Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	 ensembl_gene_id	tier	dbSNP	GMAF	n_ref_count	n_alt_count	normal_vaf	t_ref_count	t_alt_count	tumor_vaf	n_ref_count_val	n_alt_count_val	normal_vaf_val	t_ref_count_val	t_alt_count_val	tumor_vaf_val
FYB	0	genome.wustl.edu	37	5	39119670	39119670	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	5	39119670	39119670	T	G	SNP	FYB	ENST00000540520	human	ensembl	74_37	-1	known	missense	c.2235	p.E745D	1.000	superfamily_SH3_domain	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain	-	no_errors	FYB	HGNC	ENSG00000082074	tier1	-	-	49	0	0.00	48	32	40.00	37	0	0.00	35	31	46.97
RYR2	0	genome.wustl.edu	37	1	237863631	237863631	+	Silent	SNP	G	G	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	1	237863631	237863631	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	silent	c.9225	p.Q3075	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	50	0	0.00	130	69	34.67	128	0	0.00	122	50	29.07
TFDP3	0	genome.wustl.edu	37	X	132352121	132352121	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	X	132352121	132352121	T	A	SNP	TFDP3	ENST00000310125	human	ensembl	74_37	-1	known	missense	c.167	p.Q56L	1.000	pirsf_Transcrpt_fac_DP	pfam_Transc_factor_DP_C,pfam_E2F_TDP,pirsf_Transcrpt_fac_DP	-	no_errors	TFDP3	HGNC	ENSG00000183434	tier1	-	-	135	0	0.00	156	102	39.53	65	0	0.00	48	29	37.66
FCGR2B	0	genome.wustl.edu	37	1	161641251	161641251	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	1	161641251	161641251	C	T	SNP	FCGR2B	ENST00000358671	human	ensembl	74_37	+1	known	missense	c.203	p.T68I	0.932	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCGR2B	HGNC	ENSG00000072694	tier1	-	-	200	0	0.00	503	59	10.50	62	0	0.00	77	12	13.33
ANKEF1	0	genome.wustl.edu	37	20	10030397	10030397	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	20	10030397	10030397	G	T	SNP	ANKEF1	ENST00000378380	human	ensembl	74_37	+1	known	nonsense	c.1180	p.E394*	0.995	pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EF_hand_dom,prints_Ankyrin_rpt	-	no_errors	ANKEF1	HGNC	ENSG00000132623	tier1	-	-	37	0	0.00	52	34	39.53	61	0	0.00	36	31	46.27
KIAA2018	0	genome.wustl.edu	37	3	113374951	113374951	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	3	113374951	113374951	G	C	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	missense	c.5578	p.P1860A	0.940	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1	-	-	69	0	0.00	69	43	38.39	76	0	0.00	53	39	42.39
CYP2E1	0	genome.wustl.edu	37	10	135350749	135350749	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	10	135350749	135350749	C	A	SNP	CYP2E1	ENST00000252945	human	ensembl	74_37	+1	known	missense	c.1150	p.P384T	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2E-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2E1	HGNC	ENSG00000130649	tier1	-	-	40	0	0.00	15	50	76.92	101	0	0.00	22	57	72.15
CXCR2P1	0	genome.wustl.edu	37	2	218924727	218924727	+	R	SNP	T	T	G			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	2	218924727	218924727	T	G	SNP	CXCR2P1	ENST00000439871	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CXCR2P1	HGNC	ENSG00000229754	tier1	-	-	14	0	0.00	16	7	30.43	60	0	0.00	29	28	49.12
PRKCD	0	genome.wustl.edu	37	3	53218939	53218939	+	Silent	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	3	53218939	53218939	C	T	SNP	PRKCD	ENST00000330452	human	ensembl	74_37	+1	known	silent	c.837	p.L279	1.000	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Prot_kin_PKC_delta,prints_DAG/PE-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	PRKCD	HGNC	ENSG00000163932	tier1	-	-	34	0	0.00	40	37	48.05	49	0	0.00	20	24	54.55
TFPI	0	genome.wustl.edu	37	2	188349667	188349667	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	2	188349667	188349667	C	T	SNP	TFPI	ENST00000233156	human	ensembl	74_37	-1	known	missense	c.406	p.G136S	1.000	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	TFPI	HGNC	ENSG00000003436	tier1	-	-	71	0	0.00	75	72	48.98	98	0	0.00	65	61	48.41
AEBP1	0	genome.wustl.edu	37	7	44153323	44153323	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	7	44153323	44153323	C	A	SNP	AEBP1	ENST00000223357	human	ensembl	74_37	+1	known	missense	c.2940	p.F980L	0.997	superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	AEBP1	HGNC	ENSG00000106624	tier1	-	-	53	0	0.00	52	52	50.00	57	1	1.72	22	23	50.00
C20orf194	0	genome.wustl.edu	37	20	3276587	3276587	+	R	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	20	3276587	3276587	C	T	SNP	C20orf194	ENST00000498079	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	C20orf194	HGNC	ENSG00000088854	tier1	-	-	12	0	0.00	15	12	44.44	37	0	0.00	26	15	36.59
PTGS2	0	genome.wustl.edu	37	1	186648506	186648506	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	1	186648506	186648506	C	A	SNP	PTGS2	ENST00000367468	human	ensembl	74_37	-1	known	missense	c.117	p.Q39H	0.620	pfscan_EG-like_dom	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_EG-like_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	PTGS2	HGNC	ENSG00000073756	tier1	-	-	35	0	0.00	98	38	27.94	136	0	0.00	182	77	29.73
BBS4	0	genome.wustl.edu	37	15	73022025	73022025	+	Silent	SNP	G	G	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	15	73022025	73022025	G	A	SNP	BBS4	ENST00000395205	human	ensembl	74_37	+1	known	silent	c.735	p.K245	1.000	pfscan_TPR-contain_dom	pfam_TPR_2,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	BBS4	HGNC	ENSG00000140463	tier1	-	-	71	0	0.00	92	58	38.67	81	0	0.00	55	37	40.22
TUBAL3	0	genome.wustl.edu	37	10	5436364	5436364	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	10	5436364	5436364	C	T	SNP	TUBAL3	ENST00000380419	human	ensembl	74_37	-1	known	missense	c.457	p.G153S	0.996	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBAL3	HGNC	ENSG00000178462	tier1	-	-	29	0	0.00	57	16	21.92	106	1	0.93	112	27	19.29
TRPA1	0	genome.wustl.edu	37	8	72952031	72952031	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	8	72952031	72952031	G	A	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	missense	c.2063	p.A688V	1.000	NULL	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321	tier1	-	-	28	0	0.00	24	8	25.00	111	0	0.00	75	47	38.21
DENND4A	0	genome.wustl.edu	37	15	65982790	65982790	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	15	65982790	65982790	C	T	SNP	DENND4A	ENST00000443035	human	ensembl	74_37	-1	known	nonsense	c.4139	p.W1380*	1.000	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,tigrfam_Pentatricopeptide_repeat	-	no_errors	DENND4A	HGNC	ENSG00000174485	tier1	-	-	154	0	0.00	184	139	43.03	134	0	0.00	66	75	53.19
F13B	0	genome.wustl.edu	37	1	197024914	197024914	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	1	197024914	197024914	A	G	SNP	F13B	ENST00000367412	human	ensembl	74_37	-1	known	missense	c.1285	p.Y429H	0.434	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	F13B	HGNC	ENSG00000143278	tier1	rs201427054	-	28	0	0.00	52	26	33.33	102	0	0.00	79	41	34.17
AP3B2	0	genome.wustl.edu	37	15	83328314	83328314	+	Nonstop_Mutation	SNP	A	A	C			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	15	83328314	83328314	A	C	SNP	AP3B2	ENST00000261722	human	ensembl	74_37	-1	known	nonstop	c.3247	p.*1083G	1.000	NULL	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,pirsf_AP3_beta	-	no_errors	AP3B2	HGNC	ENSG00000103723	tier1	-	-	36	0	0.00	50	52	50.98	75	1	1.32	48	40	44.94
RFPL3	0	genome.wustl.edu	37	22	32754084	32754084	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	22	32754084	32754084	C	A	SNP	RFPL3	ENST00000249007	human	ensembl	74_37	+1	known	missense	c.26	p.T9N	0.003	NULL	pfam_RDM_domain_RFPL,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RFPL3	HGNC	ENSG00000128276	tier1	-	-	121	0	0.00	149	103	40.87	71	0	0.00	40	39	49.37
FABP1	0	genome.wustl.edu	37	2	88423901	88423901	+	R	SNP	G	G	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	2	88423901	88423901	G	A	SNP	FABP1	ENST00000495375	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FABP1	HGNC	ENSG00000163586	tier1	-	-	31	0	0.00	35	38	52.05	60	0	0.00	39	42	51.85
ZCCHC18	0	genome.wustl.edu	37	X	103360279	103360279	+	R	SNP	T	T	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	X	103360279	103360279	T	A	SNP	ZCCHC18	ENST00000422784	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZCCHC18	HGNC	ENSG00000166707	tier1	-	-	64	0	0.00	84	67	44.37	123	0	0.00	91	44	32.59
LRRIQ3	0	genome.wustl.edu	37	1	74648303	74648303	+	Silent	SNP	T	T	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	1	74648303	74648303	T	A	SNP	LRRIQ3	ENST00000354431	human	ensembl	74_37	-1	known	silent	c.492	p.I164	0.990	NULL	pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ3	HGNC	ENSG00000162620	tier1	-	-	63	0	0.00	87	55	38.73	63	0	0.00	43	36	45.57
NEFM	0	genome.wustl.edu	37	8	24774755	24774755	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	8	24774755	24774755	G	T	SNP	NEFM	ENST00000221166	human	ensembl	74_37	+1	known	nonsense	c.1387	p.E463*	1.000	NULL	pfam_IF,pfam_Intermed_filament_D-bd,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	NEFM	HGNC	ENSG00000104722	tier1	-	-	31	0	0.00	33	30	47.62	124	0	0.00	73	40	35.40
ATRNL1	0	genome.wustl.edu	37	10	117059564	117059564	+	Silent	SNP	C	C	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	10	117059564	117059564	C	A	SNP	ATRNL1	ENST00000355044	human	ensembl	74_37	+1	known	silent	c.2436	p.G812	1.000	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_Kelch_1,pfam_Kelch_2,pfam_Plexin_repeat,pfam_CUB_dom,pfam_EGF_extracell,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRNL1	HGNC	ENSG00000107518	tier1	-	-	81	0	0.00	10	68	87.18	137	0	0.00	19	64	77.11
RAET1K	0	genome.wustl.edu	37	6	150322718	150322718	+	R	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	6	150322718	150322718	C	T	SNP	RAET1K	ENST00000533735	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RAET1K	HGNC	ENSG00000218358	tier1	-	-	124	0	0.00	133	107	44.58	49	0	0.00	34	29	46.03
DLG3	0	genome.wustl.edu	37	X	69699100	69699100	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	X	69699100	69699100	G	T	SNP	DLG3	ENST00000194900	human	ensembl	74_37	+1	known	missense	c.1560	p.R520S	1.000	superfamily_SH3_domain,pirsf_M-assoc_guanylate_kinase,pfscan_SH3_domain	pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_PDZ_assoc,pfam_MAGUK_PEST_N,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG3	HGNC	ENSG00000082458	tier1	-	-	87	0	0.00	67	56	45.16	127	0	0.00	58	63	52.07
FRMPD3	0	genome.wustl.edu	37	X	106803532	106803532	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	X	106803532	106803532	C	G	SNP	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	missense	c.907	p.P303A	1.000	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234	tier1	-	-	27	0	0.00	36	25	40.98	91	0	0.00	59	36	37.89
STAB2	0	genome.wustl.edu	37	12	104054498	104054498	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	12	104054498	104054498	G	C	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	missense	c.1826	p.R609T	0.827	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pfscan_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011	tier1	-	-	75	0	0.00	74	57	43.51	120	0	0.00	81	54	40.00
DNHD1	0	genome.wustl.edu	37	11	6569107	6569107	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	11	6569107	6569107	A	G	SNP	DNHD1	ENST00000254579	human	ensembl	74_37	+1	known	missense	c.6742	p.S2248G	0.000	NULL	pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom,superfamily_P-loop_NTPase,superfamily_t-SRE	-	no_errors	DNHD1	HGNC	ENSG00000179532	tier1	-	-	55	0	0.00	4	29	87.88	126	0	0.00	13	61	82.43
GIMAP6	0	genome.wustl.edu	37	7	150325422	150325422	+	Silent	SNP	C	C	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	7	150325422	150325422	C	A	SNP	GIMAP6	ENST00000328902	human	ensembl	74_37	-1	known	silent	c.264	p.G88	0.008	pfam_AIG1,superfamily_P-loop_NTPase	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP6	HGNC	ENSG00000133561	tier1	-	-	51	0	0.00	46	45	49.45	117	0	0.00	64	49	43.36
EB1BP2	0	genome.wustl.edu	37	1	43637075	43637075	+	R	SNP	C	C	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	1	43637075	43637075	C	A	SNP	EB1BP2	ENST00000472982	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	EB1BP2	HGNC	ENSG00000117395	tier1	-	-	14	0	0.00	20	16	44.44	138	0	0.00	51	53	50.96
PLS3	0	genome.wustl.edu	37	X	114863597	114863597	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	X	114863597	114863597	A	T	SNP	PLS3	ENST00000355899	human	ensembl	74_37	+1	known	missense	c.325	p.T109S	1.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_EF_hand_dom,smart_CH-domain,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	PLS3	HGNC	ENSG00000102024	tier1	-	-	53	0	0.00	67	51	43.22	140	0	0.00	96	97	50.00
TSHZ2	0	genome.wustl.edu	37	20	51870593	51870593	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	20	51870593	51870593	G	A	SNP	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	missense	c.596	p.R199Q	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463	tier1	rs139565246	-	51	0	0.00	47	59	55.66	65	0	0.00	42	48	53.33
ZAN	0	genome.wustl.edu	37	7	100364861	100364861	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	7	100364861	100364861	T	C	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.4841	p.L1614P	0.774	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1	-	-	62	0	0.00	51	36	41.38	71	0	0.00	32	30	48.39
SYNCRIP	0	genome.wustl.edu	37	6	86333723	86333723	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	6	86333723	86333723	C	G	SNP	SYNCRIP	ENST00000369622	human	ensembl	74_37	-1	known	missense	c.774	p.Q258H	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	SYNCRIP	HGNC	ENSG00000135316	tier1	-	-	55	0	0.00	61	55	47.41	114	0	0.00	68	44	38.94
PCDH19	0	genome.wustl.edu	37	X	99662489	99662489	+	Silent	SNP	G	G	C			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	X	99662489	99662489	G	C	SNP	PCDH19	ENST00000373034	human	ensembl	74_37	-1	known	silent	c.1107	p.A369	0.312	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH19	HGNC	ENSG00000165194	tier1	-	-	24	0	0.00	39	22	36.07	23	0	0.00	13	7	35.00
PRKD3	0	genome.wustl.edu	37	2	37483997	37483997	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	2	37483997	37483997	C	T	SNP	PRKD3	ENST00000234179	human	ensembl	74_37	-1	known	missense	c.2221	p.A741T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD3	HGNC	ENSG00000115825	tier1	-	-	56	0	0.00	51	56	52.34	142	0	0.00	67	65	49.24
PLX2	0	genome.wustl.edu	37	1	208200207	208200207	+	R	SNP	T	T	C			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	1	208200207	208200207	T	C	SNP	PLX2	ENST00000483048	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.866	-	-	-	no_errors	PLX2	HGNC	ENSG00000076356	tier1	-	-	106	0	0.00	292	130	30.81	109	0	0.00	106	72	40.45
APOB	0	genome.wustl.edu	37	2	21231998	21231998	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	2	21231998	21231998	A	T	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.7742	p.V2581E	0.991	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	21	0	0.00	1	22	88.00	109	0	0.00	11	54	83.08
CD163	0	genome.wustl.edu	37	12	7640492	7640492	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	12	7640492	7640492	C	A	SNP	CD163	ENST00000359156	human	ensembl	74_37	-1	known	nonsense	c.1612	p.G538*	0.979	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	CD163	HGNC	ENSG00000177575	tier1	-	-	78	0	0.00	66	71	51.82	90	0	0.00	49	28	36.36
IKZF3	0	genome.wustl.edu	37	17	37922593	37922593	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	17	37922593	37922593	G	A	SNP	IKZF3	ENST00000346872	human	ensembl	74_37	-1	known	missense	c.980	p.P327L	0.998	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF3	HGNC	ENSG00000161405	tier1	-	-	46	0	0.00	46	41	47.13	51	0	0.00	22	19	46.34
PCDHB13	0	genome.wustl.edu	37	5	140595974	140595974	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	5	140595974	140595974	G	T	SNP	PCDHB13	ENST00000341948	human	ensembl	74_37	+1	known	missense	c.2279	p.G760V	0.015	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB13	HGNC	ENSG00000187372	tier1	-	-	134	0	0.00	141	103	42.21	24	0	0.00	24	18	42.86
GEMIN5	0	genome.wustl.edu	37	5	154282137	154282137	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	5	154282137	154282137	C	T	SNP	GEMIN5	ENST00000285873	human	ensembl	74_37	-1	known	missense	c.2828	p.G943E	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	GEMIN5	HGNC	ENSG00000082516	tier1	-	-	54	0	0.00	43	40	48.19	60	0	0.00	40	42	51.22
UGT1A5	0	genome.wustl.edu	37	2	234621847	234621847	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	2	234621847	234621847	A	C	SNP	UGT1A5	ENST00000373414	human	ensembl	74_37	+1	known	missense	c.210	p.K70N	0.005	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A5	HGNC	ENSG00000240224	tier1	-	-	63	0	0.00	74	58	43.94	83	0	0.00	55	34	38.20
ZP4	0	genome.wustl.edu	37	1	238048788	238048788	+	Silent	SNP	T	T	G			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	1	238048788	238048788	T	G	SNP	ZP4	ENST00000366570	human	ensembl	74_37	-1	known	silent	c.1063	p.R355	0.844	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	ZP4	HGNC	ENSG00000116996	tier1	-	-	57	0	0.00	121	42	25.77	75	0	0.00	113	53	31.93
CHDC2	0	genome.wustl.edu	37	X	36117934	36117934	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	X	36117934	36117934	A	G	SNP	CHDC2	ENST00000313548	human	ensembl	74_37	+1	known	missense	c.790	p.M264V	0.003	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain	-	no_errors	CHDC2	HGNC	ENSG00000176034	tier1	-	-	103	0	0.00	109	102	48.11	143	0	0.00	84	47	35.88
APOB	0	genome.wustl.edu	37	2	21231996	21231996	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	2	21231996	21231996	C	-	DEL	APOB	ENST00000233242	human	ensembl	74_37	-1	known	frame_shift_del	c.7744	p.E2582fs	1.000	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1			21	0	0.00	3	21	87.50	107	0	0.00	13	52	80.00
MEST	0	genome.wustl.edu	37	7	130140375	130140375	+	Splice_Site	DEL	T	T	-			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T	T	-	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	7	130140375	130140375	T	-	DEL	MEST	ENST00000223215	human	ensembl	74_37	+1	known	splice_site_del	c.647+2	e8+2	1.000	-	-	-	no_errors	MEST	HGNC	ENSG00000106484	tier1			46	0	0.00	57	42	42.42	79	0	0.00	54	29	34.94
PKHD1L1	0	genome.wustl.edu	37	8	110499030	110499030	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	A	A	A	-	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	8	110499030	110499030	A	-	DEL	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	frame_shift_del	c.9860	p.N3288fs	0.077	superfamily_Pectin_lyase_fold/virulence	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1			82	0	0.00	100	82	45.05	95	0	0.00	49	56	53.33
DEFB107A	0	genome.wustl.edu	37	8	7673081	7673081	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	8	7673081	7673081	C	T	SNP	DEFB107A	ENST00000335021	human	ensembl	74_37	-1	known	missense	c.70	p.A24T	0.998	NULL	NULL	-	no_errors	DEFB107A	HGNC	ENSG00000186572	tier1	-	-	54	0	0.00	95	15	13.64	10	0	0.00	7	2	22.22
MBL1P	0	genome.wustl.edu	37	10	81680246	81680246	+	R	SNP	A	A	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	10	81680246	81680246	A	T	SNP	MBL1P	ENST00000480805	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	MBL1P	HGNC	ENSG00000242600	tier1	-	-	64	0	0.00	12	59	81.94	87	0	0.00	4	44	91.67
TNF	0	genome.wustl.edu	37	6	31543603	31543603	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	6	31543603	31543603	C	T	SNP	TNF	ENST00000449264	human	ensembl	74_37	+1	known	missense	c.85	p.R29W	0.008	prints_TNF_alpha	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom,prints_TNF_alpha,prints_TNF	-	no_errors	TNF	HGNC	ENSG00000232810	tier1	-	-	57	0	0.00	7	44	86.27	22	0	0.00	6	10	62.50
TP53	0	genome.wustl.edu	37	17	7578457	7578457	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	17	7578457	7578457	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.473	p.R158H	0.989	pfam_p53_D-bd,superfamily_p53-like_TF_D-bd,prints_p53_tumour_suppressor	pfam_p53_D-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_D-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	31	0	0.00	9	36	80.00	57	0	0.00	1	30	96.77
TRIM21	0	genome.wustl.edu	37	11	4409555	4409555	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	11	4409555	4409555	T	C	SNP	TRIM21	ENST00000254436	human	ensembl	74_37	-1	known	missense	c.710	p.H237R	0.016	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Ubox_domain,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin,prints_Znf_B-box_chordata	-	no_errors	TRIM21	HGNC	ENSG00000132109	tier1	-	-	46	0	0.00	11	41	78.85	45	0	0.00	5	19	79.17
TTC40	0	genome.wustl.edu	37	10	134755529	134755529	+	Silent	SNP	G	G	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	10	134755529	134755529	G	A	SNP	TTC40	ENST00000368582	human	ensembl	74_37	-1	known	silent	c.129	p.S43	1.000	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	tier1	-	-	70	0	0.00	15	45	75.00	97	0	0.00	5	54	91.53
SLC5A4	0	genome.wustl.edu	37	22	32617002	32617002	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	22	32617002	32617002	C	A	SNP	SLC5A4	ENST00000266086	human	ensembl	74_37	-1	known	missense	c.1673	p.R558L	0.999	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A4	HGNC	ENSG00000100191	tier1	-	-	87	0	0.00	143	14	8.92	101	0	0.00	107	10	8.55
PRKDC	0	genome.wustl.edu	37	8	48746783	48746783	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	8	48746783	48746783	C	T	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	missense	c.8123	p.G2708E	0.962	NULL	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	117	0	0.00	233	22	8.63	84	0	0.00	122	12	8.96
RIMS1	0	genome.wustl.edu	37	6	73043425	73043425	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	6	73043425	73043425	C	G	SNP	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	missense	c.4253	p.T1418R	1.000	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841	tier1	-	-	59	0	0.00	97	11	10.19	102	0	0.00	115	9	7.26
FOXO4	0	genome.wustl.edu	37	X	70320816	70320816	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	X	70320816	70320816	A	G	SNP	FOXO4	ENST00000374259	human	ensembl	74_37	+1	known	missense	c.736	p.N246D	0.990	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXO4	HGNC	ENSG00000184481	tier1	-	-	41	0	0.00	87	10	10.20	74	1	1.33	75	8	9.64
DUSP12	0	genome.wustl.edu	37	1	161726620	161726639	+	Frame_Shift_Del	DEL	GTATGGTGAACAGTGCTCTT	GTATGGTGAACAGTGCTCTT	-			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	GTATGGTGAACAGTGCTCTT	GTATGGTGAACAGTGCTCTT	GTATGGTGAACAGTGCTCTT	-	GTATGGTGAACAGTGCTCTT	GTATGGTGAACAGTGCTCTT	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	1	161726620	161726639	GTATGGTGAACAGTGCTCTT	-	DEL	DUSP12	ENST00000367943	human	ensembl	74_37	+1	known	frame_shift_del	c.906_925	p.Y303fs	1.000:1.000:1.000:1.000:1.000:1.000:0.997:1.000:1.000:0.997:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.996:0.000:0.951	pirsf_DUSP12	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_DUSP12,pfscan_Znf_C2H2,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	DUSP12	HGNC	ENSG00000081721	tier1			149	0	0.00	171	8	4.47	149	0	0.00	171	8	4.47
SRL	0	genome.wustl.edu	37	16	4257305	4257305	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	16	4257305	4257305	C	T	SNP	SRL	ENST00000572111	human	ensembl	74_37	-1	known	missense	c.862	p.A288T	0.000	NULL	NULL	-	no_errors	SRL	HGNC	ENSG00000185739	tier1	-	-	27	0	0.00	41	41	50.00	35	1	2.78	24	11	31.43
AR	0	genome.wustl.edu	37	X	66765155	66765155	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	X	66765155	66765155	T	A	SNP	AR	ENST00000374690	human	ensembl	74_37	+1	known	missense	c.167	p.L56Q	0.942	pfam_Andrgn_rcpt	pfam_Andrgn_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Andrgn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	AR	HGNC	ENSG00000169083	tier1	-	-	57	0	0.00	70	7	9.09	6	0	0.00	4	0	0.00
ENSG00000256616	0	genome.wustl.edu	37	18	12076541	12076542	+	R	INS	-	-	CGCCGCCGCCGC			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	18	12076541	12076542	-	CGCCGCCGCCGC	INS	ENSG00000256616	ENST00000591780	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.834:0.844	-	-	-	no_errors	RP11-815J4.6	Clone_based_vega_gene	ENSG00000256616	tier1			0	0	0.00	0	0	0.00	0	0	0.00	0	0	0.00
ENSG00000270726	0	genome.wustl.edu	37	X	155252987	155252988	+	R	INS	-	-	CAGCACCAC			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	X	155252987	155252988	-	CAGCACCAC	INS	ENSG00000270726	ENST00000285718	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.959:1.000	-	-	-	no_errors	AJ271736.10	Clone_based_vega_gene	ENSG00000270726	tier1			0	0	0.00	0	1	100.00	0	0	0.00	0	1	100.00
GOLGA6L6	0	genome.wustl.edu	37	15	20739541	20739541	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	15	20739541	20739541	C	A	SNP	GOLGA6L6	ENST00000427390	human	ensembl	74_37	-1	known	nonsense	c.2209	p.E737*	0.002	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	GOLGA6L6	HGNC	ENSG00000215405	tier1	-	-	27	0	0.00	35	24	40.68	0	0	0.00	0	0	0.00
PCNT	0	genome.wustl.edu	37	21	47848501	47848501	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	21	47848501	47848501	C	T	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	nonsense	c.7687	p.Q2563*	1.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	tier1	-	-	12	0	0.00	10	11	52.38	3	0	0.00	3	2	40.00
RNF212	0	genome.wustl.edu	37	4	1087327	1087328	+	In_Frame_Ins	INS	-	-	CTGCCCAGGCTGGAGCCAGCC			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	4	1087327	1087328	-	CTGCCCAGGCTGGAGCCAGCC	INS	RNF212	ENST00000333673	human	ensembl	74_37	-1	known	in_frame_ins	c.722_721	p.S241in_frame_insWLAPAWAA	0.085:0.000	NULL	pfscan_Znf_RING	-	no_errors	RNF212	HGNC	ENSG00000178222	tier1			2	0	0.00	7	4	36.36	2	0	0.00	7	4	36.36
ENSG00000223697	0	genome.wustl.edu	37	8	133854714	133854715	+	R	INS	-	-	T			TCGA-DX-A48O-01A-11D-A307-09	TCGA-DX-A48O-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6e58860a-9757-4492-9d72-d8c3cfec34f4	8d3565e0-e65b-4328-bdf5-e1424e9d0ba8	8	133854714	133854715	-	T	INS	ENSG00000223697	ENST00000608375	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014:0.003	-	-	-	no_errors	AF230666.2	Clone_based_vega_gene	ENSG00000223697	tier1			24	0	0.00	42	5	10.64	48	0	0.00	64	2	3.03