Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
ASB9	140462	broad.mit.edu	37	X	15267054	15267054	+	Missense_Mutation	SNP	G	G	A			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chrX:15267054G>A	ENST00000546332.1	-	7	1055	c.572C>T	c.(571-573)gCg>gTg	p.A191V	ASB9_ENST00000380488.4_Missense_Mutation_p.A191V|ASB9_ENST00000473862.1_5'UTR|ASB9_ENST00000380485.3_Missense_Mutation_p.A191V|ASB9_ENST00000380483.3_Missense_Mutation_p.A181V	NM_001168531.1	NP_001162003.1	Q96DX5	ASB9_HUMAN	ankyrin repeat and SOCS box containing 9	191					intracellular signal transduction					breast(1)|cervix(1)|kidney(1)|large_intestine(2)|lung(10)	15	Hepatocellular(33;0.183)					GTTCACGTCCGCTCCTAAACA	0.532000													12	22					0	0	1	0	0
ESPNP	284729	broad.mit.edu	37	1	17017717	17017717	+	RNA	SNP	C	C	T	rs12561804	by1000genomes	TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr1:17017717C>T	ENST00000492551.1	-	0	2010					NR_026567.1																						GCTCACCTCTCTTCTTCCAGC	0.622000													9	24					0	0	1	0	0
MDC1	9656	broad.mit.edu	37	6	30680011	30680011	+	Missense_Mutation	SNP	C	C	T			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr6:30680011C>T	ENST00000376406.3	-	5	2355	c.1708G>A	c.(1708-1710)Gcc>Acc	p.A570T	MDC1-AS1_ENST00000442150.1_RNA|MDC1_ENST00000376405.2_Missense_Mutation_p.A570T	NM_014641.2	NP_055456.2	Q14676	MDC1_HUMAN	mediator of DNA-damage checkpoint 1	570					cell cycle|double-strand break repair via homologous recombination|intra-S DNA damage checkpoint	focal adhesion|nucleoplasm	FHA domain binding|protein C-terminus binding			breast(2)|kidney(1)|ovary(1)	4						AGAGGCCAGGCTTCCTCTAGA	0.507000								Other conserved DNA damage response genes					7	64					0	0	1	0	0
RPL34	6164	broad.mit.edu	37	4	109543293	109543293	+	Missense_Mutation	SNP	T	T	G			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr4:109543293T>G	ENST00000394668.2	+	3	164	c.98T>G	c.(97-99)cTt>cGt	p.L33R	RPL34_ENST00000394667.3_Missense_Mutation_p.L33R|RPL34_ENST00000394665.1_Missense_Mutation_p.L33R|RPL34_ENST00000502534.1_Missense_Mutation_p.L33R|RPL34_ENST00000506397.1_Missense_Mutation_p.L33R	NM_033625.2	NP_296374.1	P49207	RL34_HUMAN	ribosomal protein L34	33					endocrine pancreas development|translational elongation|translational termination|viral transcription	cytosolic large ribosomal subunit	protein binding|RNA binding|structural constituent of ribosome			kidney(2)|lung(1)|upper_aerodigestive_tract(1)	4		Hepatocellular(203;0.217)		OV - Ovarian serous cystadenocarcinoma(123;0.000286)		ATTGTTTACCTTTATACCAAG	0.413000													5	74					0	0	1	0	0
DNM1P47	100216544	broad.mit.edu	37	15	102303120	102303120	+	RNA	SNP	C	C	G			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr15:102303120C>G	ENST00000561463.1	+	0	11166																											CTTCTCAGAGCTGCTGTCCAA	0.592000													3	34					0	0	1	0	0
CSDE1	7812	broad.mit.edu	37	1	115272878	115272878	+	Splice_Site	SNP	C	C	T			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr1:115272878C>T	ENST00000438362.2	-	12	1873		c.e12+1		CSDE1_ENST00000369530.1_Splice_Site|CSDE1_ENST00000530886.1_Splice_Site|CSDE1_ENST00000261443.5_Splice_Site|CSDE1_ENST00000358528.4_Splice_Site|CSDE1_ENST00000339438.6_Splice_Site|CSDE1_ENST00000534699.1_Splice_Site	NM_001242891.1	NP_001229820.1	O75534	CSDE1_HUMAN	cold shock domain containing E1, RNA-binding						male gonad development|regulation of transcription, DNA-dependent	cytoplasm	DNA binding|protein binding|RNA binding			NS(1)|breast(4)|endometrium(11)|kidney(2)|large_intestine(12)|lung(17)|ovary(2)|skin(1)|upper_aerodigestive_tract(1)	51	all_epithelial(7;5.11e-05)|all_lung(7;0.000179)|Lung NSC(6;0.00195)|Lung SC(450;0.211)	all_cancers(81;2.21e-07)|all_epithelial(167;4.2e-07)|all_lung(203;9.97e-06)|Lung NSC(69;1.74e-05)		Lung(183;0.0234)|Colorectal(144;0.0686)|COAD - Colon adenocarcinoma(174;0.111)|all cancers(265;0.112)|Epithelial(280;0.124)|LUSC - Lung squamous cell carcinoma(189;0.133)		GCAAAACCTACCTTCTCTTTG	0.368000													10	71					0	0	1	0	0
BTBD10	84280	broad.mit.edu	37	11	13441043	13441043	+	Missense_Mutation	SNP	G	G	C			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr11:13441043G>C	ENST00000278174.5	-	4	793	c.548C>G	c.(547-549)tCc>tGc	p.S183C	BTBD10_ENST00000530907.1_Missense_Mutation_p.S191C|BTBD10_ENST00000532261.1_5'UTR|BTBD10_ENST00000528120.1_Missense_Mutation_p.S135C	NM_032320.5	NP_115696.2	Q9BSF8	BTBDA_HUMAN	BTB (POZ) domain containing 10	183	BTB.					nucleus				cervix(1)|endometrium(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(8)|lung(7)|prostate(1)	20				Epithelial(150;0.0214)		AGTAAAAATGGATGGGTCTAC	0.338000													7	108					0	0	1	0	0
EP400	57634	broad.mit.edu	37	12	132547138	132547138	+	Silent	SNP	A	A	G	rs35873108	byFrequency	TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr12:132547138A>G	ENST00000333577.4	+	48	8443	c.8334A>G	c.(8332-8334)caA>caG	p.Q2778Q	EP400_ENST00000389561.2_Silent_p.Q2742Q|EP400_ENST00000330386.6_Silent_p.Q2661Q|EP400_ENST00000389562.2_Silent_p.Q2741Q|EP400_ENST00000332482.4_Silent_p.Q2705Q			Q96L91	EP400_HUMAN	E1A binding protein p400	2778	Interaction with ZNF42 (By similarity).|Poly-Gln.				histone H2A acetylation|histone H4 acetylation|regulation of transcription, DNA-dependent	NuA4 histone acetyltransferase complex|nuclear speck	ATP binding|DNA binding|helicase activity	p.Q2741Q(3)|p.Q2742Q(1)		NS(1)|breast(6)|central_nervous_system(10)|cervix(1)|endometrium(21)|kidney(13)|large_intestine(25)|lung(56)|ovary(5)|prostate(8)|skin(6)|stomach(4)|upper_aerodigestive_tract(2)|urinary_tract(3)	161	all_neural(191;0.0982)|Medulloblastoma(191;0.163)	all_epithelial(31;0.198)		OV - Ovarian serous cystadenocarcinoma(86;3.01e-08)|Epithelial(86;3.43e-07)|all cancers(50;2.01e-06)		agcagcagcaacagcagcagc	0.602000													3	37					0	0	1	0	0
TM9SF4	9777	broad.mit.edu	37	20	30732974	30732974	+	Nonsense_Mutation	SNP	G	G	T			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr20:30732974G>T	ENST00000217315.5	+	7	1022	c.682G>T	c.(682-684)Gag>Tag	p.E228*	TM9SF4_ENST00000398022.2_Nonsense_Mutation_p.E245*			Q92544	TM9S4_HUMAN	transmembrane 9 superfamily protein member 4	245						integral to membrane				central_nervous_system(2)|kidney(1)|large_intestine(4)|lung(8)|pancreas(1)|skin(2)|upper_aerodigestive_tract(1)|urinary_tract(1)	20			UCEC - Uterine corpus endometrioid carcinoma (5;0.0241)			CCCCACCAAGGAGAATCAGCT	0.557000													11	64					0.00829132	0.00852163	1	1	0
A2M	2	broad.mit.edu	37	12	9242536	9242536	+	Missense_Mutation	SNP	C	C	T			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr12:9242536C>T	ENST00000318602.7	-	21	2987	c.2680G>A	c.(2680-2682)Gga>Aga	p.G894R		NM_000014.4	NP_000005.2	P01023	A2MG_HUMAN	alpha-2-macroglobulin	894					blood coagulation, intrinsic pathway|negative regulation of complement activation, lectin pathway|platelet activation|platelet degranulation|regulation of small GTPase mediated signal transduction|small GTPase mediated signal transduction	cytosol|extracellular space|platelet alpha granule lumen	enzyme binding|GTPase activator activity|interleukin-1 binding|interleukin-8 binding|serine-type endopeptidase inhibitor activity|tumor necrosis factor binding			breast(1)|central_nervous_system(6)|cervix(1)|endometrium(5)|kidney(6)|large_intestine(17)|lung(30)|ovary(1)|skin(3)|stomach(1)|upper_aerodigestive_tract(3)|urinary_tract(3)	77					Bacitracin(DB00626)|Becaplermin(DB00102)	TCTTTCCTTCCGTGTTCAGGA	0.393000													11	65					0	0	1	0	0
KSR1	8844	broad.mit.edu	37	17	25932726	25932726	+	Silent	SNP	C	C	T			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr17:25932726C>T	ENST00000398988.3	+	16	1981	c.1536C>T	c.(1534-1536)gaC>gaT	p.D512D	KSR1_ENST00000509603.2_Silent_p.D627D|KSR1_ENST00000268763.6_Silent_p.D512D|KSR1_ENST00000319524.6_Silent_p.D649D	NM_014238.1	NP_055053.1	Q8IVT5	KSR1_HUMAN	kinase suppressor of ras 1	647					Ras protein signal transduction	cytoplasm|membrane	ATP binding|metal ion binding|protein binding|protein serine/threonine kinase activity			NS(1)|breast(1)|central_nervous_system(1)|endometrium(5)|large_intestine(5)|lung(12)|prostate(2)|urinary_tract(1)	28	Lung NSC(42;0.00836)		BRCA - Breast invasive adenocarcinoma(3;0.00122)	UCEC - Uterine corpus endometrioid carcinoma (53;0.168)		ACAACCAGGACCACCTGAAGC	0.667000													11	20					0	0	1	0	0
TTN	7273	broad.mit.edu	37	2	179418227	179418227	+	Splice_Site	SNP	A	A	T			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr2:179418227A>T	ENST00000589042.1	-	334	89728		c.e334+1		TTN-AS1_ENST00000438095.1_RNA|TTN_ENST00000460472.2_Splice_Site|TTN-AS1_ENST00000592750.1_RNA|TTN-AS1_ENST00000590807.1_RNA|TTN_ENST00000359218.5_Splice_Site|TTN-AS1_ENST00000590932.1_RNA|TTN_ENST00000591111.1_Splice_Site|TTN_ENST00000342992.6_Splice_Site|TTN-AS1_ENST00000592600.1_RNA|TTN-AS1_ENST00000592630.1_RNA|TTN-AS1_ENST00000591332.1_RNA|TTN-AS1_ENST00000592689.1_RNA|TTN_ENST00000342175.6_Splice_Site|TTN-AS1_ENST00000456053.1_RNA|TTN-AS1_ENST00000419746.1_RNA|TTN-AS1_ENST00000586707.1_RNA|TTN-AS1_ENST00000585451.1_RNA|TTN-AS1_ENST00000586452.1_RNA|TTN-AS1_ENST00000586831.1_RNA	NM_001267550.1	NP_001254479.1	Q8WZ42	TITIN_HUMAN	titin								ATP binding|nucleic acid binding|protein serine/threonine kinase activity|protein tyrosine kinase activity			NS(24)|autonomic_ganglia(1)|breast(64)|central_nervous_system(14)|cervix(14)|endometrium(96)|haematopoietic_and_lymphoid_tissue(16)|kidney(91)|large_intestine(303)|liver(1)|lung(595)|ovary(58)|pancreas(17)|prostate(38)|skin(60)|stomach(29)|upper_aerodigestive_tract(1)|urinary_tract(26)	1448			OV - Ovarian serous cystadenocarcinoma(117;0.023)|Epithelial(96;0.0454)|all cancers(119;0.134)			GTAGGTACATACCAAGTATAT	0.343000													12	71					0	0	1	0	0
CALCRL	10203	broad.mit.edu	37	2	188211041	188211041	+	Missense_Mutation	SNP	G	G	A			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr2:188211041G>A	ENST00000409998.1	-	16	2037	c.1256C>T	c.(1255-1257)gCg>gTg	p.A419V	CALCRL_ENST00000410068.1_Missense_Mutation_p.A419V|CALCRL_ENST00000392370.3_Missense_Mutation_p.A419V|AC007319.1_ENST00000453517.1_RNA|AC007319.1_ENST00000412276.1_RNA			Q16602	CALRL_HUMAN	calcitonin receptor-like	419						integral to plasma membrane				endometrium(1)|large_intestine(7)|lung(21)|ovary(1)|prostate(1)|skin(1)	32			OV - Ovarian serous cystadenocarcinoma(117;0.0554)|Epithelial(96;0.227)			TGTGTAAGACGCACTACGAAG	0.373000													10	73					0	0	1	0	0
ZNF324	25799	broad.mit.edu	37	19	58983066	58983066	+	Missense_Mutation	SNP	G	G	A			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr19:58983066G>A	ENST00000536459.2	+	4	1916	c.1207G>A	c.(1207-1209)Ggt>Agt	p.G403S	ZNF324_ENST00000535298.1_Missense_Mutation_p.G180S|ZNF324_ENST00000196482.3_Missense_Mutation_p.G403S			O75467	Z324A_HUMAN	zinc finger protein 324	403					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			breast(3)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(3)|liver(1)|lung(2)|prostate(2)|urinary_tract(2)	16		all_cancers(17;1.81e-17)|all_epithelial(17;1.21e-12)|Lung NSC(17;2.8e-05)|all_lung(17;0.000139)|Colorectal(82;0.000147)|Renal(17;0.00528)|all_neural(62;0.0133)|Ovarian(87;0.156)|Medulloblastoma(540;0.232)		UCEC - Uterine corpus endometrioid carcinoma (67;0.168)|GBM - Glioblastoma multiforme(193;0.0164)|Lung(386;0.179)		CGCGCTCTGCGGTGCTGCCTT	0.662000													3	54					0	0	1	0	0
UBN1	29855	broad.mit.edu	37	16	4920308	4920308	+	Missense_Mutation	SNP	T	T	G			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr16:4920308T>G	ENST00000396658.4	+	8	1980	c.1277T>G	c.(1276-1278)cTc>cGc	p.L426R	UBN1_ENST00000590769.1_Missense_Mutation_p.L426R|UBN1_ENST00000545171.1_Missense_Mutation_p.L426R|UBN1_ENST00000585857.1_3'UTR|UBN1_ENST00000262376.6_Missense_Mutation_p.L426R	NM_016936.3	NP_058632.2	Q9NPG3	UBN1_HUMAN	ubinuclein 1	426					chromatin modification|interspecies interaction between organisms|regulation of transcription from RNA polymerase II promoter	PML body|tight junction	DNA binding|sequence-specific DNA binding transcription factor activity			NS(1)|endometrium(6)|kidney(4)|large_intestine(10)|lung(12)|prostate(1)|skin(3)|upper_aerodigestive_tract(1)	38						GATGCCCTGCTCAAGCGTGCT	0.572000													6	41					0	0	1	0	0
PSD4	23550	broad.mit.edu	37	2	113940295	113940295	+	Missense_Mutation	SNP	C	C	G			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr2:113940295C>G	ENST00000245796.6	+	2	457	c.262C>G	c.(262-264)Cag>Gag	p.Q88E	PSD4_ENST00000441564.2_Missense_Mutation_p.Q88E|PSD4_ENST00000465917.1_3'UTR	NM_012455.2	NP_036587.2	Q8NDX1	PSD4_HUMAN	pleckstrin and Sec7 domain containing 4	88					regulation of ARF protein signal transduction	cytoplasm|plasma membrane	ARF guanyl-nucleotide exchange factor activity			cervix(1)|endometrium(2)|large_intestine(4)|lung(13)|ovary(4)|skin(2)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	29						GGAGCCTTGCCAGGAGCAAAC	0.637000													7	45					0	0	1	0	0
PTGS1	5742	broad.mit.edu	37	9	125140786	125140786	+	Missense_Mutation	SNP	C	C	T			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr9:125140786C>T	ENST00000362012.2	+	4	291	c.286C>T	c.(286-288)Cgc>Tgc	p.R96C	PTGS1_ENST00000540753.1_Missense_Mutation_p.R71C|PTGS1_ENST00000223423.4_Missense_Mutation_p.R96C|PTGS1_ENST00000373698.5_5'UTR	NM_000962.2|NM_001271164.1|NM_080591.1	NP_000953.2|NP_001258093.1|NP_542158.1	P23219	PGH1_HUMAN	prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	96					cyclooxygenase pathway|hormone biosynthetic process|regulation of blood pressure|response to oxidative stress|xenobiotic metabolic process	endoplasmic reticulum membrane|Golgi apparatus|microsome|plasma membrane	heme binding|oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen|peroxidase activity|prostaglandin-endoperoxide synthase activity			large_intestine(3)|ovary(1)|skin(2)|stomach(1)|upper_aerodigestive_tract(1)	8					Acetaminophen(DB00316)|Aspirin(DB00945)|Balsalazide(DB01014)|Bromfenac(DB00963)|Ciclopirox(DB01188)|Diclofenac(DB00586)|Diflunisal(DB00861)|Dipyrone(DB04817)|Etodolac(DB00749)|Fenoprofen(DB00573)|Flurbiprofen(DB00712)|gamma-Homolinolenic acid(DB00154)|Ibuprofen(DB01050)|Icosapent(DB00159)|Indomethacin(DB00328)|Ketoprofen(DB01009)|Ketorolac(DB00465)|Lumiracoxib(DB01283)|Meclofenamic acid(DB00939)|Mefenamic acid(DB00784)|Mesalazine(DB00244)|Minoxidil(DB00350)|Nabumetone(DB00461)|Naproxen(DB00788)|Phenacetin(DB03783)|Piroxicam(DB00554)|Rofecoxib(DB00533)|Salicyclic acid(DB00936)|Salsalate(DB01399)|Sulindac(DB00605)|Suprofen(DB00870)|Tenoxicam(DB00469)|Tolmetin(DB00500)	CACTCACGGGCGCTGGTTCTG	0.632000													7	70					0	0	1	0	0
HLA-A	3105	broad.mit.edu	37	6	29910693	29910693	+	Missense_Mutation	SNP	A	A	G	rs41559716	by1000genomes	TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr6:29910693A>G	ENST00000396634.1	+	4	574	c.233A>G	c.(232-234)cAg>cGg	p.Q78R	HLA-A_ENST00000376806.5_Missense_Mutation_p.Q78R|HLA-A_ENST00000376802.2_Missense_Mutation_p.Q78R|HLA-A_ENST00000376809.5_Missense_Mutation_p.Q78R			P30443	1A01_HUMAN	major histocompatibility complex, class I, A	78	Alpha-1.				antigen processing and presentation of peptide antigen via MHC class I|interferon-gamma-mediated signaling pathway|interspecies interaction between organisms|regulation of immune response|type I interferon-mediated signaling pathway	integral to plasma membrane|MHC class I protein complex	MHC class I receptor activity	p.Q78R(2)		central_nervous_system(2)|cervix(1)|endometrium(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(3)|lung(10)|ovary(1)|prostate(2)|skin(1)|upper_aerodigestive_tract(5)|urinary_tract(2)	30						TGGATAGAGCAGGAGGGGCCG	0.657000									Osteosarcoma, Familial Clustering of;Naso-/Oropharyngeal/Laryngeal Cancer, Familial Clustering of;Melanoma, Familial Clustering of;Lichen Sclerosis et Atrophicus, Familial Clustering of	Multiple Myeloma(9;0.094)			4	24					0	0	1	0	0
DST	667	broad.mit.edu	37	6	56504748	56504748	+	Silent	SNP	G	G	A			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr6:56504748G>A	ENST00000370754.5	-	18	2498	c.2499C>T	c.(2497-2499)ctC>ctT	p.L833L	DST_ENST00000370769.4_Silent_p.L655L|DST_ENST00000370788.2_Silent_p.L655L|DST_ENST00000446842.2_Silent_p.L329L|DST_ENST00000361203.3_Silent_p.L655L|DST_ENST00000370765.6_Silent_p.L329L|DST_ENST00000421834.2_Silent_p.L655L|DST_ENST00000312431.6_Silent_p.L655L|DST_ENST00000518935.1_Silent_p.L329L|DST_ENST00000244364.6_Silent_p.L329L			Q03001	DYST_HUMAN	dystonin	655					cell adhesion|cell cycle arrest|cell motility|hemidesmosome assembly|integrin-mediated signaling pathway|intermediate filament cytoskeleton organization|maintenance of cell polarity|microtubule cytoskeleton organization|response to wounding	actin cytoskeleton|axon|axon part|basement membrane|cell cortex|cell leading edge|cytoplasmic membrane-bounded vesicle|endoplasmic reticulum membrane|hemidesmosome|integral to membrane|intermediate filament|intermediate filament cytoskeleton|microtubule cytoskeleton|microtubule plus end|nuclear envelope|sarcomere|Z disc	actin binding|calcium ion binding|integrin binding|microtubule plus-end binding|protein binding|protein C-terminus binding|protein homodimerization activity			NS(1)|breast(5)|central_nervous_system(8)|cervix(1)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(5)|large_intestine(22)|lung(43)|ovary(7)|prostate(1)|skin(4)|upper_aerodigestive_tract(3)	105	Lung NSC(77;0.103)		LUSC - Lung squamous cell carcinoma(124;0.0485)|Lung(124;0.0956)			TAGCTTCTTTGAGACTAGATT	0.323000													23	104					0	0	1	0	0
MUC17	140453	broad.mit.edu	37	7	100682737	100682737	+	Missense_Mutation	SNP	C	C	A	rs71286275		TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr7:100682737C>A	ENST00000306151.4	+	3	8104	c.8040C>A	c.(8038-8040)agC>agA	p.S2680R		NM_001040105.1	NP_001035194.1	Q685J3	MUC17_HUMAN	mucin 17, cell surface associated	2680	59 X approximate tandem repeats.|Ser-rich.					extracellular region|integral to membrane|plasma membrane	extracellular matrix constituent, lubricant activity			NS(3)|breast(14)|central_nervous_system(2)|cervix(2)|endometrium(27)|haematopoietic_and_lymphoid_tissue(2)|kidney(18)|large_intestine(28)|lung(179)|ovary(19)|pancreas(1)|prostate(13)|skin(26)|stomach(2)|upper_aerodigestive_tract(3)|urinary_tract(4)	343	Lung NSC(181;0.136)|all_lung(186;0.182)					CTGAAGGTAGCAGCATGCCAA	0.488000													9	338					7.48243e-07	8.14264e-07	1	1	0
FRG1BP	284802	broad.mit.edu	37	20	29625941	29625941	+	Missense_Mutation	SNP	A	A	T			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr20:29625941A>T	ENST00000278882.3	+	5	565	c.185A>T	c.(184-186)gAt>gTt	p.D62V	FRG1B_ENST00000358464.4_Missense_Mutation_p.D62V|FRG1B_ENST00000439954.2_Missense_Mutation_p.D67V														p.D62V(2)		endometrium(10)|kidney(21)|lung(3)|pancreas(1)|prostate(9)|urinary_tract(9)	53						GGGCATTCAGATGCAATTGGA	0.333000													6	152					0	0	1	0	0
IGHV1-45	28466	broad.mit.edu	37	14	106963220	106963220	+	RNA	SNP	A	A	C			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr14:106963220A>C	ENST00000390621.2	-	0	119																											CACCAGCTGCATCTGGGAGTA	0.567000													12	85					0	0	1	0	0
APC	324	broad.mit.edu	37	5	112176079	112176079	+	Missense_Mutation	SNP	G	G	C			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr5:112176079G>C	ENST00000457016.1	+	16	5168	c.4788G>C	c.(4786-4788)caG>caC	p.Q1596H	APC_ENST00000257430.4_Missense_Mutation_p.Q1596H|CTC-554D6.1_ENST00000520401.1_Intron|APC_ENST00000508376.2_Missense_Mutation_p.Q1596H			P25054	APC_HUMAN	adenomatous polyposis coli	1596	Ser-rich.				canonical Wnt receptor signaling pathway|cell adhesion|cell cycle arrest|cell migration|cellular component disassembly involved in apoptosis|cytokinesis after mitosis|mitotic cell cycle spindle assembly checkpoint|negative regulation of canonical Wnt receptor signaling pathway|negative regulation of cyclin-dependent protein kinase activity|negative regulation of microtubule depolymerization|positive regulation of apoptosis|positive regulation of cell migration|positive regulation of pseudopodium assembly|protein complex assembly|regulation of attachment of spindle microtubules to kinetochore|response to DNA damage stimulus|tight junction assembly	adherens junction|APC-Axin-1-beta-catenin complex|Axin-APC-beta-catenin-GSK3B complex|beta-catenin destruction complex|centrosome|cytosol|kinetochore|lamellipodium|lateral plasma membrane|nucleus|ruffle membrane|tight junction	beta-catenin binding|gamma-catenin binding|microtubule plus-end binding|protein kinase binding|protein kinase regulator activity	p.K1192fs*3(1)|p.?(1)		NS(7)|adrenal_gland(6)|biliary_tract(5)|bone(6)|breast(29)|central_nervous_system(12)|cervix(2)|endometrium(12)|haematopoietic_and_lymphoid_tissue(6)|kidney(8)|large_intestine(2768)|liver(15)|lung(39)|oesophagus(1)|ovary(12)|pancreas(27)|prostate(15)|salivary_gland(2)|skin(14)|small_intestine(34)|soft_tissue(55)|stomach(136)|thyroid(22)|upper_aerodigestive_tract(8)|urinary_tract(20)	3261		all_cancers(142;3.01e-27)|all_epithelial(76;2.3e-18)|all_hematologic(541;4.32e-09)|Ovarian(225;1.78e-06)|Lung NSC(167;0.000195)|Breast(839;0.000231)|all_lung(232;0.000247)|Colorectal(10;0.000355)|Prostate(80;0.00133)		OV - Ovarian serous cystadenocarcinoma(64;1.09e-113)|Epithelial(69;3.79e-112)|all cancers(49;1.67e-104)|BRCA - Breast invasive adenocarcinoma(61;0.00136)|COAD - Colon adenocarcinoma(37;0.00155)|Colorectal(14;0.00191)		AGCCAGCCCAGACTGCTTCAA	0.403000		12	"""D, Mis, N, F, S"""		"""colorectal, pancreatic, desmoid, hepatoblastoma, glioma, other CNS"""	"""colorectal, pancreatic, desmoid, hepatoblastoma, glioma, other CNS"""			Turcot syndrome;Hereditary Desmoid Disease;Familial Adenomatous Polyposis	TSP Lung(16;0.13)			28	130					0	0	1	0	0
ITLN2	142683	broad.mit.edu	37	1	160920865	160920865	+	Missense_Mutation	SNP	A	A	T	rs141731306		TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr1:160920865A>T	ENST00000368029.3	-	4	466	c.409T>A	c.(409-411)Tct>Act	p.S137T		NM_080878.2	NP_543154.1	Q8WWU7	ITLN2_HUMAN	intelectin 2	137	Fibrinogen C-terminal.				signal transduction	extracellular region	receptor binding|sugar binding			endometrium(4)|large_intestine(4)|lung(5)|ovary(1)|pancreas(1)|skin(2)|stomach(1)|urinary_tract(1)	19	all_cancers(52;2.99e-17)|all_hematologic(112;0.093)		BRCA - Breast invasive adenocarcinoma(70;0.00275)			GCCTCTGCAGATCCAAAGGTG	0.597000													13	97					0	0	1	0	0
CRAMP1L	57585	broad.mit.edu	37	16	1723958	1723958	+	Missense_Mutation	SNP	A	A	G			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr16:1723958A>G	ENST00000397412.3	+	21	3821	c.3722A>G	c.(3721-3723)cAa>cGa	p.Q1241R	CRAMP1L_ENST00000262317.4_Missense_Mutation_p.Q616R|CRAMP1L_ENST00000293925.5_Missense_Mutation_p.Q1241R|LA16c-431H6.6_ENST00000454337.1_3'UTR|CRAMP1L_ENST00000436138.3_Missense_Mutation_p.Q1238R			Q96RY5	CRML_HUMAN	Crm, cramped-like (Drosophila)	1241	Ser-rich.					nucleus	DNA binding			NS(2)|breast(1)|central_nervous_system(1)|cervix(1)|endometrium(6)|kidney(1)|large_intestine(3)|lung(6)|pancreas(1)	22						GACCTGGCCCAAGAGCTGTCC	0.562000													10	65					0	0	1	0	0
ALDH2	217	broad.mit.edu	37	12	112223106	112223106	+	Nonsense_Mutation	SNP	C	C	A			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr12:112223106C>A	ENST00000546840.2	+	5	386	c.386C>A	c.(385-387)tCa>tAa	p.S129*	ALDH2_ENST00000416293.3_Silent_p.V85V|ALDH2_ENST00000261733.2_Silent_p.V132V																							AGCCCTATGTCATCTCCTACC	0.517000													16	91					8.00594e-06	8.46342e-06	1	1	0
ALS2	57679	broad.mit.edu	37	2	202606482	202606482	+	Silent	SNP	A	A	G			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr2:202606482A>G	ENST00000264276.6	-	11	2638	c.2266T>C	c.(2266-2268)Ttg>Ctg	p.L756L	ALS2_ENST00000457679.2_Silent_p.L68L	NM_020919.3	NP_065970.2	Q96Q42	ALS2_HUMAN	amyotrophic lateral sclerosis 2 (juvenile)	756	DH.				cell death|endosome organization|positive regulation of Rac GTPase activity|regulation of endosome size	centrosome|cytosol|early endosome|growth cone|lamellipodium|protein complex|ruffle	protein homodimerization activity|protein serine/threonine kinase activator activity|Rab GTPase binding|Rab guanyl-nucleotide exchange factor activity|Rac guanyl-nucleotide exchange factor activity|Ran guanyl-nucleotide exchange factor activity			NS(1)|breast(1)|central_nervous_system(2)|endometrium(11)|haematopoietic_and_lymphoid_tissue(1)|kidney(6)|large_intestine(15)|lung(22)|ovary(1)|prostate(4)|skin(6)|stomach(1)|upper_aerodigestive_tract(1)	72						AAGCTGCTCAATGAGGCTCCA	0.473000													5	35					0	0	1	0	0
THSD7A	221981	broad.mit.edu	37	7	11514012	11514012	+	Missense_Mutation	SNP	G	G	C			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr7:11514012G>C	ENST00000423059.3	-	8	2452	c.2201C>G	c.(2200-2202)aCa>aGa	p.T734R	AC004538.3_ENST00000445839.1_RNA	NM_015204.2	NP_056019.1	Q9UPZ6	THS7A_HUMAN	thrombospondin, type I, domain containing 7A	734	TSP type-1 7.					integral to membrane				NS(1)|autonomic_ganglia(1)|breast(5)|cervix(1)|endometrium(8)|kidney(2)|large_intestine(7)|lung(68)|ovary(3)|pancreas(1)|prostate(2)|skin(2)|stomach(1)|upper_aerodigestive_tract(11)	113				UCEC - Uterine corpus endometrioid carcinoma (126;0.163)		GACTTTTCTTGTCTGCATGCC	0.512000										HNSCC(18;0.044)			3	62					0	0	1	0	0
SLC4A2	6522	broad.mit.edu	37	7	150768535	150768535	+	Silent	SNP	G	G	A			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr7:150768535G>A	ENST00000485713.1	+	14	3074	c.2034G>A	c.(2032-2034)acG>acA	p.T678T	SLC4A2_ENST00000392826.2_Silent_p.T669T|SLC4A2_ENST00000413384.2_Silent_p.T678T|SLC4A2_ENST00000461735.1_Silent_p.T664T|SLC4A2_ENST00000310317.5_Silent_p.T596T	NM_001199692.1	NP_001186621.1	P04920	B3A2_HUMAN	solute carrier family 4 (anion exchanger), member 2	678				AAGAAEDDPLRRTGRP -> RQGQLKMIPSADGAA (in Ref. 1; CAA44067 and 6; CAA27556).	bicarbonate transport	integral to membrane|membrane fraction	inorganic anion exchanger activity			NS(1)|central_nervous_system(2)|endometrium(3)|kidney(1)|large_intestine(2)|liver(2)|lung(14)|prostate(3)|skin(2)|upper_aerodigestive_tract(2)|urinary_tract(1)	33			OV - Ovarian serous cystadenocarcinoma(82;0.0121)	UCEC - Uterine corpus endometrioid carcinoma (81;0.168)		TTCGGCGGACGGGGCGGCCCT	0.677000													7	16					0	0	1	0	0
RPTN	126638	broad.mit.edu	37	1	152127903	152127903	+	Frame_Shift_Del	DEL	G	G	-			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr1:152127903delG	ENST00000316073.3	-	3	1736	c.1672delC	c.(1672-1674)acfs	p.H558fs		NM_001122965.1	NP_001116437.1	Q6XPR3	RPTN_HUMAN	repetin	558	Gln-rich.					proteinaceous extracellular matrix	calcium ion binding	p.H558D(1)		breast(2)|central_nervous_system(1)|endometrium(14)|kidney(2)|large_intestine(1)|lung(32)|prostate(1)|skin(4)|stomach(1)|upper_aerodigestive_tract(1)	59						TGACCGTAGTGGGAACTCTGG	0.507													7	810	---	---	---	---					
ASH1L	55870	broad.mit.edu	37	1	155340331	155340340	+	Frame_Shift_Del	DEL	TTGATGAATC	TTGATGAATC	-			TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr1:155340331_155340340delTTGATGAATC	ENST00000368346.3	-	12	7295_7304	c.6656_6665delGATTCATCAA	c.(6655-6666)ccfs	p.RFIN2219fs	ASH1L_ENST00000392403.3_Frame_Shift_Del_p.RFIN2214fs			Q9NR48	ASH1L_HUMAN	ash1 (absent, small, or homeotic)-like (Drosophila)	2219	SET.				cell-cell signaling|DNA packaging|regulation of transcription, DNA-dependent|transcription from RNA polymerase II promoter	chromosome|Golgi apparatus|nucleus|tight junction	DNA binding|histone-lysine N-methyltransferase activity|zinc ion binding			autonomic_ganglia(1)|breast(4)|central_nervous_system(1)|endometrium(12)|kidney(13)|large_intestine(28)|lung(39)|ovary(2)|pancreas(1)|prostate(6)|skin(11)|upper_aerodigestive_tract(2)|urinary_tract(4)	124	Hepatocellular(266;0.0997)|all_neural(408;0.129)|all_hematologic(923;0.145)		Epithelial(20;1.74e-08)|all cancers(21;3.29e-08)|BRCA - Breast invasive adenocarcinoma(34;0.021)			ACAGCTATGGTTGATGAATCGGGCCTCATT	0.448													15	203	---	---	---	---					
CCR4	1233	broad.mit.edu	37	3	32995645	32995659	+	In_Frame_Del	DEL	TCTTTGCCGTGGTGG	TCTTTGCCGTGGTGG	-	rs147951720	byFrequency	TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr3:32995645_32995659delTCTTTGCCGTGGTGG	ENST00000330953.5	+	2	899_913	c.731_745delTCTTTGCCGTGGTGG	c.(730-747)atc>a	p.IFAVVV244del		NM_005508.4	NP_005499.1	P51679	CCR4_HUMAN	chemokine (C-C motif) receptor 4	244					chemotaxis|elevation of cytosolic calcium ion concentration|immune response|inflammatory response	integral to plasma membrane				NS(1)|kidney(1)|large_intestine(2)|lung(7)|prostate(1)|skin(3)|stomach(1)	16						GTGAAGATGATCTTTGCCGTGGTGGTCCTCTTCCT	0.470													17	23	---	---	---	---					
BAGE2	85319	broad.mit.edu	37	21	11085901	11085903	+	RNA	DEL	CAT	CAT	-	rs28477888		TCGA-S7-A7WT-01A-12D-A35I-08	TCGA-S7-A7WT-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	104e94c6-55c9-4957-b1ae-9a592158d0e3	a6647b15-29af-4228-bc47-202916482c4d	g.chr21:11085901_11085903delCAT	ENST00000470054.1	-	0	324									B melanoma antigen family, member 2															Colorectal(6;3.44e-05)|COAD - Colon adenocarcinoma(6;0.00727)|READ - Rectum adenocarcinoma(6;0.0723)	UCEC - Uterine corpus endometrioid carcinoma (6;0.0974)|all cancers(6;2.54e-22)|Epithelial(6;4.21e-19)|OV - Ovarian serous cystadenocarcinoma(6;1.16e-09)|BRCA - Breast invasive adenocarcinoma(6;7.72e-05)|Lung(8;0.000189)|LUSC - Lung squamous cell carcinoma(6;0.00379)|GBM - Glioblastoma multiforme(6;0.00391)|Kidney(17;0.0773)|LUAD - Lung adenocarcinoma(8;0.247)		ccaccaccaccatcaccaccatc	0.567													2	4	---	---	---	---