Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID BMPR1B 658 hgsc.bcm.edu 36 4 96244728 96244728 + Missense_Mutation SNP A A T novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 A A . . . . Unknown Untested Somatic Phase_III WXS none SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 C14orf115 55237 hgsc.bcm.edu 36 14 73894215 73894216 + Frame_Shift_Ins INS - - G novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 - - . . . . Unknown Untested Somatic Phase_III WXS none SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 LRSAM1 90678 hgsc.bcm.edu 36 9 129269902 129269902 + Silent SNP T T G novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 T T . . . . Unknown Untested Somatic Phase_III WXS none SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 MMEL1 79258 hgsc.bcm.edu 36 1 2517896 2517896 + Silent SNP G G A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 ATP13A5 344905 hgsc.bcm.edu 36 3 194535424 194535424 + Missense_Mutation SNP C C T novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 C17orf71 55181 hgsc.bcm.edu 36 17 54645299 54645299 + Missense_Mutation SNP A A C novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 A A A C A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 CAMKK1 84254 hgsc.bcm.edu 36 17 3734453 3734453 + Silent SNP G G A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 DSEL 92126 hgsc.bcm.edu 36 18 63332454 63332454 + Silent SNP A A G novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 A A A G A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 GRB2 2885 hgsc.bcm.edu 36 17 70901278 70901278 + Missense_Mutation SNP G G T novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G G T G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 GRIN2C 2905 hgsc.bcm.edu 36 17 70357608 70357608 + Silent SNP G G A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 GRM1 2911 hgsc.bcm.edu 36 6 146392817 146392817 + Silent SNP G G A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 MTHFD1 4522 hgsc.bcm.edu 36 14 63956328 63956328 + Missense_Mutation SNP A A G novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 A A A G A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 NCAN 1463 hgsc.bcm.edu 36 19 19195995 19195995 + Missense_Mutation SNP G G A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 RAB37 326624 hgsc.bcm.edu 36 17 70248526 70248526 + Missense_Mutation SNP G G A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 SYDE1 85360 hgsc.bcm.edu 36 19 15083225 15083225 + Silent SNP G G A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 TUBA4A 7277 hgsc.bcm.edu 36 2 219824183 219824183 + Missense_Mutation SNP T T C novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 T T T C T T Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 WDR7 23335 hgsc.bcm.edu 36 18 52754083 52754083 + Silent SNP G G A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 ARID2 196528 hgsc.bcm.edu 36 12 44530469 44530469 + Missense_Mutation SNP C C T novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 KLHDC5 57542 hgsc.bcm.edu 36 12 27835958 27835958 + Missense_Mutation SNP G G A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 NWD1 284434 hgsc.bcm.edu 36 19 16731240 16731240 + Splice_Site SNP G G A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 PKHD1 5314 hgsc.bcm.edu 36 6 51599828 51599828 + Missense_Mutation SNP T T C novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 T T T C T T Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 ROR1 4919 hgsc.bcm.edu 36 1 64380784 64380784 + Missense_Mutation SNP C C G novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 C C C G C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 SPOCK3 50859 hgsc.bcm.edu 36 4 167892745 167892745 + Nonsense_Mutation SNP C C A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57 TP53 7157 hgsc.bcm.edu 36 17 7520261 7520261 + Nonsense_Mutation SNP C C A novel TCGA-25-1628-01A-01W-0615-10 TCGA-25-1628-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 4862eda8-08f7-4e6a-9d73-bc4c021b9264 ea72c8ee-64de-401a-9ea2-98a8a9136d57