Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
OLFML1	283298	genome.wustl.edu	36	11	7487543	7487543	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7487543	7487543	OLFML1	11	C	C	G	22
TP53	7157	genome.wustl.edu	36	17	7518988	7518988	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	7518988	7518988	TP53	17	G	G	A	39
MYO1D	4642	genome.wustl.edu	36	17	28106699	28106699	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	28106699	28106699	MYO1D	17	C	C	A	26
DEPDC5	9681	genome.wustl.edu	36	22	30583446	30583446	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	30583446	30583446	DEPDC5	22	G	G	A	34
TNXB	7148	genome.wustl.edu	36	6	32143602	32143602	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	32143602	32143602	TNXB	6	C	C	A	22
CAPRIN1	4076	genome.wustl.edu	36	11	34054722	34054722	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	34054722	34054722	CAPRIN1	11	G	G	T	43
FSCB	84075	genome.wustl.edu	36	14	44043813	44043813	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	44043813	44043813	FSCB	14	C	C	G	32
AGAP4	119016	genome.wustl.edu	36	10	45641482	45641482	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	45641482	45641482	AGAP4	10	C	C	T	19
NIN	51199	genome.wustl.edu	36	14	50291090	50291090	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	50291090	50291090	NIN	14	C	C	T	30
EML2	24139	genome.wustl.edu	36	19	50808770	50808770	+	Splice_Site_SNP	SNP	C	C	T	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	50808770	50808770	EML2	19	C	C	T	24
ZCCHC11	23318	genome.wustl.edu	36	1	52713761	52713761	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	52713761	52713761	ZCCHC11	1	G	G	A	34
SCFD2	152579	genome.wustl.edu	36	4	53926373	53926373	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	53926373	53926373	SCFD2	4	G	G	A	41
GPR75	10936	genome.wustl.edu	36	2	53934071	53934071	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	53934071	53934071	GPR75	2	C	C	A	30
SIGLEC11	114132	genome.wustl.edu	36	19	55153785	55153785	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	55153785	55153785	SIGLEC11	19	G	G	A	40
OR8H3	390152	genome.wustl.edu	36	11	55646944	55646944	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	55646944	55646944	OR8H3	11	A	A	T	4
KIR2DL3	3804	genome.wustl.edu	36	19	59947246	59947246	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	59947246	59947246	KIR2DL3	19	G	G	A	43
SYNE2	23224	genome.wustl.edu	36	14	63527028	63527028	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	63527028	63527028	SYNE2	14	A	A	G	3
SF3B3	23450	genome.wustl.edu	36	16	69133129	69133129	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	69133129	69133129	SF3B3	16	C	C	T	29
GBP1	2633	genome.wustl.edu	36	1	89295139	89295139	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	89295139	89295139	GBP1	1	G	G	A	45
EPHA3	2042	genome.wustl.edu	36	3	89342190	89342190	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	89342190	89342190	EPHA3	3	C	C	T	19
AGL	178	genome.wustl.edu	36	1	100122272	100122272	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	100122272	100122272	AGL	1	G	G	A	45
CENPE	1062	genome.wustl.edu	36	4	104257209	104257209	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	104257209	104257209	CENPE	4	C	C	T	29
COL4A6	1288	genome.wustl.edu	36	X	107304483	107304483	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	107304483	107304483	COL4A6	23	G	G	T	35
KIAA1407	57577	genome.wustl.edu	36	3	115220328	115220328	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	115220328	115220328	KIAA1407	3	C	C	A	17
ACP6	51205	genome.wustl.edu	36	1	145593008	145593008	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	145593008	145593008	ACP6	1	C	C	A	29
GIMAP8	155038	genome.wustl.edu	36	7	149805162	149805162	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	149805162	149805162	GIMAP8	7	G	G	A	37
OR6N1	128372	genome.wustl.edu	36	1	157002280	157002280	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	157002280	157002280	OR6N1	1	C	C	A	26
ACP6	51205	genome.wustl.edu	36	1	145593003	145593004	+	Frame_Shift_Ins	INS	-	-	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	-	-	-	A	-	-	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	WashU	Frame_Shift_Ins	INS	145593003	145593004	ACP6	1	-	-	A	58
OLFM3	118427	genome.wustl.edu	36	1	102042416	102042416	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	102042416	102042416	OLFM3	1	A	A	C	3
PAX9	5083	genome.wustl.edu	36	14	36202291	36202291	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	36202291	36202291	PAX9	14	C	C	T	23
IRGQ	126298	genome.wustl.edu	36	19	48791007	48791007	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	48791007	48791007	IRGQ	19	G	G	A	43
LOC643194	643194	genome.wustl.edu	36	2	161846005	161846005	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	161846005	161846005	LOC643194	2	G	G	C	41
ZNF295	49854	genome.wustl.edu	36	21	42287270	42287271	+	Missense	DNP	CC	CC	AG	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	42287270	42287271	ZNF295	21	CC	CC	AG	30
IPPK	64768	genome.wustl.edu	36	9	94440330	94440330	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1405-01	TCGA-13-1405-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	94440330	94440330	IPPK	9	C	C	G	30