Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID IGHMBP2 3508 hgsc.bcm.edu 36 11 68460338 68460338 + Frame_Shift_Del DEL G G - novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd LRP5 4041 hgsc.bcm.edu 36 11 67872115 67872115 + Missense_Mutation SNP G G A novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd MYST4 23522 hgsc.bcm.edu 36 10 76451914 76451914 + Silent SNP A A G novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 A A . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd PIKFYVE 200576 hgsc.bcm.edu 36 2 208909061 208909061 + Missense_Mutation SNP G G A novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd VAV1 7409 hgsc.bcm.edu 36 19 6783147 6783147 + Missense_Mutation SNP T T C novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 T T . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd WDR70 55100 hgsc.bcm.edu 36 5 37738825 37738825 + Missense_Mutation SNP G G C novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd ZNF432 9668 hgsc.bcm.edu 36 19 57235607 57235607 + Nonsense_Mutation SNP G G A novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd B3GAT1 27087 hgsc.bcm.edu 36 11 133762733 133762733 + Missense_Mutation SNP C C T novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd COL11A2 1302 hgsc.bcm.edu 36 6 33240616 33240616 + Silent SNP G G A novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd KIF2B 84643 hgsc.bcm.edu 36 17 49255721 49255721 + Missense_Mutation SNP C C T novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd MRPL9 65005 hgsc.bcm.edu 36 1 150000577 150000577 + Missense_Mutation SNP T T C novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 T T T C T T Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd SLCO1C1 53919 hgsc.bcm.edu 36 12 20767338 20767338 + Missense_Mutation SNP C C A novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd TBX5 6910 hgsc.bcm.edu 36 12 113317074 113317074 + Missense_Mutation SNP A A T novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 A A A T A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd TET1 80312 hgsc.bcm.edu 36 10 70096859 70096859 + Missense_Mutation SNP C C T novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd TRIM68 55128 hgsc.bcm.edu 36 11 4578596 4578596 + Missense_Mutation SNP C C T novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd XYLT1 64131 hgsc.bcm.edu 36 16 17135852 17135852 + Missense_Mutation SNP G G A novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd ZNF132 7691 hgsc.bcm.edu 36 19 63637215 63637215 + Missense_Mutation SNP G G C novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G G C G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd LRP1B 53353 hgsc.bcm.edu 36 2 141176508 141176508 + Missense_Mutation SNP G G C novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G G C G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd TP53 7157 hgsc.bcm.edu 36 17 7518284 7518284 + Missense_Mutation SNP G G T novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G G T G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd VSIG2 23584 hgsc.bcm.edu 36 11 124123821 124123821 + Missense_Mutation SNP G G A novel TCGA-24-1545-01A-01W-0615-10 TCGA-24-1545-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 6fcbf641-1923-47c7-a4fb-6a9ca419569b 0df6fb20-969f-4101-894d-52433d0733fd