Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID CACNA1S 779 hgsc.bcm.edu 36 1 199319053 199319053 + Frame_Shift_Del DEL T T - novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 GDF3 9573 hgsc.bcm.edu 36 12 7739486 7739486 + Frame_Shift_Del DEL C C - novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 H2AFY 9555 hgsc.bcm.edu 36 5 134706992 134706992 + Silent SNP G G T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 HKDC1 80201 hgsc.bcm.edu 36 10 70662831 70662831 + Missense_Mutation SNP A A C novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 KCNIP3 30818 hgsc.bcm.edu 36 2 95403774 95403774 + Frame_Shift_Del DEL G G - novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 NR2F1 7025 hgsc.bcm.edu 36 5 92946865 92946865 + Missense_Mutation SNP A A G novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 PION 54103 hgsc.bcm.edu 36 7 76842310 76842310 + Splice_Site SNP C C T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 RENBP 5973 hgsc.bcm.edu 36 X 152860231 152860231 + Missense_Mutation SNP G G T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 RNF146 81847 hgsc.bcm.edu 36 6 127650166 127650166 + Missense_Mutation SNP G G A novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 SLC1A6 6511 hgsc.bcm.edu 36 19 14940174 14940174 + Silent SNP C C T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 SPAG5 10615 hgsc.bcm.edu 36 17 23942909 23942909 + Missense_Mutation SNP G G T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 TBCD 6904 hgsc.bcm.edu 36 17 78457104 78457104 + Missense_Mutation SNP T T C novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 TSPYL1 7259 hgsc.bcm.edu 36 6 116707158 116707159 + In_Frame_Ins INS - - CAC novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 ZNF804A 91752 hgsc.bcm.edu 36 2 185510456 185510456 + Missense_Mutation SNP C C A novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 ARMC4 55130 hgsc.bcm.edu 36 10 28323962 28323962 + Missense_Mutation SNP T T G novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 T T T G T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 B3GAT2 135152 hgsc.bcm.edu 36 6 71660655 71660655 + Silent SNP C C G novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C C G C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 C11orf87 399947 hgsc.bcm.edu 36 11 108799745 108799745 + Missense_Mutation SNP C C A novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C C A C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 EFEMP1 2202 hgsc.bcm.edu 36 2 55951730 55951730 + Missense_Mutation SNP G G A novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 EPHA3 2042 hgsc.bcm.edu 36 3 89342107 89342107 + Silent SNP T T G novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 T T T G T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 KCNIP3 30818 hgsc.bcm.edu 36 2 95403838 95403838 + Silent SNP G G A novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 PHF20L1 51105 hgsc.bcm.edu 36 8 133876184 133876184 + Silent SNP T T C novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 T T T C T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 PPT1 5538 hgsc.bcm.edu 36 1 40318657 40318657 + Missense_Mutation SNP C T T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C T T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 PXDNL 137902 hgsc.bcm.edu 36 8 52395062 52395062 + Missense_Mutation SNP G G T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G G T G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 TEX2 55852 hgsc.bcm.edu 36 17 59619296 59619296 + Silent SNP C C G novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C C G C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 TP53 7157 hgsc.bcm.edu 36 17 7519186 7519186 + Missense_Mutation SNP C C A novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C A A C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 TTC24 164118 hgsc.bcm.edu 36 1 154822140 154822140 + Missense_Mutation SNP C C T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 ZFHX4 79776 hgsc.bcm.edu 36 8 77929002 77929002 + Silent SNP A A G novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 A A A G A A Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 C4BPA 722 hgsc.bcm.edu 36 1 205364250 205364250 + Missense_Mutation SNP T T C novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 T T T C T T Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 TTN 7273 hgsc.bcm.edu 36 2 179188626 179188626 + Missense_Mutation SNP C T T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C T T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 ARHGEF9 23229 hgsc.bcm.edu 36 X 62842964 62842964 + Missense_Mutation SNP C C A novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 DCC 1630 hgsc.bcm.edu 36 18 48959483 48959483 + Missense_Mutation SNP G G C novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G G C G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 ERCC5 2073 hgsc.bcm.edu 36 13 102322697 102322697 + Missense_Mutation SNP G G T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G T T G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 HUWE1 10075 hgsc.bcm.edu 36 X 53618861 53618861 + Missense_Mutation SNP A A G novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 A A A G A A Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 IL7R 3575 hgsc.bcm.edu 36 5 35912067 35912067 + Missense_Mutation SNP A A T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 A A A T A A Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 OR5M1 390168 hgsc.bcm.edu 36 11 56137239 56137239 + Missense_Mutation SNP C C T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 SIN3B 23309 hgsc.bcm.edu 36 19 16834182 16834182 + Missense_Mutation SNP G G T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G G T G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 DBC1 1620 hgsc.bcm.edu 36 9 120970127 120970127 + Missense_Mutation SNP C C T novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 MLL 4297 hgsc.bcm.edu 36 11 117882474 117882474 + Missense_Mutation SNP G G C novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 G G G C G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9 MTCP1 4515 hgsc.bcm.edu 36 X 153947128 153947128 + Missense_Mutation SNP T T C novel TCGA-24-1614-01A-01W-0552-10 TCGA-24-1614-10A-01W-0552-10 T T T C T T Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 8dd4d425-d03b-4167-9212-314bb38fe8ae 48ba40f3-6741-40c1-8756-da1a6b218ff9