Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID STK31 56164 hgsc.bcm.edu 36 7 23769052 23769052 + Silent SNP C C G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ZNF804B 219578 hgsc.bcm.edu 36 7 88801578 88801578 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CDK14 0 hgsc.bcm.edu 36 7 90422991 90422991 + Silent SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 SRPK2 6733 hgsc.bcm.edu 36 7 104570845 104570845 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 RINT1 60561 hgsc.bcm.edu 36 7 104970210 104970210 + Missense_Mutation SNP T T G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MET 8731 hgsc.bcm.edu 36 7 116204718 116204718 + Missense_Mutation SNP A A T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CPA1 1357 hgsc.bcm.edu 36 7 129808888 129808888 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CNTNAP2 26047 hgsc.bcm.edu 36 7 146167802 146167802 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 SALL4 57167 hgsc.bcm.edu 36 20 49852235 49852235 + Silent SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ZFP64 55734 hgsc.bcm.edu 36 20 50134551 50134551 + Silent SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ZNF217 7764 hgsc.bcm.edu 36 20 51632422 51632422 + Silent SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CABLES2 81928 hgsc.bcm.edu 36 20 60400884 60400884 + Missense_Mutation SNP C C A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 GAB4 128954 hgsc.bcm.edu 36 22 15825730 15825730 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CRYBB1 1414 hgsc.bcm.edu 36 22 25338120 25338120 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ARHGAP5 394 hgsc.bcm.edu 36 14 31631047 31631047 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 RALGAPA1 0 hgsc.bcm.edu 36 14 35174433 35174433 + Silent SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PTGDR 5729 hgsc.bcm.edu 36 14 51804538 51804538 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CREB3L3 84699 hgsc.bcm.edu 36 19 4122675 4122675 + Silent SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 OR7A5 26659 hgsc.bcm.edu 36 19 14799248 14799248 + Missense_Mutation SNP T T A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CEACAM1 634 hgsc.bcm.edu 36 19 47717319 47717319 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 LIG1 26018 hgsc.bcm.edu 36 19 53348953 53348953 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ESCO2 157570 hgsc.bcm.edu 36 8 27690183 27690183 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CNGB3 54714 hgsc.bcm.edu 36 8 87807894 87807894 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 SLC26A7 115111 hgsc.bcm.edu 36 8 92370546 92370546 + Missense_Mutation SNP C C A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CDK11B 0 hgsc.bcm.edu 36 1 1643000 1643000 + Missense_Mutation SNP C C A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PTCHD2 57540 hgsc.bcm.edu 36 1 11502432 11502432 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PRAMEF12 390999 hgsc.bcm.edu 36 1 12758274 12758274 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 RPL11 6135 hgsc.bcm.edu 36 1 23893858 23893858 + Missense_Mutation SNP A A T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MACF1 23499 hgsc.bcm.edu 36 1 39677659 39677659 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 HECTD3 79654 hgsc.bcm.edu 36 1 45247938 45247938 + Missense_Mutation SNP T T G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CCDC18 343099 hgsc.bcm.edu 36 1 93453031 93453031 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 HIST2H2AC 8338 hgsc.bcm.edu 36 1 148125222 148125222 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ZNF648 127665 hgsc.bcm.edu 36 1 180292175 180292175 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CDC73 79577 hgsc.bcm.edu 36 1 191360893 191360893 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PTPRC 5788 hgsc.bcm.edu 36 1 196935442 196935442 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 GREM2 64388 hgsc.bcm.edu 36 1 238723175 238723175 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 KMO 8564 hgsc.bcm.edu 36 1 239819973 239819973 + Missense_Mutation SNP C C G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CHML 1122 hgsc.bcm.edu 36 1 239864151 239864151 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 WDR64 128025 hgsc.bcm.edu 36 1 239901043 239901043 + Silent SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 OR2M4 26245 hgsc.bcm.edu 36 1 246469653 246469653 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 OR10A5 144124 hgsc.bcm.edu 36 11 6824125 6824125 + Silent SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ANO5 203859 hgsc.bcm.edu 36 11 22250960 22250960 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 OR5B2 390190 hgsc.bcm.edu 36 11 57946623 57946623 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 LGALS12 85329 hgsc.bcm.edu 36 11 63035860 63035860 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 FAT3 120114 hgsc.bcm.edu 36 11 92134832 92134832 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 FAT3 120114 hgsc.bcm.edu 36 11 92134833 92134833 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CNTN5 53942 hgsc.bcm.edu 36 11 99292003 99292003 + Silent SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 DNAH8 1769 hgsc.bcm.edu 36 6 38948394 38948394 + Silent SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 DNAH8 1769 hgsc.bcm.edu 36 6 38959736 38959736 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 DST 667 hgsc.bcm.edu 36 6 56465183 56465183 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 FYN 2534 hgsc.bcm.edu 36 6 112147861 112147861 + Silent SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 LPA 4018 hgsc.bcm.edu 36 6 160897178 160897178 + Silent SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 DLL1 28514 hgsc.bcm.edu 36 6 170434595 170434595 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 TP53 7157 hgsc.bcm.edu 36 17 7517831 7517831 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 TP53 7157 hgsc.bcm.edu 36 17 7517848 7517848 + Missense_Mutation SNP A A C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 TP53 7157 hgsc.bcm.edu 36 17 7518232 7518232 + Silent SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MYH8 4626 hgsc.bcm.edu 36 17 10243636 10243636 + Silent SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MAP2K4 6416 hgsc.bcm.edu 36 17 11973218 11973218 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 NF1 4763 hgsc.bcm.edu 36 17 26580525 26580525 + Silent SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 IKZF3 22806 hgsc.bcm.edu 36 17 35176060 35176060 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 KLHL10 317719 hgsc.bcm.edu 36 17 37251791 37251791 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 DNAH17 8632 hgsc.bcm.edu 36 17 73998500 73998500 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 RBM11 54033 hgsc.bcm.edu 36 21 14521379 14521379 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CREBBP 1387 hgsc.bcm.edu 36 16 3726764 3726764 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ACSM1 116285 hgsc.bcm.edu 36 16 20609895 20609895 + Silent SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 NAE1 8883 hgsc.bcm.edu 36 16 65400417 65400417 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 TXNL4B 54957 hgsc.bcm.edu 36 16 70678144 70678144 + Silent SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 SMAD4 4089 hgsc.bcm.edu 36 18 46845836 46845836 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ATP8B1 5205 hgsc.bcm.edu 36 18 53489739 53489739 + Nonsense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 VHL 7428 hgsc.bcm.edu 36 3 10163212 10163212 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ZNF197 10168 hgsc.bcm.edu 36 3 44645732 44645732 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PLXND1 23129 hgsc.bcm.edu 36 3 130787498 130787498 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 COL6A5 256076 hgsc.bcm.edu 36 3 131592776 131592776 + Missense_Mutation SNP A A C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PIK3CA 5290 hgsc.bcm.edu 36 3 180405059 180405059 + Silent SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MAGOHB 55110 hgsc.bcm.edu 36 12 10650231 10650231 + Silent SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 SOX5 6660 hgsc.bcm.edu 36 12 23890301 23890301 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 KRAS 3845 hgsc.bcm.edu 36 12 25289551 25289551 + Missense_Mutation SNP C C G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 DIP2B 57609 hgsc.bcm.edu 36 12 49403345 49403345 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 C12orf26 84190 hgsc.bcm.edu 36 12 81321025 81321025 + Missense_Mutation SNP G G C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 NAA25 0 hgsc.bcm.edu 36 12 111000886 111000886 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 UBC 7316 hgsc.bcm.edu 36 12 123963649 123963649 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 NEDD4 4734 hgsc.bcm.edu 36 15 53994921 53994921 + Silent SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 IGF1R 3480 hgsc.bcm.edu 36 15 97290400 97290400 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 TLR7 51284 hgsc.bcm.edu 36 X 12813977 12813977 + Silent SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 YY2 404281 hgsc.bcm.edu 36 X 21784831 21784831 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ZNF41 7592 hgsc.bcm.edu 36 X 47200327 47200327 + Missense_Mutation SNP T T G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ARMCX2 9823 hgsc.bcm.edu 36 X 100798152 100798152 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PLP1 5354 hgsc.bcm.edu 36 X 102928269 102928269 + Silent SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 GRIA3 2892 hgsc.bcm.edu 36 X 122444443 122444443 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ACTRT1 139741 hgsc.bcm.edu 36 X 127013245 127013245 + Missense_Mutation SNP T T A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 GPR101 83550 hgsc.bcm.edu 36 X 135940734 135940734 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ZBTB49 0 hgsc.bcm.edu 36 4 4354688 4354688 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PROM1 8842 hgsc.bcm.edu 36 4 15603084 15603084 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ANAPC4 29945 hgsc.bcm.edu 36 4 25001689 25001689 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PDS5A 23244 hgsc.bcm.edu 36 4 39516186 39516186 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CDS1 11200 hgsc.bcm.edu 36 4 85779141 85779141 + Missense_Mutation SNP T T G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 EMCN 51705 hgsc.bcm.edu 36 4 101620207 101620207 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 NRXN1 9378 hgsc.bcm.edu 36 2 50704194 50704194 + Missense_Mutation SNP T T A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CCDC88A 55704 hgsc.bcm.edu 36 2 55389611 55389611 + Missense_Mutation SNP C C A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 SEMA4F 10505 hgsc.bcm.edu 36 2 74754331 74754331 + Silent SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 IL1RL2 8808 hgsc.bcm.edu 36 2 102172134 102172134 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MERTK 10461 hgsc.bcm.edu 36 2 112457038 112457038 + Silent SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 WDR33 55339 hgsc.bcm.edu 36 2 128199114 128199114 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 XIRP2 129446 hgsc.bcm.edu 36 2 167808450 167808450 + Silent SNP A A C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 XIRP2 129446 hgsc.bcm.edu 36 2 167813491 167813491 + Missense_Mutation SNP C C A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PRKRA 8575 hgsc.bcm.edu 36 2 179005152 179005152 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 TTN 7273 hgsc.bcm.edu 36 2 179180492 179180492 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CALCRL 10203 hgsc.bcm.edu 36 2 187925270 187925270 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 FN1 2335 hgsc.bcm.edu 36 2 216006366 216006366 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 TNS1 7145 hgsc.bcm.edu 36 2 218421697 218421697 + Silent SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 SCG2 7857 hgsc.bcm.edu 36 2 224170858 224170858 + Missense_Mutation SNP G G C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 SH3BP4 23677 hgsc.bcm.edu 36 2 235614804 235614804 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ILKAP 80895 hgsc.bcm.edu 36 2 238755559 238755559 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 JAK2 3717 hgsc.bcm.edu 36 9 5012143 5012143 + Silent SNP A A T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PLAA 9373 hgsc.bcm.edu 36 9 26896045 26896045 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 UBAP2 55833 hgsc.bcm.edu 36 9 33917851 33917851 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 C9orf174 0 hgsc.bcm.edu 36 9 99145600 99145600 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MUSK 4593 hgsc.bcm.edu 36 9 112603039 112603039 + Nonsense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ATP6V1G1 9550 hgsc.bcm.edu 36 9 116394686 116394686 + Missense_Mutation SNP A A C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 DBC1 57805 hgsc.bcm.edu 36 9 120969784 120969784 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 TRAF1 7185 hgsc.bcm.edu 36 9 122707169 122707169 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 C13orf23 80209 hgsc.bcm.edu 36 13 38485390 38485390 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 RB1 5925 hgsc.bcm.edu 36 13 47779512 47779512 + Nonsense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 UGGT2 0 hgsc.bcm.edu 36 13 95334928 95334928 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ATP5C1 509 hgsc.bcm.edu 36 10 7884763 7884763 + Missense_Mutation SNP G G A novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 UPF2 26019 hgsc.bcm.edu 36 10 12061106 12061106 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MLLT10 8028 hgsc.bcm.edu 36 10 22056863 22056863 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 PTEN 5728 hgsc.bcm.edu 36 10 89643799 89643799 + Silent SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 GBF1 80142 hgsc.bcm.edu 36 10 104129142 104129142 + Missense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 KIAA0947 23379 hgsc.bcm.edu 36 5 5517067 5517067 + Silent SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CAMK4 814 hgsc.bcm.edu 36 5 110758369 110758369 + Missense_Mutation SNP A A G novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 APC 324 hgsc.bcm.edu 36 5 112203202 112203202 + Nonsense_Mutation SNP C C T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MCC 4163 hgsc.bcm.edu 36 5 112514990 112514990 + Missense_Mutation SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MGAT4B 11282 hgsc.bcm.edu 36 5 179159178 179159178 + Missense_Mutation SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ROS1 6098 hgsc.bcm.edu 36 6 117772120 117772120 + Splice_Site SNP T T C novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 CHD9 80205 hgsc.bcm.edu 36 16 51859339 51859339 + Splice_Site SNP G G T novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 COL6A5 256076 hgsc.bcm.edu 36 3 131592770 131592770 + Frame_Shift_Del DEL A A - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MUC4 4585 hgsc.bcm.edu 36 3 196990687 196990734 + In_Frame_Del DEL GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 FNDC1 84624 hgsc.bcm.edu 36 6 159580770 159580787 + In_Frame_Del DEL CCACCACCCGCCGCACGA CCACCACCCGCCGCACGA - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 CCACCACCCGCCGCACGA CCACCACCCGCCGCACGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 RTKN2 219790 hgsc.bcm.edu 36 10 63646919 63646924 + In_Frame_Del DEL AGCTTC AGCTTC - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 AGCTTC AGCTTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 REEP3 221035 hgsc.bcm.edu 36 10 65027878 65027878 + Frame_Shift_Del DEL T T - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 MUC2 4583 hgsc.bcm.edu 36 11 1082816 1082818 + In_Frame_Del DEL GGT GGT - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 GGT GGT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 WNK1 65125 hgsc.bcm.edu 36 12 840558 840558 + Frame_Shift_Del DEL A A - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 NACA 4666 hgsc.bcm.edu 36 12 55397787 55397855 + In_Frame_Del DEL GTGGGGGCCCCTTTGGGGGGTGGGGTAGCTGGGCCTCCTTTTGGGGAGGGAGGAGTTGCAGCTGGGGTT GTGGGGGCCCCTTTGGGGGGTGGGGTAGCTGGGCCTCCTTTTGGGGAGGGAGGAGTTGCAGCTGGGGTT - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 GTGGGGGCCCCTTTGGGGGGTGGGGTAGCTGGGCCTCCTTTTGGGGAGGGAGGAGTTGCAGCTGGGGTT GTGGGGGCCCCTTTGGGGGGTGGGGTAGCTGGGCCTCCTTTTGGGGAGGGAGGAGTTGCAGCTGGGGTT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 ATXN3 4287 hgsc.bcm.edu 36 14 91607107 91607109 + In_Frame_Del DEL CCT CCT - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 CCT CCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 KRTAP4-3 85290 hgsc.bcm.edu 36 17 36577755 36577756 + In_Frame_Ins INS - - GCAGCAGGTGGTCAG novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 DEFB126 81623 hgsc.bcm.edu 36 20 74311 74312 + Frame_Shift_Del DEL CC CC - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 CC CC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278 SLITRK2 84631 hgsc.bcm.edu 36 X 144712341 144712347 + Frame_Shift_Del DEL GTTTTTG GTTTTTG - novel unknown TCGA-F5-6812-01A-11D-1826-10 TCGA-F5-6812-10A-01D-1826-10 GTTTTTG GTTTTTG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 5e34fd1b-3d8a-4c61-afaf-3889c5004655 480fe73e-fe48-4e8d-81f2-b557b2373278