Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID BCL9L 283149 hgsc.bcm.edu 36 11 118277095 118277095 + Missense_Mutation SNP T T A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 T T . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba DDHD1 80821 hgsc.bcm.edu 36 14 52594974 52594975 + Frame_Shift_Del DEL GT GT - novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 GT GT . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba MYH2 4620 hgsc.bcm.edu 36 17 10375771 10375771 + Silent SNP G G A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba NKAPL 222698 hgsc.bcm.edu 36 6 28336131 28336131 + Missense_Mutation SNP G G A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba OR10H2 26538 hgsc.bcm.edu 36 19 15700078 15700078 + Silent SNP G G A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba OR2B11 127623 hgsc.bcm.edu 36 1 245681884 245681884 + Frame_Shift_Del DEL G G - novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba BMP5 653 hgsc.bcm.edu 36 6 55847362 55847362 + Silent SNP G G T novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 G G G T G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba CATSPER1 117144 hgsc.bcm.edu 36 11 65544913 65544913 + Silent SNP G G A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba CCL7 6354 hgsc.bcm.edu 36 17 29622313 29622313 + Missense_Mutation SNP T T A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 T T T A T T Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba FASTKD1 79675 hgsc.bcm.edu 36 2 170102782 170102782 + Missense_Mutation SNP T T G novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 T T T G T T Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba HCN4 10021 hgsc.bcm.edu 36 15 71404530 71404530 + Silent SNP C C T novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba LPAR3 23566 hgsc.bcm.edu 36 1 85052402 85052402 + Silent SNP C C T novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba MAS1L 116511 hgsc.bcm.edu 36 6 29563331 29563331 + Missense_Mutation SNP C C A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba MRPS22 56945 hgsc.bcm.edu 36 3 140552585 140552585 + Missense_Mutation SNP A A G novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 A A A G A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba ACAT2 39 hgsc.bcm.edu 36 6 160103950 160103950 + Missense_Mutation SNP A A G novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 A A A G A A Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba AP1B1 162 hgsc.bcm.edu 36 22 28067638 28067638 + Missense_Mutation SNP C C T novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba CREBBP 1387 hgsc.bcm.edu 36 16 3730513 3730513 + Nonsense_Mutation SNP G G A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba CYLC1 1538 hgsc.bcm.edu 36 X 83015076 83015076 + Nonsense_Mutation SNP C C A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba GPR176 11245 hgsc.bcm.edu 36 15 37880665 37880665 + Missense_Mutation SNP C C A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba MCM3AP 8888 hgsc.bcm.edu 36 21 46479757 46479757 + Missense_Mutation SNP C C T novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba NHS 4810 hgsc.bcm.edu 36 X 17660270 17660270 + Missense_Mutation SNP C C T novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba OPTN 10133 hgsc.bcm.edu 36 10 13206088 13206088 + Missense_Mutation SNP G G C novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 G G G C G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba PKHD1 5314 hgsc.bcm.edu 36 6 51840795 51840795 + Missense_Mutation SNP G G A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba SLC12A3 6559 hgsc.bcm.edu 36 16 55483539 55483539 + Missense_Mutation SNP C C A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba SLC30A8 169026 hgsc.bcm.edu 36 8 118239252 118239252 + Missense_Mutation SNP C C T novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba TP53 7157 hgsc.bcm.edu 36 17 7520036 7520036 + Splice_Site SNP C C A novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba ZFYVE9 9372 hgsc.bcm.edu 36 1 52571104 52571104 + Missense_Mutation SNP A A T novel TCGA-25-1631-01A-01W-0615-10 TCGA-25-1631-10A-01W-0615-10 A A A T A A Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6226bdc6-5ffd-4c29-95fc-f29331d38a58 9f7b1d63-723c-413e-b205-50d718f9b7ba