Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error default_gene_name gene_name_source ensembl_gene_id tier title header normal_ref_reads normal_var_reads normal_VAF tumor_ref_reads tumor_var_reads tumor_VAF LOC101927345 0 genome.wustl.edu 37 1 143378228 143378228 + RNA SNP A A G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 143378228 143378228 A G SNP LOC101927345 ENST00000428624 human ensembl 74_37 +1 known rna NULL NULL 0.006 - - - no_errors RP11-435B5.5 Clone_based_vega_gene ENSG00000238261 27 0 0 32 6 15.7895 HIST2H2BF 0 genome.wustl.edu 37 1 149783796 149783796 + Missense_Mutation SNP T T C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 149783796 149783796 T C SNP HIST2H2BF ENST00000427880 human ensembl 74_37 -1 known missense c.83 p.K28R 1.000 superfamily_Histone-fold,smart_Histone_H2B pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B - no_errors HIST2H2BF HGNC ENSG00000203814 234 0 0 212 45 17.5097 TDRKH 0 genome.wustl.edu 37 1 151748570 151748570 + Splice_Site SNP A A T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 151748570 151748570 A T SNP TDRKH ENST00000368822 human ensembl 74_37 -1 known splice_site c.1217+2 e7+2 1.000 - - - no_errors TDRKH HGNC ENSG00000182134 56 0 0 64 14 17.9487 FLG 0 genome.wustl.edu 37 1 152276817 152276817 + Silent SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 152276817 152276817 G A SNP FLG ENST00000368799 human ensembl 74_37 -1 known silent c.10545 p.S3515 0.000 pfam_Filaggrin pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin - no_errors FLG HGNC ENSG00000143631 360 0 0 320 71 18.1586 IQGAP3 0 genome.wustl.edu 37 1 156508624 156508624 + Silent SNP A A G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 156508624 156508624 A G SNP IQGAP3 ENST00000361170 human ensembl 74_37 -1 known silent c.3258 p.T1086 0.773 pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,smart_RasGAP,pfscan_RasGAP pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_CH-domain,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_RasGAP - no_errors IQGAP3 HGNC ENSG00000183856 26 0 0 29 7 19.4444 CDK11A 0 genome.wustl.edu 37 1 1650859 1650859 + Missense_Mutation SNP G G C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 1650859 1650859 G C SNP CDK11A ENST00000404249 human ensembl 74_37 -1 known missense c.263 p.P88R 1.000 NULL pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom - no_errors CDK11A HGNC ENSG00000008128 246 0 0 223 16 6.69456 CDK11A 0 genome.wustl.edu 37 1 1650867 1650867 + Silent SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 1650867 1650867 G T SNP CDK11A ENST00000404249 human ensembl 74_37 -1 known silent c.255 p.I85 1.000 NULL pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom - no_errors CDK11A HGNC ENSG00000008128 243 1 0.409836 230 18 7.25806 HMCN1 0 genome.wustl.edu 37 1 186081953 186081953 + Nonsense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 186081953 186081953 C T SNP HMCN1 ENST00000271588 human ensembl 74_37 +1 known nonsense c.10999 p.R3667* 1.000 pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom - no_errors HMCN1 HGNC ENSG00000143341 48 0 0 33 10 23.2558 KCNT2 0 genome.wustl.edu 37 1 196303015 196303015 + Silent SNP A A G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 196303015 196303015 A G SNP KCNT2 ENST00000294725 human ensembl 74_37 -1 known silent c.1959 p.D653 1.000 NULL pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom - no_errors KCNT2 HGNC ENSG00000162687 29 0 0 17 10 37.037 CFHR5 0 genome.wustl.edu 37 1 196953209 196953209 + Missense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 196953209 196953209 G T SNP CFHR5 ENST00000367414 human ensembl 74_37 +1 known missense c.444 p.E148D 0.001 pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP - no_errors CFHR5 HGNC ENSG00000134389 62 0 0 66 22 25 IL19 0 genome.wustl.edu 37 1 207010359 207010359 + Missense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 207010359 207010359 G T SNP IL19 ENST00000340758 human ensembl 74_37 +1 known missense c.315 p.Q105H 0.676 pfam_IL-10/19/20/24/26_fam,superfamily_4_helix_cytokine-like_core pfam_IL-10/19/20/24/26_fam,superfamily_4_helix_cytokine-like_core,prints_IL-19,prints_IL-24 - no_errors IL19 HGNC ENSG00000142224 40 0 0 49 6 10.9091 YOD1 0 genome.wustl.edu 37 1 207222944 207222944 + Silent SNP T T G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 207222944 207222944 T G SNP YOD1 ENST00000315927 human ensembl 74_37 -1 known silent c.468 p.A156 0.997 pfam_OTU,pfscan_OTU pfam_OTU,pfscan_OTU - no_errors YOD1 HGNC ENSG00000180667 48 0 0 44 8 15.3846 LAMB3 0 genome.wustl.edu 37 1 209798993 209798993 + Missense_Mutation SNP C C A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 209798993 209798993 C A SNP LAMB3 ENST00000356082 human ensembl 74_37 -1 known missense c.1976 p.R659M 1.000 NULL pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_Laminin_N - no_errors LAMB3 HGNC ENSG00000196878 112 0 0 72 28 28 OR2T2 0 genome.wustl.edu 37 1 248616492 248616492 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 248616492 248616492 C T SNP OR2T2 ENST00000342927 human ensembl 74_37 +1 known missense c.394 p.R132W 0.000 pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn - no_errors OR2T2 HGNC ENSG00000196240 73 0 0 78 10 11.3636 PRDM16 0 genome.wustl.edu 37 1 3319370 3319370 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 3319370 3319370 G A SNP PRDM16 ENST00000270722 human ensembl 74_37 +1 known missense c.692 p.R231H 1.000 smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2 - no_errors PRDM16 HGNC ENSG00000142611 59 0 0 43 9 17.3077 MKI67 0 genome.wustl.edu 37 10 129899811 129899811 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 10 129899811 129899811 C T SNP MKI67 ENST00000368654 human ensembl 74_37 -1 known missense c.9416 p.G3139E 0.000 NULL pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom - no_errors MKI67 HGNC ENSG00000148773 145 0 0 136 30 18.0723 RBP3 0 genome.wustl.edu 37 10 48387918 48387918 + Missense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 10 48387918 48387918 G T SNP RBP3 ENST00000224600 human ensembl 74_37 -1 known missense c.2960 p.A987D 0.875 NULL pfam_Interphotoreceptor_retinol-bd,pfam_Interphotorcpt_retinol-bd_N,smart_Interphotoreceptor_retinol-bd - no_errors RBP3 HGNC ENSG00000107618 117 0 0 141 25 15.0602 C10orf71 0 genome.wustl.edu 37 10 50530848 50530848 + Silent SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 10 50530848 50530848 G A SNP C10orf71 ENST00000374144 human ensembl 74_37 +1 known silent c.258 p.P86 0.000 NULL NULL - no_errors C10orf71 HGNC ENSG00000177354 104 0 0 123 27 18 COL13A1 0 genome.wustl.edu 37 10 71657242 71657242 + Missense_Mutation SNP C C A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 10 71657242 71657242 C A SNP COL13A1 ENST00000356340 human ensembl 74_37 +1 known missense c.669 p.S223R 0.958 NULL pfam_Collagen - no_errors COL13A1 HGNC ENSG00000197467 47 0 0 56 9 13.8462 DYNC2H1 0 genome.wustl.edu 37 11 103006490 103006490 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 103006490 103006490 G A SNP DYNC2H1 ENST00000398093 human ensembl 74_37 +1 known missense c.2387 p.R796Q 1.000 NULL pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase - no_errors DYNC2H1 HGNC ENSG00000187240 29 0 0 22 6 21.4286 MUC2 0 genome.wustl.edu 37 11 1093107 1093107 + Silent SNP A A T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 1093107 1093107 A T SNP MUC2 ENST00000441003 human ensembl 74_37 +1 known silent c.4926 p.P1642 0.281 NULL pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C - no_errors MUC2 HGNC ENSG00000198788 19 0 0 24 4 14.2857 CDON 0 genome.wustl.edu 37 11 125891265 125891265 + Missense_Mutation SNP T T G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 125891265 125891265 T G SNP CDON ENST00000392693 human ensembl 74_37 -1 known missense c.227 p.K76T 0.184 smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom - no_errors CDON HGNC ENSG00000064309 78 0 0 56 11 16.4179 TRPM5 0 genome.wustl.edu 37 11 2435394 2435394 + Missense_Mutation SNP A A G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 2435394 2435394 A G SNP TRPM5 ENST00000452833 human ensembl 74_37 -1 known missense c.1793 p.F598S 0.912 NULL superfamily_Ankyrin_rpt-contain_dom - no_errors TRPM5 HGNC ENSG00000070985 26 0 0 28 4 12.5 TRIM68 0 genome.wustl.edu 37 11 4622295 4622295 + Missense_Mutation SNP C C G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 4622295 4622295 C G SNP TRIM68 ENST00000300747 human ensembl 74_37 -1 known missense c.869 p.R290P 0.998 pfscan_B30.2/SPRY pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING - no_errors TRIM68 HGNC ENSG00000167333 129 0 0 123 15 10.8696 OR51D1 0 genome.wustl.edu 37 11 4661620 4661620 + Silent SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 4661620 4661620 G T SNP OR51D1 ENST00000357605 human ensembl 74_37 +1 known silent c.600 p.L200 1.000 pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn - no_errors OR51D1 HGNC ENSG00000197428 114 0 0 102 17 14.2857 OR51E1 0 genome.wustl.edu 37 11 4673886 4673886 + Missense_Mutation SNP G G C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 4673886 4673886 G C SNP OR51E1 ENST00000396952 human ensembl 74_37 +1 known missense c.130 p.G44R 1.000 pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn - no_errors OR51E1 HGNC ENSG00000180785 99 0 0 106 34 24.2857 OR52R1 0 genome.wustl.edu 37 11 4824825 4824825 + Missense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 4824825 4824825 G T SNP OR52R1 ENST00000380382 human ensembl 74_37 -1 known missense c.1023 p.F341L 0.986 pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn - no_errors OR52R1 HGNC ENSG00000176937 171 0 0 234 33 12.3596 OR51G2 0 genome.wustl.edu 37 11 4935980 4935980 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 4935980 4935980 C T SNP OR51G2 ENST00000322013 human ensembl 74_37 -1 known missense c.914 p.R305Q 0.961 prints_GPCR_Rhodpsn pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn - no_errors OR51G2 HGNC ENSG00000176893 47 0 0 40 13 24.5283 OR8J3 0 genome.wustl.edu 37 11 55904869 55904869 + Missense_Mutation SNP A A G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 55904869 55904869 A G SNP OR8J3 ENST00000301529 human ensembl 74_37 -1 known missense c.326 p.V109A 0.000 pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn - no_errors OR8J3 HGNC ENSG00000167822 128 0 0 86 27 23.8938 DCHS1 0 genome.wustl.edu 37 11 6650775 6650775 + Missense_Mutation SNP G G C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 6650775 6650775 G C SNP DCHS1 ENST00000299441 human ensembl 74_37 -1 known missense c.5069 p.S1690C 0.974 pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors DCHS1 HGNC ENSG00000166341 28 0 0 16 4 20 C11orf80 0 genome.wustl.edu 37 11 66581429 66581429 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 66581429 66581429 G A SNP C11orf80 ENST00000360962 human ensembl 74_37 +1 known missense c.1132 p.D378N 0.999 NULL NULL - no_errors C11orf80 HGNC ENSG00000173715 30 0 0 27 7 20.5882 FUT4 0 genome.wustl.edu 37 11 94278513 94278513 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 94278513 94278513 C T SNP FUT4 ENST00000358752 human ensembl 74_37 +1 known missense c.1214 p.A405V 1.000 pfam_Glyco_trans_10 pfam_Glyco_trans_10 - no_errors FUT4 HGNC ENSG00000196371 37 0 0 19 8 29.6296 PIWIL4 0 genome.wustl.edu 37 11 94340624 94340624 + Missense_Mutation SNP C C A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 11 94340624 94340624 C A SNP PIWIL4 ENST00000299001 human ensembl 74_37 +1 known missense c.1658 p.S553Y 0.952 pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi pfam_Piwi,pfam_PAZ_dom,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi - no_errors PIWIL4 HGNC ENSG00000134627 39 0 0 24 8 25 RAB35 0 genome.wustl.edu 37 12 120535069 120535069 + Nonsense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 12 120535069 120535069 G A SNP RAB35 ENST00000229340 human ensembl 74_37 -1 known nonsense c.586 p.R196* 1.000 superfamily_P-loop_NTPase,smart_Ran_GTPase pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom - no_errors RAB35 HGNC ENSG00000111737 95 0 0 72 26 26.5306 FAR2 0 genome.wustl.edu 37 12 29474774 29474774 + Missense_Mutation SNP G G C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 12 29474774 29474774 G C SNP FAR2 ENST00000182377 human ensembl 74_37 +1 known missense c.1174 p.E392Q 1.000 pfam_FAR pfam_Male_sterile_NAD-bd,pfam_FAR,pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase,pfam_Polysac_CapD-like - no_errors FAR2 HGNC ENSG00000064763 93 0 0 432 66 13.253 LRRK2 0 genome.wustl.edu 37 12 40760826 40760826 + Missense_Mutation SNP T T G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 12 40760826 40760826 T G SNP LRRK2 ENST00000298910 human ensembl 74_37 +1 known missense c.7409 p.M2470R 1.000 superfamily_WD40_repeat_dom pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom - no_errors LRRK2 HGNC ENSG00000188906 34 0 0 27 9 25 CNTN1 0 genome.wustl.edu 37 12 41337868 41337868 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 12 41337868 41337868 G A SNP CNTN1 ENST00000347616 human ensembl 74_37 +1 known missense c.1579 p.A527T 0.045 pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom - no_errors CNTN1 HGNC ENSG00000018236 37 0 0 43 15 25.8621 ANKRD52 0 genome.wustl.edu 37 12 56647085 56647085 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 12 56647085 56647085 C T SNP ANKRD52 ENST00000267116 human ensembl 74_37 -1 known missense c.1087 p.A363T 1.000 pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt - no_errors ANKRD52 HGNC ENSG00000139645 77 0 0 32 165 83.7563 GLIPR1L1 0 genome.wustl.edu 37 12 75728626 75728626 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 12 75728626 75728626 G A SNP GLIPR1L1 ENST00000378695 human ensembl 74_37 +1 known missense c.118 p.A40T 0.000 pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1 pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1,prints_V5_allergen - no_errors GLIPR1L1 HGNC ENSG00000173401 87 0 0 62 10 13.8889 TMEM255B 0 genome.wustl.edu 37 13 114514841 114514841 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 13 114514841 114514841 C T SNP TMEM255B ENST00000375353 human ensembl 74_37 +1 known missense c.946 p.P316S 1.000 NULL NULL - no_errors TMEM255B HGNC ENSG00000184497 156 0 0 141 57 28.7879 FLT3 0 genome.wustl.edu 37 13 28608254 28608254 + Missense_Mutation SNP A A G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 13 28608254 28608254 A G SNP FLT3 ENST00000380982 human ensembl 74_37 -1 known missense c.1802 p.L601P 1.000 superfamily_Kinase-like_dom pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom - no_errors FLT3 HGNC ENSG00000122025 55 0 0 35 5 12.5 IPO5 0 genome.wustl.edu 37 13 98634835 98634835 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 13 98634835 98634835 G A SNP IPO5 ENST00000261574 human ensembl 74_37 +1 known missense c.223 p.E75K 1.000 superfamily_ARM-type_fold,pfscan_Importin-beta_N pfam_HEAT,superfamily_ARM-type_fold,pfscan_Importin-beta_N - no_errors IPO5 HGNC ENSG00000065150 37 0 0 43 19 30.6452 EFS 0 genome.wustl.edu 37 14 23828604 23828604 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 14 23828604 23828604 C T SNP EFS ENST00000216733 human ensembl 74_37 -1 known missense c.1083 p.M361I 0.000 NULL pfam_CAS_DUF3513,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain - no_errors EFS HGNC ENSG00000100842 101 0 0 83 27 24.5455 PRPF39 0 genome.wustl.edu 37 14 45578844 45578844 + Missense_Mutation SNP A A T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 14 45578844 45578844 A T SNP PRPF39 ENST00000355765 human ensembl 74_37 +1 known missense c.1037 p.K346I 1.000 NULL smart_HAT - no_errors PRPF39 HGNC ENSG00000185246 12 0 0 10 4 28.5714 TRPM1 0 genome.wustl.edu 37 15 31334409 31334409 + Missense_Mutation SNP T T C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 15 31334409 31334409 T C SNP TRPM1 ENST00000542188 human ensembl 74_37 -1 known missense c.1883 p.K628R 1.000 NULL pfam_Ion_trans_dom - no_errors TRPM1 HGNC ENSG00000134160 20 0 0 22 7 24.1379 SEMA6D 0 genome.wustl.edu 37 15 48056166 48056166 + Silent SNP T T C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 15 48056166 48056166 T C SNP SEMA6D ENST00000316364 human ensembl 74_37 +1 known silent c.867 p.D289 1.000 pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom - no_errors SEMA6D HGNC ENSG00000137872 86 0 0 88 14 13.7255 SHC4 0 genome.wustl.edu 37 15 49255112 49255112 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 15 49255112 49255112 C T SNP SHC4 ENST00000332408 human ensembl 74_37 -1 known missense c.101 p.R34Q 1.000 NULL pfam_PTB/PI_dom,pfam_SH2,smart_PTB/PI_dom,smart_SH2,pfscan_PTB/PI_dom,pfscan_SH2,prints_PID_Shc-like,prints_SH2 - no_errors SHC4 HGNC ENSG00000185634 164 0 0 96 26 21.3115 C15orf27 0 genome.wustl.edu 37 15 76430152 76430152 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 15 76430152 76430152 G A SNP C15orf27 ENST00000388942 human ensembl 74_37 +1 known missense c.143 p.R48Q 1.000 NULL NULL - no_errors C15orf27 HGNC ENSG00000169758 112 0 0 65 24 26.9663 NKD1 0 genome.wustl.edu 37 16 50667166 50667166 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 16 50667166 50667166 G A SNP NKD1 ENST00000268459 human ensembl 74_37 +1 known missense c.887 p.R296H 1.000 NULL pfscan_EF_hand_dom - no_errors NKD1 HGNC ENSG00000140807 177 0 0 119 37 23.7179 SLC38A8 0 genome.wustl.edu 37 16 84075604 84075604 + Silent SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 16 84075604 84075604 G A SNP SLC38A8 ENST00000299709 human ensembl 74_37 -1 known silent c.159 p.G53 0.029 pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease - no_errors SLC38A8 HGNC ENSG00000166558 152 0 0 94 36 27.6923 SLC43A2 0 genome.wustl.edu 37 17 1494653 1494653 + Missense_Mutation SNP T T C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 17 1494653 1494653 T C SNP SLC43A2 ENST00000382147 human ensembl 74_37 -1 known missense c.841 p.S281G 0.005 pfam_MFS,superfamily_MFS_dom_general_subst_transpt pfam_MFS,superfamily_MFS_dom_general_subst_transpt - no_errors SLC43A2 HGNC ENSG00000167703 113 0 0 63 25 28.4091 WSB1 0 genome.wustl.edu 37 17 25628925 25628925 + Missense_Mutation SNP G G C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 17 25628925 25628925 G C SNP WSB1 ENST00000262394 human ensembl 74_37 +1 known missense c.152 p.W51S 1.000 superfamily_WD40_repeat_dom pfam_WD40_repeat,pfam_SOCS_C,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep - no_errors WSB1 HGNC ENSG00000109046 165 0 0 105 30 22.2222 ALOX15 0 genome.wustl.edu 37 17 4535309 4535309 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 17 4535309 4535309 G A SNP ALOX15 ENST00000545513 human ensembl 74_37 -1 known missense c.1750 p.R584W 1.000 pfam_LipOase_C,superfamily_LipOase_C pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C - no_errors ALOX15 HGNC ENSG00000161905 54 0 0 41 10 19.6078 ZACN 0 genome.wustl.edu 37 17 74075792 74075792 + Nonsense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 17 74075792 74075792 C T SNP ZACN ENST00000334586 human ensembl 74_37 +1 known nonsense c.232 p.R78* 0.984 pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM - no_errors ZACN HGNC ENSG00000186919 64 0 0 33 8 19.5122 AFMID 0 genome.wustl.edu 37 17 76187140 76187140 + Missense_Mutation SNP A A T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 17 76187140 76187140 A T SNP AFMID ENST00000327898 human ensembl 74_37 +1 known missense c.153 p.E51D 0.970 NULL pfam_AB_hydrolase_3 - no_errors AFMID HGNC ENSG00000183077 37 0 0 32 2 5.88235 CCDC102B 0 genome.wustl.edu 37 18 66504246 66504246 + Silent SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 18 66504246 66504246 G A SNP CCDC102B ENST00000319445 human ensembl 74_37 +1 known silent c.246 p.K82 1.000 NULL NULL - no_errors CCDC102B HGNC ENSG00000150636 155 0 0 195 26 11.7647 NETO1 0 genome.wustl.edu 37 18 70417353 70417353 + Silent SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 18 70417353 70417353 G A SNP NETO1 ENST00000327305 human ensembl 74_37 -1 known silent c.1485 p.I495 0.525 NULL pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt - no_errors NETO1 HGNC ENSG00000166342 45 0 0 51 6 10.5263 PGLYRP2 0 genome.wustl.edu 37 19 15582872 15582872 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 19 15582872 15582872 G A SNP PGLYRP2 ENST00000292609 human ensembl 74_37 -1 known missense c.1172 p.A391V 0.000 superfamily_Amidase_domain,smart_PGRP_domain_met/bac pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain - no_errors PGLYRP2 HGNC ENSG00000161031 41 0 0 21 12 36.3636 GNG7 0 genome.wustl.edu 37 19 2515092 2515092 + Missense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 19 2515092 2515092 G T SNP GNG7 ENST00000382159 human ensembl 74_37 -1 known missense c.135 p.N45K 0.983 pfam_G-protein_gamma-like_dom,superfamily_G-protein_gamma-like_dom,smart_G-protein_gamma-like_dom,pfscan_G-protein_gamma-like_dom pfam_G-protein_gamma-like_dom,superfamily_G-protein_gamma-like_dom,smart_G-protein_gamma-like_dom,pfscan_G-protein_gamma-like_dom,prints_Gprotein-gamma - no_errors GNG7 HGNC ENSG00000176533 89 0 0 46 23 33.3333 C19orf47 0 genome.wustl.edu 37 19 40829971 40829971 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 19 40829971 40829971 G A SNP C19orf47 ENST00000582783 human ensembl 74_37 -1 known missense c.716 p.T239M 0.996 NULL superfamily_SAM/pointed - no_errors C19orf47 HGNC ENSG00000160392 115 0 0 79 25 24.0385 CYP2A13 0 genome.wustl.edu 37 19 41596049 41596049 + Missense_Mutation SNP A A T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 19 41596049 41596049 A T SNP CYP2A13 ENST00000330436 human ensembl 74_37 +1 known missense c.441 p.E147D 0.967 pfam_Cyt_P450,superfamily_Cyt_P450 pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV - no_errors CYP2A13 HGNC ENSG00000197838 70 0 0 36 17 32.0755 DHX34 0 genome.wustl.edu 37 19 47858523 47858523 + Silent SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 19 47858523 47858523 G A SNP DHX34 ENST00000328771 human ensembl 74_37 +1 known silent c.933 p.S311 1.000 pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C - no_errors DHX34 HGNC ENSG00000134815 200 0 0 71 88 55.3459 ZNF584 0 genome.wustl.edu 37 19 58928789 58928789 + Nonsense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 19 58928789 58928789 G T SNP ZNF584 ENST00000306910 human ensembl 74_37 +1 known nonsense c.904 p.E302* 0.000 smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF584 HGNC ENSG00000171574 72 0 0 60 39 39.3939 ZNF584 0 genome.wustl.edu 37 19 58929002 58929002 + Missense_Mutation SNP C C A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 19 58929002 58929002 C A SNP ZNF584 ENST00000306910 human ensembl 74_37 +1 known missense c.1117 p.Q373K 1.000 smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF584 HGNC ENSG00000171574 70 0 0 64 27 29.6703 MUC16 0 genome.wustl.edu 37 19 9090085 9090085 + Missense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 19 9090085 9090085 G T SNP MUC16 ENST00000397910 human ensembl 74_37 -1 known missense c.1730 p.T577K 0.000 NULL pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom - no_errors MUC16 HGNC ENSG00000181143 39 0 0 24 4 14.2857 RPL23AP7 0 genome.wustl.edu 37 2 114369731 114369731 + RNA SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 114369731 114369731 G A SNP RPL23AP7 ENST00000391616 human ensembl 74_37 -1 known rna NULL NULL 1.000 - - - no_errors RPL23AP7 HGNC ENSG00000240356 90 0 0 73 18 19.7802 LRP1B 0 genome.wustl.edu 37 2 141232848 141232848 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 141232848 141232848 C T SNP LRP1B ENST00000389484 human ensembl 74_37 -1 known missense c.9484 p.G3162R 1.000 pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt - no_errors LRP1B HGNC ENSG00000168702 42 0 0 42 12 22.2222 STAM2 0 genome.wustl.edu 37 2 152992030 152992030 + Silent SNP A A C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 152992030 152992030 A C SNP STAM2 ENST00000263904 human ensembl 74_37 -1 known silent c.792 p.T264 0.992 superfamily_SH3_domain pfam_VHS,pfam_SH3_domain,pfam_SH3_2,pfam_Ubiquitin-int_motif,superfamily_ENTH_VHS,superfamily_SH3_domain,smart_VHS_subgr,smart_Ubiquitin-int_motif,smart_SH3_domain,pfscan_SH3_domain,pfscan_Ubiquitin-int_motif,pfscan_VHS,prints_SH3_domain,prints_p67phox - no_errors STAM2 HGNC ENSG00000115145 54 0 0 61 5 7.57576 DPP4 0 genome.wustl.edu 37 2 162891790 162891790 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 162891790 162891790 C T SNP DPP4 ENST00000360534 human ensembl 74_37 -1 known missense c.658 p.G220S 1.000 pfam_Peptidase_S9B pfam_Peptidase_S9B,pfam_Peptidase_S9 - no_errors DPP4 HGNC ENSG00000197635 52 0 0 56 19 25.3333 TTN 0 genome.wustl.edu 37 2 179643826 179643826 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 179643826 179643826 C T SNP TTN ENST00000342992 human ensembl 74_37 -1 known missense c.3983 p.G1328D 1.000 pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom - no_errors TTN HGNC ENSG00000155657 38 0 0 23 5 17.8571 AOX1 0 genome.wustl.edu 37 2 201531408 201531408 + Splice_Site SNP A A G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 201531408 201531408 A G SNP AOX1 ENST00000374700 human ensembl 74_37 +1 known splice_site c.3544-2 e32-2 1.000 - - - no_errors AOX1 HGNC ENSG00000138356 40 0 0 41 8 16.3265 AOX1 0 genome.wustl.edu 37 2 201531430 201531430 + Silent SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 201531430 201531430 C T SNP AOX1 ENST00000374700 human ensembl 74_37 +1 known silent c.3564 p.V1188 0.998 pfam_AldOxase/xan_DH_Mopterin-bd,superfamily_AldOxase/xan_DH_Mopterin-bd,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Aldehyde_oxidase pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Aldehyde_oxidase - no_errors AOX1 HGNC ENSG00000138356 48 0 0 50 9 15.2542 IHH 0 genome.wustl.edu 37 2 219925067 219925067 + Silent SNP T T C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 219925067 219925067 T C SNP IHH ENST00000295731 human ensembl 74_37 -1 known silent c.123 p.P41 1.000 pirsf_Hedgehog,pfam_Hedgehog_signaling_dom pirsf_Hedgehog,pfam_Hedgehog_signaling_dom,pfam_Hint_dom,superfamily_Hedgehog_sig/DD-Pept_Zn-bd_dom,smart_Hint_dom_N,smart_Hint_dom_C,prints_Hedgehog,pfscan_Intein_splice_site - no_errors IHH HGNC ENSG00000163501 97 0 0 57 16 21.9178 DYSF 0 genome.wustl.edu 37 2 71743364 71743364 + Missense_Mutation SNP T T A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 71743364 71743364 T A SNP DYSF ENST00000413539 human ensembl 74_37 +1 known missense c.940 p.F314I 1.000 pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom - no_errors DYSF HGNC ENSG00000135636 40 0 0 39 9 18.75 LOC654342 0 genome.wustl.edu 37 2 91816867 91816867 + RNA SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 91816867 91816867 G A SNP LOC654342 ENST00000608501 human ensembl 74_37 -1 known rna NULL NULL 0.004 - - - no_errors AC027612.6 Clone_based_vega_gene ENSG00000143429 14 0 0 9 6 40 FAM182B 0 genome.wustl.edu 37 20 25848606 25848606 + RNA SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 20 25848606 25848606 G A SNP FAM182B ENST00000424021 human ensembl 74_37 -1 known rna NULL NULL 0.028 - - - no_errors FAM182B HGNC ENSG00000175170 25 0 0 21 4 16 KIF3B 0 genome.wustl.edu 37 20 30897661 30897661 + Silent SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 20 30897661 30897661 G A SNP KIF3B ENST00000375712 human ensembl 74_37 +1 known silent c.81 p.S27 0.000 pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom - no_errors KIF3B HGNC ENSG00000101350 78 0 0 86 18 17.3077 SLC23A2 0 genome.wustl.edu 37 20 4843508 4843508 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 20 4843508 4843508 C T SNP SLC23A2 ENST00000338244 human ensembl 74_37 -1 known missense c.1402 p.A468T 0.116 pfam_Xant/urac/vitC pfam_Xant/urac/vitC - no_errors SLC23A2 HGNC ENSG00000089057 68 0 0 47 35 42.6829 CASS4 0 genome.wustl.edu 37 20 55033575 55033575 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 20 55033575 55033575 G A SNP CASS4 ENST00000360314 human ensembl 74_37 +1 known missense c.2133 p.M711I 0.816 pfam_CAS_DUF3513 pfam_Serine_rich,pfam_CAS_DUF3513,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain - no_errors CASS4 HGNC ENSG00000087589 102 0 0 103 13 11.2069 ADRM1 0 genome.wustl.edu 37 20 60883767 60883767 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 20 60883767 60883767 G A SNP ADRM1 ENST00000253003 human ensembl 74_37 +1 known missense c.1174 p.G392S 1.000 NULL pfam_26S_Psome_Ubiquitin-recp_Rpn13 - no_errors ADRM1 HGNC ENSG00000130706 44 0 0 44 21 32.3077 LAMA5 0 genome.wustl.edu 37 20 60909261 60909261 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 20 60909261 60909261 G A SNP LAMA5 ENST00000252999 human ensembl 74_37 -1 known missense c.2720 p.A907V 0.997 NULL pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg - no_errors LAMA5 HGNC ENSG00000130702 35 0 0 36 23 38.9831 BAGE2 0 genome.wustl.edu 37 21 11038890 11038890 + RNA SNP A A T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 21 11038890 11038890 A T SNP BAGE2 ENST00000470054 human ensembl 74_37 -1 known rna NULL NULL 1.000 - - - no_errors BAGE2 HGNC ENSG00000187172 347 0 0 262 19 6.76157 GOLIM4 0 genome.wustl.edu 37 3 167750460 167750460 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 3 167750460 167750460 C T SNP GOLIM4 ENST00000470487 human ensembl 74_37 -1 known missense c.1024 p.A342T 1.000 NULL NULL - no_errors GOLIM4 HGNC ENSG00000173905 114 0 0 58 25 30.1205 PIK3CA 0 genome.wustl.edu 37 3 178936094 178936094 + Missense_Mutation SNP C C A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 3 178936094 178936094 C A SNP PIK3CA ENST00000263967 human ensembl 74_37 +1 known missense c.1636 p.Q546K 1.000 pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom - no_errors PIK3CA HGNC ENSG00000121879 29 0 0 35 5 12.5 VPS8 0 genome.wustl.edu 37 3 184542473 184542473 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 3 184542473 184542473 C T SNP VPS8 ENST00000287546 human ensembl 74_37 +1 known missense c.53 p.T18M 0.003 NULL superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors VPS8 HGNC ENSG00000156931 47 0 0 29 3 9.375 HESX1 0 genome.wustl.edu 37 3 57232304 57232304 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 3 57232304 57232304 C T SNP HESX1 ENST00000295934 human ensembl 74_37 -1 known missense c.479 p.R160H 1.000 pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom - no_errors HESX1 HGNC ENSG00000163666 43 0 0 32 9 21.9512 KIAA1109 0 genome.wustl.edu 37 4 123176382 123176382 + Missense_Mutation SNP A A G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 4 123176382 123176382 A G SNP KIAA1109 ENST00000264501 human ensembl 74_37 +1 known missense c.6322 p.I2108V 1.000 NULL pfam_Fragile_site-assoc_C - no_errors KIAA1109 HGNC ENSG00000138688 81 0 0 52 18 25.7143 ADAD1 0 genome.wustl.edu 37 4 123336720 123336720 + Missense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 4 123336720 123336720 G T SNP ADAD1 ENST00000296513 human ensembl 74_37 +1 known missense c.1436 p.G479V 1.000 pfam_A_deamin,smart_A_deamin,pfscan_A_deamin pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin - no_errors ADAD1 HGNC ENSG00000164113 114 0 0 77 16 17.2043 SPATA5 0 genome.wustl.edu 37 4 123868603 123868603 + Silent SNP A A G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 4 123868603 123868603 A G SNP SPATA5 ENST00000274008 human ensembl 74_37 +1 known silent c.1674 p.G558 0.631 superfamily_P-loop_NTPase pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase - no_errors SPATA5 HGNC ENSG00000145375 99 0 0 57 23 28.75 RFC1 0 genome.wustl.edu 37 4 39318611 39318611 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 4 39318611 39318611 C T SNP RFC1 ENST00000381897 human ensembl 74_37 -1 known missense c.1127 p.R376H 1.000 superfamily_P-loop_NTPase,pirsf_DNA_replication_fac_C_lsu pfam_DNA_replication_fac_RFC1_C,pfam_BRCT_dom,pfam_ATPase_AAA_core,superfamily_DNA_pol3_clamp-load_cplx_C,superfamily_P-loop_NTPase,superfamily_BRCT_dom,smart_BRCT_dom,smart_AAA+_ATPase,pirsf_DNA_replication_fac_C_lsu,pfscan_BRCT_dom - no_errors RFC1 HGNC ENSG00000035928 36 0 0 33 6 15.3846 EXOC1 0 genome.wustl.edu 37 4 56768601 56768601 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 4 56768601 56768601 G A SNP EXOC1 ENST00000346134 human ensembl 74_37 +1 known missense c.2429 p.R810H 1.000 pfam_Exocyst_Exoc1/SEC3 pfam_Exocyst_Exoc1/SEC3 - no_errors EXOC1 HGNC ENSG00000090989 53 0 0 49 20 28.9855 GRSF1 0 genome.wustl.edu 37 4 71691921 71691921 + Missense_Mutation SNP C C A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 4 71691921 71691921 C A SNP GRSF1 ENST00000254799 human ensembl 74_37 -1 known missense c.1177 p.D393Y 0.974 NULL pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom - no_errors GRSF1 HGNC ENSG00000132463 17 0 0 30 2 6.25 GRID2 0 genome.wustl.edu 37 4 94316852 94316852 + Missense_Mutation SNP C C G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 4 94316852 94316852 C G SNP GRID2 ENST00000282020 human ensembl 74_37 +1 known missense c.1340 p.T447S 1.000 superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt - no_errors GRID2 HGNC ENSG00000152208 73 0 0 50 19 27.5362 STPG2 0 genome.wustl.edu 37 4 99049733 99049733 + Missense_Mutation SNP C C A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 4 99049733 99049733 C A SNP STPG2 ENST00000295268 human ensembl 74_37 -1 known missense c.233 p.R78I 0.155 NULL NULL - no_errors STPG2 HGNC ENSG00000163116 16 0 0 12 3 20 PCDHB10 0 genome.wustl.edu 37 5 140572528 140572528 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 5 140572528 140572528 G A SNP PCDHB10 ENST00000239446 human ensembl 74_37 +1 known missense c.403 p.D135N 0.000 superfamily_Cadherin-like,pfscan_Cadherin pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors PCDHB10 HGNC ENSG00000120324 114 0 0 91 19 17.2727 FAT2 0 genome.wustl.edu 37 5 150945845 150945845 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 5 150945845 150945845 C T SNP FAT2 ENST00000261800 human ensembl 74_37 -1 known missense c.2648 p.R883H 1.000 pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin - no_errors FAT2 HGNC ENSG00000086570 80 0 0 44 21 32.3077 ZNF879 0 genome.wustl.edu 37 5 178454513 178454513 + Missense_Mutation SNP C C A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 5 178454513 178454513 C A SNP ZNF879 ENST00000444149 human ensembl 74_37 +1 known missense c.73 p.Q25K 0.998 pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF879 HGNC ENSG00000234284 46 0 0 22 8 26.6667 ADCY2 0 genome.wustl.edu 37 5 7802364 7802364 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 5 7802364 7802364 G A SNP ADCY2 ENST00000338316 human ensembl 74_37 +1 known missense c.2662 p.V888I 1.000 pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase - no_errors ADCY2 HGNC ENSG00000078295 27 0 0 21 16 43.2432 VCAN 0 genome.wustl.edu 37 5 82808156 82808156 + Missense_Mutation SNP T T A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 5 82808156 82808156 T A SNP VCAN ENST00000265077 human ensembl 74_37 +1 known missense c.983 p.F328Y 1.000 pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link - no_errors VCAN HGNC ENSG00000038427 32 0 0 26 5 16.129 TRAF3IP2 0 genome.wustl.edu 37 6 111913074 111913074 + Missense_Mutation SNP G G C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 6 111913074 111913074 G C SNP TRAF3IP2 ENST00000340026 human ensembl 74_37 -1 known missense c.243 p.H81Q 0.001 NULL pfam_SEFIR - no_errors TRAF3IP2 HGNC ENSG00000056972 93 0 0 77 8 9.41176 SOGA3 0 genome.wustl.edu 37 6 127797234 127797234 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 6 127797234 127797234 C T SNP SOGA3 ENST00000368268 human ensembl 74_37 -1 known missense c.1937 p.R646Q 1.000 pfam_SOGA pfam_SOGA - no_errors SOGA3 HGNC ENSG00000214338 107 0 0 70 14 16.6667 PHACTR2 0 genome.wustl.edu 37 6 144104379 144104379 + Nonsense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 6 144104379 144104379 G T SNP PHACTR2 ENST00000440869 human ensembl 74_37 +1 known nonsense c.1669 p.E557* 1.000 NULL pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat - no_errors PHACTR2 HGNC ENSG00000112419 22 0 0 17 3 15 SYNE1 0 genome.wustl.edu 37 6 152647757 152647757 + Silent SNP A A C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 6 152647757 152647757 A C SNP SYNE1 ENST00000265368 human ensembl 74_37 -1 known silent c.14967 p.T4989 0.753 superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH - no_errors SYNE1 HGNC ENSG00000131018 24 0 0 10 7 41.1765 HLA-V 0 genome.wustl.edu 37 6 29761745 29761745 + RNA SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 6 29761745 29761745 G A SNP HLA-V ENST00000457107 human ensembl 74_37 +1 known rna NULL NULL 0.001 - - - no_errors HLA-V HGNC ENSG00000181126 17 0 0 7 3 30 SNORD117 0 genome.wustl.edu 37 6 31504170 31504170 + RNA SNP T T C TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 6 31504170 31504170 T C SNP SNORD117 ENST00000364915 human ensembl 74_37 -1 known rna NULL NULL 1.000 - - - no_errors SNORD117 HGNC ENSG00000201785 65 0 0 30 14 31.8182 TNXB 0 genome.wustl.edu 37 6 32035600 32035600 + Missense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 6 32035600 32035600 G T SNP TNXB ENST00000375247 human ensembl 74_37 -1 known missense c.6382 p.Q2128K 1.000 pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3 pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3 - no_errors TNXB HGNC ENSG00000168477 117 1 0.847458 57 30 34.4828 ECI2 0 genome.wustl.edu 37 6 4119493 4119493 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 6 4119493 4119493 G A SNP ECI2 ENST00000380118 human ensembl 74_37 -1 known missense c.812 p.P271L 1.000 pfam_Crotonase_core_superfam pfam_Acyl-CoA-binding_protein,pfam_Crotonase_core_superfam,superfamily_Acyl-CoA-binding_protein,prints_Acyl-CoA-binding_protein - no_errors ECI2 HGNC ENSG00000198721 50 0 0 35 16 31.3725 C7orf61 0 genome.wustl.edu 37 7 100061261 100061261 + Missense_Mutation SNP C C G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 7 100061261 100061261 C G SNP C7orf61 ENST00000332375 human ensembl 74_37 -1 known missense c.112 p.D38H 0.003 NULL NULL - no_errors C7orf61 HGNC ENSG00000185955 57 0 0 110 11 9.09091 FBXO24 0 genome.wustl.edu 37 7 100190614 100190614 + Missense_Mutation SNP C C A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 7 100190614 100190614 C A SNP FBXO24 ENST00000427939 human ensembl 74_37 +1 known missense c.881 p.T294N 0.992 NULL pfam_F-box_dom,pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom,pfscan_Reg_chr_condens - no_errors FBXO24 HGNC ENSG00000106336 45 0 0 93 8 7.92079 ZNF282 0 genome.wustl.edu 37 7 148895532 148895532 + Silent SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 7 148895532 148895532 G A SNP ZNF282 ENST00000262085 human ensembl 74_37 +1 known silent c.273 p.L91 1.000 NULL pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF282 HGNC ENSG00000170265 96 0 0 42 20 32.2581 DNAJB6 0 genome.wustl.edu 37 7 157155939 157155939 + Silent SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 7 157155939 157155939 G A SNP DNAJB6 ENST00000262177 human ensembl 74_37 +1 known silent c.150 p.A50 0.197 pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain - no_errors DNAJB6 HGNC ENSG00000105993 32 0 0 20 4 16.6667 FAM188B 0 genome.wustl.edu 37 7 30922556 30922556 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 7 30922556 30922556 G A SNP FAM188B ENST00000265299 human ensembl 74_37 +1 known missense c.2173 p.E725K 0.234 NULL NULL - no_errors FAM188B HGNC ENSG00000106125 291 0 0 237 48 16.8421 NUDCD3 0 genome.wustl.edu 37 7 44431997 44431997 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 7 44431997 44431997 G A SNP NUDCD3 ENST00000355451 human ensembl 74_37 -1 known missense c.874 p.R292C 1.000 superfamily_HSP20-like_chaperone pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom - no_errors NUDCD3 HGNC ENSG00000015676 142 0 0 129 35 21.3415 POM121L12 0 genome.wustl.edu 37 7 53103920 53103920 + Missense_Mutation SNP C C A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 7 53103920 53103920 C A SNP POM121L12 ENST00000408890 human ensembl 74_37 +1 known missense c.556 p.P186T 0.000 NULL NULL - no_errors POM121L12 HGNC ENSG00000221900 93 0 0 70 21 23.0769 GRM3 0 genome.wustl.edu 37 7 86416261 86416261 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 7 86416261 86416261 G A SNP GRM3 ENST00000361669 human ensembl 74_37 +1 known missense c.1153 p.E385K 1.000 pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_GABA_rcpt_B - no_errors GRM3 HGNC ENSG00000198822 115 0 0 94 28 22.9508 ZFAT 0 genome.wustl.edu 37 8 135613822 135613822 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 8 135613822 135613822 C T SNP ZFAT ENST00000377838 human ensembl 74_37 -1 known missense c.2140 p.A714T 0.987 NULL smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZFAT HGNC ENSG00000066827 108 0 0 98 16 14.0351 PLEC 0 genome.wustl.edu 37 8 144998131 144998131 + Missense_Mutation SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 8 144998131 144998131 C T SNP PLEC ENST00000322810 human ensembl 74_37 -1 known missense c.6377 p.R2126H 0.877 NULL pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain - no_errors PLEC HGNC ENSG00000178209 33 0 0 9 14 60.8696 PXDNL 0 genome.wustl.edu 37 8 52321614 52321614 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 8 52321614 52321614 G A SNP PXDNL ENST00000356297 human ensembl 74_37 -1 known missense c.2570 p.A857V 0.064 pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom - no_errors PXDNL HGNC ENSG00000147485 57 0 0 35 11 23.913 SLC10A5 0 genome.wustl.edu 37 8 82606874 82606874 + Missense_Mutation SNP C C G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 8 82606874 82606874 C G SNP SLC10A5 ENST00000518568 human ensembl 74_37 -1 known missense c.334 p.E112Q 0.032 NULL pfam_BilAc/Na_symport - no_errors SLC10A5 HGNC ENSG00000253598 66 0 0 81 11 11.9565 MUSK 0 genome.wustl.edu 37 9 113496549 113496549 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 9 113496549 113496549 G A SNP MUSK ENST00000374448 human ensembl 74_37 +1 known missense c.647 p.R216Q 1.000 pfam_Ig_I-set,pfscan_Ig-like_dom pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Frizzled_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom - no_errors MUSK HGNC ENSG00000030304 37 0 0 32 11 25.5814 CNTLN 0 genome.wustl.edu 37 9 17416105 17416105 + Missense_Mutation SNP A A G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 9 17416105 17416105 A G SNP CNTLN ENST00000380647 human ensembl 74_37 +1 known missense c.3032 p.E1011G 1.000 NULL superfamily_Prefoldin - no_errors CNTLN HGNC ENSG00000044459 65 0 0 51 17 25 SMARCA2 0 genome.wustl.edu 37 9 2054682 2054682 + Missense_Mutation SNP G G T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 9 2054682 2054682 G T SNP SMARCA2 ENST00000349721 human ensembl 74_37 +1 known missense c.1132 p.V378L 0.998 NULL pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,superfamily_RNaseH-like_dom,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain,prints_Bromodomain - no_errors SMARCA2 HGNC ENSG00000080503 88 0 0 56 15 21.1268 PRSS3 0 genome.wustl.edu 37 9 33798632 33798632 + RNA SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 9 33798632 33798632 C T SNP PRSS3 ENST00000495682 human ensembl 74_37 +1 known rna NULL NULL 0.071 - - - no_errors PRSS3 HGNC ENSG00000010438 154 0 0 128 26 16.8831 ANKRD20A4 0 genome.wustl.edu 37 9 69390020 69390020 + Missense_Mutation SNP T T A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 9 69390020 69390020 T A SNP ANKRD20A4 ENST00000357336 human ensembl 74_37 +1 known missense c.574 p.S192T 0.002 superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt - no_errors ANKRD20A4 HGNC ENSG00000172014 10 0 0 2 4 66.6667 TEX13B 0 genome.wustl.edu 37 X 107224569 107224569 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 X 107224569 107224569 G A SNP TEX13B ENST00000302917 human ensembl 74_37 -1 known missense c.680 p.A227V 0.000 NULL NULL - no_errors TEX13B HGNC ENSG00000170925 140 0 0 159 54 25.3521 CNKSR2 0 genome.wustl.edu 37 X 21667117 21667117 + Missense_Mutation SNP G G A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 X 21667117 21667117 G A SNP CNKSR2 ENST00000379510 human ensembl 74_37 +1 known missense c.2861 p.R954Q 1.000 NULL pfam_CNKSR2,pfam_CRIC_domain_Chordata,pfam_SAM_type1,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_PDZ,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_SAM - no_errors CNKSR2 HGNC ENSG00000149970 35 0 0 71 21 22.8261 FAM9B 0 genome.wustl.edu 37 X 8998322 8998322 + Silent SNP C C T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 X 8998322 8998322 C T SNP FAM9B ENST00000327220 human ensembl 74_37 -1 known silent c.261 p.L87 0.035 pfam_Cor1/Xlr/Xmr pfam_Cor1/Xlr/Xmr - no_errors FAM9B HGNC ENSG00000177138 13 0 0 4 3 42.8571 PCDH11X 0 genome.wustl.edu 37 X 91090690 91090690 + Missense_Mutation SNP T T G TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 X 91090690 91090690 T G SNP PCDH11X ENST00000373094 human ensembl 74_37 +1 known missense c.187 p.F63V 1.000 pfam_Cadherin_N,pfscan_Cadherin pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors PCDH11X HGNC ENSG00000102290 57 0 0 43 45 51.1364 MIA3 0 genome.wustl.edu 37 1 222802954 222802955 + Frame_Shift_Del DEL GG GG - TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 GG GG Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 1 222802954 222802955 GG - DEL MIA3 ENST00000344441 human ensembl 74_37 +1 known frame_shift_del c.2392_2393 p.V799fs 0.035:0.027 NULL pfam_SH3_2,superfamily_SH3_domain - no_errors MIA3 HGNC ENSG00000154305 53 0 0 60 12 16.6667 TM9SF2 0 genome.wustl.edu 37 13 100192901 100192902 + RNA INS - - T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 13 100192901 100192902 - T INS TM9SF2 ENST00000466555 human ensembl 74_37 +1 known rna NULL NULL 0.173:0.045 - - - no_errors TM9SF2 HGNC ENSG00000125304 19 0 0 24 9 27.2727 COQ9 0 genome.wustl.edu 37 16 57481420 57481422 + In_Frame_Del DEL GGC GGC - TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 GGC GGC Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 16 57481420 57481422 GGC - DEL COQ9 ENST00000262507 human ensembl 74_37 +1 known in_frame_del c.3_5 p.A5in_frame_del 1.000:1.000:1.000 NULL pfam_COQ9,superfamily_Homeodomain-like,tigrfam_Ubiq_biosynth_COQ9 - no_errors COQ9 HGNC ENSG00000088682 13 0 0 4 2 33.3333 TP53 0 genome.wustl.edu 37 17 7579442 7579442 + Frame_Shift_Del DEL G G - TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 17 7579442 7579442 G - DEL TP53 ENST00000269305 human ensembl 74_37 -1 known frame_shift_del c.245 p.P82fs 0.000 NULL pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor - no_errors TP53 HGNC ENSG00000141510 178 0 0 79 80 50.3145 SCN7A 0 genome.wustl.edu 37 2 167322420 167322421 + Frame_Shift_Ins INS - - A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 2 167322420 167322421 - A INS SCN7A ENST00000409855 human ensembl 74_37 -1 known frame_shift_ins c.742_741 p.L247fs 1.000:1.000 pfam_Ion_trans_dom pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu - no_errors SCN7A HGNC ENSG00000136546 35 0 0 21 10 32.2581 RBM6 0 genome.wustl.edu 37 3 50004793 50004794 + RNA INS - - A TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 3 50004793 50004794 - A INS RBM6 ENST00000488807 human ensembl 74_37 +1 putative rna NULL NULL 1.000:1.000 - - - no_errors RBM6 HGNC ENSG00000004534 22 0 0 15 3 16.6667 PCLO 0 genome.wustl.edu 37 7 82595405 82595406 + Frame_Shift_Ins INS - - T TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 7 82595405 82595406 - T INS PCLO ENST00000333891 human ensembl 74_37 -1 known frame_shift_ins c.3699_3698 p.P1234fs 0.009:0.006 NULL pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ - no_errors PCLO HGNC ENSG00000186472 233 0 0 233 36 13.3829 RNF122 0 genome.wustl.edu 37 8 33416169 33416182 + Frame_Shift_Del DEL AAGACAAAGATGCC AAGACAAAGATGCC - TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 AAGACAAAGATGCC AAGACAAAGATGCC Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 8 33416169 33416182 AAGACAAAGATGCC - DEL RNF122 ENST00000256257 human ensembl 74_37 -1 known frame_shift_del c.146_133 p.G45fs 1.000:1.000:1.000:1.000:1.000:0.968:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000 NULL pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING - no_errors RNF122 HGNC ENSG00000133874 71 0 0 38 14 26.9231 LOC100996870 0 genome.wustl.edu 37 9 66466800 66466800 + RNA DEL G G - TCGA-BR-A4PF-01A-11D-A25D-08 TCGA-BR-A4PF-10A-01D-A25E-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 25c76e84-85ce-4f2a-b6af-cd7c54621eac 76a41921-d5cb-4385-9294-760aeeae29c2 9 66466800 66466800 G - DEL LOC100996870 ENST00000424345 human ensembl 74_37 +1 known rna NULL NULL 0.134 - - - no_errors RP11-262H14.1 Clone_based_vega_gene ENSG00000238113 16 0 0 15 3 16.6667