Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	 ensembl_gene_id	tier	dbSNP	GMAF	n_ref_count	n_alt_count	normal_vaf	t_ref_count	t_alt_count	tumor_vaf	n_ref_count_val	n_alt_count_val	normal_vaf_val	t_ref_count_val	t_alt_count_val	tumor_vaf_val
GPA	0	genome.wustl.edu	37	16	5078957	5078957	+	Missense_Mutation	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	16	5078957	5078957	C	T	SNP	GPA	ENST00000312251	human	ensembl	74_37	-1	known	missense	c.844	p.A282T	1.000	pfam_DUF2233	pfam_DUF2233,pfscan_EG-like_dom	-	no_errors	GPA	HGNC	ENSG00000103174	tier1	-	-	26	0	0.00	23	17	42.50	70	0	0.00	48	37	43.53
MDN1	0	genome.wustl.edu	37	6	90448081	90448081	+	Missense_Mutation	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	6	90448081	90448081	G	A	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.4687	p.R1563C	0.998	superfamily_P-loop_NTPase,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	tier1	-	-	94	0	0.00	48	25	34.25	67	0	0.00	31	18	36.73
CXXC1	0	genome.wustl.edu	37	18	47811580	47811580	+	Missense_Mutation	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	18	47811580	47811580	G	A	SNP	CXXC1	ENST00000412036	human	ensembl	74_37	-1	known	missense	c.704	p.P235L	1.000	NULL	pfam_CpG-bd_C,pfam_Znf_CXXC,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	CXXC1	HGNC	ENSG00000154832	tier1	-	-	98	0	0.00	32	6	15.79	16	0	0.00	11	5	31.25
PFKM	0	genome.wustl.edu	37	12	48501209	48501209	+	Missense_Mutation	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	12	48501209	48501209	G	A	SNP	PFKM	ENST00000547581	human	ensembl	74_37	+1	known	missense	c.53	p.R18H	0.301	NULL	NULL	-	no_errors	PFKM	HGNC	ENSG00000152556	tier1	-	-	45	0	0.00	45	19	29.69	39	0	0.00	78	17	17.71
DACT1	0	genome.wustl.edu	37	14	59112535	59112535	+	Silent	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	14	59112535	59112535	G	A	SNP	DACT1	ENST00000335867	human	ensembl	74_37	+1	known	silent	c.1194	p.A398	0.000	NULL	NULL	-	no_errors	DACT1	HGNC	ENSG00000165617	tier1	rs111351020	-	73	0	0.00	49	16	24.62	82	0	0.00	116	30	20.55
ZNF429	0	genome.wustl.edu	37	19	21719972	21719972	+	Missense_Mutation	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	19	21719972	21719972	G	A	SNP	ZNF429	ENST00000358491	human	ensembl	74_37	+1	novel	missense	c.1117	p.E373K	0.040	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF429	HGNC	ENSG00000197013	tier1	-	-	21	0	0.00	11	16	59.26	12	0	0.00	10	9	47.37
MYO18B	0	genome.wustl.edu	37	22	26159314	26159314	+	Silent	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	22	26159314	26159314	G	A	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	silent	c.156	p.A52	0.000	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tR-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	tier1	-	-	40	0	0.00	20	23	53.49	41	0	0.00	26	20	43.48
ARHGEF26	0	genome.wustl.edu	37	3	153935690	153935690	+	Silent	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	3	153935690	153935690	G	A	SNP	ARHGEF26	ENST00000356448	human	ensembl	74_37	+1	known	silent	c.1878	p.K626	1.000	superfamily_DH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF26	HGNC	ENSG00000114790	tier1	-	-	102	0	0.00	66	39	37.14	135	0	0.00	78	37	32.17
GK2	0	genome.wustl.edu	37	4	80328766	80328766	+	Missense_Mutation	SNP	T	T	C			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	4	80328766	80328766	T	C	SNP	GK2	ENST00000358842	human	ensembl	74_37	-1	known	missense	c.589	p.T197A	0.999	pfam_Carb_kinase_FGGY_N,tigrfam_Glycerol_kin	pfam_Carb_kinase_FGGY_N,pfam_Carb_kinase_FGGY_C,tigrfam_Glycerol_kin	-	no_errors	GK2	HGNC	ENSG00000196475	tier1	-	-	56	0	0.00	43	12	21.82	77	0	0.00	60	19	24.05
NRXN1	0	genome.wustl.edu	37	2	50847269	50847269	+	Missense_Mutation	SNP	T	T	C			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	2	50847269	50847269	T	C	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.1187	p.D396G	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	39	0	0.00	11	11	50.00	84	0	0.00	52	24	31.58
ENSG00000214397	0	genome.wustl.edu	37	15	100256626	100256626	+	Missense_Mutation	SNP	C	C	G			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	15	100256626	100256626	C	G	SNP	ENSG00000214397	ENST00000378904	human	ensembl	74_37	-1	known	missense	c.377	p.S126T	1.000	NULL	NULL	-	no_errors	DKFZP779J2370	Uniprot_gn	ENSG00000214397	tier1	-	-	32	0	0.00	23	7	23.33	71	0	0.00	62	15	19.48
MDN1	0	genome.wustl.edu	37	6	90513121	90513121	+	Silent	SNP	T	T	C			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	6	90513121	90513121	T	C	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	silent	c.255	p.Q85	0.871	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	tier1	-	-	58	0	0.00	12	20	62.50	78	0	0.00	14	39	73.58
TBXAS1	0	genome.wustl.edu	37	7	139653173	139653173	+	Missense_Mutation	SNP	C	C	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	7	139653173	139653173	C	A	SNP	TBXAS1	ENST00000416849	human	ensembl	74_37	+1	known	missense	c.598	p.P200T	0.999	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	TBXAS1	HGNC	ENSG00000059377	tier1	-	-	34	0	0.00	16	5	23.81	91	0	0.00	57	30	34.48
ACOT12	0	genome.wustl.edu	37	5	80626231	80626231	+	Silent	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	5	80626231	80626231	C	T	SNP	ACOT12	ENST00000307624	human	ensembl	74_37	-1	known	silent	c.1650	p.G550	0.000	NULL	pfam_Thioestr_supf,pfam_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	ACOT12	HGNC	ENSG00000172497	tier1	-	-	27	0	0.00	23	4	14.81	110	1	0.90	118	42	26.09
SYT3	0	genome.wustl.edu	37	19	51132748	51132748	+	Missense_Mutation	SNP	G	G	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	19	51132748	51132748	G	T	SNP	SYT3	ENST00000338916	human	ensembl	74_37	-1	known	missense	c.1084	p.P362T	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	SYT3	HGNC	ENSG00000213023	tier1	-	-	53	0	0.00	20	8	28.57	50	0	0.00	22	13	37.14
ABCA5	0	genome.wustl.edu	37	17	67266783	67266783	+	Missense_Mutation	SNP	T	T	G			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	17	67266783	67266783	T	G	SNP	ABCA5	ENST00000392677	human	ensembl	74_37	-1	known	missense	c.3004	p.I1002L	0.998	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA5	HGNC	ENSG00000154265	tier1	-	-	47	0	0.00	19	8	29.63	69	0	0.00	41	9	18.00
BAIAP3	0	genome.wustl.edu	37	16	1391868	1391868	+	Splice_Site	SNP	G	G	C			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	16	1391868	1391868	G	C	SNP	BAIAP3	ENST00000324385	human	ensembl	74_37	+1	known	splice_site	c.881+1	e9+1	1.000	-	-	-	no_errors	BAIAP3	HGNC	ENSG00000007516	tier1	-	-	72	0	0.00	87	14	13.86	27	0	0.00	44	8	15.38
ZNF790	0	genome.wustl.edu	37	19	37309350	37309350	+	Silent	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	19	37309350	37309350	G	A	SNP	ZNF790	ENST00000356725	human	ensembl	74_37	-1	known	silent	c.1896	p.F632	0.036	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF790	HGNC	ENSG00000197863	tier1	-	-	52	0	0.00	41	9	18.00	77	0	0.00	62	17	21.52
ACACB	0	genome.wustl.edu	37	12	109604769	109604769	+	Missense_Mutation	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	12	109604769	109604769	C	T	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	missense	c.757	p.R253C	1.000	superfamily_PreATP-grasp_dom	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555	tier1	rs149394526	-	47	0	0.00	23	10	30.30	64	0	0.00	52	16	23.53
MDGA2	0	genome.wustl.edu	37	14	47613285	47613285	+	Missense_Mutation	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	14	47613285	47613285	G	A	SNP	MDGA2	ENST00000439988	human	ensembl	74_37	-1	known	missense	c.788	p.T263I	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA2	Uniprot_gn	ENSG00000272781	tier1	-	-	58	0	0.00	46	7	13.21	139	0	0.00	126	28	18.06
SACS	0	genome.wustl.edu	37	13	23910564	23910564	+	Missense_Mutation	SNP	C	C	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	13	23910564	23910564	C	A	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.7451	p.C2484F	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	80	0	0.00	50	21	29.58	103	0	0.00	41	16	28.07
KIAA1045	0	genome.wustl.edu	37	9	34971556	34971556	+	Silent	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	9	34971556	34971556	C	T	SNP	KIAA1045	ENST00000242315	human	ensembl	74_37	+1	known	silent	c.261	p.G87	0.080	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	KIAA1045	HGNC	ENSG00000122733	tier1	-	-	41	0	0.00	23	11	32.35	68	0	0.00	30	20	40.00
CSMD1	0	genome.wustl.edu	37	8	3565992	3565992	+	Missense_Mutation	SNP	T	T	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	8	3565992	3565992	T	A	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.953	p.K318M	1.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	30	0	0.00	23	12	34.29	115	0	0.00	103	24	18.90
HOXC10	0	genome.wustl.edu	37	12	54383454	54383454	+	R	SNP	G	G	C			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	12	54383454	54383454	G	C	SNP	HOXC10	ENST00000511575	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.523	-	-	-	no_errors	HOXC10	HGNC	ENSG00000180818	tier1	-	-	23	0	0.00	12	3	20.00	100	0	0.00	71	25	26.04
CRELD1	0	genome.wustl.edu	37	3	9984866	9984866	+	R	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	3	9984866	9984866	C	T	SNP	CRELD1	ENST00000489674	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CRELD1	HGNC	ENSG00000163703	tier1	-	-	36	0	0.00	29	8	21.62	16	0	0.00	20	9	31.03
GPRC5B	0	genome.wustl.edu	37	16	19883143	19883143	+	Missense_Mutation	SNP	T	T	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	16	19883143	19883143	T	A	SNP	GPRC5B	ENST00000537135	human	ensembl	74_37	-1	known	missense	c.1103	p.N368I	0.409	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPRC5B	HGNC	ENSG00000167191	tier1	-	-	48	0	0.00	57	12	17.39	48	0	0.00	93	19	16.96
TRIM44	0	genome.wustl.edu	37	11	35706846	35706846	+	Silent	SNP	T	T	C			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	11	35706846	35706846	T	C	SNP	TRIM44	ENST00000299413	human	ensembl	74_37	+1	known	silent	c.709	p.L237	1.000	NULL	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	-	no_errors	TRIM44	HGNC	ENSG00000166326	tier1	-	-	55	0	0.00	30	11	26.83	92	0	0.00	82	47	36.43
GALNT7	0	genome.wustl.edu	37	4	174090036	174090036	+	Missense_Mutation	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	4	174090036	174090036	G	A	SNP	GALNT7	ENST00000265000	human	ensembl	74_37	+1	known	missense	c.50	p.S17N	0.997	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT7	HGNC	ENSG00000109586	tier1	-	-	104	0	0.00	59	22	27.16	70	0	0.00	33	17	33.33
MYO18A	0	genome.wustl.edu	37	17	27401360	27401360	+	R	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	17	27401360	27401360	C	T	SNP	MYO18A	ENST00000529578	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MYO18A	HGNC	ENSG00000196535	tier1	-	-	27	0	0.00	20	10	33.33	88	0	0.00	60	36	37.50
PCDHA13	0	genome.wustl.edu	37	5	140262706	140262706	+	Missense_Mutation	SNP	G	G	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	5	140262706	140262706	G	T	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	missense	c.853	p.V285L	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389	tier1	-	-	32	0	0.00	30	8	21.05	86	0	0.00	73	18	19.78
TRIM31	0	genome.wustl.edu	37	6	30078449	30078449	+	Missense_Mutation	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	6	30078449	30078449	C	T	SNP	TRIM31	ENST00000376734	human	ensembl	74_37	-1	known	missense	c.520	p.V174I	0.445	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,prints_Znf_B-box_chordata,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM31	HGNC	ENSG00000204616	tier1	-	-	39	0	0.00	27	13	32.50	121	0	0.00	57	30	34.48
SH3BP5	0	genome.wustl.edu	37	3	15311315	15311315	+	Missense_Mutation	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	3	15311315	15311315	C	T	SNP	SH3BP5	ENST00000383791	human	ensembl	74_37	-1	known	missense	c.400	p.E134K	1.000	pfam_SH3-bd_5	pfam_SH3-bd_5	-	no_errors	SH3BP5	HGNC	ENSG00000131370	tier1	-	-	25	0	0.00	26	6	18.75	8	0	0.00	23	3	11.54
HR	0	genome.wustl.edu	37	8	21983187	21983187	+	Silent	SNP	C	C	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	8	21983187	21983187	C	A	SNP	HR	ENST00000381418	human	ensembl	74_37	-1	known	silent	c.1464	p.L488	0.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	HR	HGNC	ENSG00000168453	tier1	-	-	105	0	0.00	62	22	26.19	66	0	0.00	62	24	27.91
ZNF655	0	genome.wustl.edu	37	7	99171504	99171504	+	R	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	7	99171504	99171504	C	T	SNP	ZNF655	ENST00000419215	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.307	-	-	-	no_errors	ZNF655	HGNC	ENSG00000197343	tier1	-	-	26	0	0.00	15	7	31.82	33	0	0.00	28	12	30.00
FLJ46361	0	genome.wustl.edu	37	10	124558622	124558622	+	R	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	10	124558622	124558622	C	T	SNP	FLJ46361	ENST00000605982	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.456	-	-	-	no_errors	RP11-318C4.2	Clone_based_vega_gene	ENSG00000176584	tier1	-	-	28	0	0.00	11	10	47.62	53	0	0.00	25	5	16.67
SERPINB3	0	genome.wustl.edu	37	18	61324115	61324115	+	Missense_Mutation	SNP	C	C	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	18	61324115	61324115	C	A	SNP	SERPINB3	ENST00000283752	human	ensembl	74_37	-1	known	missense	c.718	p.D240Y	0.055	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB3	HGNC	ENSG00000057149	tier1	-	-	75	0	0.00	55	19	25.68	34	0	0.00	18	2	10.00
GLOD4	0	genome.wustl.edu	37	17	673297	673297	+	Missense_Mutation	SNP	A	A	C			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	17	673297	673297	A	C	SNP	GLOD4	ENST00000301328	human	ensembl	74_37	-1	known	missense	c.776	p.I259S	1.000	NULL	NULL	-	no_errors	GLOD4	HGNC	ENSG00000167699	tier1	-	-	72	0	0.00	32	14	30.43	92	0	0.00	37	13	26.00
CAMKV	0	genome.wustl.edu	37	3	49898704	49898704	+	Silent	SNP	C	C	T			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	3	49898704	49898704	C	T	SNP	CAMKV	ENST00000477224	human	ensembl	74_37	-1	known	silent	c.471	p.L157	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMKV	HGNC	ENSG00000164076	tier1	-	-	37	0	0.00	25	11	30.56	70	0	0.00	93	23	19.83
MYO18B	0	genome.wustl.edu	37	22	26164163	26164163	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G	G	-	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	22	26164163	26164163	G	-	DEL	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	frame_shift_del	c.280	p.D94fs	0.001	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tR-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	tier1			50	0	0.00	29	8	21.62	47	0	0.00	32	14	30.43
TLR5	0	genome.wustl.edu	37	1	223285856	223285856	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	T	T	T	-	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	1	223285856	223285856	T	-	DEL	TLR5	ENST00000342210	human	ensembl	74_37	-1	known	frame_shift_del	c.518	p.K173fs	0.001	smart_Leu-rich_rpt_typical-subtyp	pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR5	HGNC	ENSG00000187554	tier1			27	0	0.00	17	11	39.29	121	0	0.00	119	68	36.36
TSSK2	0	genome.wustl.edu	37	22	19119283	19119283	+	Missense_Mutation	SNP	T	T	G			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	22	19119283	19119283	T	G	SNP	TSSK2	ENST00000399635	human	ensembl	74_37	+1	known	missense	c.371	p.V124G	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TSSK2	HGNC	ENSG00000206203	tier1	-	-	13	0	0.00	25	8	24.24	42	0	0.00	97	8	7.62
BEST1	0	genome.wustl.edu	37	11	61725857	61725857	+	Silent	SNP	G	G	A			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	11	61725857	61725857	G	A	SNP	BEST1	ENST00000524926	human	ensembl	74_37	+1	known	silent	c.954	p.Q318	0.000	NULL	pfam_Bestrophin/UPF0187	-	no_errors	BEST1	HGNC	ENSG00000167995	tier1	-	-	48	0	0.00	18	7	28.00	19	0	0.00	4	1	20.00
FAM90A1	0	genome.wustl.edu	37	12	8375178	8375178	+	Missense_Mutation	SNP	T	T	G			TCGA-IE-A3OV-01A-11D-A228-09	TCGA-IE-A3OV-11A-22D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c52a1b8-fc8a-4df4-b1c2-c5154ef2c8c0	482bbe0c-c0a1-46f8-a7d9-6e98423cf2d8	12	8375178	8375178	T	G	SNP	FAM90A1	ENST00000307435	human	ensembl	74_37	-1	known	missense	c.635	p.Q212P	0.005	NULL	NULL	-	no_errors	FAM90A1	HGNC	ENSG00000171847	tier1	-	-	280	0	0.00	206	49	19.22	0	0	0.00	0	0	0.00