Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error default_gene_name gene_name_source ensembl_gene_id tier title header normal_ref_reads normal_var_reads normal_VAF tumor_ref_reads tumor_var_reads tumor_VAF ATAD3C 0 genome.wustl.edu 37 1 1403804 1403804 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 1 1403804 1403804 C T SNP ATAD3C ENST00000378785 human ensembl 74_37 +1 known missense c.1130 p.A377V 1.000 superfamily_P-loop_NTPase pfam_DUF3523,pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase - no_errors ATAD3C HGNC ENSG00000215915 41 0 0 16 12 42.8571 GPATCH4 0 genome.wustl.edu 37 1 156566248 156566248 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 1 156566248 156566248 C T SNP GPATCH4 ENST00000438976 human ensembl 74_37 -1 known missense c.371 p.G124E 0.787 NULL pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom - no_errors GPATCH4 HGNC ENSG00000160818 122 0 0 105 35 25 OR6K2 0 genome.wustl.edu 37 1 158670349 158670349 + Missense_Mutation SNP G G T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 1 158670349 158670349 G T SNP OR6K2 ENST00000359610 human ensembl 74_37 -1 known missense c.94 p.L32I 0.985 prints_GPCR_Rhodpsn pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn - no_errors OR6K2 HGNC ENSG00000196171 77 0 0 76 21 21.6495 MNDA 0 genome.wustl.edu 37 1 158819008 158819008 + Missense_Mutation SNP G G T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 1 158819008 158819008 G T SNP MNDA ENST00000368141 human ensembl 74_37 +1 known missense c.1205 p.G402V 0.000 NULL pfam_HIN200/IF120x,pfam_DAPIN,pfscan_DAPIN,pfscan_HIN200/IF120x - no_errors MNDA HGNC ENSG00000163563 54 0 0 21 25 54.3478 PLEKHM2 0 genome.wustl.edu 37 1 16042763 16042763 + Missense_Mutation SNP A A G TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 1 16042763 16042763 A G SNP PLEKHM2 ENST00000375799 human ensembl 74_37 +1 known missense c.92 p.E31G 1.000 NULL pfam_Run,pfam_Pleckstrin_homology,smart_Run,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Run - no_errors PLEKHM2 HGNC ENSG00000116786 13 0 0 11 2 15.3846 FCGR3B 0 genome.wustl.edu 37 1 161599690 161599690 + Missense_Mutation SNP A A T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 1 161599690 161599690 A T SNP FCGR3B ENST00000294800 human ensembl 74_37 -1 known missense c.197 p.L66H 0.001 smart_Ig_sub,pfscan_Ig-like_dom smart_Ig_sub,pfscan_Ig-like_dom - no_errors FCGR3B HGNC ENSG00000162747 113 0 0 66 23 25.8427 CLCNKB 0 genome.wustl.edu 37 1 16374443 16374443 + Silent SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 1 16374443 16374443 C T SNP CLCNKB ENST00000375679 human ensembl 74_37 +1 known silent c.402 p.V134 0.606 pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-K - no_errors CLCNKB HGNC ENSG00000184908 103 0 0 40 41 50.6173 EPHA8 0 genome.wustl.edu 37 1 22913046 22913046 + Silent SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 1 22913046 22913046 C T SNP EPHA8 ENST00000166244 human ensembl 74_37 +1 known silent c.897 p.S299 0.411 pirsf_Tyr_kinase_ephrin_rcpt,superfamily_Growth_fac_rcpt_N_dom pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom - no_errors EPHA8 HGNC ENSG00000070886 74 0 0 29 23 44.2308 ZMYND12 0 genome.wustl.edu 37 1 42921644 42921644 + Missense_Mutation SNP C C G TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 1 42921644 42921644 C G SNP ZMYND12 ENST00000372565 human ensembl 74_37 -1 known missense c.25 p.V9L 1.000 NULL pfam_Znf_MYND,pfscan_Znf_MYND - no_errors ZMYND12 HGNC ENSG00000066185 30 0 0 17 9 34.6154 CHD5 0 genome.wustl.edu 37 1 6184073 6184073 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 1 6184073 6184073 G A SNP CHD5 ENST00000262450 human ensembl 74_37 -1 known missense c.4634 p.S1545L 0.999 NULL pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow - no_errors CHD5 HGNC ENSG00000116254 29 0 0 8 4 33.3333 ZNF438 0 genome.wustl.edu 37 10 31134426 31134426 + Missense_Mutation SNP G G C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 10 31134426 31134426 G C SNP ZNF438 ENST00000361310 human ensembl 74_37 -1 known missense c.1951 p.R651G 1.000 smart_Znf_C2H2-like smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF438 HGNC ENSG00000183621 69 0 0 85 14 14.1414 ACTA2 0 genome.wustl.edu 37 10 90699289 90699289 + Silent SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 10 90699289 90699289 C T SNP ACTA2 ENST00000224784 human ensembl 74_37 -1 known silent c.783 p.E261 1.000 pfam_Actin-related,smart_Actin-related pfam_Actin-related,smart_Actin-related,prints_Actin-related - no_errors ACTA2 HGNC ENSG00000107796 123 0 0 99 32 24.4275 CCDC84 0 genome.wustl.edu 37 11 118886110 118886110 + Missense_Mutation SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 11 118886110 118886110 T C SNP CCDC84 ENST00000334418 human ensembl 74_37 +1 known missense c.899 p.F300S 1.000 NULL NULL - no_errors CCDC84 HGNC ENSG00000186166 30 0 0 35 8 18.6047 NTM 0 genome.wustl.edu 37 11 131781508 131781508 + Missense_Mutation SNP G G C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 11 131781508 131781508 G C SNP NTM ENST00000539799 human ensembl 74_37 +1 known missense c.133 p.V45L 1.000 pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom - no_errors NTM HGNC ENSG00000182667 132 0 0 93 59 38.8158 KCNJ11 0 genome.wustl.edu 37 11 17409232 17409232 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 11 17409232 17409232 C T SNP KCNJ11 ENST00000339994 human ensembl 74_37 -1 known missense c.407 p.R136H 1.000 pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir6.2 - no_errors KCNJ11 HGNC ENSG00000187486 51 0 0 14 8 36.3636 DGKZ 0 genome.wustl.edu 37 11 46400600 46400600 + Silent SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 11 46400600 46400600 G A SNP DGKZ ENST00000454345 human ensembl 74_37 +1 known silent c.3042 p.T1014 0.034 superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom - no_errors DGKZ HGNC ENSG00000149091 24 0 0 1 15 93.75 ARFGAP2 0 genome.wustl.edu 37 11 47188381 47188381 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 11 47188381 47188381 G A SNP ARFGAP2 ENST00000524782 human ensembl 74_37 -1 known missense c.1262 p.A421V 1.000 NULL pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP - no_errors ARFGAP2 HGNC ENSG00000149182 251 0 0 18 145 88.9571 MADD 0 genome.wustl.edu 37 11 47296188 47296188 + Missense_Mutation SNP T T G TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 11 47296188 47296188 T G SNP MADD ENST00000311027 human ensembl 74_37 +1 known missense c.137 p.F46C 1.000 pfam_uDENN_dom,smart_uDENN_dom,pfscan_uDENN_dom pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom - no_errors MADD HGNC ENSG00000110514 263 0 0 105 71 40.3409 TRIM48 0 genome.wustl.edu 37 11 55035844 55035844 + Missense_Mutation SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 11 55035844 55035844 T C SNP TRIM48 ENST00000417545 human ensembl 74_37 +1 known missense c.574 p.Y192H 0.183 NULL pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING - no_errors TRIM48 HGNC ENSG00000150244 71 0 0 94 8 7.84314 SYVN1 0 genome.wustl.edu 37 11 64897313 64897313 + Missense_Mutation SNP G G T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 11 64897313 64897313 G T SNP SYVN1 ENST00000377190 human ensembl 74_37 -1 known missense c.1483 p.H495N 1.000 NULL pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING - no_errors SYVN1 HGNC ENSG00000162298 53 0 0 31 32 50.7937 NLRP10 0 genome.wustl.edu 37 11 7981973 7981973 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 11 7981973 7981973 C T SNP NLRP10 ENST00000328600 human ensembl 74_37 -1 known missense c.1186 p.D396N 0.000 NULL pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,pfscan_NACHT_NTPase,pfscan_DAPIN - no_errors NLRP10 HGNC ENSG00000182261 39 0 0 21 14 40 FAT3 0 genome.wustl.edu 37 11 92577863 92577863 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 11 92577863 92577863 C T SNP FAT3 ENST00000298047 human ensembl 74_37 +1 known missense c.11330 p.P3777L 1.000 NULL pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin - no_errors FAT3 HGNC ENSG00000165323 10 0 0 10 5 33.3333 CHST11 0 genome.wustl.edu 37 12 105150997 105150997 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 12 105150997 105150997 G A SNP CHST11 ENST00000303694 human ensembl 74_37 +1 known missense c.475 p.A159T 0.968 pfam_Sulfotransferase pfam_Sulfotransferase - no_errors CHST11 HGNC ENSG00000171310 58 0 0 6 26 81.25 CLIP1 0 genome.wustl.edu 37 12 122757592 122757592 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 12 122757592 122757592 C T SNP CLIP1 ENST00000540338 human ensembl 74_37 -1 known missense c.4147 p.D1383N 1.000 NULL pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Znf_CCHC,superfamily_Prefoldin,pfscan_CAP-Gly_domain - no_errors CLIP1 HGNC ENSG00000130779 62 0 0 29 23 44.2308 HOXC12 0 genome.wustl.edu 37 12 54348852 54348852 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 12 54348852 54348852 C T SNP HOXC12 ENST00000243103 human ensembl 74_37 +1 known missense c.139 p.R47C 1.000 NULL pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa - no_errors HOXC12 HGNC ENSG00000123407 21 0 0 1 6 85.7143 A2ML1 0 genome.wustl.edu 37 12 9001452 9001452 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 12 9001452 9001452 G A SNP A2ML1 ENST00000299698 human ensembl 74_37 +1 known missense c.1970 p.R657H 0.000 NULL pfam_A2M_comp,pfam_Macroglobln_a2,pfam_A2M_N_2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd - no_errors A2ML1 HGNC ENSG00000166535 260 0 0 16 79 83.1579 OR4N2 0 genome.wustl.edu 37 14 20296316 20296316 + Missense_Mutation SNP A A T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 14 20296316 20296316 A T SNP OR4N2 ENST00000315947 human ensembl 74_37 +1 known missense c.709 p.M237L 0.000 pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn - no_errors OR4N2 HGNC ENSG00000176294 201 0 0 142 23 13.9394 OR4K13 0 genome.wustl.edu 37 14 20502652 20502652 + Missense_Mutation SNP C C A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 14 20502652 20502652 C A SNP OR4K13 ENST00000315693 human ensembl 74_37 -1 known missense c.266 p.R89L 0.000 pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn - no_errors OR4K13 HGNC ENSG00000176253 64 0 0 24 10 29.4118 NIN 0 genome.wustl.edu 37 14 51243828 51243828 + Missense_Mutation SNP A A C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 14 51243828 51243828 A C SNP NIN ENST00000245441 human ensembl 74_37 -1 known missense c.505 p.L169V 0.855 NULL superfamily_tRNA-bd_arm,pfscan_EF_hand_dom - no_errors NIN HGNC ENSG00000100503 83 0 0 43 28 39.4366 C14orf37 0 genome.wustl.edu 37 14 58605379 58605379 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 14 58605379 58605379 G A SNP C14orf37 ENST00000267485 human ensembl 74_37 -1 known missense c.698 p.T233I 0.000 NULL NULL - no_errors C14orf37 HGNC ENSG00000139971 78 0 0 35 29 45.3125 PLEKHG3 0 genome.wustl.edu 37 14 65207762 65207762 + Silent SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 14 65207762 65207762 G A SNP PLEKHG3 ENST00000394691 human ensembl 74_37 +1 known silent c.1527 p.P509 0.940 NULL pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain - no_errors PLEKHG3 HGNC ENSG00000126822 50 0 0 17 9 34.6154 GALNT16 0 genome.wustl.edu 37 14 69805397 69805397 + Missense_Mutation SNP G G T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 14 69805397 69805397 G T SNP GALNT16 ENST00000337827 human ensembl 74_37 +1 known missense c.997 p.G333C 1.000 NULL pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin - no_errors GALNT16 HGNC ENSG00000100626 107 0 0 62 22 26.1905 DPF3 0 genome.wustl.edu 37 14 73137899 73137899 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 14 73137899 73137899 C T SNP DPF3 ENST00000366353 human ensembl 74_37 -1 known missense c.1184 p.R395Q 1.000 NULL smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors DPF3 HGNC ENSG00000205683 30 0 0 15 10 40 APBA2 0 genome.wustl.edu 37 15 29346255 29346255 + Silent SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 15 29346255 29346255 C T SNP APBA2 ENST00000558259 human ensembl 74_37 +1 known silent c.168 p.P56 0.831 NULL pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom - no_errors APBA2 HGNC ENSG00000034053 73 0 0 5 44 89.7959 ARHGAP11B 0 genome.wustl.edu 37 15 30938483 30938483 + RNA SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 15 30938483 30938483 T C SNP ARHGAP11B ENST00000566548 human ensembl 74_37 +1 known rna NULL NULL 0.713 - - - no_errors ARHGAP11B HGNC ENSG00000187951 18 0 0 11 6 35.2941 SLC12A1 0 genome.wustl.edu 37 15 48539658 48539658 + Splice_Site SNP G G T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 15 48539658 48539658 G T SNP SLC12A1 ENST00000380993 human ensembl 74_37 +1 known splice_site c.1684+1 e12+1 1.000 - - - no_errors SLC12A1 HGNC ENSG00000074803 9 0 0 11 6 35.2941 DMXL2 0 genome.wustl.edu 37 15 51749571 51749571 + Missense_Mutation SNP G G C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 15 51749571 51749571 G C SNP DMXL2 ENST00000543779 human ensembl 74_37 -1 known missense c.8228 p.S2743C 1.000 NULL pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors DMXL2 HGNC ENSG00000104093 105 0 0 110 59 34.9112 ACAN 0 genome.wustl.edu 37 15 89391173 89391173 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 15 89391173 89391173 G A SNP ACAN ENST00000439576 human ensembl 74_37 +1 known missense c.1636 p.V546M 0.999 pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link - no_errors ACAN HGNC ENSG00000157766 66 0 0 34 62 64.5833 ACSM2B 0 genome.wustl.edu 37 16 20554485 20554485 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 16 20554485 20554485 G A SNP ACSM2B ENST00000329697 human ensembl 74_37 -1 known missense c.1381 p.R461W 0.206 pfam_AMP-dep_Synth/Lig pfam_AMP-dep_Synth/Lig - no_errors ACSM2B HGNC ENSG00000066813 433 2 0.45977 238 136 36.3636 IL21R 0 genome.wustl.edu 37 16 27460309 27460309 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 16 27460309 27460309 C T SNP IL21R ENST00000337929 human ensembl 74_37 +1 known missense c.1322 p.P441L 0.008 NULL superfamily_Fibronectin_type3 - no_errors IL21R HGNC ENSG00000103522 41 0 0 23 8 25.8065 SLC6A10P 0 genome.wustl.edu 37 16 32890534 32890534 + RNA SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 16 32890534 32890534 C T SNP SLC6A10P ENST00000330048 human ensembl 74_37 -1 known rna NULL NULL 1.000 - - - no_errors SLC6A10P HGNC ENSG00000214617 11 0 0 1 4 80 GOT2 0 genome.wustl.edu 37 16 58752443 58752443 + Silent SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 16 58752443 58752443 C T SNP GOT2 ENST00000245206 human ensembl 74_37 -1 known silent c.585 p.V195 0.522 pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,prints_Asp_trans - no_errors GOT2 HGNC ENSG00000125166 149 1 0.666667 52 33 38.8235 CDH8 0 genome.wustl.edu 37 16 61823293 61823293 + Silent SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 16 61823293 61823293 T C SNP CDH8 ENST00000577390 human ensembl 74_37 -1 known silent c.1371 p.E457 1.000 pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors CDH8 HGNC ENSG00000150394 92 0 0 50 29 36.7089 FOXN1 0 genome.wustl.edu 37 17 26851007 26851007 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 17 26851007 26851007 C T SNP FOXN1 ENST00000226247 human ensembl 74_37 +1 known missense c.20 p.P7L 0.142 NULL pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head - no_errors FOXN1 HGNC ENSG00000109101 56 0 0 50 11 18.0328 KRTAP4-11 0 genome.wustl.edu 37 17 39274132 39274132 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 17 39274132 39274132 G A SNP KRTAP4-11 ENST00000391413 human ensembl 74_37 -1 known missense c.436 p.R146C 0.006 NULL pfam_Keratin-assoc - no_errors KRTAP4-11 HGNC ENSG00000212721 29 0 0 52 6 10.3448 PTGES3L-AARSD1 0 genome.wustl.edu 37 17 41108328 41108328 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 17 41108328 41108328 G A SNP PTGES3L-AARSD1 ENST00000409399 human ensembl 74_37 -1 known missense c.1078 p.R360W 1.000 superfamily_Thr/Ala-tRNA-synth_IIc_edit,pfscan_Ala-tRNA-synth_IIc_core pfam_tRNA_SAD,pfam_CS_dom,pfam_Ala-tRNA-synth_IIc_N,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_HSP20-like_chaperone,smart_tRNA_SAD,pfscan_CS_dom,pfscan_Ala-tRNA-synth_IIc_core - no_errors PTGES3L-AARSD1 HGNC ENSG00000108825 92 0 0 95 18 15.9292 PITPNM3 0 genome.wustl.edu 37 17 6367188 6367188 + Missense_Mutation SNP A A G TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 17 6367188 6367188 A G SNP PITPNM3 ENST00000262483 human ensembl 74_37 -1 known missense c.2170 p.C724R 0.076 NULL pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD - no_errors PITPNM3 HGNC ENSG00000091622 35 0 0 21 3 12.5 PITPNM3 0 genome.wustl.edu 37 17 6368010 6368010 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 17 6368010 6368010 C T SNP PITPNM3 ENST00000262483 human ensembl 74_37 -1 known missense c.1972 p.G658R 1.000 NULL pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD - no_errors PITPNM3 HGNC ENSG00000091622 36 0 0 1 27 96.4286 TP53 0 genome.wustl.edu 37 17 7577497 7577497 + Splice_Site SNP A A C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 17 7577497 7577497 A C SNP TP53 ENST00000269305 human ensembl 74_37 -1 known splice_site c.782+2 e6+2 1.000 - - - no_errors TP53 HGNC ENSG00000141510 63 0 0 7 31 81.5789 TMC6 0 genome.wustl.edu 37 17 76121030 76121030 + Silent SNP G G C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 17 76121030 76121030 G C SNP TMC6 ENST00000322914 human ensembl 74_37 -1 known silent c.573 p.G191 0.009 NULL pfam_TMC - no_errors TMC6 HGNC ENSG00000141524 14 0 0 2 11 84.6154 ZNF536 0 genome.wustl.edu 37 19 31040279 31040279 + Silent SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 19 31040279 31040279 G A SNP ZNF536 ENST00000355537 human ensembl 74_37 +1 known silent c.3753 p.P1251 0.274 NULL pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF536 HGNC ENSG00000198597 26 0 0 8 12 60 SIGLEC5 0 genome.wustl.edu 37 19 52130925 52130925 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 19 52130925 52130925 G A SNP SIGLEC5 ENST00000222107 human ensembl 74_37 -1 known missense c.1072 p.R358W 0.000 NULL pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom - no_errors SIGLEC5 HGNC ENSG00000105501 9 0 0 7 4 36.3636 ZNF530 0 genome.wustl.edu 37 19 58118470 58118470 + Missense_Mutation SNP A A C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 19 58118470 58118470 A C SNP ZNF530 ENST00000332854 human ensembl 74_37 +1 known missense c.1577 p.K526T 0.144 pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF530 HGNC ENSG00000183647 71 0 0 60 28 31.8182 TGFBRAP1 0 genome.wustl.edu 37 2 105890146 105890146 + Missense_Mutation SNP A A G TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 2 105890146 105890146 A G SNP TGFBRAP1 ENST00000258449 human ensembl 74_37 -1 known missense c.1667 p.V556A 1.000 NULL pfam_VPS39/TGF_beta_rcpt-assoc_2,pfam_VPS39/TGF_beta_rcpt-assoc_1,pfam_Clathrin_H-chain/VPS_repeat,pfam_Citron - no_errors TGFBRAP1 HGNC ENSG00000135966 42 0 0 11 28 71.7949 IL36A 0 genome.wustl.edu 37 2 113763626 113763626 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 2 113763626 113763626 C T SNP IL36A ENST00000259211 human ensembl 74_37 +1 known missense c.86 p.T29M 0.001 superfamily_Cytokine_IL1-like,smart_IL-1 pfam_IL-1,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1,prints_IL-1_alpha/beta,prints_IL-1_beta - no_errors IL36A HGNC ENSG00000136694 75 0 0 80 9 10.1124 LYPD1 0 genome.wustl.edu 37 2 133403681 133403681 + Silent SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 2 133403681 133403681 G A SNP LYPD1 ENST00000397463 human ensembl 74_37 -1 known silent c.363 p.L121 0.000 NULL NULL - no_errors LYPD1 HGNC ENSG00000150551 48 0 0 30 38 55.8824 XRCC5 0 genome.wustl.edu 37 2 216997075 216997075 + Nonsense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 2 216997075 216997075 C T SNP XRCC5 ENST00000392132 human ensembl 74_37 +1 known nonsense c.1078 p.Q360* 1.000 pfam_Ku70/Ku80_beta-barrel_dom,superfamily_SPOC_like_C_dom,smart_Ku70/Ku80_beta-barrel_dom pfam_Ku_N,pfam_Ku_PK_bind,pfam_Ku70/Ku80_beta-barrel_dom,pfam_Ku_C,superfamily_SPOC_like_C_dom,superfamily_Ku_PK_bind,smart_VWF_A,smart_Ku70/Ku80_beta-barrel_dom - no_errors XRCC5 HGNC ENSG00000079246 103 0 0 68 26 27.6596 CXCR2 0 genome.wustl.edu 37 2 218999946 218999946 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 2 218999946 218999946 G A SNP CXCR2 ENST00000318507 human ensembl 74_37 +1 known missense c.422 p.S141N 1.000 pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CXCR_1/2,prints_GPCR_Rhodpsn,prints_Chemokine_CXCR2,prints_Chemokine_rcpt,prints_Chemokine_CXCR4 - no_errors CXCR2 HGNC ENSG00000180871 81 0 0 39 43 52.439 SP140 0 genome.wustl.edu 37 2 231152636 231152636 + Missense_Mutation SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 2 231152636 231152636 T C SNP SP140 ENST00000392045 human ensembl 74_37 +1 known missense c.1675 p.F559L 0.002 NULL pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom,pfscan_Bromodomain - no_errors SP140 HGNC ENSG00000079263 23 0 0 37 6 13.9535 COL6A3 0 genome.wustl.edu 37 2 238249716 238249716 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 2 238249716 238249716 C T SNP COL6A3 ENST00000295550 human ensembl 74_37 -1 known missense c.7843 p.D2615N 0.884 NULL pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m - no_errors COL6A3 HGNC ENSG00000163359 269 2 0.738007 147 79 34.9558 CAPN13 0 genome.wustl.edu 37 2 30953607 30953607 + RNA SNP G G T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 2 30953607 30953607 G T SNP CAPN13 ENST00000490786 human ensembl 74_37 -1 known rna NULL NULL 0.000 - - - no_errors CAPN13 HGNC ENSG00000162949 64 0 0 13 18 58.0645 ADD2 0 genome.wustl.edu 37 2 70910804 70910804 + Silent SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 2 70910804 70910804 G A SNP ADD2 ENST00000264436 human ensembl 74_37 -1 known silent c.1044 p.A348 0.001 NULL pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N - no_errors ADD2 HGNC ENSG00000075340 50 0 0 13 21 61.7647 VAX2 0 genome.wustl.edu 37 2 71160187 71160187 + Silent SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 2 71160187 71160187 G A SNP VAX2 ENST00000234392 human ensembl 74_37 +1 known silent c.726 p.P242 0.220 NULL pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa - no_errors VAX2 HGNC ENSG00000116035 39 0 0 21 2 8.69565 FAM65C 0 genome.wustl.edu 37 20 49209006 49209006 + Missense_Mutation SNP G G T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 20 49209006 49209006 G T SNP FAM65C ENST00000535356 human ensembl 74_37 -1 known missense c.2452 p.L818I 1.000 NULL superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom - no_errors FAM65C HGNC ENSG00000042062 34 0 0 26 6 18.75 PROKR2 0 genome.wustl.edu 37 20 5283062 5283062 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 20 5283062 5283062 G A SNP PROKR2 ENST00000217270 human ensembl 74_37 -1 known missense c.779 p.T260M 0.995 pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt - no_errors PROKR2 HGNC ENSG00000101292 46 0 0 70 10 12.5 IGLL1 0 genome.wustl.edu 37 22 23917253 23917253 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 22 23917253 23917253 C T SNP IGLL1 ENST00000330377 human ensembl 74_37 -1 known missense c.223 p.G75S 0.584 NULL pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like_dom - no_errors IGLL1 HGNC ENSG00000128322 85 0 0 33 49 59.7561 MYO18B 0 genome.wustl.edu 37 22 26173746 26173746 + Nonsense_Mutation SNP C C A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 22 26173746 26173746 C A SNP MYO18B ENST00000335473 human ensembl 74_37 +1 known nonsense c.2066 p.S689* 1.000 pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom - no_errors MYO18B HGNC ENSG00000133454 106 0 0 46 77 62.6016 PAQR9 0 genome.wustl.edu 37 3 142681581 142681581 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 3 142681581 142681581 C T SNP PAQR9 ENST00000340634 human ensembl 74_37 -1 known missense c.598 p.V200M 0.998 pfam_HlyIII-related pfam_HlyIII-related - no_errors PAQR9 HGNC ENSG00000188582 16 0 0 8 5 38.4615 PLOD2 0 genome.wustl.edu 37 3 145789117 145789117 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 3 145789117 145789117 G A SNP PLOD2 ENST00000282903 human ensembl 74_37 -1 known missense c.1942 p.R648W 1.000 smart_Pro_4_hyd_alph pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph - no_errors PLOD2 HGNC ENSG00000152952 122 0 0 52 33 38.8235 ALG3 0 genome.wustl.edu 37 3 183960348 183960348 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 3 183960348 183960348 G A SNP ALG3 ENST00000397676 human ensembl 74_37 -1 known missense c.1271 p.P424L 0.966 NULL pfam_Glycosyltransferase_ALG3 - no_errors ALG3 HGNC ENSG00000214160 22 0 0 12 6 33.3333 DLG1 0 genome.wustl.edu 37 3 196778537 196778537 + Missense_Mutation SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 3 196778537 196778537 T C SNP DLG1 ENST00000346964 human ensembl 74_37 -1 known missense c.2585 p.E862G 1.000 pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_Guanylate_kin-like pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_MAGUK_PEST_N,pfam_L27_1,pfam_PDZ_assoc,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like - no_errors DLG1 HGNC ENSG00000075711 50 0 0 19 19 50 STT3B 0 genome.wustl.edu 37 3 31661247 31661247 + Silent SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 3 31661247 31661247 C T SNP STT3B ENST00000295770 human ensembl 74_37 +1 known silent c.1252 p.L418 1.000 pfam_Oligo_trans_STT3 pfam_Oligo_trans_STT3 - no_errors STT3B HGNC ENSG00000163527 61 0 0 25 18 41.8605 EPHA3 0 genome.wustl.edu 37 3 89468434 89468434 + Missense_Mutation SNP A A C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 3 89468434 89468434 A C SNP EPHA3 ENST00000336596 human ensembl 74_37 +1 known missense c.1968 p.K656N 1.000 pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom - no_errors EPHA3 HGNC ENSG00000044524 69 0 0 27 22 44.898 CAMK1 0 genome.wustl.edu 37 3 9804598 9804598 + Silent SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 3 9804598 9804598 C T SNP CAMK1 ENST00000256460 human ensembl 74_37 -1 known silent c.429 p.K143 1.000 pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom - no_errors CAMK1 HGNC ENSG00000134072 68 0 0 24 19 44.186 BOD1L1 0 genome.wustl.edu 37 4 13603233 13603233 + Missense_Mutation SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 4 13603233 13603233 T C SNP BOD1L1 ENST00000040738 human ensembl 74_37 -1 known missense c.5291 p.D1764G 0.000 NULL NULL - no_errors BOD1L1 HGNC ENSG00000038219 381 1 0.26178 153 130 45.9364 FAM13A 0 genome.wustl.edu 37 4 89772203 89772203 + Silent SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 4 89772203 89772203 T C SNP FAM13A ENST00000264344 human ensembl 74_37 -1 known silent c.975 p.A325 0.753 NULL pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom - no_errors FAM13A HGNC ENSG00000138640 173 0 0 88 51 36.6906 APC 0 genome.wustl.edu 37 5 112162891 112162891 + Nonsense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 5 112162891 112162891 C T SNP APC ENST00000257430 human ensembl 74_37 +1 known nonsense c.1495 p.R499* 1.000 superfamily_ARM-type_fold,smart_Armadillo pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo - no_errors APC HGNC ENSG00000134982 81 0 0 11 31 73.8095 PCDHB10 0 genome.wustl.edu 37 5 140572514 140572514 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 5 140572514 140572514 C T SNP PCDHB10 ENST00000239446 human ensembl 74_37 +1 known missense c.389 p.A130V 0.598 superfamily_Cadherin-like,pfscan_Cadherin pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors PCDHB10 HGNC ENSG00000120324 96 0 0 9 21 70 TARS 0 genome.wustl.edu 37 5 33455057 33455057 + Nonsense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 5 33455057 33455057 G A SNP TARS ENST00000265112 human ensembl 74_37 +1 known nonsense c.461 p.W154* 1.000 superfamily_Thr/Ala-tRNA-synth_IIc_edit,tigrfam_Thr-tRNA-ligase_IIa pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,prints_Thr-tRNA-ligase_IIa,pfscan_aa-tRNA-synth_II,tigrfam_Thr-tRNA-ligase_IIa - no_errors TARS HGNC ENSG00000113407 47 0 0 30 40 57.1429 IRX1 0 genome.wustl.edu 37 5 3600203 3600203 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 5 3600203 3600203 G A SNP IRX1 ENST00000302006 human ensembl 74_37 +1 known missense c.1141 p.A381T 0.318 NULL pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom - no_errors IRX1 HGNC ENSG00000170549 31 0 0 37 3 7.5 GPR98 0 genome.wustl.edu 37 5 89992954 89992954 + Missense_Mutation SNP G G T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 5 89992954 89992954 G T SNP GPR98 ENST00000405460 human ensembl 74_37 +1 known missense c.8146 p.G2716C 1.000 NULL pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like - no_errors GPR98 HGNC ENSG00000164199 116 0 0 57 3 5 MYB 0 genome.wustl.edu 37 6 135517008 135517008 + Silent SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 6 135517008 135517008 G A SNP MYB ENST00000341911 human ensembl 74_37 +1 known silent c.1071 p.L357 1.000 NULL pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom - no_errors MYB HGNC ENSG00000118513 53 0 0 32 17 34.6939 MDGA1 0 genome.wustl.edu 37 6 37626035 37626035 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 6 37626035 37626035 C T SNP MDGA1 ENST00000297153 human ensembl 74_37 -1 known missense c.368 p.R123H 1.000 smart_Ig_sub,pfscan_Ig-like_dom pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Ig-like_dom - no_errors MDGA1 HGNC ENSG00000112139 26 0 0 9 4 30.7692 LRFN2 0 genome.wustl.edu 37 6 40399786 40399786 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 6 40399786 40399786 G A SNP LRFN2 ENST00000338305 human ensembl 74_37 -1 known missense c.1067 p.A356V 1.000 pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom - no_errors LRFN2 HGNC ENSG00000156564 47 0 0 14 24 63.1579 TAS2R5 0 genome.wustl.edu 37 7 141491041 141491041 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 7 141491041 141491041 C T SNP TAS2R5 ENST00000247883 human ensembl 74_37 +1 known missense c.880 p.R294W 0.023 NULL pfam_TAS2_rcpt - no_errors TAS2R5 HGNC ENSG00000127366 122 0 0 53 81 60.4478 POLM 0 genome.wustl.edu 37 7 44120346 44120346 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 7 44120346 44120346 G A SNP POLM ENST00000242248 human ensembl 74_37 -1 known missense c.358 p.R120W 0.764 superfamily_BRCT_dom,pirsf_TdT/Mu pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_b-like_N,superfamily_DNA_pol_lambd_fingers_domain,superfamily_BRCT_dom,smart_DNA-dir_DNA_pol_X,pirsf_TdT/Mu,pfscan_BRCT_dom,prints_TdT/Mu,prints_DNA_pol_X,prints_DNA_pol_X_beta-like - no_errors POLM HGNC ENSG00000122678 181 0 0 115 44 27.673 PKD1L1 0 genome.wustl.edu 37 7 47937792 47937792 + Splice_Site SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 7 47937792 47937792 C T SNP PKD1L1 ENST00000289672 human ensembl 74_37 -1 known splice_site c.2065-1 e14-1 0.948 - - - no_errors PKD1L1 HGNC ENSG00000158683 22 0 0 12 5 29.4118 HEATR2 0 genome.wustl.edu 37 7 813704 813704 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 7 813704 813704 G A SNP HEATR2 ENST00000297440 human ensembl 74_37 +1 known missense c.1951 p.E651K 0.841 superfamily_ARM-type_fold pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2 - no_errors HEATR2 HGNC ENSG00000164818 178 0 0 59 76 56.2963 AKAP9 0 genome.wustl.edu 37 7 91731945 91731945 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 7 91731945 91731945 G A SNP AKAP9 ENST00000359028 human ensembl 74_37 +1 known missense c.11147 p.R3716Q 1.000 pfam_PACT_domain pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB - no_errors AKAP9 HGNC ENSG00000127914 87 0 0 55 27 32.9268 CSMD3 0 genome.wustl.edu 37 8 113326718 113326718 + Missense_Mutation SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 8 113326718 113326718 T C SNP CSMD3 ENST00000297405 human ensembl 74_37 -1 known missense c.7489 p.T2497A 1.000 pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP - no_errors CSMD3 HGNC ENSG00000164796 90 0 0 75 48 39.0244 ATAD2 0 genome.wustl.edu 37 8 124382158 124382158 + Missense_Mutation SNP T T A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 8 124382158 124382158 T A SNP ATAD2 ENST00000287394 human ensembl 74_37 -1 known missense c.834 p.E278D 0.866 NULL pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain - no_errors ATAD2 HGNC ENSG00000156802 14 0 0 27 4 12.9032 ADAM28 0 genome.wustl.edu 37 8 24184071 24184071 + Missense_Mutation SNP A A C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 8 24184071 24184071 A C SNP ADAM28 ENST00000265769 human ensembl 74_37 +1 known missense c.895 p.T299P 0.002 pfam_Peptidase_M12B,pfscan_Peptidase_M12B pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin - no_errors ADAM28 HGNC ENSG00000042980 128 0 0 101 25 19.8413 ZNF462 0 genome.wustl.edu 37 9 109686821 109686821 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 9 109686821 109686821 G A SNP ZNF462 ENST00000457913 human ensembl 74_37 +1 known missense c.628 p.V210I 0.036 NULL smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF462 HGNC ENSG00000148143 57 0 0 48 6 11.1111 TLR4 0 genome.wustl.edu 37 9 120475034 120475034 + Missense_Mutation SNP C C A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 9 120475034 120475034 C A SNP TLR4 ENST00000355622 human ensembl 74_37 +1 known missense c.628 p.L210M 0.158 pirsf_Toll-like_receptor,smart_Leu-rich_rpt_typical-subtyp pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom - no_errors TLR4 HGNC ENSG00000136869 64 0 0 54 20 27.027 SMARCA2 0 genome.wustl.edu 37 9 2039767 2039767 + Silent SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 9 2039767 2039767 G A SNP SMARCA2 ENST00000349721 human ensembl 74_37 +1 known silent c.657 p.Q219 0.987 NULL pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,superfamily_RNaseH-like_dom,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain,prints_Bromodomain - no_errors SMARCA2 HGNC ENSG00000080503 15 0 0 50 3 5.66038 RNF38 0 genome.wustl.edu 37 9 36339763 36339763 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 9 36339763 36339763 G A SNP RNF38 ENST00000259605 human ensembl 74_37 -1 known missense c.1534 p.R512W 1.000 NULL pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING - no_errors RNF38 HGNC ENSG00000137075 25 0 0 4 4 50 ANKRD19P 0 genome.wustl.edu 37 9 95600002 95600002 + RNA SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 9 95600002 95600002 C T SNP ANKRD19P ENST00000464387 human ensembl 74_37 +1 known rna NULL NULL 0.002 - - - no_errors ANKRD19P HGNC ENSG00000187984 19 0 0 5 8 61.5385 SLC6A8 0 genome.wustl.edu 37 X 152960203 152960203 + Silent SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c X 152960203 152960203 C T SNP SLC6A8 ENST00000253122 human ensembl 74_37 +1 known silent c.1626 p.Y542 0.948 pfam_Na/ntran_symport,pfscan_Na/ntran_symport pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_creatine - no_errors SLC6A8 HGNC ENSG00000130821 58 0 0 60 10 14.2857 ACOT9 0 genome.wustl.edu 37 X 23724827 23724827 + Missense_Mutation SNP A A T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c X 23724827 23724827 A T SNP ACOT9 ENST00000379303 human ensembl 74_37 -1 known missense c.760 p.S254T 0.218 NULL pfam_Thioestr_supf - no_errors ACOT9 HGNC ENSG00000123130 45 0 0 5 48 90.566 MAGEB6 0 genome.wustl.edu 37 X 26212897 26212897 + Missense_Mutation SNP G G A TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c X 26212897 26212897 G A SNP MAGEB6 ENST00000379034 human ensembl 74_37 +1 known missense c.934 p.G312S 0.000 pfam_MAGE,pfscan_MAGE pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE - no_errors MAGEB6 HGNC ENSG00000176746 182 0 0 109 94 46.3054 FAM47A 0 genome.wustl.edu 37 X 34148843 34148843 + Missense_Mutation SNP C C T TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c X 34148843 34148843 C T SNP FAM47A ENST00000346193 human ensembl 74_37 -1 known missense c.1553 p.R518H 0.000 NULL NULL - no_errors FAM47A HGNC ENSG00000185448 40 0 0 50 7 12.2807 TMEM47 0 genome.wustl.edu 37 X 34648573 34648573 + Missense_Mutation SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c X 34648573 34648573 T C SNP TMEM47 ENST00000275954 human ensembl 74_37 -1 known missense c.403 p.I135V 1.000 pfam_Lipome_HGMIC_fus_partner-like pfam_Lipome_HGMIC_fus_partner-like - no_errors TMEM47 HGNC ENSG00000147027 37 0 0 24 24 50 PFKFB1 0 genome.wustl.edu 37 X 54959866 54959866 + Silent SNP T T C TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c X 54959866 54959866 T C SNP PFKFB1 ENST00000375006 human ensembl 74_37 -1 known silent c.1386 p.E462 1.000 pirsf_Bifunct_6PFK/fruc_bisP_Ptase pfam_6Phosfructo_kin,pfam_His_Pase_superF_clade-1,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin - no_errors PFKFB1 HGNC ENSG00000158571 46 0 0 52 13 20 HECW1 0 genome.wustl.edu 37 7 43540325 43540325 + Frame_Shift_Del DEL G G - TCGA-F1-6875-01A-11D-2053-08 TCGA-F1-6875-11A-01D-2053-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq ea1cac20-88c1-4257-9cdb-d2890eb2e123 f3a4fd8d-1f1c-48ab-854f-6717fd62c46c 7 43540325 43540325 G - DEL HECW1 ENST00000395891 human ensembl 74_37 +1 known frame_shift_del c.3465 p.G1156fs 1.000 NULL pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom - no_errors HECW1 HGNC ENSG00000002746 197 0 0 218 20 8.40336