Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID DCHS2 54798 hgsc.bcm.edu 36 4 155525030 155525030 + Missense_Mutation SNP G G A novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 JUP 3728 hgsc.bcm.edu 36 17 37173014 37173014 + Missense_Mutation SNP A A T novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 KCNH8 131096 hgsc.bcm.edu 36 3 19529731 19529732 + Frame_Shift_Ins INS - - C novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 MYO3A 53904 hgsc.bcm.edu 36 10 26425327 26425327 + Missense_Mutation SNP A A G novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 NUP160 23279 hgsc.bcm.edu 36 11 47771032 47771032 + Missense_Mutation SNP T T G novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 OXCT1 5019 hgsc.bcm.edu 36 5 41798052 41798052 + Missense_Mutation SNP A A T novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 PKHD1L1 93035 hgsc.bcm.edu 36 8 110529723 110529723 + Frame_Shift_Del DEL G G - novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 SELP 6403 hgsc.bcm.edu 36 1 167849547 167849548 + Frame_Shift_Del DEL GG GG - novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 GG GG . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 SEMA4G 57715 hgsc.bcm.edu 36 10 102733097 102733097 + Missense_Mutation SNP A A T novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 TRIP13 9319 hgsc.bcm.edu 36 5 967604 967604 + Nonsense_Mutation SNP C C T novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 UBP1 7342 hgsc.bcm.edu 36 3 33425224 33425224 + Missense_Mutation SNP G G A novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 ADAMTS16 170690 hgsc.bcm.edu 36 5 5292978 5292978 + Silent SNP C C G novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 C C C G C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 BACE2 25825 hgsc.bcm.edu 36 21 41544648 41544648 + Missense_Mutation SNP C C G novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 C C C G C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 CCDC39 339829 hgsc.bcm.edu 36 3 181859971 181859971 + Missense_Mutation SNP A A G novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 A A A G A A Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 DOCK2 1794 hgsc.bcm.edu 36 5 169416336 169416336 + Missense_Mutation SNP G G C novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 GABRG1 2565 hgsc.bcm.edu 36 4 45738000 45738000 + Missense_Mutation SNP G G A novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 GLRA3 8001 hgsc.bcm.edu 36 4 175834847 175834847 + Missense_Mutation SNP G G A novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 GRIA3 2892 hgsc.bcm.edu 36 X 122389591 122389591 + Missense_Mutation SNP G G A novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 KIAA1797 54914 hgsc.bcm.edu 36 9 20897201 20897201 + Missense_Mutation SNP G G T novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G T G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 MAPK1 5594 hgsc.bcm.edu 36 22 20490202 20490202 + Silent SNP A A T novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 A A A T A A Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 NAT8B 51471 hgsc.bcm.edu 36 2 73781752 73781752 + Silent SNP G G A novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 OR4C11 219429 hgsc.bcm.edu 36 11 55128035 55128035 + Missense_Mutation SNP G G C novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 SLC17A1 6568 hgsc.bcm.edu 36 6 25927345 25927345 + Silent SNP G G C novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 FANCM 57697 hgsc.bcm.edu 36 14 44714795 44714795 + Nonsense_Mutation SNP C C T novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 CHD6 84181 hgsc.bcm.edu 36 20 39514845 39514845 + Missense_Mutation SNP C C T novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 FBLN5 10516 hgsc.bcm.edu 36 14 91413697 91413697 + Missense_Mutation SNP C C G novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 C C C G C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 MLL 4297 hgsc.bcm.edu 36 11 117848588 117848588 + Nonsense_Mutation SNP G G T novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G T G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 NLRP8 126205 hgsc.bcm.edu 36 19 61182580 61182580 + Missense_Mutation SNP A A T novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 A A A T A A Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 PEX5L 51555 hgsc.bcm.edu 36 3 181074906 181074906 + Splice_Site SNP C C G novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 C C C G C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 PTPRT 11122 hgsc.bcm.edu 36 20 40842323 40842323 + Missense_Mutation SNP G G A novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 TOX4 9878 hgsc.bcm.edu 36 14 21031164 21031164 + Missense_Mutation SNP G G C novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G C G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 TP53 7157 hgsc.bcm.edu 36 17 7518915 7518915 + Missense_Mutation SNP T T C novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 T T T C T T Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091 USH2A 7399 hgsc.bcm.edu 36 1 214662006 214662006 + Missense_Mutation SNP G G A novel TCGA-24-1553-01A-01W-0552-10 TCGA-24-1553-10A-01W-0552-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 478be597-c119-482c-9bee-b8558ee02e09 7c5f9a5d-59ec-4bee-a048-abf723b3e091