Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context CHL1 10752 genome.wustl.edu 36 3 418318 418318 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 418318 418318 CHL1 3 A A T 3 SDCBP2 27111 genome.wustl.edu 36 20 1249033 1249033 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 1249033 1249033 SDCBP2 20 C C G 30 SLC23A2 9962 genome.wustl.edu 36 20 4831179 4831179 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 4831179 4831179 SLC23A2 20 C C G 28 TP53 7157 genome.wustl.edu 36 17 7518960 7518960 + Missense_Mutation SNP T C C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 T T C C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 7518960 7518960 TP53 17 T C C 49 STK33 65975 genome.wustl.edu 36 11 8370708 8370708 + Silent SNP C C T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 8370708 8370708 STK33 11 C C T 29 DOCK6 57572 genome.wustl.edu 36 19 11172437 11172437 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 11172437 11172437 DOCK6 19 C C T 23 DNAH9 1770 genome.wustl.edu 36 17 11749704 11749704 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 11749704 11749704 DNAH9 17 G G T 33 LIPI 149998 genome.wustl.edu 36 21 14457677 14457677 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 14457677 14457677 LIPI 21 T T A 56 CYP4F3 4051 genome.wustl.edu 36 19 15617570 15617570 + Silent SNP G G A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 15617570 15617570 CYP4F3 19 G G A 47 SATB1 6304 genome.wustl.edu 36 3 18411363 18411363 + Silent SNP G G C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 18411363 18411363 SATB1 3 G G C 45 SEC23B 10483 genome.wustl.edu 36 20 18444360 18444360 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 18444360 18444360 SEC23B 20 A A C 14 OR4L1 122742 genome.wustl.edu 36 14 19598948 19598948 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 19598948 19598948 OR4L1 14 G G T 39 SLCO1C1 53919 genome.wustl.edu 36 12 20781415 20781416 + Missense DNP CA CA AG novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 CA CA CA AG CA CA Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense DNP 20781415 20781416 SLCO1C1 12 CA CA AG 17 FOXA2 3170 genome.wustl.edu 36 20 22511343 22511343 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 22511343 22511343 FOXA2 20 C C A 28 LOC646864 646864 genome.wustl.edu 36 19 22832529 22832529 + Silent SNP G G A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 22832529 22832529 LOC646864 19 G G A 33 ATAD2B 54454 genome.wustl.edu 36 2 23946050 23946050 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 23946050 23946050 ATAD2B 2 T T C 56 LOC388931 388931 genome.wustl.edu 36 2 24092584 24092584 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 24092584 24092584 LOC388931 2 G G T 42 LOC653720 653720 genome.wustl.edu 36 15 26752020 26752020 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 26752020 26752020 LOC653720 15 C C T 27 GTF3C1 2975 genome.wustl.edu 36 16 27416611 27416611 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 27416611 27416611 GTF3C1 16 C C T 22 CPVL 54504 genome.wustl.edu 36 7 29077912 29077912 + Splice_Site_SNP SNP A A C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 29077912 29077912 CPVL 7 A A C 6 MECR 51102 genome.wustl.edu 36 1 29395312 29395312 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 29395312 29395312 MECR 1 G G A 39 ITGAL 3683 genome.wustl.edu 36 16 30394135 30394135 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 30394135 30394135 ITGAL 16 G G A 40 LARGE 9215 genome.wustl.edu 36 22 32042112 32042112 + Missense_Mutation SNP G C C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G C C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 32042112 32042112 LARGE 22 G C C 48 NOTCH4 4855 genome.wustl.edu 36 6 32296776 32296776 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 32296776 32296776 NOTCH4 6 C C T 25 LOC100132910 genome.wustl.edu 36 18 35168915 35168915 + Missense_Mutation SNP G C C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G C C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 35168915 35168915 LOC100132910 18 G C C 40 UNC5D 137970 genome.wustl.edu 36 8 35663633 35663633 + Silent SNP A A G novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 35663633 35663633 UNC5D 8 A A G 4 ENSG00000100181 0 genome.wustl.edu 36 22 37087469 37087469 + Silent SNP G A A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 37087469 37087469 ENSG00000100181 22 G A A 41 FAM21B 55747 genome.wustl.edu 36 10 47431114 47431114 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 47431114 47431114 FAM21B 10 G G C 35 MOCS3 27304 genome.wustl.edu 36 20 49008919 49008919 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 49008919 49008919 MOCS3 20 C C A 30 NFATC2 4773 genome.wustl.edu 36 20 49573866 49573866 + Silent SNP C C T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 49573866 49573866 NFATC2 20 C C T 23 MYO5A 4644 genome.wustl.edu 36 15 50505448 50505448 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 50505448 50505448 MYO5A 15 G G C 34 SLC35F4 341880 genome.wustl.edu 36 14 57133217 57133217 + Nonsense_Mutation SNP G G T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 57133217 57133217 SLC35F4 14 G G T 45 TBK1 29110 genome.wustl.edu 36 12 63175583 63175583 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 63175583 63175583 TBK1 12 A A T 12 CCDC88B 283234 genome.wustl.edu 36 11 63868078 63868078 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 63868078 63868078 CCDC88B 11 G G C 48 FOS 2353 genome.wustl.edu 36 14 74817470 74817470 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 74817470 74817470 FOS 14 A A C 5 MSH4 4438 genome.wustl.edu 36 1 76127640 76127640 + Nonsense_Mutation SNP G G T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 76127640 76127640 MSH4 1 G G T 33 ZNF592 9640 genome.wustl.edu 36 15 83144123 83144123 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 83144123 83144123 ZNF592 15 G G C 41 KCMF1 56888 genome.wustl.edu 36 2 85126817 85126817 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 85126817 85126817 KCMF1 2 C C T 29 IQGAP1 8826 genome.wustl.edu 36 15 88820975 88820975 + Missense_Mutation SNP A G G novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A G G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 88820975 88820975 IQGAP1 15 A G G 7 MMP8 4317 genome.wustl.edu 36 11 102092273 102092273 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 102092273 102092273 MMP8 11 A A G 11 RGPD3 653489 genome.wustl.edu 36 2 106419448 106419448 + Silent SNP G G A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 106419448 106419448 RGPD3 2 G G A 42 ACACB 32 genome.wustl.edu 36 12 108145067 108145067 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 108145067 108145067 ACACB 12 G G T 48 FDXACB1 genome.wustl.edu 36 11 111251600 111251600 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 111251600 111251600 FDXACB1 11 A A T 9 FKBP15 23307 genome.wustl.edu 36 9 114971419 114971419 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 114971419 114971419 FKBP15 9 A A T 11 KIAA1407 57577 genome.wustl.edu 36 3 115236543 115236543 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 115236543 115236543 KIAA1407 3 T T A 62 GOLGB1 2804 genome.wustl.edu 36 3 122892521 122892521 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 122892521 122892521 GOLGB1 3 C C T 27 RC3H2 54542 genome.wustl.edu 36 9 124662101 124662101 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 124662101 124662101 RC3H2 9 A A G 16 ARHGAP36 158763 genome.wustl.edu 36 X 130048248 130048248 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 130048248 130048248 ARHGAP36 23 C C A 20 ABO 28 genome.wustl.edu 36 9 135125043 135125043 + Splice_Site_SNP SNP C C T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 135125043 135125043 ABO 9 C C T 18 PCDHA3 56145 genome.wustl.edu 36 5 140161602 140161602 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 140161602 140161602 PCDHA3 5 A A G 13 HDAC3 8841 genome.wustl.edu 36 5 140989610 140989610 + Splice_Site_SNP SNP C C A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 140989610 140989610 HDAC3 5 C C A 18 FCRL3 115352 genome.wustl.edu 36 1 155915181 155915181 + Silent SNP T T C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 155915181 155915181 FCRL3 1 T T C 56 MME 4311 genome.wustl.edu 36 3 156317412 156317412 + Silent SNP C C G novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 156317412 156317412 MME 3 C C G 30 PAPPA2 60676 genome.wustl.edu 36 1 174935170 174935170 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 174935170 174935170 PAPPA2 1 G G T 44 EVX2 344191 genome.wustl.edu 36 2 176655383 176655383 + Silent SNP C C A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 176655383 176655383 EVX2 2 C C A 23 PGAP1 80055 genome.wustl.edu 36 2 197466198 197466198 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 197466198 197466198 PGAP1 2 T T C 56 ANKRD44 91526 genome.wustl.edu 36 2 197574733 197574733 + Silent SNP C C T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 197574733 197574733 ANKRD44 2 C C T 25 STK11IP 114790 genome.wustl.edu 36 2 220175042 220175042 + Missense_Mutation SNP C T T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C T T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 220175042 220175042 STK11IP 2 C T T 25 LYST 1130 genome.wustl.edu 36 1 234036550 234036550 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 234036550 234036550 LYST 1 G G A 41 RYR2 6262 genome.wustl.edu 36 1 236003483 236003483 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 236003483 236003483 RYR2 1 A A T 12 OR2T34 127068 genome.wustl.edu 36 1 246804504 246804504 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 246804504 246804504 OR2T34 1 G G T 35 ROR1 4919 genome.wustl.edu 36 1 64375704 64375704 + Missense_Mutation SNP G A G novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G A G G G Unknown Valid Somatic Phase_III Capture 454_PCR_WGA dbGAP Illumina GAIIx WashU Missense_Mutation SNP 64375704 64375704 ROR1 1 G A G 47 TSC2 7249 genome.wustl.edu 36 16 2076354 2076354 + Missense_Mutation SNP T G G novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 T T G G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 2076354 2076354 TSC2 16 T G G 53 XDH 7498 genome.wustl.edu 36 2 31424687 31424687 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 31424687 31424687 XDH 2 G G C 44 ABI3BP 25890 genome.wustl.edu 36 3 102087731 102087731 + Missense_Mutation SNP G G C Unknown TCGA-13-0903-01 TCGA-13-0903-10 G G G C G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 102087731 102087731 ABI3BP 3 G G C 48 AZI1 22994 genome.wustl.edu 36 17 76788158 76788158 + Missense_Mutation SNP C C A Unknown TCGA-13-0903-01 TCGA-13-0903-10 C C C A C C Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 76788158 76788158 AZI1 17 C C A 26