Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID PEAR1 375033 broad.mit.edu 36 1 155141269 155141269 + Splice_Site SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 CHML 1122 broad.mit.edu 36 1 239864885 239864885 + Silent SNP C C A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 KIAA1462 57608 broad.mit.edu 36 10 30376650 30376650 + Missense_Mutation SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 CTR9 9646 broad.mit.edu 36 11 10756974 10756974 + Missense_Mutation SNP C C T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 GRIA4 2893 broad.mit.edu 36 11 105274336 105274336 + Silent SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 ANPEP 290 broad.mit.edu 36 15 88150536 88150536 + Missense_Mutation SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 OR3A2 4995 broad.mit.edu 36 17 3128274 3128274 + Nonsense_Mutation SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 MYH4 4622 broad.mit.edu 36 17 10292436 10292436 + Splice_Site SNP A A T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 KRT12 3859 broad.mit.edu 36 17 36276897 36276897 + Missense_Mutation SNP G G C novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 CYP4F3 4051 broad.mit.edu 36 19 15617582 15617582 + Silent SNP C C T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 CD207 50489 broad.mit.edu 36 2 70916385 70916385 + Silent SNP C C T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 NRP2 8828 broad.mit.edu 36 2 206300889 206300889 + Silent SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 SIGLEC1 6614 broad.mit.edu 36 20 3622892 3622892 + Missense_Mutation SNP C C T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 PLCB1 23236 broad.mit.edu 36 20 8717132 8717132 + Missense_Mutation SNP C C A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 STK4 6789 broad.mit.edu 36 20 43137155 43137155 + Missense_Mutation SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 PTPRG 5793 broad.mit.edu 36 3 62164618 62164618 + Silent SNP C C T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 CCRN4L 25819 broad.mit.edu 36 4 140183830 140183830 + Silent SNP A A C novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 FBXW7 55294 broad.mit.edu 36 4 153463655 153463655 + Nonsense_Mutation SNP A A T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 ODZ3 55714 broad.mit.edu 36 4 183951076 183951076 + Missense_Mutation SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 ISL1 3670 broad.mit.edu 36 5 50721518 50721518 + Missense_Mutation SNP A A G novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 PITX1 5307 broad.mit.edu 36 5 134392496 134392496 + Missense_Mutation SNP C C T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 GRIA1 2890 broad.mit.edu 36 5 153170810 153170810 + Silent SNP C C T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 LANCL2 55915 broad.mit.edu 36 7 55435292 55435292 + Splice_Site SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 BRAF 673 broad.mit.edu 36 7 140099662 140099662 + Missense_Mutation SNP T T C novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 SLC24A2 25769 broad.mit.edu 36 9 19506389 19506389 + Missense_Mutation SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 COL15A1 1306 broad.mit.edu 36 9 100803013 100803013 + Missense_Mutation SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 EPB41L4B 54566 broad.mit.edu 36 9 111019214 111019214 + Missense_Mutation SNP G G A novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 KCND1 3750 broad.mit.edu 36 X 48704872 48704872 + Missense_Mutation SNP C C T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 BEX1 55859 broad.mit.edu 36 X 102204510 102204510 + Missense_Mutation SNP G G C novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 GRIA2 2891 broad.mit.edu 36 4 158477126 158477132 + Frame_Shift_Del DEL CCTTTAG - CCTTTAG novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 CCTTTAG CCTTTAG - - CCTTTAG CCTTTAG Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5 PRKDC 5591 broad.mit.edu 36 8 48930434 48930434 + Frame_Shift_Del DEL T - T novel none TCGA-24-1565-01A-01W-0551-08 TCGA-24-1565-10A-01W-0551-08 T T - - T T Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx e411496c-ce15-48c7-bd51-cb4bd6d34d65 65cd679f-5442-4a1b-ad0c-a2bd142fa3e5