Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID NEUROD6 63974 hgsc.bcm.edu 36 7 31345240 31345240 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 AMPH 273 hgsc.bcm.edu 36 7 38500648 38500648 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 EGFR 1956 hgsc.bcm.edu 36 7 55216581 55216581 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SEMA3D 223117 hgsc.bcm.edu 36 7 84482362 84482362 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SAMD9L 219285 hgsc.bcm.edu 36 7 92598815 92598815 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CALCR 799 hgsc.bcm.edu 36 7 92893816 92893816 + Nonsense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TRIP6 7205 hgsc.bcm.edu 36 7 100308252 100308252 + Nonsense_Mutation SNP A A T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 NRCAM 4897 hgsc.bcm.edu 36 7 107604203 107604203 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CTTNBP2 83992 hgsc.bcm.edu 36 7 117219846 117219846 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZC3HAV1 56829 hgsc.bcm.edu 36 7 138413878 138413878 + Missense_Mutation SNP T T G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 BRAF 673 hgsc.bcm.edu 36 7 140146642 140146642 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PCNA 5111 hgsc.bcm.edu 36 20 5047470 5047470 + Silent SNP A A T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LRRN4 164312 hgsc.bcm.edu 36 20 5970178 5970178 + Silent SNP G G T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TM9SF4 9777 hgsc.bcm.edu 36 20 30193260 30193260 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ERGIC3 51614 hgsc.bcm.edu 36 20 33599676 33599676 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 BCAS1 8537 hgsc.bcm.edu 36 20 52078727 52078727 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 VAPB 9217 hgsc.bcm.edu 36 20 56426677 56426677 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ADORA2A 135 hgsc.bcm.edu 36 22 23166656 23166656 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 THOC5 8563 hgsc.bcm.edu 36 22 28251864 28251864 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SGSM3 27352 hgsc.bcm.edu 36 22 39132124 39132124 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PHF21B 112885 hgsc.bcm.edu 36 22 43691072 43691072 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MOV10L1 54456 hgsc.bcm.edu 36 22 48880154 48880154 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 OR4K5 79317 hgsc.bcm.edu 36 14 19458894 19458894 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CHD8 57680 hgsc.bcm.edu 36 14 20940064 20940064 + Silent SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SLC35F4 341880 hgsc.bcm.edu 36 14 57125774 57125774 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZFYVE26 23503 hgsc.bcm.edu 36 14 67338657 67338657 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ADAM20 8748 hgsc.bcm.edu 36 14 70059136 70059136 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SAMD15 0 hgsc.bcm.edu 36 14 76914827 76914827 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 REXO1 57455 hgsc.bcm.edu 36 19 1778578 1778578 + Nonsense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TMPRSS9 360200 hgsc.bcm.edu 36 19 2347635 2347635 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 XAB2 56949 hgsc.bcm.edu 36 19 7596922 7596922 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZNF490 57474 hgsc.bcm.edu 36 19 12552348 12552348 + Nonsense_Mutation SNP G G C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 AKAP8 10270 hgsc.bcm.edu 36 19 15330828 15330828 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZNF253 56242 hgsc.bcm.edu 36 19 19863521 19863521 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZNF626 199777 hgsc.bcm.edu 36 19 20599616 20599616 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TMEM91 641649 hgsc.bcm.edu 36 19 46576076 46576076 + Missense_Mutation SNP G G C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 BCL3 602 hgsc.bcm.edu 36 19 49954571 49954571 + Silent SNP C C A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GRIN2D 2906 hgsc.bcm.edu 36 19 53614306 53614306 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZNF547 284306 hgsc.bcm.edu 36 19 62580927 62580927 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZNF134 7693 hgsc.bcm.edu 36 19 62823527 62823527 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ADRA1A 148 hgsc.bcm.edu 36 8 26778241 26778241 + Nonsense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PNOC 5368 hgsc.bcm.edu 36 8 28242628 28242628 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PLAG1 5324 hgsc.bcm.edu 36 8 57242414 57242414 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GGH 8836 hgsc.bcm.edu 36 8 64113791 64113791 + Missense_Mutation SNP C C T rs11545077 unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LRRCC1 85444 hgsc.bcm.edu 36 8 86222978 86222978 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PSKH2 85481 hgsc.bcm.edu 36 8 87150797 87150797 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PLEKHF2 79666 hgsc.bcm.edu 36 8 96236167 96236167 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SPAG1 6674 hgsc.bcm.edu 36 8 101306629 101306629 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RNF19A 25897 hgsc.bcm.edu 36 8 101369045 101369045 + Silent SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CSMD3 114788 hgsc.bcm.edu 36 8 113472122 113472122 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CPSF1 29894 hgsc.bcm.edu 36 8 145596195 145596195 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ATAD3B 83858 hgsc.bcm.edu 36 1 1411413 1411413 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KDM1A 0 hgsc.bcm.edu 36 1 23267711 23267711 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ARID1A 8289 hgsc.bcm.edu 36 1 26978139 26978139 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZSCAN20 7579 hgsc.bcm.edu 36 1 33717790 33717790 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 AGBL4 84871 hgsc.bcm.edu 36 1 48901429 48901429 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 USP24 23358 hgsc.bcm.edu 36 1 55363661 55363661 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 USP24 23358 hgsc.bcm.edu 36 1 55395626 55395626 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RBMXL1 56267 hgsc.bcm.edu 36 1 89221811 89221811 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GFI1 2672 hgsc.bcm.edu 36 1 92716734 92716734 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 AGL 178 hgsc.bcm.edu 36 1 100115827 100115827 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 C1orf162 128346 hgsc.bcm.edu 36 1 111822163 111822163 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 VANGL1 81839 hgsc.bcm.edu 36 1 116008235 116008235 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GJA8 2703 hgsc.bcm.edu 36 1 145847403 145847403 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FLG2 388698 hgsc.bcm.edu 36 1 150590680 150590680 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LCE2B 26239 hgsc.bcm.edu 36 1 150926082 150926082 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LMNA 4000 hgsc.bcm.edu 36 1 154373442 154373442 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LAMC1 3915 hgsc.bcm.edu 36 1 181378499 181378499 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KIF21B 23046 hgsc.bcm.edu 36 1 199239432 199239432 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RAB7L1 8934 hgsc.bcm.edu 36 1 204006545 204006545 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 HHAT 55733 hgsc.bcm.edu 36 1 208644472 208644472 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CHRM3 1131 hgsc.bcm.edu 36 1 238138836 238138836 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 OSBPL5 114879 hgsc.bcm.edu 36 11 3099869 3099869 + Silent SNP G G A rs11828515 unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 OR52B6 340980 hgsc.bcm.edu 36 11 5559627 5559627 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ABCC8 6833 hgsc.bcm.edu 36 11 17375098 17375098 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FLRT1 23769 hgsc.bcm.edu 36 11 63641360 63641360 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MEN1 4221 hgsc.bcm.edu 36 11 64328476 64328476 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MEN1 4221 hgsc.bcm.edu 36 11 64331087 64331087 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MEN1 4221 hgsc.bcm.edu 36 11 64334033 64334033 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 EHBP1L1 254102 hgsc.bcm.edu 36 11 65105771 65105771 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TYR 7299 hgsc.bcm.edu 36 11 88564148 88564148 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KIAA1731 85459 hgsc.bcm.edu 36 11 93070648 93070648 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CNTN5 53942 hgsc.bcm.edu 36 11 99684345 99684345 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ATM 472 hgsc.bcm.edu 36 11 107622922 107622922 + Nonsense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 HIST1H4A 8359 hgsc.bcm.edu 36 6 26130156 26130156 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MAS1L 116511 hgsc.bcm.edu 36 6 29562652 29562652 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MICA 4276 hgsc.bcm.edu 36 6 31487819 31487819 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 C6orf25 80739 hgsc.bcm.edu 36 6 31799902 31799902 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TFAP2D 83741 hgsc.bcm.edu 36 6 50790802 50790802 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PTPRK 5796 hgsc.bcm.edu 36 6 128339517 128339517 + Missense_Mutation SNP A A T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SYNE1 23345 hgsc.bcm.edu 36 6 152754280 152754280 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SYNE1 23345 hgsc.bcm.edu 36 6 152818387 152818387 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TAGAP 117289 hgsc.bcm.edu 36 6 159377663 159377663 + Missense_Mutation SNP G G C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 IGF2R 3482 hgsc.bcm.edu 36 6 160437541 160437541 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ALOX15 246 hgsc.bcm.edu 36 17 4489540 4489540 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 NLRP1 22861 hgsc.bcm.edu 36 17 5385932 5385932 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ODF4 146852 hgsc.bcm.edu 36 17 8189457 8189457 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MYH4 4622 hgsc.bcm.edu 36 17 10292660 10292660 + Nonsense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 DNAH9 1770 hgsc.bcm.edu 36 17 11813437 11813437 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZNF286A 57335 hgsc.bcm.edu 36 17 15552269 15552269 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SPECC1 92521 hgsc.bcm.edu 36 17 20104116 20104116 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PCGF2 7703 hgsc.bcm.edu 36 17 34149384 34149384 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GJC1 125111 hgsc.bcm.edu 36 17 40238213 40238213 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ABCC3 8714 hgsc.bcm.edu 36 17 46090831 46090831 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SPAG9 9043 hgsc.bcm.edu 36 17 46403079 46403079 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 BAGE 574 hgsc.bcm.edu 36 21 10120604 10120604 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CCDC154 645811 hgsc.bcm.edu 36 16 1427953 1427953 + Nonsense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CREBBP 1387 hgsc.bcm.edu 36 16 3728619 3728619 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CIITA 4261 hgsc.bcm.edu 36 16 10909029 10909029 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TNRC6A 27327 hgsc.bcm.edu 36 16 24723617 24723617 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MMP2 4313 hgsc.bcm.edu 36 16 54075521 54075521 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CDH8 1006 hgsc.bcm.edu 36 16 60245416 60245416 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CDH1 51343 hgsc.bcm.edu 36 16 67403635 67403635 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MYOM1 8736 hgsc.bcm.edu 36 18 3178882 3178882 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MIB1 57534 hgsc.bcm.edu 36 18 17602678 17602678 + Missense_Mutation SNP A A T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SMAD4 4089 hgsc.bcm.edu 36 18 46829110 46829110 + Silent SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SMAD4 4089 hgsc.bcm.edu 36 18 46845807 46845807 + Silent SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ALPK2 115701 hgsc.bcm.edu 36 18 54355688 54355688 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 DSEL 92126 hgsc.bcm.edu 36 18 63329946 63329946 + Missense_Mutation SNP T T A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CCDC102B 79839 hgsc.bcm.edu 36 18 64829164 64829164 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 NGLY1 55768 hgsc.bcm.edu 36 3 25736664 25736664 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TRANK1 0 hgsc.bcm.edu 36 3 36846130 36846130 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GRM2 2912 hgsc.bcm.edu 36 3 51721770 51721770 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 DZIP3 9666 hgsc.bcm.edu 36 3 109812844 109812844 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GATA2 2624 hgsc.bcm.edu 36 3 129688354 129688354 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 COL6A6 131873 hgsc.bcm.edu 36 3 131783250 131783250 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZIC1 7545 hgsc.bcm.edu 36 3 148611327 148611327 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 DHX36 170506 hgsc.bcm.edu 36 3 155515544 155515544 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PIK3CA 5290 hgsc.bcm.edu 36 3 180434689 180434689 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FBXO45 200933 hgsc.bcm.edu 36 3 197795429 197795429 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CACNA1C 775 hgsc.bcm.edu 36 12 2659126 2659126 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ENO2 2026 hgsc.bcm.edu 36 12 6899081 6899081 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KRAS 3845 hgsc.bcm.edu 36 12 25289551 25289551 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 HOXC8 3224 hgsc.bcm.edu 36 12 52691210 52691210 + Silent SNP C C G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 YEATS4 8089 hgsc.bcm.edu 36 12 68040025 68040025 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 BEST3 144453 hgsc.bcm.edu 36 12 68377817 68377817 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ATP2B1 490 hgsc.bcm.edu 36 12 88521686 88521686 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LUM 4060 hgsc.bcm.edu 36 12 90026313 90026313 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CHST11 50515 hgsc.bcm.edu 36 12 103675308 103675308 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CORO1C 23603 hgsc.bcm.edu 36 12 107570274 107570274 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 EPB42 2038 hgsc.bcm.edu 36 15 41286883 41286883 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 UNC13C 440279 hgsc.bcm.edu 36 15 52344860 52344860 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GCOM1 145781 hgsc.bcm.edu 36 15 55697670 55697670 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MYO9A 4649 hgsc.bcm.edu 36 15 70047416 70047416 + Missense_Mutation SNP A A T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ISLR 3671 hgsc.bcm.edu 36 15 72254698 72254698 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 AP3B2 8120 hgsc.bcm.edu 36 15 81143553 81143553 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ADAMTSL3 57188 hgsc.bcm.edu 36 15 82357672 82357672 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ISG20 3669 hgsc.bcm.edu 36 15 86996469 86996469 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FRMPD4 9758 hgsc.bcm.edu 36 X 12644682 12644682 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TLR8 51311 hgsc.bcm.edu 36 X 12847237 12847237 + Nonsense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TLR8 51311 hgsc.bcm.edu 36 X 12848590 12848590 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MAP7D2 256714 hgsc.bcm.edu 36 X 19943304 19943304 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FAM47C 442444 hgsc.bcm.edu 36 X 36936860 36936860 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 WNK3 65267 hgsc.bcm.edu 36 X 54351138 54351138 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 UPF3B 65109 hgsc.bcm.edu 36 X 118855947 118855947 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ODZ1 10178 hgsc.bcm.edu 36 X 123345668 123345668 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GPR112 139378 hgsc.bcm.edu 36 X 135258515 135258515 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FGF13 2258 hgsc.bcm.edu 36 X 137545403 137545403 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FMR1 2477 hgsc.bcm.edu 36 X 146819420 146819420 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PASD1 139135 hgsc.bcm.edu 36 X 150593173 150593173 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 POLN 353497 hgsc.bcm.edu 36 4 2179740 2179740 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GUF1 60558 hgsc.bcm.edu 36 4 44380082 44380082 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KIT 3815 hgsc.bcm.edu 36 4 55288406 55288406 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 AASDH 132949 hgsc.bcm.edu 36 4 56916229 56916229 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GPRIN3 285513 hgsc.bcm.edu 36 4 90389740 90389740 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ALPK1 80216 hgsc.bcm.edu 36 4 113571062 113571062 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 METTL14 57721 hgsc.bcm.edu 36 4 119850716 119850716 + Missense_Mutation SNP A A C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 DCLK2 166614 hgsc.bcm.edu 36 4 151380349 151380349 + Silent SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FBXW7 55294 hgsc.bcm.edu 36 4 153464848 153464848 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FBXW7 55294 hgsc.bcm.edu 36 4 153468910 153468910 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FBXO8 26269 hgsc.bcm.edu 36 4 175395230 175395230 + Nonsense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ADAM29 11086 hgsc.bcm.edu 36 4 176133343 176133343 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KCNS3 3790 hgsc.bcm.edu 36 2 17977147 17977147 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SULT6B1 391365 hgsc.bcm.edu 36 2 37252192 37252192 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 REG3A 5068 hgsc.bcm.edu 36 2 79238225 79238225 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MAP4K4 9448 hgsc.bcm.edu 36 2 101822715 101822715 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LRP1B 53353 hgsc.bcm.edu 36 2 141341856 141341856 + Nonsense_Mutation SNP G G C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LRP2 4036 hgsc.bcm.edu 36 2 169734543 169734543 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LRP2 4036 hgsc.bcm.edu 36 2 169855734 169855734 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZAK 51776 hgsc.bcm.edu 36 2 173742798 173742798 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TTN 7273 hgsc.bcm.edu 36 2 179293361 179293361 + Missense_Mutation SNP G G C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 HECW2 57520 hgsc.bcm.edu 36 2 197006352 197006352 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ABCA12 26154 hgsc.bcm.edu 36 2 215515966 215515966 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 C9orf68 55064 hgsc.bcm.edu 36 9 4651998 4651998 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TLN1 7094 hgsc.bcm.edu 36 9 35693799 35693799 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TNFSF8 944 hgsc.bcm.edu 36 9 116706093 116706093 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TOR1A 1861 hgsc.bcm.edu 36 9 131616296 131616296 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 NUP214 8021 hgsc.bcm.edu 36 9 133088085 133088085 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LRCH1 23143 hgsc.bcm.edu 36 13 46158087 46158087 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 HTR2A 3356 hgsc.bcm.edu 36 13 46364660 46364660 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RB1 5925 hgsc.bcm.edu 36 13 47925204 47925204 + Silent SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KPNA3 3839 hgsc.bcm.edu 36 13 49205152 49205152 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CARKD 55739 hgsc.bcm.edu 36 13 110075576 110075576 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GTPBP4 23560 hgsc.bcm.edu 36 10 1032096 1032096 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 UCMA 221044 hgsc.bcm.edu 36 10 13316247 13316247 + Silent SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CHAT 10044 hgsc.bcm.edu 36 10 50505694 50505694 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PTEN 5728 hgsc.bcm.edu 36 10 89614251 89614251 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MKI67 4288 hgsc.bcm.edu 36 10 129793292 129793292 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RIOK2 55781 hgsc.bcm.edu 36 5 96532798 96532798 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 APC 324 hgsc.bcm.edu 36 5 112156042 112156042 + Nonsense_Mutation SNP C C T rs62619935 unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 APC 324 hgsc.bcm.edu 36 5 112198591 112198591 + Silent SNP A A G novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FNIP1 96459 hgsc.bcm.edu 36 5 131070046 131070046 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PCDHA1 56147 hgsc.bcm.edu 36 5 140148150 140148150 + Silent SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 PCDHA3 56145 hgsc.bcm.edu 36 5 140162629 140162629 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TP53 7157 hgsc.bcm.edu 36 17 7520316 7520316 + Splice_Site SNP C C T novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 NUAK2 81788 hgsc.bcm.edu 36 1 203544458 203544461 + Frame_Shift_Del DEL CACG CACG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CACG CACG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TGOLN2 10618 hgsc.bcm.edu 36 2 85408047 85408088 + In_Frame_Del DEL CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZNF717 100131827 hgsc.bcm.edu 36 3 75869732 75869733 + Frame_Shift_Ins INS - - AAAT novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZNF717 100131827 hgsc.bcm.edu 36 3 75869734 75869735 + In_Frame_Del INS - - CTT novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MUC4 4585 hgsc.bcm.edu 36 3 196991050 196991097 + In_Frame_Del DEL ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MUC4 4585 hgsc.bcm.edu 36 3 196991492 196991539 + In_Frame_Del DEL GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MUC4 4585 hgsc.bcm.edu 36 3 196999762 196999809 + In_Frame_Del DEL GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FAT1 2195 hgsc.bcm.edu 36 4 187777865 187777865 + Frame_Shift_Del DEL A A - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TAS2R3 50831 hgsc.bcm.edu 36 7 141111038 141111040 + In_Frame_Del DEL TCT TCT - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 TCT TCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RP1L1 94137 hgsc.bcm.edu 36 8 10505081 10505083 + In_Frame_Del DEL CTC CTC - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CTC CTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RP1L1 94137 hgsc.bcm.edu 36 8 10505091 10505096 + In_Frame_Del DEL TCCTTC TCCTTC - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 TCCTTC TCCTTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RUNX1T1 862 hgsc.bcm.edu 36 8 93096137 93096139 + In_Frame_Del DEL GAA GAA - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 GAA GAA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CEL 1056 hgsc.bcm.edu 36 9 134936823 134936855 + In_Frame_Del DEL CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 OR6C76 390326 hgsc.bcm.edu 36 12 54107226 54107226 + Frame_Shift_Del DEL A A - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LRRIQ1 84125 hgsc.bcm.edu 36 12 84162777 84162777 + Frame_Shift_Del DEL A A - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ORAI1 84876 hgsc.bcm.edu 36 12 120549157 120549162 + In_Frame_Del DEL CCGCCA CCGCCA - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CCGCCA CCGCCA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 WDR66 144406 hgsc.bcm.edu 36 12 120843780 120843781 + In_Frame_Ins INS - - GAGGAGGAGGAGAAA novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GPHN 10243 hgsc.bcm.edu 36 14 66595222 66595223 + Frame_Shift_Ins INS - - C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SLX1A 0 hgsc.bcm.edu 36 16 29373712 29373712 + Frame_Shift_Del DEL A A - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RLTPR 146206 hgsc.bcm.edu 36 16 66238733 66238735 + In_Frame_Del DEL ATG ATG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 ATG ATG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LGALS9B 284194 hgsc.bcm.edu 36 17 20311374 20311375 + Frame_Shift_Ins INS - - TC novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KRTAP4-1 85285 hgsc.bcm.edu 36 17 36594322 36594378 + Frame_Shift_Del DEL CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GNRH2 2797 hgsc.bcm.edu 36 20 2974345 2974346 + Frame_Shift_Ins INS - - GCCCC rs16996832 unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RALY 22913 hgsc.bcm.edu 36 20 32128525 32128526 + In_Frame_Ins INS - - CAG rs10649600 unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KRTAP10-7 386675 hgsc.bcm.edu 36 21 44845084 44845098 + Frame_Shift_Del DEL CTGCTGCGCCCCCAG CTGCTGCGCCCCCAG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CTGCTGCGCCCCCAG CTGCTGCGCCCCCAG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 NEFH 4744 hgsc.bcm.edu 36 22 28215567 28215568 + In_Frame_Ins INS - - AAGTCCCCTGAGAAGGCC novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FAM47A 158724 hgsc.bcm.edu 36 X 34059579 34059614 + In_Frame_Del DEL ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 NUAK2 81788 hgsc.bcm.edu 36 1 203544458 203544461 + Frame_Shift_Del DEL CACG CACG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CACG CACG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TGOLN2 10618 hgsc.bcm.edu 36 2 85408047 85408088 + In_Frame_Del DEL CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZNF717 100131827 hgsc.bcm.edu 36 3 75869732 75869733 + Frame_Shift_Ins INS - - AAAT novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ZNF717 100131827 hgsc.bcm.edu 36 3 75869734 75869735 + In_Frame_Del INS - - CTT novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MUC4 4585 hgsc.bcm.edu 36 3 196991050 196991097 + In_Frame_Del DEL ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MUC4 4585 hgsc.bcm.edu 36 3 196991492 196991539 + In_Frame_Del DEL GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 MUC4 4585 hgsc.bcm.edu 36 3 196999762 196999809 + In_Frame_Del DEL GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FAT1 2195 hgsc.bcm.edu 36 4 187777865 187777865 + Frame_Shift_Del DEL A A - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 TAS2R3 50831 hgsc.bcm.edu 36 7 141111038 141111040 + In_Frame_Del DEL TCT TCT - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 TCT TCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RP1L1 94137 hgsc.bcm.edu 36 8 10505081 10505083 + In_Frame_Del DEL CTC CTC - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CTC CTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RP1L1 94137 hgsc.bcm.edu 36 8 10505091 10505096 + In_Frame_Del DEL TCCTTC TCCTTC - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 TCCTTC TCCTTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RUNX1T1 862 hgsc.bcm.edu 36 8 93096137 93096139 + In_Frame_Del DEL GAA GAA - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 GAA GAA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 CEL 1056 hgsc.bcm.edu 36 9 134936823 134936855 + In_Frame_Del DEL CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 OR6C76 390326 hgsc.bcm.edu 36 12 54107226 54107226 + Frame_Shift_Del DEL A A - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 LRRIQ1 84125 hgsc.bcm.edu 36 12 84162777 84162777 + Frame_Shift_Del DEL A A - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 ORAI1 84876 hgsc.bcm.edu 36 12 120549157 120549162 + In_Frame_Del DEL CCGCCA CCGCCA - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CCGCCA CCGCCA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 WDR66 144406 hgsc.bcm.edu 36 12 120843780 120843781 + In_Frame_Ins INS - - GAGGAGGAGGAGAAA novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 GPHN 10243 hgsc.bcm.edu 36 14 66595222 66595223 + Frame_Shift_Ins INS - - C novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 SLX1A 0 hgsc.bcm.edu 36 16 29373712 29373712 + Frame_Shift_Del DEL A A - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RLTPR 146206 hgsc.bcm.edu 36 16 66238733 66238735 + In_Frame_Del DEL ATG ATG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 ATG ATG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KRTAP4-1 85285 hgsc.bcm.edu 36 17 36594322 36594378 + Frame_Shift_Del DEL CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 RALY 22913 hgsc.bcm.edu 36 20 32128525 32128526 + In_Frame_Ins INS - - CAG rs10649600 unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 KRTAP10-7 386675 hgsc.bcm.edu 36 21 44845084 44845098 + Frame_Shift_Del DEL CTGCTGCGCCCCCAG CTGCTGCGCCCCCAG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 CTGCTGCGCCCCCAG CTGCTGCGCCCCCAG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 NEFH 4744 hgsc.bcm.edu 36 22 28215567 28215568 + In_Frame_Ins INS - - AAGTCCCCTGAGAAGGCC novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3 FAM47A 158724 hgsc.bcm.edu 36 X 34059579 34059614 + In_Frame_Del DEL ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG - novel unknown TCGA-AG-3731-01A-11D-1733-10 TCGA-AG-3731-11A-01D-1733-10 ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 3f3974a1-e0c1-4b51-a363-73938d0c2b00 20617e67-8a2d-4150-86d7-1c1a5854adf3