Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error default_gene_name gene_name_source ensembl_gene_id tier title header normal_ref_reads normal_var_reads normal_VAF tumor_ref_reads tumor_var_reads tumor_VAF ADCY10 0 genome.wustl.edu 37 1 167839531 167839531 + Missense_Mutation SNP A A G TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 1 167839531 167839531 A G SNP ADCY10 ENST00000367851 human ensembl 74_37 -1 known missense c.1580 p.M527T 0.003 superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10 pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase - no_errors ADCY10 HGNC ENSG00000143199 28 0 0 50 5 9.09091 AGO1 0 genome.wustl.edu 37 1 36359356 36359356 + Silent SNP C C T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 1 36359356 36359356 C T SNP AGO1 ENST00000373204 human ensembl 74_37 +1 known silent c.594 p.F198 1.000 pfam_DUF1785,superfamily_PAZ_dom pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi - no_errors AGO1 HGNC ENSG00000092847 55 0 0 79 5 5.95238 DNMBP 0 genome.wustl.edu 37 10 101716054 101716054 + Missense_Mutation SNP C C T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 10 101716054 101716054 C T SNP DNMBP ENST00000342239 human ensembl 74_37 -1 known missense c.1177 p.E393K 0.003 NULL pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_BAR_dom,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain,prints_p67phox,prints_Spectrin_alpha_SH3 - no_errors DNMBP HGNC ENSG00000107554 67 0 0 125 10 7.40741 CCDC3 0 genome.wustl.edu 37 10 12940586 12940586 + Missense_Mutation SNP G G A TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 10 12940586 12940586 G A SNP CCDC3 ENST00000378825 human ensembl 74_37 -1 known missense c.643 p.R215W 0.856 NULL NULL - no_errors CCDC3 HGNC ENSG00000151468 86 0 0 158 13 7.60234 LYZL1 0 genome.wustl.edu 37 10 29581519 29581519 + Missense_Mutation SNP G G A TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 10 29581519 29581519 G A SNP LYZL1 ENST00000375500 human ensembl 74_37 +1 known missense c.349 p.D117N 0.938 pfam_Glyco_hydro_22,superfamily_Lysozyme-like_dom,smart_Glyco_hydro_22,prints_Glyco_hydro_22 pfam_Glyco_hydro_22,superfamily_Lysozyme-like_dom,smart_Glyco_hydro_22,prints_Glyco_hydro_22,prints_Glyco_hydro_22_lys - no_errors LYZL1 HGNC ENSG00000120563 48 0 0 82 7 7.86517 TPTE2P6 0 genome.wustl.edu 37 13 25161397 25161397 + RNA SNP C C G TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 13 25161397 25161397 C G SNP TPTE2P6 ENST00000440905 human ensembl 74_37 +1 known rna NULL NULL 0.019 - - - no_errors TPTE2P6 HGNC ENSG00000205822 19 0 0 50 3 5.66038 ZFYVE26 0 genome.wustl.edu 37 14 68222803 68222803 + Silent SNP C C T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 14 68222803 68222803 C T SNP ZFYVE26 ENST00000347230 human ensembl 74_37 -1 known silent c.6648 p.K2216 1.000 NULL pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel - no_errors ZFYVE26 HGNC ENSG00000072121 225 0 0 502 28 5.28302 UNC79 0 genome.wustl.edu 37 14 94008977 94008977 + Missense_Mutation SNP G G A TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 14 94008977 94008977 G A SNP UNC79 ENST00000553484 human ensembl 74_37 +1 known missense c.1690 p.V564I 1.000 NULL superfamily_P-loop_NTPase,superfamily_ARM-type_fold - no_errors UNC79 HGNC ENSG00000133958 90 0 0 150 12 7.40741 HERC2P4 0 genome.wustl.edu 37 16 32190787 32190787 + RNA SNP T T C TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 16 32190787 32190787 T C SNP HERC2P4 ENST00000566591 human ensembl 74_37 -1 known rna NULL NULL 0.879 - - - no_errors HERC2P4 HGNC ENSG00000230267 11 0 0 21 7 25 CDH1 0 genome.wustl.edu 37 16 68844154 68844154 + Missense_Mutation SNP A A T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 16 68844154 68844154 A T SNP CDH1 ENST00000261769 human ensembl 74_37 +1 known missense c.742 p.I248F 1.000 pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors CDH1 HGNC ENSG00000039068 77 0 0 175 13 6.91489 KRTAP4-11 0 genome.wustl.edu 37 17 39274087 39274087 + Missense_Mutation SNP G G C TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 17 39274087 39274087 G C SNP KRTAP4-11 ENST00000391413 human ensembl 74_37 -1 known missense c.481 p.L161V 0.005 NULL pfam_Keratin-assoc - no_errors KRTAP4-11 HGNC ENSG00000212721 16 0 0 24 3 11.1111 DGKE 0 genome.wustl.edu 37 17 54933909 54933909 + Missense_Mutation SNP G G A TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 17 54933909 54933909 G A SNP DGKE ENST00000284061 human ensembl 74_37 +1 known missense c.1135 p.D379N 1.000 pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_Prot_Kinase_C-like_PE/DAG-bd - no_errors DGKE HGNC ENSG00000153933 15 0 0 29 2 6.45161 ICAM5 0 genome.wustl.edu 37 19 10403881 10403881 + Missense_Mutation SNP A A T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 19 10403881 10403881 A T SNP ICAM5 ENST00000221980 human ensembl 74_37 +1 known missense c.1424 p.D475V 0.000 smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom pfam_Ig_I-set,pfam_ICAM_N,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom,prints_ICAM_VCAM_N,prints_ICAM - no_errors ICAM5 HGNC ENSG00000105376 82 0 0 109 7 6.03448 ZNF536 0 genome.wustl.edu 37 19 31039733 31039733 + Silent SNP C C A TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 19 31039733 31039733 C A SNP ZNF536 ENST00000355537 human ensembl 74_37 +1 known silent c.3207 p.I1069 0.000 NULL pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF536 HGNC ENSG00000198597 65 0 0 84 6 6.66667 FCGBP 0 genome.wustl.edu 37 19 40370213 40370213 + Silent SNP G G A TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 19 40370213 40370213 G A SNP FCGBP ENST00000221347 human ensembl 74_37 -1 known silent c.12453 p.D4151 0.059 pfam_VWF_type-D,smart_VWF_type-D pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out - no_errors FCGBP HGNC ENSG00000090920 19 0 0 26 18 40.9091 LRRC8E 0 genome.wustl.edu 37 19 7965138 7965138 + Silent SNP C C T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 19 7965138 7965138 C T SNP LRRC8E ENST00000306708 human ensembl 74_37 +1 known silent c.1731 p.S577 1.000 NULL pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp - no_errors LRRC8E HGNC ENSG00000171017 48 0 0 81 5 5.81395 SCN7A 0 genome.wustl.edu 37 2 167330357 167330357 + Missense_Mutation SNP C C T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 2 167330357 167330357 C T SNP SCN7A ENST00000409855 human ensembl 74_37 -1 known missense c.395 p.C132Y 0.074 NULL pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu - no_errors SCN7A HGNC ENSG00000136546 19 0 0 24 2 7.69231 DYSF 0 genome.wustl.edu 37 2 71797446 71797446 + Missense_Mutation SNP C C T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 2 71797446 71797446 C T SNP DYSF ENST00000413539 human ensembl 74_37 +1 known missense c.3106 p.R1036W 0.997 NULL pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom - no_errors DYSF HGNC ENSG00000135636 41 0 0 65 6 8.4507 RMND5A 0 genome.wustl.edu 37 2 86998770 86998770 + Silent SNP C C T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 2 86998770 86998770 C T SNP RMND5A ENST00000283632 human ensembl 74_37 +1 known silent c.1047 p.P349 1.000 NULL smart_LisH_dimerisation,smart_CTLH_C,smart_CRA_dom,pfscan_LisH_dimerisation,pfscan_CTLH_C - no_errors RMND5A HGNC ENSG00000153561 52 0 0 74 7 8.64198 FRG1 0 genome.wustl.edu 37 4 190874255 190874255 + Missense_Mutation SNP A A T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 4 190874255 190874255 A T SNP FRG1 ENST00000226798 human ensembl 74_37 +1 known missense c.292 p.T98S 1.000 pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking - no_errors FRG1 HGNC ENSG00000109536 13 0 0 21 6 22.2222 GABRB1 0 genome.wustl.edu 37 4 47427792 47427792 + Missense_Mutation SNP G G A TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 4 47427792 47427792 G A SNP GABRB1 ENST00000295454 human ensembl 74_37 +1 known missense c.1182 p.M394I 1.000 pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel - no_errors GABRB1 HGNC ENSG00000163288 78 0 0 131 7 5.07246 FAT2 0 genome.wustl.edu 37 5 150901071 150901071 + Missense_Mutation SNP C C T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 5 150901071 150901071 C T SNP FAT2 ENST00000261800 human ensembl 74_37 -1 known missense c.11083 p.E3695K 0.026 NULL pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin - no_errors FAT2 HGNC ENSG00000086570 46 0 0 86 9 9.47368 RFX6 0 genome.wustl.edu 37 6 117246619 117246619 + Missense_Mutation SNP C C T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 6 117246619 117246619 C T SNP RFX6 ENST00000332958 human ensembl 74_37 +1 known missense c.1682 p.A561V 1.000 NULL pfam_DNA-bd_RFX - no_errors RFX6 HGNC ENSG00000185002 69 0 0 139 8 5.44218 TBP 0 genome.wustl.edu 37 6 170873698 170873698 + Missense_Mutation SNP G G A TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 6 170873698 170873698 G A SNP TBP ENST00000230354 human ensembl 74_37 +1 known missense c.563 p.R188Q 1.000 pfam_TBP pfam_TBP,prints_TBP - no_errors TBP HGNC ENSG00000112592 31 0 0 46 4 8 IRF4 0 genome.wustl.edu 37 6 398916 398916 + Silent SNP C C T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 6 398916 398916 C T SNP IRF4 ENST00000380956 human ensembl 74_37 +1 known silent c.726 p.A242 0.912 NULL pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom - no_errors IRF4 HGNC ENSG00000137265 19 0 0 37 3 7.5 TMEM168 0 genome.wustl.edu 37 7 112424364 112424364 + Silent SNP A A G TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 7 112424364 112424364 A G SNP TMEM168 ENST00000312814 human ensembl 74_37 -1 known silent c.517 p.L173 1.000 NULL superfamily_ConA-like_lec_gl_sf - no_errors TMEM168 HGNC ENSG00000146802 32 0 0 45 5 10 DEFB107A 0 genome.wustl.edu 37 8 7673126 7673126 + Missense_Mutation SNP C C A TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 8 7673126 7673126 C A SNP DEFB107A ENST00000335021 human ensembl 74_37 -1 known missense c.25 p.V9F 0.013 NULL NULL - no_errors DEFB107A HGNC ENSG00000186572 8 0 0 7 5 41.6667 PIGR 0 genome.wustl.edu 37 1 207109129 207109130 + Frame_Shift_Ins INS - - T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 1 207109129 207109130 - T INS PIGR ENST00000356495 human ensembl 74_37 -1 known frame_shift_ins c.1080_1079 p.V362fs 0.998:1.000 pfam_Ig_V-set,smart_Ig_sub pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom - no_errors PIGR HGNC ENSG00000162896 23 0 0 74 9 10.8434 IRF9 0 genome.wustl.edu 37 14 24633132 24633134 + In_Frame_Del DEL AGC AGC - TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 AGC AGC Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 14 24633132 24633134 AGC - DEL IRF9 ENST00000396864 human ensembl 74_37 +1 known in_frame_del c.541_543 p.S184in_frame_del 0.064:0.076:0.081 NULL pfam_Interferon_reg_fact_DNA-bd_dom,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom - no_errors IRF9 HGNC ENSG00000213928 73 0 0 119 8 6.29921 PLG 0 genome.wustl.edu 37 6 161134305 161134306 + RNA INS - - T TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 6 161134305 161134306 - T INS PLG ENST00000462918 human ensembl 74_37 +1 known rna NULL NULL 0.002:0.003 - - - no_errors PLG HGNC ENSG00000122194 8 0 0 7 4 36.3636 PRRC2A 0 genome.wustl.edu 37 6 31597456 31597457 + Frame_Shift_Ins INS - - C TCGA-BR-A44T-01A-32D-A24D-08 TCGA-BR-A44T-10A-01D-A24F-08 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 37ce42ea-840a-4163-b78f-c911a0d95839 e741ed6d-93bc-4a36-b2b4-6e9368ef4455 6 31597456 31597457 - C INS PRRC2A ENST00000376007 human ensembl 74_37 +1 known frame_shift_ins c.2088_2089 p.P698fs 0.011:0.420 NULL pfam_BAT2_N - no_errors PRRC2A HGNC ENSG00000204469 30 0 0 83 8 8.79121