Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context IRF4 3662 genome.wustl.edu 36 6 350067 350067 + Silent SNP G A A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G A A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 350067 350067 IRF4 6 G A A 45 FAM113A 64773 genome.wustl.edu 36 20 2767116 2767116 + Silent SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 2767116 2767116 FAM113A 20 G G A 43 TP53 7157 genome.wustl.edu 36 17 7519179 7519179 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 7519179 7519179 TP53 17 G G A 42 SLC2A3 6515 genome.wustl.edu 36 12 7977757 7977757 + Silent SNP T T C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 7977757 7977757 SLC2A3 12 T T C 55 PKN1 5585 genome.wustl.edu 36 19 14441797 14441797 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 14441797 14441797 PKN1 19 G G A 41 NMT2 9397 genome.wustl.edu 36 10 15201474 15201474 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 15201474 15201474 NMT2 10 G G C 45 MACROD2 140733 genome.wustl.edu 36 20 15791439 15791439 + Missense_Mutation SNP A A C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 15791439 15791439 MACROD2 20 A A C 14 MYO9B 4650 genome.wustl.edu 36 19 17144721 17144721 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 17144721 17144721 MYO9B 19 G G C 36 CLTCL1 8218 genome.wustl.edu 36 22 17555514 17555514 + Nonstop_Mutation SNP C A A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C A A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonstop_Mutation SNP 17555514 17555514 CLTCL1 22 C A A 29 MTUS1 57509 genome.wustl.edu 36 8 17656868 17656868 + Silent SNP G A A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G A A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 17656868 17656868 MTUS1 8 G A A 48 OR11H12 440153 genome.wustl.edu 36 14 18447700 18447700 + Nonsense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 18447700 18447700 OR11H12 14 G G A 47 GMIP 51291 genome.wustl.edu 36 19 19606667 19606667 + Silent SNP C C T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 19606667 19606667 GMIP 19 C C T 19 LAMA3 3909 genome.wustl.edu 36 18 19741770 19741770 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 19741770 19741770 LAMA3 18 C C A 19 IGLV3-12 genome.wustl.edu 36 22 21444931 21444931 + Missense_Mutation SNP G A A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G A A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 21444931 21444931 IGLV3-12 22 G A A 34 MYO18A 399687 genome.wustl.edu 36 17 24472330 24472330 + Missense_Mutation SNP C T T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C T T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 24472330 24472330 MYO18A 17 C T T 23 ARHGAP21 57584 genome.wustl.edu 36 10 24914568 24914568 + Silent SNP C C T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 24914568 24914568 ARHGAP21 10 C C T 19 LRRC37B 114659 genome.wustl.edu 36 17 27400349 27400349 + Silent SNP A A G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 27400349 27400349 LRRC37B 17 A A G 6 HIST1H4L 8368 genome.wustl.edu 36 6 27949195 27949195 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 27949195 27949195 HIST1H4L 6 C C T 31 FOSL2 2355 genome.wustl.edu 36 2 28485223 28485223 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 28485223 28485223 FOSL2 2 G G A 33 NOL4 8715 genome.wustl.edu 36 18 30057084 30057084 + Missense_Mutation SNP C A A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C A A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 30057084 30057084 NOL4 18 C A A 20 LHX1 3975 genome.wustl.edu 36 17 32371784 32371784 + Silent SNP C T T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 32371784 32371784 LHX1 17 C T T 18 KCNE1 3753 genome.wustl.edu 36 21 34743419 34743419 + Silent SNP G G T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 34743419 34743419 KCNE1 21 G G T 43 CYTH4 27128 genome.wustl.edu 36 22 36025279 36025279 + Silent SNP C T T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C T T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 36025279 36025279 CYTH4 22 C T T 31 STK38 11329 genome.wustl.edu 36 6 36574199 36574199 + Missense_Mutation SNP T T G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 36574199 36574199 STK38 6 T T G 56 CLIP3 25999 genome.wustl.edu 36 19 41200644 41200644 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 41200644 41200644 CLIP3 19 C C T 27 BMS1 9790 genome.wustl.edu 36 10 42609420 42609420 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 42609420 42609420 BMS1 10 G G T 47 HYI 81888 genome.wustl.edu 36 1 43690208 43690208 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 43690208 43690208 HYI 1 C C T 30 RYR1 6261 genome.wustl.edu 36 19 43767482 43767482 + Silent SNP C T T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C T T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 43767482 43767482 RYR1 19 C T T 31 C21orf2 755 genome.wustl.edu 36 21 44576270 44576270 + Silent SNP C C T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C T C T Unknown Valid Germline 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 44576270 44576270 C21orf2 21 C C T 23 HTR2A 3356 genome.wustl.edu 36 13 46307197 46307197 + Missense_Mutation SNP G C C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G C C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 46307197 46307197 HTR2A 13 G C C 45 SLC9A7 84679 genome.wustl.edu 36 X 46406502 46406502 + Missense_Mutation SNP T T G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 46406502 46406502 SLC9A7 23 T T G 59 FAIM2 23017 genome.wustl.edu 36 12 48569235 48569235 + Silent SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 48569235 48569235 FAIM2 12 G G A 42 SMARCD1 6602 genome.wustl.edu 36 12 48778839 48778839 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 48778839 48778839 SMARCD1 12 G G A 42 USP19 10869 genome.wustl.edu 36 3 49123457 49123457 + Missense_Mutation SNP C T T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C T T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 49123457 49123457 USP19 3 C T T 23 CLCN5 1184 genome.wustl.edu 36 X 49737438 49737438 + Missense_Mutation SNP T T A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 49737438 49737438 CLCN5 23 T T A 57 AGAP7 0 genome.wustl.edu 36 10 51134838 51134838 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 51134838 51134838 AGAP7 10 G G A 40 DHX34 9704 genome.wustl.edu 36 19 52553216 52553216 + Splice_Site_SNP SNP G G C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 52553216 52553216 DHX34 19 G G C 44 TRPM4 54795 genome.wustl.edu 36 19 54384063 54384063 + Missense_Mutation SNP T T C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 54384063 54384063 TRPM4 19 T T C 54 DGKA 1606 genome.wustl.edu 36 12 54620413 54620413 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 54620413 54620413 DGKA 12 G G T 37 OR8U1 219417 genome.wustl.edu 36 11 55899806 55899806 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 55899806 55899806 OR8U1 11 G G A 44 ZNF479 90827 genome.wustl.edu 36 7 57192030 57192030 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 57192030 57192030 ZNF479 7 C C G 32 CCDC45 90799 genome.wustl.edu 36 17 59953772 59953772 + Missense_Mutation SNP G C C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G C C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 59953772 59953772 CCDC45 17 G C C 41 NLRP13 126204 genome.wustl.edu 36 19 61114937 61114937 + Silent SNP C T T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C T T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 61114937 61114937 NLRP13 19 C T T 28 CDH7 1005 genome.wustl.edu 36 18 61698977 61698977 + Missense_Mutation SNP C T T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C T T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 61698977 61698977 CDH7 18 C T T 28 SLC22A8 9376 genome.wustl.edu 36 11 62523831 62523831 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 62523831 62523831 SLC22A8 11 C C G 18 SIPA1L1 26037 genome.wustl.edu 36 14 71125433 71125433 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 71125433 71125433 SIPA1L1 14 C C G 30 DCK 1633 genome.wustl.edu 36 4 72106954 72106954 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 72106954 72106954 DCK 4 A A G 14 LOC338611 338611 genome.wustl.edu 36 10 72224212 72224212 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 72224212 72224212 LOC338611 10 C C T 17 ZCCHC6 79670 genome.wustl.edu 36 9 88127785 88127785 + Silent SNP G G T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 88127785 88127785 ZCCHC6 9 G G T 38 FAT3 120114 genome.wustl.edu 36 11 92207751 92207751 + Silent SNP C C A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 92207751 92207751 FAT3 11 C C A 21 TMEM67 91147 genome.wustl.edu 36 8 94837224 94837224 + Missense_Mutation SNP A G G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 A A G G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 94837224 94837224 TMEM67 8 A G G 4 DZIP1 22873 genome.wustl.edu 36 13 95075051 95075051 + Nonsense_Mutation SNP A A T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 95075051 95075051 DZIP1 13 A A T 13 LINS1 55180 genome.wustl.edu 36 15 98938528 98938528 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 98938528 98938528 LINS1 15 C C A 18 TSTD2 158427 genome.wustl.edu 36 9 99408281 99408281 + Missense_Mutation SNP G T T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G T T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 99408281 99408281 TSTD2 9 G T T 35 SENP7 57337 genome.wustl.edu 36 3 102563275 102563275 + Nonsense_Mutation SNP T T A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 102563275 102563275 SENP7 3 T T A 64 LAMB1 3912 genome.wustl.edu 36 7 107359937 107359937 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 107359937 107359937 LAMB1 7 G G A 46 IRS4 8471 genome.wustl.edu 36 X 107863869 107863869 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 107863869 107863869 IRS4 23 C C T 25 FAM184A 79632 genome.wustl.edu 36 6 119366432 119366432 + Missense_Mutation SNP C G G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C G G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 119366432 119366432 FAM184A 6 C G G 32 TMEM39A 55254 genome.wustl.edu 36 3 120663521 120663521 + Missense_Mutation SNP T T A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 120663521 120663521 TMEM39A 3 T T A 63 SORL1 6653 genome.wustl.edu 36 11 120926506 120926506 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 120926506 120926506 SORL1 11 A A G 14 SLC12A8 84561 genome.wustl.edu 36 3 126379494 126379494 + Silent SNP G G T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 126379494 126379494 SLC12A8 3 G G T 47 HSPA4L 22824 genome.wustl.edu 36 4 128934695 128934695 + Silent SNP T C C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 T T C C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 128934695 128934695 HSPA4L 4 T C C 52 ZNF449 203523 genome.wustl.edu 36 X 134321554 134321554 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 134321554 134321554 ZNF449 23 C C A 17 KEL 3792 genome.wustl.edu 36 7 142351551 142351551 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 142351551 142351551 KEL 7 G G A 42 RASA2 5922 genome.wustl.edu 36 3 142731291 142731291 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 142731291 142731291 RASA2 3 C C G 20 ABP1 26 genome.wustl.edu 36 7 150185135 150185135 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 150185135 150185135 ABP1 7 C C A 20 RIF1 55183 genome.wustl.edu 36 2 152028439 152028439 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 152028439 152028439 RIF1 2 A A G 9 RAG1AP1 55974 genome.wustl.edu 36 1 153377158 153377158 + Nonsense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 153377158 153377158 RAG1AP1 1 G G A 47 OR10J1 26476 genome.wustl.edu 36 1 157602839 157602839 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 157602839 157602839 OR10J1 1 A A G 11 LCP2 3937 genome.wustl.edu 36 5 169612768 169612768 + Missense_Mutation SNP G T T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G T T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 169612768 169612768 LCP2 5 G T T 42 ARL10 285598 genome.wustl.edu 36 5 175731417 175731417 + Missense_Mutation SNP G C C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G C C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 175731417 175731417 ARL10 5 G C C 47 ZFP2 80108 genome.wustl.edu 36 5 178291490 178291490 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 178291490 178291490 ZFP2 5 G G C 36 TTN 7273 genome.wustl.edu 36 2 179163234 179163234 + Nonstop_Mutation SNP C C A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonstop_Mutation SNP 179163234 179163234 TTN 2 C C A 29 STAT4 6775 genome.wustl.edu 36 2 191630994 191630994 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 191630994 191630994 STAT4 2 G G A 48 LRRC15 131578 genome.wustl.edu 36 3 195562775 195562775 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 195562775 195562775 LRRC15 3 C C T 31 ZDBF2 57683 genome.wustl.edu 36 2 206880159 206880159 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 206880159 206880159 ZDBF2 2 G G A 37 PIKFYVE 200576 genome.wustl.edu 36 2 208898536 208898536 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 208898536 208898536 PIKFYVE 2 C C A 24 USH2A 7399 genome.wustl.edu 36 1 214658565 214658565 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 214658565 214658565 USH2A 1 G G A 37 TUBA4B 80086 genome.wustl.edu 36 2 219844504 219844504 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 219844504 219844504 TUBA4B 2 G G A 48 UGT1A9 54600 genome.wustl.edu 36 2 234245851 234245851 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 234245851 234245851 UGT1A9 2 G G A 45 LOC392242 392242 genome.wustl.edu 36 8 86743395 86743396 + In_Frame_Ins INS - - TCAAAC novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 - - Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU In_Frame_Ins INS 86743395 86743396 LOC392242 8 - - TCAAAC 56 FAM129A 116496 genome.wustl.edu 36 1 183031338 183031339 + Missense DNP GG GG CT novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense DNP 183031338 183031339 FAM129A 1 GG GG CT 47 GATA3 2625 genome.wustl.edu 36 10 8140557 8140557 + Silent SNP G G A novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 8140557 8140557 GATA3 10 G G A 39 BRF1 2972 genome.wustl.edu 36 14 104755051 104755051 + Silent SNP G G T novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 104755051 104755051 BRF1 14 G G T 39 PHLPP2 23035 genome.wustl.edu 36 16 70294104 70294105 + Missense DNP TC AA AA novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 T T A A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense DNP 70294104 70294105 PHLPP2 16 TC AA AA 50 CXXC1 30827 genome.wustl.edu 36 18 46065702 46065702 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 46065702 46065702 CXXC1 18 G G C 41 RWDD1 51389 genome.wustl.edu 36 6 117020913 117020914 + Missense DNP CC AA AA novel Unknown TCGA-23-1021-01 TCGA-23-1021-10 C C A A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense DNP 117020913 117020914 RWDD1 6 CC AA AA 30 ASH1L 55870 genome.wustl.edu 36 1 153614790 153614792 + In_Frame_Del DEL TCA TCA - Unknown TCGA-23-1021-01 TCGA-23-1021-10 TCA TCA TCA - TCA TCA Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU In_Frame_Del DEL 153614790 153614792 ASH1L 1 TCA TCA - 17 COL4A4 1286 genome.wustl.edu 36 2 227667198 227667206 + In_Frame_Del DEL GGAAGCCCA GGAAGCCCA - Unknown TCGA-23-1021-01 TCGA-23-1021-10 GGAAGCCCA GGAAGCCCA GGAAGCCCA - GGAAGCCCA GGAAGCCCA Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU In_Frame_Del DEL 227667198 227667206 COL4A4 2 GGAAGCCCA GGAAGCCCA - 47