Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID CARD11 84433 hgsc.bcm.edu 36 7 2929372 2929372 + Nonsense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c GRID2IP 392862 hgsc.bcm.edu 36 7 6532899 6532899 + Missense_Mutation SNP G G T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c RSPH10B2 728194 hgsc.bcm.edu 36 7 6771895 6771895 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c NACAD 23148 hgsc.bcm.edu 36 7 45091715 45091715 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PSPH 5723 hgsc.bcm.edu 36 7 56056396 56056396 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ZNF138 7697 hgsc.bcm.edu 36 7 63929532 63929532 + Silent SNP A A C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c RHBDD2 57414 hgsc.bcm.edu 36 7 75349416 75349416 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PEX1 5189 hgsc.bcm.edu 36 7 91961615 91961615 + Silent SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PSMC2 5701 hgsc.bcm.edu 36 7 102791867 102791867 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KCND2 3751 hgsc.bcm.edu 36 7 120173199 120173199 + Nonsense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SSPO 23145 hgsc.bcm.edu 36 7 149115731 149115731 + Silent SNP C C T rs62490656 unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c DPP6 1804 hgsc.bcm.edu 36 7 153633532 153633532 + Missense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HTR5A 3361 hgsc.bcm.edu 36 7 154494232 154494232 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PAK7 57144 hgsc.bcm.edu 36 20 9509106 9509106 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MYH7B 57644 hgsc.bcm.edu 36 20 33052771 33052771 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TAF4 6874 hgsc.bcm.edu 36 20 60018522 60018522 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SRMS 6725 hgsc.bcm.edu 36 20 61649115 61649115 + Missense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ADRBK2 157 hgsc.bcm.edu 36 22 24387588 24387588 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c COCH 1690 hgsc.bcm.edu 36 14 30424417 30424417 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c LRFN5 145581 hgsc.bcm.edu 36 14 41425766 41425766 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KIAA0586 9786 hgsc.bcm.edu 36 14 57979193 57979193 + Missense_Mutation SNP G G C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c WDR25 79446 hgsc.bcm.edu 36 14 99917767 99917767 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c APC2 79085 hgsc.bcm.edu 36 19 1406453 1406453 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CREB3L3 84699 hgsc.bcm.edu 36 19 4108245 4108245 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MUC16 94025 hgsc.bcm.edu 36 19 8927159 8927159 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MUC16 94025 hgsc.bcm.edu 36 19 8951251 8951251 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CYP4F8 11283 hgsc.bcm.edu 36 19 15587480 15587480 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SLC27A1 376497 hgsc.bcm.edu 36 19 17469117 17469117 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ZNF430 80264 hgsc.bcm.edu 36 19 21031784 21031784 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c AP2A1 160 hgsc.bcm.edu 36 19 54995201 54995201 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ZNF808 388558 hgsc.bcm.edu 36 19 57749154 57749154 + Silent SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CSMD1 64478 hgsc.bcm.edu 36 8 2783611 2783611 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FGL1 2267 hgsc.bcm.edu 36 8 17776165 17776165 + Missense_Mutation SNP A A T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HR 55806 hgsc.bcm.edu 36 8 22040714 22040714 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PNMA2 10687 hgsc.bcm.edu 36 8 26421100 26421100 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TRIM35 23087 hgsc.bcm.edu 36 8 27201148 27201148 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TMEM64 169200 hgsc.bcm.edu 36 8 91713108 91713108 + Missense_Mutation SNP T T A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TRPS1 7227 hgsc.bcm.edu 36 8 116668873 116668873 + Missense_Mutation SNP G G T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KCNQ3 3786 hgsc.bcm.edu 36 8 133211275 133211275 + Missense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MEGF6 1953 hgsc.bcm.edu 36 1 3405601 3405601 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FAM131C 348487 hgsc.bcm.edu 36 1 16257618 16257618 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c IGSF21 84966 hgsc.bcm.edu 36 1 18575955 18575955 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HMGCL 3155 hgsc.bcm.edu 36 1 24015788 24015788 + Silent SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c NT5C1A 84618 hgsc.bcm.edu 36 1 39897679 39897679 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c GLIS1 148979 hgsc.bcm.edu 36 1 53748288 53748288 + Silent SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c LRRIQ3 127255 hgsc.bcm.edu 36 1 74279866 74279866 + Missense_Mutation SNP G G T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c DPYD 1806 hgsc.bcm.edu 36 1 97754067 97754067 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c LPPR5 0 hgsc.bcm.edu 36 1 99194781 99194781 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c VANGL1 81839 hgsc.bcm.edu 36 1 116008235 116008235 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HFE2 148738 hgsc.bcm.edu 36 1 144127017 144127017 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c LCE1B 353132 hgsc.bcm.edu 36 1 151051874 151051874 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KCNN3 3782 hgsc.bcm.edu 36 1 153011358 153011358 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c OLFML2B 25903 hgsc.bcm.edu 36 1 160234618 160234618 + Silent SNP G G A rs34123330 unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c DCHS1 8642 hgsc.bcm.edu 36 11 6611785 6611785 + Missense_Mutation SNP C C G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SYT9 143425 hgsc.bcm.edu 36 11 7398334 7398334 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c DENND5A 23258 hgsc.bcm.edu 36 11 9128867 9128867 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c RRAS2 22800 hgsc.bcm.edu 36 11 14257469 14257469 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SOX6 55553 hgsc.bcm.edu 36 11 16027986 16027986 + Silent SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SLC43A3 29015 hgsc.bcm.edu 36 11 56950109 56950109 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ATG2A 23130 hgsc.bcm.edu 36 11 64431459 64431459 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CPT1A 1374 hgsc.bcm.edu 36 11 68331642 68331642 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c GRIA4 2893 hgsc.bcm.edu 36 11 105302711 105302711 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HMBS 3145 hgsc.bcm.edu 36 11 118468069 118468069 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KCNJ1 3758 hgsc.bcm.edu 36 11 128215296 128215296 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KCNJ1 3758 hgsc.bcm.edu 36 11 128215315 128215315 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c GPX5 2880 hgsc.bcm.edu 36 6 28609846 28609846 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c UBD 10537 hgsc.bcm.edu 36 6 29631766 29631766 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c GABBR1 10537 hgsc.bcm.edu 36 6 29684365 29684365 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SPACA1 81833 hgsc.bcm.edu 36 6 88820400 88820400 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c GJA10 84694 hgsc.bcm.edu 36 6 90661130 90661130 + Missense_Mutation SNP G G T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c POPDC3 64208 hgsc.bcm.edu 36 6 105716179 105716179 + Missense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ROS1 6098 hgsc.bcm.edu 36 6 117752257 117752257 + Missense_Mutation SNP G G T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FAM184A 79632 hgsc.bcm.edu 36 6 119365867 119365867 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c AKAP12 9590 hgsc.bcm.edu 36 6 151714090 151714090 + Missense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TCP1 6950 hgsc.bcm.edu 36 6 160126454 160126454 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MAP3K4 4216 hgsc.bcm.edu 36 6 161430463 161430463 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HGC6.3 100128124 hgsc.bcm.edu 36 6 168120036 168120036 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c OR1A2 26189 hgsc.bcm.edu 36 17 3048187 3048187 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ITGB3 3690 hgsc.bcm.edu 36 17 42739949 42739949 + Nonsense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c BAHCC1 57597 hgsc.bcm.edu 36 17 77043196 77043196 + Silent SNP C C T rs61738790 unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c NARF 51444 hgsc.bcm.edu 36 17 78039291 78039291 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c OLIG2 10215 hgsc.bcm.edu 36 21 33321419 33321419 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TMEM50B 757 hgsc.bcm.edu 36 21 33754626 33754626 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MORC3 23515 hgsc.bcm.edu 36 21 36656394 36656394 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c NPRL3 0 hgsc.bcm.edu 36 16 78772 78772 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c C16orf71 146562 hgsc.bcm.edu 36 16 4737376 4737376 + Nonsense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ABCC1 4363 hgsc.bcm.edu 36 16 16139800 16139800 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CES5A 0 hgsc.bcm.edu 36 16 54437988 54437988 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c NIP7 51388 hgsc.bcm.edu 36 16 67932985 67932985 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HYDIN 54768 hgsc.bcm.edu 36 16 69470825 69470825 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HYDIN 54768 hgsc.bcm.edu 36 16 69652006 69652006 + Missense_Mutation SNP G G T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c BCAR1 9564 hgsc.bcm.edu 36 16 73834276 73834276 + Missense_Mutation SNP G G A rs1035539 by2Hit2Allele;byCluster;byFrequency TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MON1B 22879 hgsc.bcm.edu 36 16 75782905 75782905 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c VAT1L 57687 hgsc.bcm.edu 36 16 76569078 76569078 + Missense_Mutation SNP G G T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CPLX4 339302 hgsc.bcm.edu 36 18 55115080 55115080 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PDCD6IP 10015 hgsc.bcm.edu 36 3 33841737 33841737 + Nonsense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SLC22A14 9389 hgsc.bcm.edu 36 3 38323009 38323009 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SCN10A 6336 hgsc.bcm.edu 36 3 38725994 38725994 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CACNA1D 776 hgsc.bcm.edu 36 3 53731465 53731465 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c C3orf36 80111 hgsc.bcm.edu 36 3 135130183 135130183 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KRAS 3845 hgsc.bcm.edu 36 12 25289548 25289548 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KRT73 319101 hgsc.bcm.edu 36 12 51291379 51291379 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SP7 121340 hgsc.bcm.edu 36 12 52009159 52009159 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c COPZ1 22818 hgsc.bcm.edu 36 12 53023348 53023348 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ARHGEF25 0 hgsc.bcm.edu 36 12 56293511 56293511 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c AVPR1A 552 hgsc.bcm.edu 36 12 61830476 61830476 + Silent SNP A A G rs1042615 by2Hit2Allele;byCluster;byFrequency;byHapMap TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c NOS1 340719 hgsc.bcm.edu 36 12 116208441 116208441 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c WSB2 55884 hgsc.bcm.edu 36 12 116974533 116974533 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c WDR66 144406 hgsc.bcm.edu 36 12 120871299 120871299 + Missense_Mutation SNP T T A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c NCOR2 9612 hgsc.bcm.edu 36 12 123404611 123404611 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TMEM132B 114795 hgsc.bcm.edu 36 12 124703008 124703008 + Silent SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HERC2 8924 hgsc.bcm.edu 36 15 26132622 26132622 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PLCB2 5330 hgsc.bcm.edu 36 15 38370149 38370149 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TMEM87A 25963 hgsc.bcm.edu 36 15 40317008 40317008 + Missense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CEP152 22995 hgsc.bcm.edu 36 15 46818399 46818399 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KIAA1370 56204 hgsc.bcm.edu 36 15 50673200 50673200 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c POLG 5428 hgsc.bcm.edu 36 15 87671449 87671449 + Silent SNP C C G rs62640034 unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FAM9A 171482 hgsc.bcm.edu 36 X 8726199 8726199 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c POLA1 5422 hgsc.bcm.edu 36 X 24676361 24676361 + Missense_Mutation SNP G G C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c DCAF8L2 0 hgsc.bcm.edu 36 X 27675359 27675359 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FAM47A 158724 hgsc.bcm.edu 36 X 34058643 34058643 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CXorf22 170063 hgsc.bcm.edu 36 X 35903783 35903783 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ASB12 142689 hgsc.bcm.edu 36 X 63361504 63361504 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MTMR8 66036 hgsc.bcm.edu 36 X 63486619 63486619 + Silent SNP C C G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c IGBP1 3476 hgsc.bcm.edu 36 X 69302539 69302539 + Nonsense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c DRP2 1821 hgsc.bcm.edu 36 X 100401737 100401737 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TCEAL6 158931 hgsc.bcm.edu 36 X 101282607 101282607 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c RNF128 79589 hgsc.bcm.edu 36 X 105856999 105856999 + Missense_Mutation SNP A A T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KLHL13 90293 hgsc.bcm.edu 36 X 116927773 116927773 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SMARCA1 6594 hgsc.bcm.edu 36 X 128442804 128442804 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MAGEC1 9947 hgsc.bcm.edu 36 X 140823326 140823326 + Missense_Mutation SNP A A T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FLNA 2316 hgsc.bcm.edu 36 X 153252602 153252602 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c F8 2157 hgsc.bcm.edu 36 X 153811156 153811156 + Missense_Mutation SNP G G T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SEL1L3 0 hgsc.bcm.edu 36 4 25430633 25430633 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SPATA18 132671 hgsc.bcm.edu 36 4 52632860 52632860 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c KDR 3791 hgsc.bcm.edu 36 4 55653621 55653621 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ANKRD17 26057 hgsc.bcm.edu 36 4 74205542 74205542 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TACR3 6870 hgsc.bcm.edu 36 4 104730328 104730328 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c RRH 10692 hgsc.bcm.edu 36 4 110976655 110976655 + Silent SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FBXW7 55294 hgsc.bcm.edu 36 4 153471351 153471351 + Nonsense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FBXW7 55294 hgsc.bcm.edu 36 4 153490656 153490656 + Nonsense_Mutation SNP G G C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SNX25 83891 hgsc.bcm.edu 36 4 186504722 186504722 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c APOB 338 hgsc.bcm.edu 36 2 21080993 21080993 + Missense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PAPOLG 64895 hgsc.bcm.edu 36 2 60874805 60874805 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TET3 200424 hgsc.bcm.edu 36 2 74182597 74182597 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TRIM43 129868 hgsc.bcm.edu 36 2 95623906 95623906 + Missense_Mutation SNP C C G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c GCC2 9648 hgsc.bcm.edu 36 2 108452707 108452707 + Silent SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c BIN1 274 hgsc.bcm.edu 36 2 127527997 127527997 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c WDR33 55339 hgsc.bcm.edu 36 2 128180387 128180387 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ZEB2 9839 hgsc.bcm.edu 36 2 144878975 144878975 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TTN 7273 hgsc.bcm.edu 36 2 179139787 179139787 + Silent SNP G G A rs55861600 unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TTN 7273 hgsc.bcm.edu 36 2 179144340 179144340 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TTN 7273 hgsc.bcm.edu 36 2 179304742 179304742 + Missense_Mutation SNP G G T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CRYGB 1419 hgsc.bcm.edu 36 2 208718974 208718974 + Silent SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c WNT10A 80326 hgsc.bcm.edu 36 2 219455221 219455221 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c COL6A3 1293 hgsc.bcm.edu 36 2 237940199 237940199 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c GLIS3 169792 hgsc.bcm.edu 36 9 4107899 4107899 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SNAPC3 6619 hgsc.bcm.edu 36 9 15423600 15423600 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MELK 9833 hgsc.bcm.edu 36 9 36641833 36641833 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FAM75D1 0 hgsc.bcm.edu 36 9 83793715 83793715 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FAM75D1 0 hgsc.bcm.edu 36 9 83796420 83796420 + Silent SNP A A T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ZNF189 7743 hgsc.bcm.edu 36 9 103211423 103211423 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ZMYM2 7750 hgsc.bcm.edu 36 13 19530767 19530767 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FLT1 2321 hgsc.bcm.edu 36 13 27899900 27899900 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c BRCA2 675 hgsc.bcm.edu 36 13 31805503 31805503 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ATP7B 540 hgsc.bcm.edu 36 13 51413242 51413242 + Missense_Mutation SNP T T C novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ARMC4 55130 hgsc.bcm.edu 36 10 28300167 28300167 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ANKRD30A 91074 hgsc.bcm.edu 36 10 37471121 37471121 + Silent SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c WDFY4 57705 hgsc.bcm.edu 36 10 49704818 49704818 + Missense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ANK3 288 hgsc.bcm.edu 36 10 61499039 61499039 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c TET1 80312 hgsc.bcm.edu 36 10 70096941 70096941 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CDH23 64072 hgsc.bcm.edu 36 10 73161859 73161859 + Silent SNP C C G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PTEN 5728 hgsc.bcm.edu 36 10 89682981 89682981 + Missense_Mutation SNP A A G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CCDC147 159686 hgsc.bcm.edu 36 10 106150458 106150458 + Missense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c RANBP3L 202151 hgsc.bcm.edu 36 5 36300883 36300883 + Missense_Mutation SNP C C T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c RNF180 285671 hgsc.bcm.edu 36 5 63545977 63545977 + Missense_Mutation SNP C C A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c APC 324 hgsc.bcm.edu 36 5 112203379 112203379 + Nonsense_Mutation SNP G G T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c APC 324 hgsc.bcm.edu 36 5 112203382 112203382 + Missense_Mutation SNP A A T novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PCDHA12 56137 hgsc.bcm.edu 36 5 140237258 140237258 + Missense_Mutation SNP G G A novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c PDZD8 118987 hgsc.bcm.edu 36 10 119090480 119090480 + Splice_Site SNP C C G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c C2orf71 388939 hgsc.bcm.edu 36 2 29141430 29141431 + In_Frame_Ins INS - - GCT novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ZFP36L2 678 hgsc.bcm.edu 36 2 43305968 43305969 + Frame_Shift_Ins INS - - G novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c MYL1 4632 hgsc.bcm.edu 36 2 210888011 210888011 + Frame_Shift_Del DEL T T - novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c APC 324 hgsc.bcm.edu 36 5 112203379 112203380 + Frame_Shift_Del DEL GA GA - novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 GA GA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c CYP21A2 1589 hgsc.bcm.edu 36 6 32114194 32114196 + In_Frame_Del DEL CTG CTG - novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 CTG CTG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HLA-DQA1 3117 hgsc.bcm.edu 36 6 32717217 32717219 + In_Frame_Del DEL GGT GGT - novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 GGT GGT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c USP42 84132 hgsc.bcm.edu 36 7 6160039 6160040 + Frame_Shift_Ins INS - - C rs11408379 unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FOXD4L2 100036519 hgsc.bcm.edu 36 9 42709305 42709307 + In_Frame_Del DEL GCT GCT - novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 GCT GCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c ALDH3B1 221 hgsc.bcm.edu 36 11 67551954 67551955 + Frame_Shift_Ins INS - - C rs11436139 unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c GOLGA6L6 0 hgsc.bcm.edu 36 15 18999858 18999899 + In_Frame_Del DEL GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT - novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c HAP1 9001 hgsc.bcm.edu 36 17 37142116 37142117 + Frame_Shift_Ins INS - - CT novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c POLI 11201 hgsc.bcm.edu 36 18 50049956 50049958 + In_Frame_Del DEL CGA CGA - novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 CGA CGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c FAM9A 171482 hgsc.bcm.edu 36 X 8726191 8726199 + Frame_Shift_Del DEL CTGCAATAT CTGCAATAT - novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 CTGCAATAT CTGCAATAT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c SHROOM4 57477 hgsc.bcm.edu 36 X 50367498 50367499 + In_Frame_Ins INS - - TGCTGCTGCTGT novel unknown TCGA-AF-5654-01A-01D-1657-10 TCGA-AF-5654-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq be6903cf-cfdc-4923-8991-da2544dce86c d9a42723-5926-49f6-85ef-c25824c3d39c