Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	 ensembl_gene_id	tier	dbSNP	GMAF	n_ref_count	n_alt_count	normal_vaf	t_ref_count	t_alt_count	tumor_vaf	n_ref_count_val	n_alt_count_val	normal_vaf_val	t_ref_count_val	t_alt_count_val	tumor_vaf_val
HSPA13	0	genome.wustl.edu	37	21	15746041	15746041	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	21	15746041	15746041	G	A	SNP	HSPA13	ENST00000285667	human	ensembl	74_37	-1	known	missense	c.1313	p.T438M	0.995	pfam_Hsp_70_fam,prints_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA13	HGNC	ENSG00000155304	tier1	-	-	45	0	0.00	23	9	28.12	91	0	0.00	33	29	46.77
MPP2	0	genome.wustl.edu	37	17	41958094	41958094	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	17	41958094	41958094	A	G	SNP	MPP2	ENST00000461854	human	ensembl	74_37	-1	known	missense	c.1187	p.M396T	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP2	HGNC	ENSG00000108852	tier1	-	-	14	0	0.00	9	7	43.75	62	0	0.00	27	18	40.00
ZNF324B	0	genome.wustl.edu	37	19	58967100	58967100	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	19	58967100	58967100	C	G	SNP	ZNF324B	ENST00000336614	human	ensembl	74_37	+1	known	missense	c.789	p.S263R	0.063	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324B	HGNC	ENSG00000249471	tier1	-	-	25	0	0.00	32	6	15.79	39	0	0.00	59	9	13.24
SHARPIN	0	genome.wustl.edu	37	8	145154939	145154939	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	8	145154939	145154939	G	A	SNP	SHARPIN	ENST00000398712	human	ensembl	74_37	-1	known	missense	c.410	p.P137L	0.193	NULL	pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	SHARPIN	HGNC	ENSG00000179526	tier1	-	-	56	0	0.00	18	46	71.88	50	0	0.00	41	72	63.72
CHTOP	0	genome.wustl.edu	37	1	153614745	153614745	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	1	153614745	153614745	G	C	SNP	CHTOP	ENST00000368694	human	ensembl	74_37	+1	known	missense	c.243	p.K81N	1.000	NULL	NULL	-	no_errors	CHTOP	HGNC	ENSG00000160679	tier1	-	-	47	0	0.00	41	13	24.07	82	0	0.00	88	26	22.81
PLEKHA3	0	genome.wustl.edu	37	2	179365893	179365893	+	Silent	SNP	A	A	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	2	179365893	179365893	A	G	SNP	PLEKHA3	ENST00000234453	human	ensembl	74_37	+1	known	silent	c.765	p.E255	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA3	HGNC	ENSG00000116095	tier1	-	-	68	0	0.00	19	30	61.22	88	0	0.00	24	46	65.71
CNIH4	0	genome.wustl.edu	37	1	224553606	224553606	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	1	224553606	224553606	A	G	SNP	CNIH4	ENST00000465271	human	ensembl	74_37	+1	known	missense	c.164	p.H55R	0.999	pfam_Cornichon	pfam_Cornichon	-	no_errors	CNIH4	HGNC	ENSG00000143771	tier1	-	-	57	0	0.00	10	45	81.82	189	0	0.00	23	79	77.45
ANXA7	0	genome.wustl.edu	37	10	75156285	75156285	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	10	75156285	75156285	G	C	SNP	ANXA7	ENST00000372919	human	ensembl	74_37	-1	known	missense	c.427	p.P143A	0.924	NULL	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinVII,prints_AnnexinIV	-	no_errors	ANXA7	HGNC	ENSG00000138279	tier1	-	-	43	0	0.00	5	7	58.33	161	0	0.00	19	40	67.80
FEZF1	0	genome.wustl.edu	37	7	121943846	121943846	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	7	121943846	121943846	C	A	SNP	FEZF1	ENST00000442488	human	ensembl	74_37	-1	known	missense	c.646	p.V216L	0.996	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	FEZF1	HGNC	ENSG00000128610	tier1	-	-	52	0	0.00	22	5	18.52	103	0	0.00	71	13	15.48
SPERT	0	genome.wustl.edu	37	13	46287374	46287374	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	13	46287374	46287374	G	A	SNP	SPERT	ENST00000310521	human	ensembl	74_37	+1	known	missense	c.214	p.A72T	0.008	NULL	NULL	-	no_errors	SPERT	HGNC	ENSG00000174015	tier1	-	-	80	0	0.00	16	35	68.63	25	0	0.00	10	18	64.29
OR2B11	0	genome.wustl.edu	37	1	247615033	247615033	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	1	247615033	247615033	C	A	SNP	OR2B11	ENST00000318749	human	ensembl	74_37	-1	known	missense	c.252	p.Q84H	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2B11	HGNC	ENSG00000177535	tier1	-	-	33	0	0.00	9	16	64.00	114	0	0.00	20	61	74.39
RALYL	0	genome.wustl.edu	37	8	85800008	85800008	+	Silent	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	8	85800008	85800008	G	A	SNP	RALYL	ENST00000521268	human	ensembl	74_37	+1	known	silent	c.855	p.E285	1.000	pirsf_hnRNP_C_Raly	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	RALYL	HGNC	ENSG00000184672	tier1	-	-	61	0	0.00	35	14	28.57	157	0	0.00	63	38	37.62
TNR	0	genome.wustl.edu	37	1	175348838	175348838	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	1	175348838	175348838	G	A	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	missense	c.1813	p.R605C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147	tier1	-	-	48	0	0.00	9	31	75.61	87	0	0.00	18	40	68.97
PRDM9	0	genome.wustl.edu	37	5	23524559	23524559	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	5	23524559	23524559	G	T	SNP	PRDM9	ENST00000296682	human	ensembl	74_37	+1	known	missense	c.1067	p.W356L	1.000	pfscan_SET_dom	pfam_Znf_C2H2,pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM9	HGNC	ENSG00000164256	tier1	-	-	90	0	0.00	62	7	10.14	139	0	0.00	68	12	15.00
KRT84	0	genome.wustl.edu	37	12	52771877	52771877	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	12	52771877	52771877	C	T	SNP	KRT84	ENST00000257951	human	ensembl	74_37	-1	known	missense	c.1744	p.G582S	0.102	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT84	HGNC	ENSG00000161849	tier1	-	-	35	0	0.00	25	9	26.47	7	0	0.00	11	5	31.25
PLIN5	0	genome.wustl.edu	37	19	4523577	4523577	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	19	4523577	4523577	G	A	SNP	PLIN5	ENST00000381848	human	ensembl	74_37	-1	known	missense	c.1355	p.P452L	0.000	NULL	pfam_Perilipin,pirsf_Perilipin	-	no_errors	PLIN5	HGNC	ENSG00000214456	tier1	-	-	73	0	0.00	41	18	30.51	50	0	0.00	20	12	37.50
UGT2B15	0	genome.wustl.edu	37	4	69535762	69535762	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	4	69535762	69535762	G	A	SNP	UGT2B15	ENST00000338206	human	ensembl	74_37	-1	known	missense	c.575	p.P192L	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B15	HGNC	ENSG00000196620	tier1	-	-	109	0	0.00	54	12	18.18	95	0	0.00	45	10	18.18
PASD1	0	genome.wustl.edu	37	X	150840063	150840063	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	X	150840063	150840063	C	T	SNP	PASD1	ENST00000370357	human	ensembl	74_37	+1	known	missense	c.1249	p.R417C	0.000	NULL	superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PASD1	HGNC	ENSG00000166049	tier1	rs201707889	-	17	0	0.00	2	9	81.82	72	0	0.00	11	47	81.03
PSD3	0	genome.wustl.edu	37	8	18393462	18393462	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	8	18393462	18393462	G	A	SNP	PSD3	ENST00000440756	human	ensembl	74_37	-1	known	missense	c.2941	p.R981C	0.999	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	PSD3	HGNC	ENSG00000156011	tier1	-	-	16	0	0.00	24	8	25.00	122	0	0.00	72	31	30.10
DH3	0	genome.wustl.edu	37	16	21030952	21030952	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	16	21030952	21030952	C	A	SNP	DH3	ENST00000261383	human	ensembl	74_37	-1	known	nonsense	c.6016	p.E2006*	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DH3	HGNC	ENSG00000158486	tier1	-	-	126	0	0.00	35	10	22.22	105	0	0.00	63	15	19.23
RIMBP2	0	genome.wustl.edu	37	12	130907024	130907024	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	12	130907024	130907024	G	T	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	missense	c.2444	p.S815Y	0.991	NULL	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709	tier1	-	-	38	0	0.00	31	16	34.04	66	1	1.49	37	32	46.38
LARP1B	0	genome.wustl.edu	37	4	129012526	129012526	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	4	129012526	129012526	A	T	SNP	LARP1B	ENST00000326639	human	ensembl	74_37	+1	known	missense	c.527	p.Y176F	1.000	NULL	pfam_Lupus_La_R-bd,smart_Lupus_La_R-bd,smart_DM15,pfscan_Lupus_La_R-bd	-	no_errors	LARP1B	HGNC	ENSG00000138709	tier1	-	-	65	0	0.00	36	5	12.20	126	0	0.00	82	20	19.61
MYH1	0	genome.wustl.edu	37	17	10405167	10405167	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	17	10405167	10405167	T	G	SNP	MYH1	ENST00000226207	human	ensembl	74_37	-1	known	missense	c.3173	p.K1058T	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tR-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC	ENSG00000109061	tier1	-	-	80	0	0.00	54	6	10.00	121	0	0.00	112	13	10.40
TRANK1	0	genome.wustl.edu	37	3	36873669	36873669	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	3	36873669	36873669	G	A	SNP	TRANK1	ENST00000429976	human	ensembl	74_37	-1	known	missense	c.7273	p.R2425C	1.000	NULL	pfam_UvrD-like_ATP-bd,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom	-	no_errors	TRANK1	HGNC	ENSG00000168016	tier1	-	-	64	0	0.00	29	8	21.62	126	0	0.00	77	10	11.49
OR8H2	0	genome.wustl.edu	37	11	55872824	55872824	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	11	55872824	55872824	C	A	SNP	OR8H2	ENST00000313503	human	ensembl	74_37	+1	known	missense	c.306	p.F102L	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H2	HGNC	ENSG00000181767	tier1	-	-	68	0	0.00	35	28	44.44	59	0	0.00	23	20	46.51
LRP1	0	genome.wustl.edu	37	12	57587731	57587731	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	12	57587731	57587731	C	G	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.7854	p.I2618M	0.073	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	tier1	-	-	71	0	0.00	101	26	20.47	94	0	0.00	77	24	23.76
BTK	0	genome.wustl.edu	37	X	100611813	100611813	+	Silent	SNP	G	G	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	X	100611813	100611813	G	T	SNP	BTK	ENST00000308731	human	ensembl	74_37	-1	known	silent	c.1308	p.S436	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_Znf_Btk_motif,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,prints_SH2,prints_Znf_Btk_motif	-	no_errors	BTK	HGNC	ENSG00000010671	tier1	-	-	43	0	0.00	24	4	14.29	65	0	0.00	55	13	19.12
GPR149	0	genome.wustl.edu	37	3	154055902	154055902	+	Silent	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	3	154055902	154055902	G	A	SNP	GPR149	ENST00000389740	human	ensembl	74_37	-1	known	silent	c.1782	p.S594	0.997	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR149	HGNC	ENSG00000174948	tier1	-	-	75	0	0.00	39	13	25.00	105	0	0.00	77	14	15.38
SVEP1	0	genome.wustl.edu	37	9	113217882	113217882	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	9	113217882	113217882	A	C	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.3775	p.S1259A	0.000	pfam_EG-like_dom,pfam_EGF_extracell,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124	tier1	-	-	72	0	0.00	35	7	16.67	160	0	0.00	125	17	11.97
SLC5A1	0	genome.wustl.edu	37	22	32498162	32498162	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	22	32498162	32498162	G	A	SNP	SLC5A1	ENST00000266088	human	ensembl	74_37	+1	known	missense	c.1603	p.A535T	0.061	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A1	HGNC	ENSG00000100170	tier1	-	-	48	0	0.00	7	28	80.00	126	1	0.78	15	90	85.71
CADPS	0	genome.wustl.edu	37	3	62499312	62499312	+	Splice_Site	SNP	C	C	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	3	62499312	62499312	C	T	SNP	CADPS	ENST00000283269	human	ensembl	74_37	-1	known	splice_site	c.2650+1	e17+1	1.000	-	-	-	no_errors	CADPS	HGNC	ENSG00000163618	tier1	-	-	51	0	0.00	20	18	47.37	123	0	0.00	71	32	31.07
TRRAP	0	genome.wustl.edu	37	7	98569420	98569420	+	Splice_Site	SNP	A	A	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	7	98569420	98569420	A	G	SNP	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	splice_site	c.7672-2	e51-2	0.988	-	-	-	no_errors	TRRAP	HGNC	ENSG00000196367	tier1	-	-	81	0	0.00	39	8	17.02	190	0	0.00	101	38	27.34
TENM3	0	genome.wustl.edu	37	4	183268045	183268045	+	Silent	SNP	A	A	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	4	183268045	183268045	A	G	SNP	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	silent	c.474	p.T158	0.997	pfam_Ten_N	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336	tier1	-	-	45	0	0.00	2	17	89.47	140	0	0.00	16	71	81.61
CCDC74B	0	genome.wustl.edu	37	2	130900293	130900293	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	2	130900293	130900293	T	C	SNP	CCDC74B	ENST00000392984	human	ensembl	74_37	-1	known	missense	c.263	p.Q88R	0.087	NULL	NULL	-	no_errors	CCDC74B	HGNC	ENSG00000152076	tier1	-	-	41	0	0.00	36	6	14.29	34	0	0.00	24	8	25.00
CLINT1	0	genome.wustl.edu	37	5	157230696	157230696	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	5	157230696	157230696	T	A	SNP	CLINT1	ENST00000296951	human	ensembl	74_37	-1	known	missense	c.920	p.D307V	1.000	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	CLINT1	HGNC	ENSG00000113282	tier1	-	-	62	0	0.00	31	8	20.00	126	0	0.00	60	13	17.81
ENSG00000258944	0	genome.wustl.edu	37	14	73739171	73739171	+	R	SNP	C	C	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	14	73739171	73739171	C	T	SNP	ENSG00000258944	ENST00000556578	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP4-647C14.3	Clone_based_vega_gene	ENSG00000258944	tier1	-	-	14	0	0.00	12	4	25.00	79	0	0.00	73	24	24.74
TUBGCP5	0	genome.wustl.edu	37	15	22864212	22864212	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	15	22864212	22864212	A	T	SNP	TUBGCP5	ENST00000283645	human	ensembl	74_37	+1	known	missense	c.2170	p.R724W	1.000	pfam_TUBGCP	pfam_TUBGCP	-	no_errors	TUBGCP5	HGNC	ENSG00000153575	tier1	-	-	81	0	0.00	49	9	15.52	103	0	0.00	68	13	16.05
ABCA8	0	genome.wustl.edu	37	17	66877336	66877336	+	Silent	SNP	T	T	C			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	17	66877336	66877336	T	C	SNP	ABCA8	ENST00000430352	human	ensembl	74_37	-1	known	silent	c.3963	p.L1321	0.993	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA8	HGNC	ENSG00000141338	tier1	-	-	78	0	0.00	20	12	37.50	208	0	0.00	87	38	30.40
LEF1-AS1	0	genome.wustl.edu	37	4	109094633	109094633	+	R	DEL	T	T	-			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	T	T	T	-	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	4	109094633	109094633	T	-	DEL	LEF1-AS1	ENST00000436413	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LEF1-AS1	HGNC	ENSG00000232021	tier1			43	0	0.00	33	5	13.16	61	0	0.00	50	7	12.28
SMCHD1	0	genome.wustl.edu	37	18	2740716	2740727	+	In_Frame_Del	DEL	ATCAGTACGGAA	ATCAGTACGGAA	-			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	ATCAGTACGGAA	ATCAGTACGGAA	ATCAGTACGGAA	-	ATCAGTACGGAA	ATCAGTACGGAA	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	18	2740716	2740727	ATCAGTACGGAA	-	DEL	SMCHD1	ENST00000320876	human	ensembl	74_37	+1	known	in_frame_del	c.3530_3541	p.YGNQ1179in_frame_del	1.000:1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_HATPase_ATP-bd,smart_SMC_hinge	-	no_errors	SMCHD1	HGNC	ENSG00000101596	tier1			132	0	0.00	32	17	34.69	132	0	0.00	32	17	34.69
PPHLN1	0	genome.wustl.edu	37	12	42836472	42836472	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	12	42836472	42836472	C	-	DEL	PPHLN1	ENST00000395568	human	ensembl	74_37	+1	known	frame_shift_del	c.1054	p.P353fs	0.319	NULL	NULL	-	no_errors	PPHLN1	HGNC	ENSG00000134283	tier1			77	0	0.00	69	7	9.21	112	0	0.00	112	16	12.50
TMEM209	0	genome.wustl.edu	37	7	129845200	129845224	+	Frame_Shift_Del	DEL	CCCGAAAACGCACCATGTCCTCTGG	CCCGAAAACGCACCATGTCCTCTGG	-			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	CCCGAAAACGCACCATGTCCTCTGG	CCCGAAAACGCACCATGTCCTCTGG	CCCGAAAACGCACCATGTCCTCTGG	-	CCCGAAAACGCACCATGTCCTCTGG	CCCGAAAACGCACCATGTCCTCTGG	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	7	129845200	129845224	CCCGAAAACGCACCATGTCCTCTGG	-	DEL	TMEM209	ENST00000397622	human	ensembl	74_37	-1	known	frame_shift_del	c.16_1	p.M1fs	0.997:1.000:0.999:0.984:0.992:0.992:0.996:1.000:1.000:1.000:1.000:1.000:1.000:0.990:0.710:0.588	NULL	pfam_Cytochrome_B561-rel	-	no_errors	TMEM209	HGNC	ENSG00000146842	tier1			131	0	0.00	95	12	11.21	131	0	0.00	95	12	11.21
CASR	0	genome.wustl.edu	37	3	122002847	122002847	+	Silent	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	3	122002847	122002847	G	A	SNP	CASR	ENST00000498619	human	ensembl	74_37	+1	known	silent	c.2076	p.P692	0.016	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	CASR	HGNC	ENSG00000036828	tier1	-	-	22	0	0.00	2	9	81.82	65	0	0.00	5	41	89.13
DPY19L1	0	genome.wustl.edu	37	7	35006559	35006559	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	7	35006559	35006559	C	A	SNP	DPY19L1	ENST00000310974	human	ensembl	74_37	-1	known	missense	c.820	p.V274F	1.000	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L1	HGNC	ENSG00000173852	tier1	-	-	220	0	0.00	10	56	84.85	104	0	0.00	9	65	87.84
MSLNL	0	genome.wustl.edu	37	16	830643	830643	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	16	830643	830643	G	T	SNP	MSLNL	ENST00000293892	human	ensembl	74_37	-1	known	missense	c.358	p.H120N	0.150	NULL	pfam_Mesothelin	-	no_errors	MSLNL	HGNC	ENSG00000162006	tier1	-	-	49	0	0.00	14	27	65.85	60	0	0.00	6	28	82.35
NR4A3	0	genome.wustl.edu	37	9	102590467	102590467	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	9	102590467	102590467	C	T	SNP	NR4A3	ENST00000330847	human	ensembl	74_37	+1	known	missense	c.176	p.T59M	0.845	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NOR1_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A3	HGNC	ENSG00000119508	tier1	-	-	20	0	0.00	6	16	72.73	127	0	0.00	5	55	91.67
OR5M3	0	genome.wustl.edu	37	11	56237609	56237609	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	11	56237609	56237609	A	G	SNP	OR5M3	ENST00000312240	human	ensembl	74_37	-1	known	missense	c.365	p.M122T	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M3	HGNC	ENSG00000174937	tier1	rs200070203	-	25	0	0.00	5	5	50.00	29	0	0.00	5	3	37.50
PLEKHG5	0	genome.wustl.edu	37	1	6530806	6530806	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	1	6530806	6530806	C	T	SNP	PLEKHG5	ENST00000537245	human	ensembl	74_37	-1	known	missense	c.1768	p.V590I	0.965	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG5	HGNC	ENSG00000171680	tier1	-	-	20	0	0.00	3	6	66.67	14	0	0.00	1	5	83.33
SCUBE3	0	genome.wustl.edu	37	6	35205748	35205748	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	6	35205748	35205748	C	A	SNP	SCUBE3	ENST00000394681	human	ensembl	74_37	+1	known	missense	c.830	p.T277N	1.000	smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,prints_Thrombomodulin	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom,prints_Thrombomodulin	-	no_errors	SCUBE3	HGNC	ENSG00000146197	tier1	-	-	68	0	0.00	4	36	90.00	68	1	1.45	3	41	93.18
SLC38A10	0	genome.wustl.edu	37	17	79226885	79226885	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	17	79226885	79226885	G	A	SNP	SLC38A10	ENST00000374759	human	ensembl	74_37	-1	known	missense	c.1444	p.R482C	1.000	NULL	pfam_AA_transpt_TM	-	no_errors	SLC38A10	HGNC	ENSG00000157637	tier1	rs142761487	-	55	0	0.00	16	32	66.67	21	0	0.00	2	18	90.00
ZNF876P	0	genome.wustl.edu	37	4	248151	248151	+	R	SNP	T	T	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	4	248151	248151	T	G	SNP	ZNF876P	ENST00000356347	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.974	-	-	-	no_errors	ZNF876P	HGNC	ENSG00000198155	tier1	-	-	47	0	0.00	16	14	46.67	40	0	0.00	9	13	59.09
CCNB3	0	genome.wustl.edu	37	X	50055541	50055541	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	X	50055541	50055541	C	T	SNP	CCNB3	ENST00000276014	human	ensembl	74_37	+1	known	missense	c.3332	p.T1111I	0.003	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082	tier1	-	-	34	0	0.00	38	11	22.45	93	0	0.00	61	4	6.06
WDR17	0	genome.wustl.edu	37	4	177094499	177094499	+	Nonsense_Mutation	SNP	T	T	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	4	177094499	177094499	T	G	SNP	WDR17	ENST00000280190	human	ensembl	74_37	+1	known	nonsense	c.3443	p.L1148*	0.294	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR17	HGNC	ENSG00000150627	tier1	-	-	98	0	0.00	72	7	8.86	158	0	0.00	77	6	7.23
TRAF7	0	genome.wustl.edu	37	16	2215902	2215902	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	16	2215902	2215902	G	T	SNP	TRAF7	ENST00000326181	human	ensembl	74_37	+1	known	missense	c.104	p.G35V	0.993	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_TRAF-like,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_Znf_TRAF,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TRAF7	HGNC	ENSG00000131653	tier1	-	-	50	0	0.00	35	6	14.63	128	0	0.00	81	4	4.71
MYBPC3	0	genome.wustl.edu	37	11	47364235	47364235	+	Silent	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	11	47364235	47364235	G	A	SNP	MYBPC3	ENST00000399249	human	ensembl	74_37	-1	known	silent	c.1518	p.D506	0.919	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC3	HGNC	ENSG00000134571	tier1	-	-	44	0	0.00	31	4	11.43	148	0	0.00	91	5	5.21
CPNE8	0	genome.wustl.edu	37	12	39079417	39079417	+	Silent	SNP	A	A	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	12	39079417	39079417	A	G	SNP	CPNE8	ENST00000331366	human	ensembl	74_37	-1	known	silent	c.1146	p.N382	1.000	pfam_Copine,smart_VWF_A,pfscan_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE8	HGNC	ENSG00000139117	tier1	-	-	59	0	0.00	47	5	9.62	101	0	0.00	115	11	8.73
ENSG00000268366	0	genome.wustl.edu	37	19	40949659	40949659	+	R	SNP	C	C	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	19	40949659	40949659	C	G	SNP	ENSG00000268366	ENST00000599050	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	CTC-492K19.4	Clone_based_vega_gene	ENSG00000268366	tier1	-	-	40	0	0.00	55	8	12.70	115	0	0.00	144	11	7.10
CELP	0	genome.wustl.edu	37	9	135962501	135962501	+	R	DEL	G	G	-			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G	G	-	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	9	135962501	135962501	G	-	DEL	CELP	ENST00000411440	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	CELP	HGNC	ENSG00000170827	tier1			8	0	0.00	6	5	45.45	15	1	6.25	3	9	75.00
FCGBP	0	genome.wustl.edu	37	19	40396215	40396215	+	Silent	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	19	40396215	40396215	G	A	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	silent	c.7182	p.H2394	0.017	smart_VWC_out,smart_VWF_C	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	tier1	-	-	16	0	0.00	11	5	31.25	5	0	0.00	8	1	11.11
CAD	0	genome.wustl.edu	37	7	45123761	45123761	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	7	45123761	45123761	C	T	SNP	CAD	ENST00000490531	human	ensembl	74_37	-1	known	missense	c.2018	p.G673D	0.000	NULL	pfam_Nas_poly-pep-assoc_cplx_dom,pfscan_Nas_poly-pep-assoc_cplx_dom	-	no_errors	CAD	HGNC	ENSG00000136274	tier1	-	-	76	0	0.00	29	4	12.12	0	0	0.00	0	0	0.00
WDR45B	0	genome.wustl.edu	37	17	80606364	80606365	+	R	INS	-	-	CGTGCGTG			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	17	80606364	80606365	-	CGTGCGTG	INS	WDR45B	ENST00000574828	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.042:0.012	-	-	-	no_errors	WDR45B	HGNC	ENSG00000141580	tier1			4	0	0.00	1	1	50.00	4	0	0.00	1	1	50.00
ZSCAN1	0	genome.wustl.edu	37	19	58549417	58549417	+	Silent	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	19	58549417	58549417	G	A	SNP	ZSCAN1	ENST00000282326	human	ensembl	74_37	+1	known	silent	c.213	p.A71	0.000	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN1	HGNC	ENSG00000152467	tier1	rs143287637	GMAF=0.0005	29	0	0.00	31	13	29.55	2	0	0.00	4	4	50.00
SLC35E2B	0	genome.wustl.edu	37	1	1607527	1607527	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	1	1607527	1607527	G	A	SNP	SLC35E2B	ENST00000234800	human	ensembl	74_37	-1	known	missense	c.434	p.T145M	1.000	pfam_DMT,pfam_UAA	pfam_Tpt_PEP_trans_dom,pfam_DMT,pfam_UAA	-	no_errors	SLC35E2B	HGNC	ENSG00000189339	tier1	-	-	127	0	0.00	45	11	19.64	155	0	0.00	86	3	3.37
ZNF600	0	genome.wustl.edu	37	19	53270275	53270275	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	19	53270275	53270275	G	A	SNP	ZNF600	ENST00000338230	human	ensembl	74_37	-1	known	missense	c.734	p.S245F	0.019	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF600	HGNC	ENSG00000189190	tier1	-	-	84	0	0.00	85	9	9.57	24	0	0.00	34	2	5.56
ENSG00000221696	0	genome.wustl.edu	37	9	32764361	32764361	+	R	SNP	A	A	G			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	9	32764361	32764361	A	G	SNP	ENSG00000221696	ENST00000408769	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.002	-	-	-	no_errors	AL157884.1	Clone_based_ensembl_gene	ENSG00000221696	tier1	-	-	49	0	0.00	48	5	9.43	68	0	0.00	52	2	3.70
ZNF600	0	genome.wustl.edu	37	19	53270247	53270247	+	Silent	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	19	53270247	53270247	G	A	SNP	ZNF600	ENST00000338230	human	ensembl	74_37	-1	known	silent	c.762	p.I254	0.039	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF600	HGNC	ENSG00000189190	tier1	-	-	76	0	0.00	96	11	10.28	16	0	0.00	35	3	7.89
ZNF600	0	genome.wustl.edu	37	19	53270527	53270527	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	19	53270527	53270527	G	A	SNP	ZNF600	ENST00000338230	human	ensembl	74_37	-1	known	missense	c.482	p.S161F	0.003	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF600	HGNC	ENSG00000189190	tier1	-	-	133	0	0.00	102	12	10.43	41	0	0.00	47	2	4.08
RAP1GDS1	0	genome.wustl.edu	37	4	99313196	99313205	+	Frame_Shift_Del	DEL	TGTGTCTTGT	TGTGTCTTGT	-			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	TGTGTCTTGT	TGTGTCTTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	4	99313196	99313205	TGTGTCTTGT	-	DEL	RAP1GDS1	ENST00000339360	human	ensembl	74_37	+1	known	frame_shift_del	c.605_614	p.C203fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.958:1.000:1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	RAP1GDS1	HGNC	ENSG00000138698	tier1			186	0	0.00	113	2	1.74	186	0	0.00	113	2	1.74
NOC3L	0	genome.wustl.edu	37	10	96109108	96109134	+	In_Frame_Del	DEL	TCACAGCTTCACAACACATTTCAGATA	TCACAGCTTCACAACACATTTCAGATA	-			TCGA-DX-A8BJ-01A-11D-A417-09	TCGA-DX-A8BJ-10B-01D-A41A-09	TCACAGCTTCACAACACATTTCAGATA	TCACAGCTTCACAACACATTTCAGATA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	55a38ea9-871b-482d-9404-6ac02887e21d	bfc943c3-2cf7-44cf-ba20-26d7646ae59e	10	96109108	96109134	TCACAGCTTCACAACACATTTCAGATA	-	DEL	NOC3L	ENST00000371350	human	ensembl	74_37	-1	known	in_frame_del	c.1156_1130	p.ISEMCCEAV377in_frame_del	0.984:0.526:0.997:0.998:0.981:1.000:1.000:0.980:1.000:1.000:1.000:1.000:1.000:0.998:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999:1.000:1.000:0.995:1.000	superfamily_ARM-type_fold,pirsf_Nucleolar_cplx-assoc_3	pfam_CCAAT-binding_factor,pfam_NOC3p,superfamily_ARM-type_fold,pirsf_Nucleolar_cplx-assoc_3	-	no_errors	NOC3L	HGNC	ENSG00000173145	tier1			115	0	0.00	45	3	6.25	115	0	0.00	45	3	6.25