Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
ZNF185	7739	broad.mit.edu	37	X	152085712	152085712	+	Splice_Site	SNP	C	C	A			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chrX:152085712C>A	ENST00000535861.1	+	4	310	c.263_splice	c.e4+1	p.R88_splice	ZNF185_ENST00000539731.1_Splice_Site_p.R88_splice|ZNF185_ENST00000318504.7_Splice_Site_p.R88_splice|ZNF185_ENST00000449285.2_Splice_Site_p.R88_splice|ZNF185_ENST00000324823.6_5'UTR|ZNF185_ENST00000370268.4_Splice_Site_p.R88_splice	NM_001178106.1	NP_001171577.1	O15231	ZN185_HUMAN	zinc finger protein 185 (LIM domain)	88						cytoplasm|cytoskeleton|focal adhesion	zinc ion binding			NS(1)|endometrium(1)|kidney(2)|large_intestine(2)|lung(3)|ovary(3)	12	Acute lymphoblastic leukemia(192;6.56e-05)					CTACATCATCCGGTAAGTGAC	0.622000													3	29					0.004672	0.00511695	1	1	0
LAMA3	3909	broad.mit.edu	37	18	21523936	21523936	+	Splice_Site	SNP	G	G	A			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr18:21523936G>A	ENST00000313654.9	+	69	9451		c.e69+1		LAMA3_ENST00000587184.1_Splice_Site|LAMA3_ENST00000399516.3_Splice_Site|LAMA3_ENST00000588770.1_Splice_Site|LAMA3_ENST00000269217.6_Splice_Site	NM_198129.1	NP_937762.1	Q16787	LAMA3_HUMAN	laminin, alpha 3						cell adhesion|epidermis development|hemidesmosome assembly|regulation of cell adhesion|regulation of cell migration|regulation of embryonic development	laminin-1 complex	receptor binding|structural molecule activity			NS(2)|breast(4)|central_nervous_system(3)|cervix(1)|endometrium(9)|haematopoietic_and_lymphoid_tissue(2)|kidney(4)|large_intestine(24)|lung(54)|ovary(8)|prostate(6)|skin(7)|urinary_tract(4)	128	all_cancers(21;7.81e-05)|all_epithelial(16;4.45e-07)|Lung NSC(20;0.00156)|all_lung(20;0.00508)|Colorectal(14;0.0202)|Ovarian(20;0.17)				Alteplase(DB00009)|Anistreplase(DB00029)|Reteplase(DB00015)|Tenecteplase(DB00031)	ATGGCACACGGTAAGAGCTGG	0.478000													3	20					0	0	1	0	0
ZNF761	388561	broad.mit.edu	37	19	53945909	53945909	+	RNA	SNP	T	T	C	rs28727441	by1000genomes	TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr19:53945909T>C	ENST00000454407.1	+	0	55				TPM3P9_ENST00000424846.3_RNA			Q86XN6	ZN761_HUMAN	zinc finger protein 761						regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			endometrium(1)|kidney(2)|large_intestine(5)|lung(13)|ovary(1)|prostate(2)|skin(4)|stomach(1)|upper_aerodigestive_tract(1)	30				GBM - Glioblastoma multiforme(134;0.00786)		ACCCTGACTCTGCCTGAGGCC	0.562000													4	23					0	0	1	0	0
ELTD1	64123	broad.mit.edu	37	1	79401981	79401981	+	Splice_Site	SNP	A	A	T			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr1:79401981A>T	ENST00000370742.3	-	7	939	c.877_splice	c.e7+1	p.N292_splice		NM_022159.3	NP_071442.2	Q9HBW9	ELTD1_HUMAN	EGF, latrophilin and seven transmembrane domain containing 1	292					neuropeptide signaling pathway	integral to membrane|plasma membrane	calcium ion binding|G-protein coupled receptor activity			NS(1)|breast(1)|endometrium(3)|kidney(2)|large_intestine(10)|lung(45)|ovary(1)|prostate(1)|skin(3)|upper_aerodigestive_tract(2)	69				COAD - Colon adenocarcinoma(225;0.0905)|Colorectal(170;0.103)|all cancers(265;0.105)|Epithelial(280;0.148)		AAGTCCTACCATTTGAATCAT	0.269000													8	63					0	0	1	0	0
SCNN1B	6338	broad.mit.edu	37	16	23387059	23387059	+	Splice_Site	SNP	G	G	T			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr16:23387059G>T	ENST00000343070.2	+	8	1329	c.1152_splice	c.e8-1	p.A385_splice	SCNN1B_ENST00000568085.1_Splice_Site_p.A349_splice|SCNN1B_ENST00000568923.1_Splice_Site_p.A358_splice|SCNN1B_ENST00000307331.5_Splice_Site_p.A430_splice	NM_000336.2	NP_000327.2	P51168	SCNNB_HUMAN	sodium channel, non-voltage-gated 1, beta subunit	385					excretion|sensory perception of taste	apical plasma membrane	ligand-gated sodium channel activity|WW domain binding			breast(2)|endometrium(3)|kidney(2)|large_intestine(5)|liver(2)|lung(8)|ovary(3)|pancreas(1)|prostate(3)|skin(1)|stomach(1)|urinary_tract(1)	32				GBM - Glioblastoma multiforme(48;0.0465)	Amiloride(DB00594)|Triamterene(DB00384)	CCCTCCCCAGGCCTGTCTTCG	0.557000													4	68					0.0215528	0.0215528	1	1	0
ZNF417	147687	broad.mit.edu	37	19	58420525	58420525	+	Missense_Mutation	SNP	T	T	C			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr19:58420525T>C	ENST00000312026.5	-	3	1285	c.1121A>G	c.(1120-1122)cAc>cGc	p.H374R	CTD-2583A14.9_ENST00000602124.1_Intron|ZNF417_ENST00000536263.1_Missense_Mutation_p.H175R|ZNF417_ENST00000595559.1_Missense_Mutation_p.H373R	NM_152475.2	NP_689688.2	Q8TAU3	ZN417_HUMAN	zinc finger protein 417	374					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			central_nervous_system(1)|endometrium(2)|kidney(1)|large_intestine(3)|lung(7)|stomach(3)|upper_aerodigestive_tract(1)	18		Colorectal(82;5.46e-05)|all_neural(62;0.0218)|Breast(46;0.0389)|Ovarian(87;0.0443)|Renal(1328;0.157)		UCEC - Uterine corpus endometrioid carcinoma (67;0.168)|GBM - Glioblastoma multiforme(193;0.0151)		TTCTCCAGTGTGAACACGCTG	0.463000													30	79					0	0	1	0	0
RP11-481J13.1	0	broad.mit.edu	37	2	56216166	56216166	+	RNA	SNP	A	A	T			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr2:56216166A>T	ENST00000606639.1	+	0	82				MIR216A_ENST00000385063.1_RNA|AC011306.2_ENST00000446139.1_lincRNA																							CACAGTTGCCAGCTGAGATTA	0.483000													8	88					0	0	1	0	0
UGT8	7368	broad.mit.edu	37	4	115544471	115544471	+	Silent	SNP	T	T	C			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr4:115544471T>C	ENST00000310836.6	+	2	957	c.435T>C	c.(433-435)ttT>ttC	p.F145F	UGT8_ENST00000394511.3_Silent_p.F145F	NM_001128174.1	NP_001121646.1	Q16880	CGT_HUMAN	UDP glycosyltransferase 8	145					central nervous system development|peripheral nervous system development	integral to membrane	2-hydroxyacylsphingosine 1-beta-galactosyltransferase activity|UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity			breast(3)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(9)|lung(11)|ovary(1)|prostate(1)|skin(2)|urinary_tract(1)	31		Ovarian(17;0.156)		OV - Ovarian serous cystadenocarcinoma(123;0.000632)		TGTGTGGATTTGTGATAGCTC	0.463000													4	129					0	0	1	0	0
SHKBP1	92799	broad.mit.edu	37	19	41094581	41094581	+	Missense_Mutation	SNP	G	G	A			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr19:41094581G>A	ENST00000291842.5	+	14	1437	c.1388G>A	c.(1387-1389)gGc>gAc	p.G463D	SHKBP1_ENST00000600733.1_Missense_Mutation_p.G438D|SHKBP1_ENST00000597649.1_3'UTR	NM_138392.3	NP_612401.2	Q8TBC3	SHKB1_HUMAN	SH3KBP1 binding protein 1	463						voltage-gated potassium channel complex	voltage-gated potassium channel activity			breast(1)|cervix(1)|endometrium(1)|kidney(4)|large_intestine(5)|lung(10)|ovary(2)|pancreas(1)|skin(3)|urinary_tract(1)	29			Lung(22;0.000114)|LUSC - Lung squamous cell carcinoma(20;0.000384)			CGCTTCCGCGGCATGATTTCC	0.607000													4	83					0	0	1	0	0
AHRR	57491	broad.mit.edu	37	5	434411	434411	+	Missense_Mutation	SNP	C	C	T			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr5:434411C>T	ENST00000316418.5	+	12	1666	c.1622C>T	c.(1621-1623)cCg>cTg	p.P541L	AHRR_ENST00000506456.1_Missense_Mutation_p.P379L|AHRR_ENST00000505113.1_Missense_Mutation_p.P523L|AHRR_ENST00000512529.1_Missense_Mutation_p.P369L	NM_020731.4	NP_065782.2	A9YTQ3	AHRR_HUMAN	aryl-hydrocarbon receptor repressor	523					regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|nucleus	DNA binding|signal transducer activity			breast(2)|endometrium(4)|large_intestine(1)|lung(12)|prostate(1)	20			Epithelial(17;0.0011)|OV - Ovarian serous cystadenocarcinoma(19;0.00353)|all cancers(22;0.00354)|Lung(60;0.0863)			CCGATGCCTCCGGGGGACCTG	0.617000													5	15					0	0	1	0	0
C1orf86	199990	broad.mit.edu	37	1	2125338	2125338	+	Silent	SNP	G	G	A			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr1:2125338G>A	ENST00000378545.3	-	4	518	c.519C>T	c.(517-519)tgC>tgT	p.C173C	C1orf86_ENST00000487186.1_5'UTR|C1orf86_ENST00000400919.3_5'UTR|C1orf86_ENST00000378546.4_Silent_p.C70C			Q6NZ36	CA086_HUMAN	chromosome 1 open reading frame 86	70										central_nervous_system(1)|prostate(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	4	all_cancers(77;0.000134)|all_epithelial(69;4.45e-05)|all_lung(157;0.00963)|Lung NSC(156;0.0232)|Ovarian(185;0.0634)	all_epithelial(116;1.14e-19)|all_lung(118;1.22e-08)|Lung NSC(185;1.24e-06)|Renal(390;0.00183)|Breast(487;0.00354)|Hepatocellular(190;0.00826)|Myeloproliferative disorder(586;0.0122)|Ovarian(437;0.0308)|Medulloblastoma(700;0.123)|Lung SC(97;0.128)		Epithelial(90;1.09e-37)|OV - Ovarian serous cystadenocarcinoma(86;1.5e-23)|GBM - Glioblastoma multiforme(42;1.61e-08)|Colorectal(212;3.98e-05)|COAD - Colon adenocarcinoma(227;0.000193)|Kidney(185;0.00229)|BRCA - Breast invasive adenocarcinoma(365;0.00437)|STAD - Stomach adenocarcinoma(132;0.0134)|KIRC - Kidney renal clear cell carcinoma(229;0.034)|Lung(427;0.199)		GCTCCGGGCCGCACCTGGGCT	0.652000													3	37					0	0	1	0	0
FRG1BP	284802	broad.mit.edu	37	20	29628283	29628283	+	Silent	SNP	G	G	C			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr20:29628283G>C	ENST00000278882.3	+	6	665	c.285G>C	c.(283-285)ggG>ggC	p.G95G	FRG1B_ENST00000439954.2_Silent_p.G100G|FRG1B_ENST00000358464.4_Silent_p.G95G														p.G95G(4)		endometrium(10)|kidney(21)|lung(3)|pancreas(1)|prostate(9)|urinary_tract(9)	53						ATGAAGCAGGGGACATAGAAG	0.378000													5	75					0	0	1	0	0
NFE2L2	4780	broad.mit.edu	37	2	178095647	178095647	+	Missense_Mutation	SNP	G	G	A			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr2:178095647G>A	ENST00000397062.3	-	5	2238	c.1684C>T	c.(1684-1686)Ctc>Ttc	p.L562F	NFE2L2_ENST00000397063.4_Missense_Mutation_p.L546F|NFE2L2_ENST00000446151.2_Missense_Mutation_p.L539F|NFE2L2_ENST00000464747.1_Missense_Mutation_p.L546F	NM_006164.4	NP_006155.2	Q16236	NF2L2_HUMAN	nuclear factor, erythroid 2-like 2	562					transcription from RNA polymerase II promoter	centrosome|cytosol|nucleus|plasma membrane	protein dimerization activity|protein domain specific binding|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity			central_nervous_system(1)|cervix(4)|endometrium(14)|kidney(5)|large_intestine(4)|liver(13)|lung(71)|oesophagus(29)|skin(2)|upper_aerodigestive_tract(11)|urinary_tract(4)	158			Epithelial(96;0.00442)|OV - Ovarian serous cystadenocarcinoma(117;0.00739)|all cancers(119;0.0195)|LUSC - Lung squamous cell carcinoma(2;0.036)|Lung(16;0.0935)			AAAACTTCGAGATATAAGGTG	0.363000			Mis		"""NSCLC, HNSCC"""					HNSCC(56;0.16)			19	90					0	0	1	0	0
ANKRD44	91526	broad.mit.edu	37	2	197987396	197987396	+	Missense_Mutation	SNP	T	T	C			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr2:197987396T>C	ENST00000328737.2	-	7	672	c.596A>G	c.(595-597)cAt>cGt	p.H199R	ANKRD44_ENST00000450567.1_Missense_Mutation_p.H199R|ANKRD44_ENST00000409153.1_Missense_Mutation_p.H224R|ANKRD44_ENST00000409919.1_Missense_Mutation_p.H224R|ANKRD44_ENST00000337207.5_Missense_Mutation_p.H199R|ANKRD44_ENST00000282272.8_Missense_Mutation_p.H216R|ANKRD44_ENST00000539527.1_Missense_Mutation_p.H152R			Q8N8A2	ANR44_HUMAN	ankyrin repeat domain 44	224							protein binding			NS(1)|endometrium(3)|kidney(2)|large_intestine(9)|lung(20)|ovary(4)|skin(3)|stomach(1)|upper_aerodigestive_tract(2)	45			OV - Ovarian serous cystadenocarcinoma(117;0.246)			GTTCAGGAGATGCTTGACAAC	0.438000													6	62					0	0	1	0	0
DCN	1634	broad.mit.edu	37	12	91550888	91550888	+	Missense_Mutation	SNP	G	G	A			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr12:91550888G>A	ENST00000052754.5	-	5	1117	c.616C>T	c.(616-618)Cgc>Tgc	p.R206C	DCN_ENST00000393155.1_Missense_Mutation_p.R206C|DCN_ENST00000552962.1_Missense_Mutation_p.R206C|DCN_ENST00000420120.2_Missense_Mutation_p.R97C|DCN_ENST00000441303.2_Intron|DCN_ENST00000425043.1_Intron|DCN_ENST00000303320.3_Intron|DCN_ENST00000228329.5_Missense_Mutation_p.R97C|DCN_ENST00000456569.2_Intron|DCN_ENST00000547568.2_Intron	NM_001920.3	NP_001911.1	P07585	PGS2_HUMAN	decorin	206					organ morphogenesis	extracellular space				central_nervous_system(2)|cervix(1)|kidney(2)|large_intestine(4)|liver(1)|lung(8)|ovary(1)|skin(1)	20						TCAGCAATGCGGATGTAGGAG	0.378000													4	77					0	0	1	0	0
OSMR	9180	broad.mit.edu	37	5	38904125	38904128	+	Splice_Site	DEL	AAGT	AAGT	-			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr5:38904125_38904128delAAGT	ENST00000274276.3	+	8	1535_1536	c.1134_splice	c.e8+1	p.378_splice		NM_003999.2	NP_003990.1	Q99650	OSMR_HUMAN	oncostatin M receptor	378	Fibronectin type-III 1.				cell proliferation|positive regulation of cell proliferation	oncostatin-M receptor complex	growth factor binding|oncostatin-M receptor activity			NS(1)|breast(3)|central_nervous_system(2)|endometrium(1)|kidney(1)|large_intestine(8)|lung(20)|ovary(2)|pancreas(2)|prostate(1)|skin(3)|upper_aerodigestive_tract(2)	46	all_lung(31;0.000365)					AAAATGATGCAAGTAAGAACCCTG	0.343													11	25	---	---	---	---					
NLRC3	197358	broad.mit.edu	37	16	3594163	3594163	+	RNA	DEL	A	A	-	rs60164526		TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr16:3594163delA	ENST00000301749.7	-	0	3261				NLRC3_ENST00000603507.1_RNA|NLRC3_ENST00000359128.5_RNA|NLRC3_ENST00000448023.2_RNA|NLRC3_ENST00000419350.2_RNA	NM_178844.2	NP_849172.2	Q7RTR2	NLRC3_HUMAN	NLR family, CARD domain containing 3						I-kappaB kinase/NF-kappaB cascade|negative regulation of NF-kappaB transcription factor activity|T cell activation	cytoplasm	ATP binding			breast(1)|central_nervous_system(2)|endometrium(1)|kidney(3)|large_intestine(1)|liver(1)|lung(16)|ovary(2)|pancreas(2)|prostate(2)|skin(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	34						tgtctcgaggaaaaaaaaaaa	0.488													3	4	---	---	---	---					
NDUFS7	374291	broad.mit.edu	37	19	1395440	1395440	+	Frame_Shift_Del	DEL	A	A	-			TCGA-WB-A81G-01A-11D-A35I-08	TCGA-WB-A81G-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	5c9b49fb-6eb3-41d2-9bce-dcebb2310d46	a93253fb-3786-4518-9084-dcd9dab7bd9a	g.chr19:1395440delA	ENST00000233627.9	+	8	891	c.595delA	c.(595-597)ggfs	p.R199fs	NDUFS7_ENST00000313408.7_3'UTR|AC005329.7_ENST00000501448.1_RNA|NDUFS7_ENST00000540530.1_3'UTR	NM_024407.4	NP_077718.3	O75251	NDUS7_HUMAN	NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)	199					mitochondrial electron transport, NADH to ubiquinone|mitochondrial respiratory chain complex I assembly|transport	mitochondrial respiratory chain complex I	4 iron, 4 sulfur cluster binding|metal ion binding|NADH dehydrogenase (ubiquinone) activity|protein binding|quinone binding			ovary(1)	1		Acute lymphoblastic leukemia(61;5.61e-13)|all_hematologic(61;2.65e-08)|Breast(49;0.00186)|Lung NSC(49;0.00292)|all_lung(49;0.00419)		UCEC - Uterine corpus endometrioid carcinoma (162;6.64e-05)|OV - Ovarian serous cystadenocarcinoma(105;1.09e-113)|Epithelial(107;3.79e-112)|all cancers(105;1.67e-104)|BRCA - Breast invasive adenocarcinoma(158;0.00136)|STAD - Stomach adenocarcinoma(1328;0.18)	NADH(DB00157)	GCAGCTGCAGAGGAAGATCAA	0.706													2	4	---	---	---	---