Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error default_gene_name gene_name_source ensembl_gene_id tier title header normal_ref_reads normal_var_reads normal_VAF tumor_ref_reads tumor_var_reads tumor_VAF VANGL1 0 genome.wustl.edu 37 1 116226631 116226631 + Nonsense_Mutation SNP C C A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 116226631 116226631 C A SNP VANGL1 ENST00000310260 human ensembl 74_37 +1 known nonsense c.1013 p.S338* 0.975 pfam_Strabismus,pirsf_Strabismus pfam_Strabismus,pirsf_Strabismus - no_errors VANGL1 HGNC ENSG00000173218 134 0 0 38 13 25.4902 ATAD3B 0 genome.wustl.edu 37 1 1423286 1423286 + Missense_Mutation SNP C C G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 1423286 1423286 C G SNP ATAD3B ENST00000308647 human ensembl 74_37 +1 known missense c.1258 p.R420G 1.000 pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase pfam_DUF3523,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase - no_errors ATAD3B HGNC ENSG00000160072 292 0 0 77 12 13.4831 CELA2B 0 genome.wustl.edu 37 1 15813901 15813901 + Missense_Mutation SNP G G A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 15813901 15813901 G A SNP CELA2B ENST00000375910 human ensembl 74_37 +1 known missense c.761 p.R254Q 0.997 pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1 pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A - no_errors CELA2B HGNC ENSG00000215704 317 0 0 101 6 5.60748 CROCCP2 0 genome.wustl.edu 37 1 16959834 16959834 + RNA SNP G G T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 16959834 16959834 G T SNP CROCCP2 ENST00000412962 human ensembl 74_37 -1 known rna NULL NULL 0.981 - - - no_errors CROCCP2 HGNC ENSG00000215908 23 0 0 1 3 75 LRRN2 0 genome.wustl.edu 37 1 204588700 204588700 + Missense_Mutation SNP C C G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 204588700 204588700 C G SNP LRRN2 ENST00000367175 human ensembl 74_37 -1 known missense c.421 p.A141P 1.000 smart_Leu-rich_rpt_typical-subtyp pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom - no_errors LRRN2 HGNC ENSG00000170382 370 0 0 81 29 26.3636 PTPN14 0 genome.wustl.edu 37 1 214557344 214557344 + Silent SNP A A G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 214557344 214557344 A G SNP PTPN14 ENST00000366956 human ensembl 74_37 -1 known silent c.1854 p.H618 0.948 pirsf_Tyr_Pase_non-rcpt_typ-14/21 pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam - no_errors PTPN14 HGNC ENSG00000152104 111 0 0 44 4 8.33333 HMGN2 0 genome.wustl.edu 37 1 26801762 26801762 + RNA SNP G G T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 26801762 26801762 G T SNP HMGN2 ENST00000460563 human ensembl 74_37 +1 known rna NULL NULL 1.000 - - - no_errors HMGN2 HGNC ENSG00000198830 14 0 0 10 4 28.5714 XKR8 0 genome.wustl.edu 37 1 28293529 28293529 + Missense_Mutation SNP G G T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 28293529 28293529 G T SNP XKR8 ENST00000373884 human ensembl 74_37 +1 known missense c.1006 p.V336L 0.000 pfam_Transport_prot_XK pfam_Transport_prot_XK - no_errors XKR8 HGNC ENSG00000158156 142 1 0.699301 44 6 12 DNALI1 0 genome.wustl.edu 37 1 38030780 38030780 + RNA SNP C C A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 38030780 38030780 C A SNP DNALI1 ENST00000497858 human ensembl 74_37 +1 known rna NULL NULL 0.768 - - - no_errors DNALI1 HGNC ENSG00000163879 26 0 0 18 8 30.7692 SNX7 0 genome.wustl.edu 37 1 99164434 99164434 + Silent SNP G G A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 99164434 99164434 G A SNP SNX7 ENST00000306121 human ensembl 74_37 +1 known silent c.1011 p.E337 1.000 NULL pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox - no_errors SNX7 HGNC ENSG00000162627 103 0 0 51 5 8.92857 USP2 0 genome.wustl.edu 37 11 119244095 119244095 + Silent SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 11 119244095 119244095 C T SNP USP2 ENST00000260187 human ensembl 74_37 -1 known silent c.96 p.P32 0.534 NULL pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67 - no_errors USP2 HGNC ENSG00000036672 108 0 0 33 4 10.8108 PHF21A 0 genome.wustl.edu 37 11 45986887 45986887 + Missense_Mutation SNP G G T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 11 45986887 45986887 G T SNP PHF21A ENST00000257821 human ensembl 74_37 -1 known missense c.975 p.S325R 1.000 NULL pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger - no_errors PHF21A HGNC ENSG00000135365 46 0 0 16 6 27.2727 MS4A12 0 genome.wustl.edu 37 11 60274543 60274543 + Silent SNP G G A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 11 60274543 60274543 G A SNP MS4A12 ENST00000016913 human ensembl 74_37 +1 known silent c.750 p.A250 0.000 NULL pfam_CD20-like - no_errors MS4A12 HGNC ENSG00000071203 169 0 0 66 7 9.58904 PLA2G1B 0 genome.wustl.edu 37 12 120763699 120763699 + Missense_Mutation SNP C C A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 12 120763699 120763699 C A SNP PLA2G1B ENST00000308366 human ensembl 74_37 -1 known missense c.159 p.L53F 0.998 pfam_PLipase_A2_dom,superfamily_PLipase_A2_dom,smart_PLipase_A2_dom,prints_PLipase_A2 pfam_PLipase_A2_dom,superfamily_PLipase_A2_dom,smart_PLipase_A2_dom,prints_PLipase_A2 - no_errors PLA2G1B HGNC ENSG00000170890 322 1 0.309598 95 27 22.1311 RIMBP2 0 genome.wustl.edu 37 12 130919389 130919389 + Missense_Mutation SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 12 130919389 130919389 C T SNP RIMBP2 ENST00000261655 human ensembl 74_37 -1 known missense c.2092 p.A698T 0.000 NULL pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain - no_errors RIMBP2 HGNC ENSG00000060709 209 0 0 72 6 7.69231 KRT75 0 genome.wustl.edu 37 12 52822136 52822136 + Missense_Mutation SNP C C G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 12 52822136 52822136 C G SNP KRT75 ENST00000252245 human ensembl 74_37 -1 known missense c.1286 p.R429P 0.997 pfam_IF pfam_IF,superfamily_Prefoldin,prints_Keratin_II - no_errors KRT75 HGNC ENSG00000170454 143 0 0 18 30 62.5 STAT6 0 genome.wustl.edu 37 12 57500552 57500552 + Missense_Mutation SNP C C A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 12 57500552 57500552 C A SNP STAT6 ENST00000300134 human ensembl 74_37 -1 known missense c.402 p.L134F 0.004 pfam_STAT_TF_alpha,superfamily_STAT_TF_coiled-coil pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2 - no_errors STAT6 HGNC ENSG00000166888 184 1 0.540541 62 12 16.2162 CDK4 0 genome.wustl.edu 37 12 58144455 58144455 + Splice_Site SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 12 58144455 58144455 C T SNP CDK4 ENST00000312990 human ensembl 74_37 -1 known splice_site c.265-1 e3-1 1.000 - - - no_errors CDK4 HGNC ENSG00000135446 244 0 0 70 4 5.40541 PTMS 0 genome.wustl.edu 37 12 6879593 6879593 + Missense_Mutation SNP T T G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 12 6879593 6879593 T G SNP PTMS ENST00000309083 human ensembl 74_37 +1 known missense c.294 p.N98K 0.992 pfam_Pro/parathymosin pfam_Pro/parathymosin - no_errors PTMS HGNC ENSG00000159335 229 0 0 60 5 7.69231 BEST3 0 genome.wustl.edu 37 12 70049306 70049306 + Missense_Mutation SNP T T G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 12 70049306 70049306 T G SNP BEST3 ENST00000330891 human ensembl 74_37 -1 known missense c.1388 p.H463P 0.010 NULL pfam_Bestrophin/UPF0187 - no_errors BEST3 HGNC ENSG00000127325 176 0 0 75 5 6.25 NECAP1 0 genome.wustl.edu 37 12 8245589 8245589 + Missense_Mutation SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 12 8245589 8245589 C T SNP NECAP1 ENST00000339754 human ensembl 74_37 +1 known missense c.614 p.A205V 1.000 NULL pfam_NECAP-1 - no_errors NECAP1 HGNC ENSG00000089818 457 0 0 171 18 9.52381 ELK3 0 genome.wustl.edu 37 12 96641300 96641300 + Missense_Mutation SNP G G C TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 12 96641300 96641300 G C SNP ELK3 ENST00000228741 human ensembl 74_37 +1 known missense c.790 p.A264P 0.998 NULL pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom - no_errors ELK3 HGNC ENSG00000111145 223 0 0 97 15 13.3929 ATP8A2 0 genome.wustl.edu 37 13 26343262 26343262 + Silent SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 13 26343262 26343262 C T SNP ATP8A2 ENST00000381655 human ensembl 74_37 +1 known silent c.2463 p.D821 0.761 superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase - no_errors ATP8A2 HGNC ENSG00000132932 176 0 0 72 5 6.49351 MYLK3 0 genome.wustl.edu 37 16 46744687 46744687 + Missense_Mutation SNP G G A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 16 46744687 46744687 G A SNP MYLK3 ENST00000394809 human ensembl 74_37 -1 known missense c.2129 p.S710F 1.000 pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom - no_errors MYLK3 HGNC ENSG00000140795 366 1 0.27248 118 17 12.5926 FTO 0 genome.wustl.edu 37 16 53860211 53860211 + Missense_Mutation SNP G G C TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 16 53860211 53860211 G C SNP FTO ENST00000471389 human ensembl 74_37 +1 known missense c.559 p.G187R 0.000 NULL NULL - no_errors FTO HGNC ENSG00000140718 149 0 0 96 6 5.88235 CDH3 0 genome.wustl.edu 37 16 68718494 68718494 + Missense_Mutation SNP T T A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 16 68718494 68718494 T A SNP CDH3 ENST00000264012 human ensembl 74_37 +1 known missense c.1191 p.D397E 1.000 pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors CDH3 HGNC ENSG00000062038 711 0 0 310 21 6.34441 ABCA7 0 genome.wustl.edu 37 19 1042792 1042792 + Silent SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 19 1042792 1042792 C T SNP ABCA7 ENST00000263094 human ensembl 74_37 +1 known silent c.546 p.S182 0.011 NULL pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like - no_errors ABCA7 HGNC ENSG00000064687 175 0 0 79 6 7.05882 NWD1 0 genome.wustl.edu 37 19 16860087 16860087 + Missense_Mutation SNP G G C TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 19 16860087 16860087 G C SNP NWD1 ENST00000379808 human ensembl 74_37 +1 known missense c.634 p.A212P 0.000 NULL pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors NWD1 HGNC ENSG00000188039 208 1 0.478469 40 27 40.2985 GDF15 0 genome.wustl.edu 37 19 18499106 18499106 + Silent SNP A A G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 19 18499106 18499106 A G SNP GDF15 ENST00000252809 human ensembl 74_37 +1 known silent c.288 p.G96 0.000 NULL pfam_TGF-b_C,smart_TGF-b_C - no_errors GDF15 HGNC ENSG00000130513 90 0 0 30 8 21.0526 NPHS1 0 genome.wustl.edu 37 19 36336437 36336437 + Missense_Mutation SNP T T C TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 19 36336437 36336437 T C SNP NPHS1 ENST00000378910 human ensembl 74_37 -1 known missense c.1763 p.E588G 0.908 pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom pfam_CD80_C2-set,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom - no_errors NPHS1 HGNC ENSG00000161270 56 0 0 11 5 31.25 CRX 0 genome.wustl.edu 37 19 48342758 48342758 + Missense_Mutation SNP C C A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 19 48342758 48342758 C A SNP CRX ENST00000221996 human ensembl 74_37 +1 known missense c.434 p.P145H 0.011 NULL pfam_Homeobox_dom,pfam_Otx_TF_C,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom - no_errors CRX HGNC ENSG00000105392 230 0 0 83 6 6.74157 TMC4 0 genome.wustl.edu 37 19 54676754 54676754 + Missense_Mutation SNP G G C TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 19 54676754 54676754 G C SNP TMC4 ENST00000301187 human ensembl 74_37 -1 known missense c.59 p.A20G 0.989 NULL pfam_TMC - no_errors TMC4 HGNC ENSG00000167608 471 1 0.211864 169 15 8.15217 ZEB2 0 genome.wustl.edu 37 2 145274869 145274869 + Missense_Mutation SNP G G T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 2 145274869 145274869 G T SNP ZEB2 ENST00000303660 human ensembl 74_37 -1 known missense c.49 p.Q17K 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors ZEB2 HGNC ENSG00000169554 179 1 0.555556 65 6 8.4507 SCAF4 0 genome.wustl.edu 37 21 33065669 33065669 + Missense_Mutation SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 21 33065669 33065669 C T SNP SCAF4 ENST00000286835 human ensembl 74_37 -1 known missense c.1451 p.R484Q 1.000 NULL pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom - no_errors SCAF4 HGNC ENSG00000156304 113 0 0 58 4 6.45161 U2AF1 0 genome.wustl.edu 37 21 44524474 44524474 + Missense_Mutation SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 21 44524474 44524474 C T SNP U2AF1 ENST00000291552 human ensembl 74_37 -1 known missense c.83 p.R28H 1.000 pfam_Znf_CCCH,smart_Znf_CCCH,prints_U2_small pfam_Znf_CCCH,pfam_RRM_dom,smart_Znf_CCCH,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_U2_small - no_errors U2AF1 HGNC ENSG00000160201 96 0 0 36 4 10 CECR2 0 genome.wustl.edu 37 22 17982144 17982144 + Silent SNP C C G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 22 17982144 17982144 C G SNP CECR2 ENST00000400573 human ensembl 74_37 +1 novel silent c.615 p.S205 0.928 NULL pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain - no_errors CECR2 HGNC ENSG00000099954 34 0 0 5 6 54.5455 APOBEC3H 0 genome.wustl.edu 37 22 39498015 39498015 + Missense_Mutation SNP C C G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 22 39498015 39498015 C G SNP APOBEC3H ENST00000442487 human ensembl 74_37 +1 known missense c.511 p.R171G 0.000 pfam_APOBEC_C pfam_APOBEC_N,pfam_APOBEC_C,pfam_CMP_dCMP_Zn-bd,superfamily_Cytidine_deaminase-like - no_errors APOBEC3H HGNC ENSG00000100298 130 1 0.763359 37 15 28.8462 CNTN6 0 genome.wustl.edu 37 3 1427322 1427322 + Missense_Mutation SNP G G A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 3 1427322 1427322 G A SNP CNTN6 ENST00000350110 human ensembl 74_37 +1 known missense c.2545 p.E849K 0.909 pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3 pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom - no_errors CNTN6 HGNC ENSG00000134115 197 0 0 91 9 9 PAK2 0 genome.wustl.edu 37 3 196534697 196534697 + Silent SNP T T C TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 3 196534697 196534697 T C SNP PAK2 ENST00000327134 human ensembl 74_37 +1 known silent c.621 p.G207 0.999 NULL pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CRIB_dom,superfamily_Kinase-like_dom,superfamily_WASP_C,smart_CRIB_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRIB_dom,pfscan_Prot_kinase_dom - no_errors PAK2 HGNC ENSG00000180370 143 0 0 80 6 6.97674 SNRK 0 genome.wustl.edu 37 3 43389767 43389767 + Missense_Mutation SNP G G T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 3 43389767 43389767 G T SNP SNRK ENST00000296088 human ensembl 74_37 +1 known missense c.2016 p.L672F 0.198 NULL pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom - no_errors SNRK HGNC ENSG00000163788 184 0 0 49 10 16.9492 FAM212A 0 genome.wustl.edu 37 3 49842272 49842272 + Missense_Mutation SNP G G A TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 3 49842272 49842272 G A SNP FAM212A ENST00000333323 human ensembl 74_37 +1 known missense c.716 p.R239K 1.000 NULL NULL - no_errors FAM212A HGNC ENSG00000185614 302 0 0 48 34 41.4634 RBM6 0 genome.wustl.edu 37 3 50103862 50103862 + Missense_Mutation SNP G G T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 3 50103862 50103862 G T SNP RBM6 ENST00000266022 human ensembl 74_37 +1 known missense c.2870 p.C957F 1.000 NULL pfam_G_patch_dom,smart_RRM_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_RRM_dom - no_errors RBM6 HGNC ENSG00000004534 405 1 0.246305 123 10 7.5188 BAP1 0 genome.wustl.edu 37 3 52440318 52440318 + Missense_Mutation SNP A A G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 3 52440318 52440318 A G SNP BAP1 ENST00000460680 human ensembl 74_37 -1 known missense c.734 p.L245P 1.000 NULL pfam_Peptidase_C12,prints_Peptidase_C12 - no_errors BAP1 HGNC ENSG00000163930 116 0 0 42 7 14.2857 SNX18 0 genome.wustl.edu 37 5 53815333 53815333 + Silent SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 5 53815333 53815333 C T SNP SNX18 ENST00000326277 human ensembl 74_37 +1 known silent c.1551 p.P517 0.004 pfam_Sorting_nexin_WASP-bd-dom,pirsf_Snx9 pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain - no_errors SNX18 HGNC ENSG00000178996 217 1 0.458716 87 9 9.375 CAP2 0 genome.wustl.edu 37 6 17421835 17421835 + Missense_Mutation SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 6 17421835 17421835 C T SNP CAP2 ENST00000229922 human ensembl 74_37 +1 known missense c.49 p.R17C 0.995 pfam_Adenylate_cyclase-assoc_CAP_N pfam_Adenylate_cyclase-assoc_CAP_N,pfam_Adenylate_cyclase-assoc_CAP_C,superfamily_Adenylate_cyclase-assoc_CAP_N,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif - no_errors CAP2 HGNC ENSG00000112186 227 0 0 85 10 10.5263 VWA7 0 genome.wustl.edu 37 6 31733787 31733787 + Missense_Mutation SNP T T C TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 6 31733787 31733787 T C SNP VWA7 ENST00000375686 human ensembl 74_37 -1 known missense c.2372 p.E791G 1.000 NULL NULL - no_errors VWA7 HGNC ENSG00000204396 455 1 0.219298 144 22 13.253 KHDRBS2 0 genome.wustl.edu 37 6 62407141 62407141 + Missense_Mutation SNP T T C TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 6 62407141 62407141 T C SNP KHDRBS2 ENST00000281156 human ensembl 74_37 -1 known missense c.911 p.D304G 1.000 NULL pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1 - no_errors KHDRBS2 HGNC ENSG00000112232 112 0 0 52 5 8.77193 BAI3 0 genome.wustl.edu 37 6 70071099 70071099 + Missense_Mutation SNP C C G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 6 70071099 70071099 C G SNP BAI3 ENST00000370598 human ensembl 74_37 +1 known missense c.3934 p.P1312A 1.000 NULL pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like - no_errors BAI3 HGNC ENSG00000135298 100 0 0 55 4 6.77966 RIMS2 0 genome.wustl.edu 37 8 104898306 104898306 + Silent SNP T T G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 8 104898306 104898306 T G SNP RIMS2 ENST00000406091 human ensembl 74_37 +1 known silent c.1479 p.P493 0.995 NULL pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel - no_errors RIMS2 HGNC ENSG00000176406 117 0 0 77 5 6.09756 ADCY8 0 genome.wustl.edu 37 8 131916177 131916177 + Silent SNP A A C TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 8 131916177 131916177 A C SNP ADCY8 ENST00000286355 human ensembl 74_37 -1 known silent c.1752 p.T584 1.000 pfam_A/G_cyclase,superfamily_A/G_cyclase pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase - no_errors ADCY8 HGNC ENSG00000155897 229 0 0 126 8 5.97015 SLCO5A1 0 genome.wustl.edu 37 8 70744581 70744581 + Missense_Mutation SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 8 70744581 70744581 C T SNP SLCO5A1 ENST00000260126 human ensembl 74_37 -1 known missense c.328 p.A110T 0.324 NULL pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter - no_errors SLCO5A1 HGNC ENSG00000137571 146 0 0 64 5 7.24638 BAAT 0 genome.wustl.edu 37 9 104124952 104124952 + Missense_Mutation SNP G G T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 9 104124952 104124952 G T SNP BAAT ENST00000259407 human ensembl 74_37 -1 known missense c.1015 p.Q339K 0.004 pfam_BAAT_C,pirsf_Acyl-CoA_thioEstase_long-chain pfam_BAAT_C,pfam_Thio_Ohase/aa_AcTrfase,pirsf_Acyl-CoA_thioEstase_long-chain - no_errors BAAT HGNC ENSG00000136881 181 0 0 76 8 9.52381 TNC 0 genome.wustl.edu 37 9 117840372 117840372 + Missense_Mutation SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 9 117840372 117840372 C T SNP TNC ENST00000350763 human ensembl 74_37 -1 known missense c.2524 p.V842M 0.894 pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3 pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3 - no_errors TNC HGNC ENSG00000041982 111 0 0 42 5 10.6383 RECK 0 genome.wustl.edu 37 9 36083483 36083483 + Silent SNP C C T TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 9 36083483 36083483 C T SNP RECK ENST00000377966 human ensembl 74_37 +1 known silent c.561 p.C187 0.996 NULL pfam_Kazal_dom,superfamily_Prot_inh_PMP,smart_Kazal_dom - no_errors RECK HGNC ENSG00000122707 69 0 0 45 3 6.25 MMGT1 0 genome.wustl.edu 37 X 135049608 135049608 + Silent SNP A A G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f X 135049608 135049608 A G SNP MMGT1 ENST00000433339 human ensembl 74_37 -1 known silent c.372 p.G124 0.930 pfam_Magnesium_transport pfam_Magnesium_transport - no_errors MMGT1 HGNC ENSG00000169446 170 0 0 67 8 10.6667 MAGEB3 0 genome.wustl.edu 37 X 30254145 30254145 + Missense_Mutation SNP A A G TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f X 30254145 30254145 A G SNP MAGEB3 ENST00000361644 human ensembl 74_37 +1 known missense c.104 p.K35R 0.000 pfam_Melanoma_ass_antigen_N pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE - no_errors MAGEB3 HGNC ENSG00000198798 48 0 0 23 3 11.5385 VPS45 0 genome.wustl.edu 37 1 150082514 150082514 + RNA DEL A A - TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 1 150082514 150082514 A - DEL VPS45 ENST00000484306 human ensembl 74_37 +1 known rna NULL NULL 0.965 - - - no_errors VPS45 HGNC ENSG00000136631 18 0 0 9 3 25 CEP164P1 0 genome.wustl.edu 37 10 45498706 45498706 + RNA DEL T T - TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 10 45498706 45498706 T - DEL CEP164P1 ENST00000456938 human ensembl 74_37 -1 known rna NULL NULL 0.000 - - - no_errors CEP164P1 HGNC ENSG00000226937 19 0 0 10 2 16.6667 DIAPH1 0 genome.wustl.edu 37 5 140953564 140953566 + In_Frame_Del DEL GGA GGA - TCGA-BR-8371-01A-11D-2340-08 TCGA-BR-8371-10A-01D-2341-08 GGA GGA Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 8509693c-ad35-4c24-80de-f84ae07fe87e be24ceb1-6f72-48d3-8dc9-7649fd72609f 5 140953564 140953566 GGA - DEL DIAPH1 ENST00000253811 human ensembl 74_37 -1 known in_frame_del c.1853_1851 p.P620in_frame_del 0.010:0.008:0.007 pfam_Formin_homology_1 pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Formin_homology_1,pfam_Drf_DAD,superfamily_ARM-type_fold,superfamily_tRNA-bd_arm,smart_FH2_Formin - no_errors DIAPH1 HGNC ENSG00000131504 14 0 0 4 2 33.3333