Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context ZNF426 79088 genome.wustl.edu 36 19 9502741 9502741 + Missense_Mutation SNP A A G novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 9502741 9502741 ZNF426 19 A A G 8 ZNF812 729648 genome.wustl.edu 36 19 9665486 9665486 + Missense_Mutation SNP G G A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 9665486 9665486 ZNF812 19 G G A 40 HDAC11 79885 genome.wustl.edu 36 3 13520660 13520660 + Nonsense_Mutation SNP A A T novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 13520660 13520660 HDAC11 3 A A T 11 FGD5 152273 genome.wustl.edu 36 3 14836828 14836828 + Missense_Mutation SNP G G A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 14836828 14836828 FGD5 3 G G A 40 CCT8L2 150160 genome.wustl.edu 36 22 15452821 15452821 + Missense_Mutation SNP G G A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 15452821 15452821 CCT8L2 22 G G A 38 CD19 930 genome.wustl.edu 36 16 28851244 28851244 + Missense_Mutation SNP G G T novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 28851244 28851244 CD19 16 G G T 36 CHMP4B 128866 genome.wustl.edu 36 20 31899954 31899954 + Missense_Mutation SNP C C A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 31899954 31899954 CHMP4B 20 C C A 27 ANKRD18B 441459 genome.wustl.edu 36 9 33566858 33566858 + Silent SNP G A A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G A A A A Unknown Valid Germline 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 33566858 33566858 ANKRD18B 9 G A A 42 PRRG1 5638 genome.wustl.edu 36 X 37170088 37170088 + Missense_Mutation SNP A A G novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 37170088 37170088 PRRG1 23 A A G 3 CAP1 10487 genome.wustl.edu 36 1 40302763 40302763 + Missense_Mutation SNP A A G novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 40302763 40302763 CAP1 1 A A G 4 LRFN1 57622 genome.wustl.edu 36 19 44496453 44496453 + Missense_Mutation SNP T T C novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 44496453 44496453 LRFN1 19 T T C 55 MAP4 4134 genome.wustl.edu 36 3 47994421 47994421 + Missense_Mutation SNP G G A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 47994421 47994421 MAP4 3 G G A 47 KRT73 319101 genome.wustl.edu 36 12 51293740 51293740 + Missense_Mutation SNP T T G novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 51293740 51293740 KRT73 12 T T G 56 USP34 9736 genome.wustl.edu 36 2 61329262 61329262 + Silent SNP A A G novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 61329262 61329262 USP34 2 A A G 16 AURKC 6795 genome.wustl.edu 36 19 62436712 62436712 + Missense_Mutation SNP G G C novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 62436712 62436712 AURKC 19 G G C 33 CCDC88B 283234 genome.wustl.edu 36 11 63876809 63876809 + Missense_Mutation SNP C C T novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 63876809 63876809 CCDC88B 11 C C T 26 CLEC4F 165530 genome.wustl.edu 36 2 70897329 70897329 + Missense_Mutation SNP G G C novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 70897329 70897329 CLEC4F 2 G G C 42 DNAH17 8632 genome.wustl.edu 36 17 73934775 73934775 + Missense_Mutation SNP C C T novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 73934775 73934775 DNAH17 17 C C T 19 RPS6KL1 83694 genome.wustl.edu 36 14 74443539 74443539 + Silent SNP T T C novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 74443539 74443539 RPS6KL1 14 T T C 56 RNF213 57674 genome.wustl.edu 36 17 75978453 75978453 + Missense_Mutation SNP C C T novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 75978453 75978453 RNF213 17 C C T 23 EFTUD1 79631 genome.wustl.edu 36 15 80338515 80338515 + Missense_Mutation SNP T T C novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 80338515 80338515 EFTUD1 15 T T C 52 GBP7 388646 genome.wustl.edu 36 1 89410183 89410183 + Silent SNP T T A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 89410183 89410183 GBP7 1 T T A 55 PCDH19 57526 genome.wustl.edu 36 X 99438459 99438459 + Silent SNP G G A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 99438459 99438459 PCDH19 23 G G A 43 BCAP29 55973 genome.wustl.edu 36 7 107008501 107008501 + Silent SNP A A T novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 107008501 107008501 BCAP29 7 A A T 15 COL4A6 1288 genome.wustl.edu 36 X 107349615 107349615 + Missense_Mutation SNP A A T novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 107349615 107349615 COL4A6 23 A A T 2 ATM 472 genome.wustl.edu 36 11 107707384 107707384 + Missense_Mutation SNP G G A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 107707384 107707384 ATM 11 G G A 33 COL4A5 1287 genome.wustl.edu 36 X 107817466 107817466 + Missense_Mutation SNP C C T novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 107817466 107817466 COL4A5 23 C C T 19 PHLDB2 90102 genome.wustl.edu 36 3 113155498 113155498 + Missense_Mutation SNP G G A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 113155498 113155498 PHLDB2 3 G G A 48 ENSG00000196703 genome.wustl.edu 36 11 123591505 123591505 + Nonsense_Mutation SNP T T G novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 123591505 123591505 ENSG00000196703 11 T T G 49 LOC653781 653781 genome.wustl.edu 36 2 131130802 131130802 + Missense_Mutation SNP G G T novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 131130802 131130802 LOC653781 2 G G T 45 PCDHA11 56138 genome.wustl.edu 36 5 140230045 140230045 + Missense_Mutation SNP C C G novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 140230045 140230045 PCDHA11 5 C C G 19 OR2A5 393046 genome.wustl.edu 36 7 143378730 143378730 + Silent SNP C C A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 143378730 143378730 OR2A5 7 C C A 24 ANKRD35 148741 genome.wustl.edu 36 1 144272487 144272487 + Missense_Mutation SNP C C G novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 144272487 144272487 ANKRD35 1 C C G 24 NSD1 64324 genome.wustl.edu 36 5 176619656 176619656 + Missense_Mutation SNP C C A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 176619656 176619656 NSD1 5 C C A 28 ZNF454 285676 genome.wustl.edu 36 5 178324574 178324574 + Missense_Mutation SNP C C G novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 178324574 178324574 ZNF454 5 C C G 32 TTN 7273 genome.wustl.edu 36 2 179103710 179103710 + Nonsense_Mutation SNP T T A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 179103710 179103710 TTN 2 T T A 64 SLC45A3 85414 genome.wustl.edu 36 1 203898616 203898616 + Missense_Mutation SNP G G A novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 203898616 203898616 SLC45A3 1 G G A 39 TP53 7157 genome.wustl.edu 36 17 7519156 7519158 + Indel Indel --- --- TT novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 - - - T - - Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Indel Indel 7519156 7519158 TP53 17 --- --- TT 48 ENSG00000202582 genome.wustl.edu 36 12 48558661 48558661 + Missense_Mutation SNP T C T novel Unknown TCGA-24-0980-01 TCGA-24-0980-10 T T C T T T Unknown Valid Somatic Phase_III Capture 454_PCR_WGA dbGAP Illumina GAIIx WashU Missense_Mutation SNP 48558661 48558661 ENSG00000202582 12 T C T 57 GPX6 257202 genome.wustl.edu 36 6 28580113 28580113 + Missense_Mutation SNP G G C Unknown TCGA-24-0980-01 TCGA-24-0980-10 G G G C G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 28580113 28580113 GPX6 6 G G C 47 LOC728220 728220 genome.wustl.edu 36 2 161846670 161846671 + Frame_Shift_Ins INS - - G Unknown TCGA-24-0980-01 TCGA-24-0980-10 - - - G - - Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Frame_Shift_Ins INS 161846670 161846671 LOC728220 2 - - G 54