.1365_1366	p.A457fs	0.987:1.000	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A4	HGNC	ENSG00000080493				234	0	0	134	51	27.5676
PCGF3	0	genome.wustl.edu	37	4	755175	755175	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	755175	755175	A	-	DEL	PCGF3	ENST00000362003	human	ensembl	74_37	+1	known	frame_shift_del	c.571	p.K192fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PCGF3	HGNC	ENSG00000185619				147	0	0	70	37	34.5794
AFAP1-AS1	0	genome.wustl.edu	37	4	7776705	7776706	+	RNA	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	7776705	7776706	-	A	INS	AFAP1-AS1	ENST00000608442	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.004	-	-	-	no_errors	AFAP1-AS1	HGNC	ENSG00000272620				33	0	0	26	5	16.129
FGF5	0	genome.wustl.edu	37	4	81196142	81196142	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	81196142	81196142	A	-	DEL	FGF5	ENST00000312465	human	ensembl	74_37	+1	known	frame_shift_del	c.435	p.G148fs	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF5	HGNC	ENSG00000138675				65	0	0	26	11	29.7297
PKD2	0	genome.wustl.edu	37	4	88986559	88986559	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	88986559	88986559	A	-	DEL	PKD2	ENST00000237596	human	ensembl	74_37	+1	known	frame_shift_del	c.2152	p.N720fs	1.000	NULL	pfam_PKD1_2_channel,pfam_Ion_trans_dom,pfscan_EF_hand_dom,prints_PKD_2,prints_PKD_1	-	no_errors	PKD2	HGNC	ENSG00000118762				146	1	0.680272	99	40	28.777
GRID2	0	genome.wustl.edu	37	4	93225753	93225754	+	RNA	DEL	AA	AA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	4	93225753	93225754	AA	-	DEL	GRID2	ENST00000505687	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	GRID2	HGNC	ENSG00000152208				20	0	0	17	7	29.1667
FBN2	0	genome.wustl.edu	37	5	127610310	127610311	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	127610310	127610311	-	C	INS	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	frame_shift_ins	c.7660_7659	p.F2553fs	0.998:0.012	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829				115	0	0	70	23	24.7312
RAD50	0	genome.wustl.edu	37	5	131931452	131931453	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	131931452	131931453	AA	-	DEL	RAD50	ENST00000265335	human	ensembl	74_37	+1	known	frame_shift_del	c.2157_2158	p.K722fs	0.997:1.000	superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	pfam_Rad50_Zn_hook,superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	-	no_errors	RAD50	HGNC	ENSG00000113522				88	0	0	71	22	23.6559
DNAH5	0	genome.wustl.edu	37	5	13751371	13751371	+	Splice_Site	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	13751371	13751371	T	-	DEL	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	splice_site_del	c.11029-2	e65-2	0.985	-	-	-	no_errors	DNAH5	HGNC	ENSG00000039139				32	0	0	16	8	33.3333
CDC25C	0	genome.wustl.edu	37	5	137627690	137627690	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	137627690	137627690	T	-	DEL	CDC25C	ENST00000323760	human	ensembl	74_37	-1	known	frame_shift_del	c.731	p.K244fs	0.395	pfam_MPI_Phosphatase	pfam_MPI_Phosphatase,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom,prints_MPI_Phosphatase	-	no_errors	CDC25C	HGNC	ENSG00000158402				110	1	0.900901	65	21	24.4186
TCERG1	0	genome.wustl.edu	37	5	145886723	145886723	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	145886723	145886723	A	-	DEL	TCERG1	ENST00000296702	human	ensembl	74_37	+1	known	frame_shift_del	c.2863	p.K957fs	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1	HGNC	ENSG00000113649				142	0	0	80	34	29.8246
LARP1	0	genome.wustl.edu	37	5	154173390	154173390	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	154173390	154173390	C	-	DEL	LARP1	ENST00000336314	human	ensembl	74_37	+1	known	frame_shift_del	c.668	p.T226fs	0.999	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,smart_DM15,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP1	HGNC	ENSG00000155506				272	0	0	292	83	22.1333
SLIT3	0	genome.wustl.edu	37	5	168175427	168175431	+	Frame_Shift_Del	DEL	CTCTC	CTCTC	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CTCTC	CTCTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	168175427	168175431	CTCTC	-	DEL	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	frame_shift_del	c.2150_2146	p.E716fs	1.000:1.000:1.000:1.000:1.000	NULL	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347				73	0	0	49	18	26.8657
PRKAA1	0	genome.wustl.edu	37	5	40775544	40775546	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	40775544	40775546	CTC	-	DEL	PRKAA1	ENST00000354209	human	ensembl	74_37	-1	known	in_frame_del	c.331_329	p.G110in_frame_del	1.000:1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PRKAA1	HGNC	ENSG00000132356				113	0	0	48	7	12.7273
MAP3K1	0	genome.wustl.edu	37	5	56177848	56177849	+	In_Frame_Ins	INS	-	-	CAA			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	56177848	56177849	-	CAA	INS	MAP3K1	ENST00000399503	human	ensembl	74_37	+1	novel	in_frame_ins	c.2821_2822	p.945in_frame_insT	0.964:0.958	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015				66	0	0	62	15	19.4805
ERCC8	0	genome.wustl.edu	37	5	60224781	60224781	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	60224781	60224781	A	-	DEL	ERCC8	ENST00000265038	human	ensembl	74_37	-1	known	frame_shift_del	c.83	p.L28fs	0.989	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	ERCC8	HGNC	ENSG00000049167				92	0	0	35	18	33.9623
KIF2A	0	genome.wustl.edu	37	5	61668339	61668341	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	61668339	61668341	CTT	-	DEL	KIF2A	ENST00000407818	human	ensembl	74_37	+1	known	in_frame_del	c.1721_1723	p.S575in_frame_del	1.000:1.000:1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2A	HGNC	ENSG00000068796				31	0	0	24	9	27.2727
ADAMTS6	0	genome.wustl.edu	37	5	64569200	64569200	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	5	64569200	64569200	C	-	DEL	ADAMTS6	ENST00000381055	human	ensembl	74_37	-1	known	frame_shift_del	c.1587	p.T530fs	1.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS6	HGNC	ENSG00000049192				277	0	0	150	57	27.5362
GRIK2	0	genome.wustl.edu	37	6	102503432	102503432	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	102503432	102503432	A	-	DEL	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	frame_shift_del	c.2539	p.N849fs	1.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418				169	0	0	78	31	28.4404
BEND3	0	genome.wustl.edu	37	6	107391602	107391602	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	107391602	107391602	C	-	DEL	BEND3	ENST00000369042	human	ensembl	74_37	-1	known	frame_shift_del	c.793	p.D265fs	1.000	pfam_BEN_domain	pfam_BEN_domain	-	no_errors	BEND3	HGNC	ENSG00000178409				61	0	0	61	5	7.57576
ROS1	0	genome.wustl.edu	37	6	117714409	117714409	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	117714409	117714409	T	-	DEL	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	frame_shift_del	c.1240	p.I414fs	0.959	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936				495	0	0	284	100	26.0417
SYNE1	0	genome.wustl.edu	37	6	152539539	152539540	+	Splice_Site	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	152539539	152539540	-	T	INS	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	splice_site_ins	c.22045-2_22045-1	e119-1	1.000:0.988	-	-	-	no_errors	SYNE1	HGNC	ENSG00000131018				219	0	0	184	39	17.4888
JARID2	0	genome.wustl.edu	37	6	15513219	15513220	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	15513219	15513220	-	A	INS	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	frame_shift_ins	c.3209_3210	p.E1073fs	1.000:0.269	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				191	0	0	151	60	28.436
ZDHHC14	0	genome.wustl.edu	37	6	158049476	158049477	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	158049476	158049477	AC	-	DEL	ZDHHC14	ENST00000359775	human	ensembl	74_37	+1	known	frame_shift_del	c.661_662	p.T221fs	1.000:1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC14	HGNC	ENSG00000175048				193	0	0	56	33	37.0787
LPAL2	0	genome.wustl.edu	37	6	160887595	160887595	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	160887595	160887595	T	-	DEL	LPAL2	ENST00000606083	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.621	-	-	-	no_errors	LPAL2	HGNC	ENSG00000213071				12	0	0	10	4	28.5714
QKI	0	genome.wustl.edu	37	6	163876309	163876310	+	Splice_Site	DEL	AG	AG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	163876309	163876310	AG	-	DEL	QKI	ENST00000361752	human	ensembl	74_37	+1	known	splice_site_del	c.143-2_143-1	e2-1	1.000:1.000	-	-	-	no_errors	QKI	HGNC	ENSG00000112531				59	0	0	19	14	42.4242
RBM24	0	genome.wustl.edu	37	6	17292449	17292449	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	17292449	17292449	A	-	DEL	RBM24	ENST00000508508	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.915	-	-	-	no_errors	RBM24	HGNC	ENSG00000112183				33	0	0	19	20	51.2821
HFE	0	genome.wustl.edu	37	6	26092988	26092989	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	26092988	26092989	-	C	INS	HFE	ENST00000357618	human	ensembl	74_37	+1	known	frame_shift_ins	c.692_693	p.Q233fs	0.997:0.998	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HFE	HGNC	ENSG00000010704				153	0	0	85	39	31.4516
SLC44A4	0	genome.wustl.edu	37	6	31832357	31832360	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	31832357	31832360	AAAA	-	DEL	SLC44A4	ENST00000487680	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.055:0.066:0.070:0.080	-	-	-	no_errors	SLC44A4	HGNC	ENSG00000204385				55	0	0	38	23	37.7049
TNXB	0	genome.wustl.edu	37	6	32020536	32020536	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	32020536	32020536	C	-	DEL	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	frame_shift_del	c.9020	p.G3007fs	0.041	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				74	0	0	43	30	41.0959
BRD2	0	genome.wustl.edu	37	6	32944465	32944468	+	Frame_Shift_Del	DEL	AGAG	AGAG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AGAG	AGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	32944465	32944468	AGAG	-	DEL	BRD2	ENST00000395289	human	ensembl	74_37	+1	known	frame_shift_del	c.952_955	p.E319fs	0.819:0.998:0.999:1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD2	HGNC	ENSG00000204256				162	0	0	113	31	21.5278
PHF1	0	genome.wustl.edu	37	6	33383808	33383830	+	Frame_Shift_Del	DEL	CTCGGAGAGTACGGCCTGATGGC	CTCGGAGAGTACGGCCTGATGGC	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CTCGGAGAGTACGGCCTGATGGC	CTCGGAGAGTACGGCCTGATGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	33383808	33383830	CTCGGAGAGTACGGCCTGATGGC	-	DEL	PHF1	ENST00000374516	human	ensembl	74_37	+1	known	frame_shift_del	c.1637_1659	p.A546fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.963:0.979:0.989:0.991:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF1	HGNC	ENSG00000112511				177	0	0	108	15	12.1951
UHRF1BP1	0	genome.wustl.edu	37	6	34826123	34826124	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	34826123	34826124	-	T	INS	UHRF1BP1	ENST00000192788	human	ensembl	74_37	+1	known	frame_shift_ins	c.1990_1991	p.L666fs	0.989:0.974	NULL	NULL	-	no_errors	UHRF1BP1	HGNC	ENSG00000065060				165	0	0	108	33	23.4043
RNF8	0	genome.wustl.edu	37	6	37328304	37328304	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	37328304	37328304	T	-	DEL	RNF8	ENST00000373479	human	ensembl	74_37	+1	known	frame_shift_del	c.194	p.L66fs	1.000	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pirsf_E3_Ub_ligase_RNF8,pfscan_FHA_dom	pfam_FHA_dom,pfam_Znf_C3HC4_RING-type,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_Znf_RING,pirsf_E3_Ub_ligase_RNF8,pfscan_FHA_dom,pfscan_Znf_RING	-	no_errors	RNF8	HGNC	ENSG00000112130				100	0	0	44	21	32.3077
CDC5L	0	genome.wustl.edu	37	6	44374080	44374081	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	44374080	44374081	-	A	INS	CDC5L	ENST00000371477	human	ensembl	74_37	+1	known	frame_shift_ins	c.779_780	p.D263fs	1.000:0.980	NULL	pfam_DUF3351,pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	CDC5L	HGNC	ENSG00000096401				59	0	0	26	13	33.3333
PHF3	0	genome.wustl.edu	37	6	64395813	64395814	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	64395813	64395814	GT	-	DEL	PHF3	ENST00000509330	human	ensembl	74_37	+1	putative	frame_shift_del	c.2190_2191	p.C733fs	1.000:1.000	NULL	NULL	-	no_errors	PHF3	HGNC	ENSG00000118482				100	0	0	59	11	15.7143
PHF3	0	genome.wustl.edu	37	6	64423004	64423005	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	64423004	64423005	-	C	INS	PHF3	ENST00000262043	human	ensembl	74_37	+1	known	frame_shift_ins	c.5520_5521	p.P1842fs	0.998:1.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	PHF3	HGNC	ENSG00000118482				213	0	0	146	54	27
RIMS1	0	genome.wustl.edu	37	6	72596775	72596775	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	72596775	72596775	C	-	DEL	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	frame_shift_del	c.49	p.M19fs	1.000	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841				55	0	0	35	8	18.6047
BCKDHB	0	genome.wustl.edu	37	6	80878721	80878721	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	80878721	80878721	T	-	DEL	BCKDHB	ENST00000320393	human	ensembl	74_37	+1	known	frame_shift_del	c.607	p.F204fs	1.000	pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd	pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	BCKDHB	HGNC	ENSG00000083123				166	0	0	79	20	20.202
CASP8AP2	0	genome.wustl.edu	37	6	90576391	90576391	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	6	90576391	90576391	A	-	DEL	CASP8AP2	ENST00000237177	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CASP8AP2	HGNC	ENSG00000118412				19	0	0	18	6	25
GIGYF1	0	genome.wustl.edu	37	7	100280373	100280373	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	100280373	100280373	G	-	DEL	GIGYF1	ENST00000275732	human	ensembl	74_37	-1	known	frame_shift_del	c.2440	p.L814fs	0.985	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830				49	0	0	42	16	27.5862
CUX1	0	genome.wustl.edu	37	7	101839973	101839974	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	101839973	101839974	-	C	INS	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	frame_shift_ins	c.1315_1316	p.P442fs	1.000:1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923				151	0	0	90	28	23.7288
KMT2E	0	genome.wustl.edu	37	7	104746985	104746985	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	104746985	104746985	A	-	DEL	KMT2E	ENST00000257745	human	ensembl	74_37	+1	known	frame_shift_del	c.2613	p.K873fs	0.999	NULL	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	KMT2E	HGNC	ENSG00000005483				65	0	0	47	17	26.5625
NOBOX	0	genome.wustl.edu	37	7	144098495	144098496	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	144098495	144098496	-	G	INS	NOBOX	ENST00000467773	human	ensembl	74_37	-1	known	frame_shift_ins	c.488_487	p.R163fs	0.116:0.001	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	NOBOX	HGNC	ENSG00000106410				49	0	0	17	27	61.3636
ATG9B	0	genome.wustl.edu	37	7	150721484	150721484	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	150721484	150721484	C	-	DEL	ATG9B	ENST00000377974	human	ensembl	74_37	-1	known	frame_shift_del	c.27	p.R10fs	0.511	NULL	pfam_Autophagy-rel_prot_9	-	no_errors	ATG9B	HGNC	ENSG00000181652				12	0	0	5	7	58.3333
RBM33	0	genome.wustl.edu	37	7	155556608	155556609	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	155556608	155556609	-	G	INS	RBM33	ENST00000401878	human	ensembl	74_37	+1	known	frame_shift_ins	c.3082_3083	p.L1031fs	1.000:1.000	NULL	smart_RRM_dom	-	no_errors	RBM33	HGNC	ENSG00000184863				21	0	0	16	9	36
GLI3	0	genome.wustl.edu	37	7	42003913	42003913	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	42003913	42003913	T	-	DEL	GLI3	ENST00000479210	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GLI3	HGNC	ENSG00000106571				41	0	0	35	12	25.5319
SNHG15	0	genome.wustl.edu	37	7	45025181	45025181	+	RNA	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	45025181	45025181	G	-	DEL	SNHG15	ENST00000577700	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG15	HGNC	ENSG00000232956				26	0	0	30	6	16.6667
KIAA1324L	0	genome.wustl.edu	37	7	86542522	86542523	+	Splice_Site	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	86542522	86542523	-	A	INS	KIAA1324L	ENST00000450689	human	ensembl	74_37	-1	known	splice_site_ins	c.1732-3_1732-2	e14-2	1.000:0.997	-	-	-	no_errors	KIAA1324L	HGNC	ENSG00000164659				62	0	0	41	8	16.3265
CROT	0	genome.wustl.edu	37	7	86978480	86978480	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	86978480	86978480	A	-	DEL	CROT	ENST00000331536	human	ensembl	74_37	+1	known	frame_shift_del	c.96	p.K34fs	0.795	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CROT	HGNC	ENSG00000005469				65	0	0	29	8	21.6216
MTERF	0	genome.wustl.edu	37	7	91509449	91509449	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	91509449	91509449	A	-	DEL	MTERF	ENST00000481516	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MTERF	HGNC	ENSG00000127989				42	0	0	18	11	37.931
CASD1	0	genome.wustl.edu	37	7	94174999	94174999	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	94174999	94174999	A	-	DEL	CASD1	ENST00000297273	human	ensembl	74_37	+1	known	frame_shift_del	c.1619	p.A543fs	1.000	pfam_Cas1_AcylTrans_dom	pfam_Cas1_AcylTrans_dom,superfamily_Cyclin-like	-	no_errors	CASD1	HGNC	ENSG00000127995				49	0	0	10	6	37.5
ZKSCAN5	0	genome.wustl.edu	37	7	99103706	99103706	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	99103706	99103706	C	-	DEL	ZKSCAN5	ENST00000326775	human	ensembl	74_37	+1	known	frame_shift_del	c.39	p.P15fs	0.980	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN5	HGNC	ENSG00000196652				188	0	0	106	39	26.8966
C7orf43	0	genome.wustl.edu	37	7	99754484	99754484	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	99754484	99754484	G	-	DEL	C7orf43	ENST00000316937	human	ensembl	74_37	-1	known	frame_shift_del	c.977	p.P326fs	1.000	NULL	NULL	-	no_errors	C7orf43	HGNC	ENSG00000146826				180	0	0	95	36	27.4809
GPC2	0	genome.wustl.edu	37	7	99769525	99769525	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	7	99769525	99769525	G	-	DEL	GPC2	ENST00000292377	human	ensembl	74_37	-1	known	frame_shift_del	c.1047	p.D350fs	0.020	pfam_Glypican	pfam_Glypican	-	no_errors	GPC2	HGNC	ENSG00000213420				11	0	0	6	3	33.3333
RNF19A	0	genome.wustl.edu	37	8	101300216	101300216	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	101300216	101300216	T	-	DEL	RNF19A	ENST00000341084	human	ensembl	74_37	-1	known	frame_shift_del	c.187	p.R63fs	1.000	NULL	pfam_Znf_C6HC,smart_Znf_RING,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	RNF19A	HGNC	ENSG00000034677				85	0	0	88	23	20.7207
SNX31	0	genome.wustl.edu	37	8	101586120	101586120	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	101586120	101586120	A	-	DEL	SNX31	ENST00000311812	human	ensembl	74_37	-1	known	frame_shift_del	c.1296	p.F432fs	0.782	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX31	HGNC	ENSG00000174226				96	0	0	65	8	10.9589
UBR5	0	genome.wustl.edu	37	8	103289349	103289349	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	103289349	103289349	T	-	DEL	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	frame_shift_del	c.6360	p.E2121fs	0.987	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517				128	0	0	106	27	20.3008
DCAF13	0	genome.wustl.edu	37	8	104439487	104439487	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	104439487	104439487	T	-	DEL	DCAF13	ENST00000519682	human	ensembl	74_37	+1	putative	frame_shift_del	c.619	p.F209fs	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF13	HGNC	ENSG00000164934				40	0	0	26	10	27.7778
PTK2	0	genome.wustl.edu	37	8	141754887	141754888	+	RNA	DEL	AG	AG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	141754887	141754888	AG	-	DEL	PTK2	ENST00000518509	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	PTK2	HGNC	ENSG00000169398				29	0	0	25	4	13.7931
PTK2	0	genome.wustl.edu	37	8	141754889	141754890	+	RNA	DEL	AA	AA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	141754889	141754890	AA	-	DEL	PTK2	ENST00000518509	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.004	-	-	-	no_errors	PTK2	HGNC	ENSG00000169398				24	0	0	22	7	24.1379
JRK	0	genome.wustl.edu	37	8	143746196	143746198	+	RNA	DEL	AGG	AGG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	143746196	143746198	AGG	-	DEL	JRK	ENST00000422119	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.001	-	-	-	no_errors	JRK	HGNC	ENSG00000234616				8	0	0	10	4	28.5714
ENSG00000204791	0	genome.wustl.edu	37	8	145106384	145106384	+	RNA	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	145106384	145106384	G	-	DEL	ENSG00000204791	ENST00000528912	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTD-3065J16.6	Clone_based_vega_gene	ENSG00000204791				25	0	0	27	13	32.5
CYC1	0	genome.wustl.edu	37	8	145150876	145150876	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	145150876	145150876	C	-	DEL	CYC1	ENST00000318911	human	ensembl	74_37	+1	known	frame_shift_del	c.270	p.S93fs	1.000	superfamily_Cyt_c-like_dom	pfam_Cyt_c1,superfamily_Cyt_c-like_dom,superfamily_Cyt_c1_TM_anchor_C,prints_Cyt_c1	-	no_errors	CYC1	HGNC	ENSG00000179091				115	0	0	132	25	15.9236
ENTPD4	0	genome.wustl.edu	37	8	23292045	23292046	+	RNA	DEL	CA	CA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	23292045	23292046	CA	-	DEL	ENTPD4	ENST00000522913	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ENTPD4	HGNC	ENSG00000197217				42	0	0	37	15	28.8462
ESCO2	0	genome.wustl.edu	37	8	27634576	27634577	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	27634576	27634577	-	A	INS	ESCO2	ENST00000305188	human	ensembl	74_37	+1	known	frame_shift_ins	c.751_752	p.T254fs	0.002:0.002	NULL	NULL	-	no_errors	ESCO2	HGNC	ENSG00000171320				62	0	0	93	18	16.2162
RB1CC1	0	genome.wustl.edu	37	8	53573204	53573205	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	53573204	53573205	-	A	INS	RB1CC1	ENST00000025008	human	ensembl	74_37	-1	known	frame_shift_ins	c.1641_1640	p.L547fs	1.000:1.000	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287				83	0	0	61	13	17.5676
MCMDC2	0	genome.wustl.edu	37	8	67786699	67786699	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	67786699	67786699	A	-	DEL	MCMDC2	ENST00000415737	human	ensembl	74_37	+1	known	frame_shift_del	c.179	p.K62fs	0.836	NULL	NULL	-	no_errors	MCMDC2	HGNC	ENSG00000178460				52	0	0	48	19	28.3582
ZFHX4	0	genome.wustl.edu	37	8	77767090	77767090	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	77767090	77767090	A	-	DEL	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	frame_shift_del	c.7933	p.R2647fs	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				88	0	0	81	21	20.5882
NBN	0	genome.wustl.edu	37	8	90967512	90967512	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	90967512	90967512	T	-	DEL	NBN	ENST00000265433	human	ensembl	74_37	-1	known	frame_shift_del	c.1396	p.R466fs	1.000	pirsf_Nibrin_met	pfam_DNA-repair_Nbs1_C,pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_BRCT_dom,smart_FHA_dom,pirsf_Nibrin_met,pfscan_FHA_dom	-	no_errors	NBN	HGNC	ENSG00000104320				129	0	0	74	21	22.1053
SLC26A7	0	genome.wustl.edu	37	8	92352747	92352747	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	92352747	92352747	A	-	DEL	SLC26A7	ENST00000309536	human	ensembl	74_37	+1	known	frame_shift_del	c.994	p.K333fs	1.000	pfam_Sulph_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	-	no_errors	SLC26A7	HGNC	ENSG00000147606				118	0	0	73	29	28.4314
ESRP1	0	genome.wustl.edu	37	8	95686611	95686611	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	95686611	95686611	A	-	DEL	ESRP1	ENST00000433389	human	ensembl	74_37	+1	known	frame_shift_del	c.1528	p.N512fs	1.000	smart_RRM_dom	superfamily_RNaseH-like_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ESRP1	HGNC	ENSG00000104413				114	0	0	52	55	51.4019
TSPYL5	0	genome.wustl.edu	37	8	98289664	98289664	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	8	98289664	98289664	G	-	DEL	TSPYL5	ENST00000322128	human	ensembl	74_37	-1	known	frame_shift_del	c.409	p.R137fs	0.768	NULL	pfam_NAP_family	-	no_errors	TSPYL5	HGNC	ENSG00000180543				66	0	0	89	16	15.2381
ZFP37	0	genome.wustl.edu	37	9	115806416	115806416	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	115806416	115806416	T	-	DEL	ZFP37	ENST00000553380	human	ensembl	74_37	-1	known	frame_shift_del	c.527	p.N176fs	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP37	HGNC	ENSG00000136866				86	0	0	52	20	27.7778
CNTRL	0	genome.wustl.edu	37	9	123924525	123924525	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	123924525	123924525	A	-	DEL	CNTRL	ENST00000238341	human	ensembl	74_37	+1	known	frame_shift_del	c.5399	p.K1802fs	1.000	superfamily_tRNA-bd_arm	pfam_Leu-rich_rpt,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	CNTRL	HGNC	ENSG00000119397				75	0	0	44	17	27.8689
NEK6	0	genome.wustl.edu	37	9	127110068	127110068	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	127110068	127110068	C	-	DEL	NEK6	ENST00000373600	human	ensembl	74_37	+1	known	frame_shift_del	c.900	p.P302fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK6	HGNC	ENSG00000119408				215	0	0	177	60	25.3165
SLC27A4	0	genome.wustl.edu	37	9	131112647	131112649	+	In_Frame_Del	DEL	GTG	GTG	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	GTG	GTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	131112647	131112649	GTG	-	DEL	SLC27A4	ENST00000300456	human	ensembl	74_37	+1	known	in_frame_del	c.772_774	p.V259in_frame_del	1.000:1.000:0.967	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A4	HGNC	ENSG00000167114				291	0	0	154	47	23.3831
C9orf114	0	genome.wustl.edu	37	9	131591120	131591120	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	131591120	131591120	T	-	DEL	C9orf114	ENST00000361256	human	ensembl	74_37	-1	known	frame_shift_del	c.102	p.K34fs	0.998	NULL	pfam_Put_MeTrfase,superfamily_NA-bd_OB-fold	-	no_errors	C9orf114	HGNC	ENSG00000198917				200	0	0	120	60	33.3333
AK8	0	genome.wustl.edu	37	9	135753607	135753607	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	135753607	135753607	G	-	DEL	AK8	ENST00000298545	human	ensembl	74_37	-1	known	frame_shift_del	c.36	p.E13fs	0.965	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	pfam_Adenylate_kin,superfamily_P-loop_NTPase,superfamily_Adenylate_kinase_lid-dom,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,prints_Adenylate_kin	-	no_errors	AK8	HGNC	ENSG00000165695				48	0	0	46	10	17.8571
SEC16A	0	genome.wustl.edu	37	9	139336155	139336155	+	RNA	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	139336155	139336155	G	-	DEL	SEC16A	ENST00000467838	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SEC16A	HGNC	ENSG00000148396				21	0	0	26	9	25.7143
NOTCH1	0	genome.wustl.edu	37	9	139410074	139410074	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	139410074	139410074	G	-	DEL	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	frame_shift_del	c.1764	p.C589fs	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400				9	0	0	16	5	23.8095
LCN8	0	genome.wustl.edu	37	9	139649798	139649798	+	RNA	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	139649798	139649798	G	-	DEL	LCN8	ENST00000480597	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LCN8	HGNC	ENSG00000204001				38	0	0	56	16	22.2222
NPDC1	0	genome.wustl.edu	37	9	139934526	139934526	+	RNA	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	139934526	139934526	G	-	DEL	NPDC1	ENST00000472668	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	NPDC1	HGNC	ENSG00000107281				29	0	0	26	12	31.5789
ZMYND19	0	genome.wustl.edu	37	9	140481542	140481542	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	140481542	140481542	C	-	DEL	ZMYND19	ENST00000298585	human	ensembl	74_37	-1	known	frame_shift_del	c.236	p.G79fs	0.986	NULL	pfam_Znf_MYND,pfscan_Znf_MYND	-	no_errors	ZMYND19	HGNC	ENSG00000165724				144	0	0	143	8	5.29801
FOCAD	0	genome.wustl.edu	37	9	20912931	20912931	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	20912931	20912931	A	-	DEL	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	frame_shift_del	c.2785	p.S931fs	1.000	superfamily_ARM-type_fold	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352				31	0	0	29	12	29.2683
SMARCA2	0	genome.wustl.edu	37	9	2181665	2181665	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	2181665	2181665	A	-	DEL	SMARCA2	ENST00000349721	human	ensembl	74_37	+1	known	frame_shift_del	c.4348	p.I1452fs	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,superfamily_RNaseH-like_dom,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	SMARCA2	HGNC	ENSG00000080503				51	0	0	15	15	50
TAF1L	0	genome.wustl.edu	37	9	32633024	32633025	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	32633024	32633025	-	T	INS	TAF1L	ENST00000242310	human	ensembl	74_37	-1	known	frame_shift_ins	c.2554_2553	p.A851fs	1.000:1.000	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1L	HGNC	ENSG00000122728				228	0	0	157	9	5.42169
DNAJA1	0	genome.wustl.edu	37	9	33034284	33034286	+	In_Frame_Del	DEL	TAT	TAT	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	TAT	TAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	33034284	33034286	TAT	-	DEL	DNAJA1	ENST00000330899	human	ensembl	74_37	+1	known	in_frame_del	c.714_716	p.I241in_frame_del	1.000:1.000:1.000	pfam_DnaJ_C,superfamily_HSP40/DnaJ_pept-bd	pfam_DnaJ_C,pfam_DnaJ_domain,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_domain,pfscan_DnaJ_domain,pfscan_HSP_DnaJ_Cys-rich_dom,prints_DnaJ_domain	-	no_errors	DNAJA1	HGNC	ENSG00000086061				96	0	0	44	12	21.4286
C9orf131	0	genome.wustl.edu	37	9	35043650	35043650	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	35043650	35043650	C	-	DEL	C9orf131	ENST00000312292	human	ensembl	74_37	+1	known	frame_shift_del	c.1024	p.C344fs	0.000	NULL	NULL	-	no_errors	C9orf131	HGNC	ENSG00000174038				575	0	0	516	135	20.7373
TESK1	0	genome.wustl.edu	37	9	35607526	35607526	+	RNA	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	35607526	35607526	G	-	DEL	TESK1	ENST00000463897	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.031	-	-	-	no_errors	TESK1	HGNC	ENSG00000107140				120	0	0	72	63	46.6667
UHRF2	0	genome.wustl.edu	37	9	6499821	6499822	+	RNA	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	6499821	6499822	-	C	INS	UHRF2	ENST00000492853	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	UHRF2	HGNC	ENSG00000147854				36	0	0	40	8	16.6667
TJP2	0	genome.wustl.edu	37	9	71835953	71835953	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	71835953	71835953	G	-	DEL	TJP2	ENST00000539225	human	ensembl	74_37	+1	known	frame_shift_del	c.586	p.R198fs	0.997	NULL	pfam_PDZ,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like,prints_ZonOcculS2,prints_ZonOcculdens	-	no_errors	TJP2	HGNC	ENSG00000119139				15	0	0	17	14	45.1613
DAPK1	0	genome.wustl.edu	37	9	90321802	90321802	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	90321802	90321802	G	-	DEL	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	frame_shift_del	c.3891	p.Y1300fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730				124	0	0	80	33	29.2035
IARS	0	genome.wustl.edu	37	9	95003101	95003101	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	9	95003101	95003101	A	-	DEL	IARS	ENST00000473915	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	IARS	HGNC	ENSG00000196305				20	0	0	9	5	35.7143
RHOXF2	0	genome.wustl.edu	37	X	119293217	119293217	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	119293217	119293217	G	-	DEL	RHOXF2	ENST00000371388	human	ensembl	74_37	+1	known	frame_shift_del	c.376	p.L128fs	0.000	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	RHOXF2	HGNC	ENSG00000131721				45	0	0	43	10	18.8679
MOSPD1	0	genome.wustl.edu	37	X	134033048	134033048	+	RNA	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	134033048	134033048	T	-	DEL	MOSPD1	ENST00000462060	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MOSPD1	HGNC	ENSG00000101928				41	0	0	15	27	64.2857
DDX26B	0	genome.wustl.edu	37	X	134680317	134680317	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	134680317	134680317	T	-	DEL	DDX26B	ENST00000370752	human	ensembl	74_37	+1	known	frame_shift_del	c.352	p.L120fs	1.000	pfscan_VWF_A	pfscan_VWF_A	-	no_errors	DDX26B	HGNC	ENSG00000165359				36	0	0	7	13	65
FGF13	0	genome.wustl.edu	37	X	137939823	137939823	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	137939823	137939823	G	-	DEL	FGF13	ENST00000370603	human	ensembl	74_37	-1	known	frame_shift_del	c.68	p.P23fs	1.000	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam,prints_Fibroblast_GF_fam	-	no_errors	FGF13	HGNC	ENSG00000129682				30	0	0	10	14	58.3333
MAMLD1	0	genome.wustl.edu	37	X	149639324	149639325	+	In_Frame_Ins	INS	-	-	CAG			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	149639324	149639325	-	CAG	INS	MAMLD1	ENST00000432680	human	ensembl	74_37	+1	known	in_frame_ins	c.1404_1405	p.472in_frame_insQ	0.002:0.006	NULL	NULL	-	no_errors	MAMLD1	HGNC	ENSG00000013619				48	0	0	42	11	20.7547
F8	0	genome.wustl.edu	37	X	154157686	154157686	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	154157686	154157686	T	-	DEL	F8	ENST00000360256	human	ensembl	74_37	-1	known	frame_shift_del	c.4379	p.N1460fs	0.012	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010				88	0	0	53	7	11.6667
RPS6KA3	0	genome.wustl.edu	37	X	20173535	20173536	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	20173535	20173536	-	T	INS	RPS6KA3	ENST00000379565	human	ensembl	74_37	-1	known	frame_shift_ins	c.2204_2203	p.I735fs	1.000:1.000	superfamily_Kinase-like_dom,pirsf_Ribosomal_S6_kinase_II	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RPS6KA3	HGNC	ENSG00000177189				96	0	0	83	6	6.74157
MED14	0	genome.wustl.edu	37	X	40588606	40588607	+	RNA	DEL	AA	AA	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	40588606	40588607	AA	-	DEL	MED14	ENST00000463072	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MED14	HGNC	ENSG00000180182				25	0	0	11	6	35.2941
ZXDB	0	genome.wustl.edu	37	X	57620306	57620307	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	57620306	57620307	TC	-	DEL	ZXDB	ENST00000374888	human	ensembl	74_37	+1	known	frame_shift_del	c.1825_1826	p.F611fs	0.999:1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDB	HGNC	ENSG00000198455				87	0	0	69	13	15.8537
AMER1	0	genome.wustl.edu	37	X	63412123	63412124	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	63412123	63412124	-	C	INS	AMER1	ENST00000330258	human	ensembl	74_37	-1	known	frame_shift_ins	c.1044_1043	p.Q349fs	0.998:1.000	pfam_Uncharacterised_FAM123	pfam_Uncharacterised_FAM123	-	no_errors	AMER1	HGNC	ENSG00000184675				119	0	0	85	7	7.6087
ITGB1BP2	0	genome.wustl.edu	37	X	70521660	70521661	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	70521660	70521661	TC	-	DEL	ITGB1BP2	ENST00000373829	human	ensembl	74_37	+1	known	frame_shift_del	c.4_5	p.L3fs	1.000:1.000	pfam_CHORD	pfam_CHORD,pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom	-	no_errors	ITGB1BP2	HGNC	ENSG00000147166				54	0	0	25	29	53.7037
XIST	0	genome.wustl.edu	37	X	73071846	73071846	+	RNA	DEL	A	A	-			TCGA-HU-A4H8-01A-11D-A25D-08	TCGA-HU-A4H8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e6d3704-3182-409f-8aa5-b5956ec79a80	a926e4a4-f9e1-4732-a285-d82ea4c33f4d	X	73071846	73071846	A	-	DEL	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				8	0	0	7	14	66.6667