Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context ARHGEF10 9639 genome.wustl.edu 36 8 1799956 1799956 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 1799956 1799956 ARHGEF10 8 A A C 3 TSR1 55720 genome.wustl.edu 36 17 2183158 2183158 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 2183158 2183158 TSR1 17 C C G 24 FBXO18 84893 genome.wustl.edu 36 10 5998369 5998369 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 5998369 5998369 FBXO18 10 A A T 16 TP53 7157 genome.wustl.edu 36 17 7519280 7519280 + Splice_Site_SNP SNP C C A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 7519280 7519280 TP53 17 C C A 20 ARHGEF15 22899 genome.wustl.edu 36 17 8163429 8163429 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 8163429 8163429 ARHGEF15 17 A A G 11 PTH 5741 genome.wustl.edu 36 11 13470546 13470546 + Silent SNP A A G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 13470546 13470546 PTH 11 A A G 15 TMEM27 57393 genome.wustl.edu 36 X 15556023 15556023 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 15556023 15556023 TMEM27 23 G G A 43 TBC1D5 9779 genome.wustl.edu 36 3 17254817 17254817 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 17254817 17254817 TBC1D5 3 C C G 20 SYT17 51760 genome.wustl.edu 36 16 19102587 19102587 + Missense_Mutation SNP T T G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 19102587 19102587 SYT17 16 T T G 56 HRH4 59340 genome.wustl.edu 36 18 20311424 20311424 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 20311424 20311424 HRH4 18 A A T 16 ZNF429 353088 genome.wustl.edu 36 19 21505300 21505300 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 21505300 21505300 ZNF429 19 G G C 37 LOC100129306 genome.wustl.edu 36 13 26489838 26489838 + Silent SNP A A G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 26489838 26489838 LOC100129306 13 A A G 6 IFT172 26160 genome.wustl.edu 36 2 27561810 27561810 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 27561810 27561810 IFT172 2 G G A 48 ATP2A1 487 genome.wustl.edu 36 16 28813022 28813022 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 28813022 28813022 ATP2A1 16 G G A 45 WAC 51322 genome.wustl.edu 36 10 28940858 28940858 + Splice_Site_SNP SNP G G T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 28940858 28940858 WAC 10 G G T 44 MTMR12 54545 genome.wustl.edu 36 5 32277959 32277959 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 32277959 32277959 MTMR12 5 C C G 32 APOBEC3B 9582 genome.wustl.edu 36 22 37717443 37717443 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C T C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 37717443 37717443 APOBEC3B 22 C C T 27 ADAMTS20 80070 genome.wustl.edu 36 12 42134112 42134112 + Missense_Mutation SNP T T G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 42134112 42134112 ADAMTS20 12 T T G 51 NCOA3 8202 genome.wustl.edu 36 20 45711202 45711202 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 45711202 45711202 NCOA3 20 C C G 24 GDF2 2658 genome.wustl.edu 36 10 48033912 48033912 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 48033912 48033912 GDF2 10 G G C 42 SIX5 147912 genome.wustl.edu 36 19 50963225 50963225 + Silent SNP G A A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G A A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 50963225 50963225 SIX5 19 G A A 35 AKAP1 8165 genome.wustl.edu 36 17 52549231 52549231 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 52549231 52549231 AKAP1 17 T T A 58 AURKA 6790 genome.wustl.edu 36 20 54381930 54381930 + Silent SNP T T C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 54381930 54381930 AURKA 20 T T C 50 LYN 4067 genome.wustl.edu 36 8 57041944 57041944 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 57041944 57041944 LYN 8 G G C 40 KIAA1468 57614 genome.wustl.edu 36 18 58045512 58045512 + Nonsense_Mutation SNP T T G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 58045512 58045512 KIAA1468 18 T T G 61 GIF 2694 genome.wustl.edu 36 11 59366546 59366546 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 59366546 59366546 GIF 11 T T A 50 MYT1 4661 genome.wustl.edu 36 20 62313927 62313927 + Silent SNP G G A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 62313927 62313927 MYT1 20 G G A 38 ZBTB1 22890 genome.wustl.edu 36 14 64059932 64059932 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 64059932 64059932 ZBTB1 14 A A T 16 TAF1 6872 genome.wustl.edu 36 X 70544593 70544593 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 70544593 70544593 TAF1 23 C C G 20 MPHOSPH10 10199 genome.wustl.edu 36 2 71230613 71230613 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 71230613 71230613 MPHOSPH10 2 A A G 3 RIMS1 22999 genome.wustl.edu 36 6 73040845 73040845 + Silent SNP G G A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 73040845 73040845 RIMS1 6 G G A 39 ENSG00000119660 genome.wustl.edu 36 14 74828581 74828581 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 74828581 74828581 ENSG00000119660 14 G G A 44 C11orf30 56946 genome.wustl.edu 36 11 75852728 75852728 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 75852728 75852728 C11orf30 11 T T C 56 SENP6 26054 genome.wustl.edu 36 6 76429850 76429850 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 76429850 76429850 SENP6 6 C C G 20 ADCK1 57143 genome.wustl.edu 36 14 77423291 77423291 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 77423291 77423291 ADCK1 14 G G T 35 PRC1 9055 genome.wustl.edu 36 15 89318428 89318428 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 89318428 89318428 PRC1 15 G G C 35 STAG3 10734 genome.wustl.edu 36 7 99634112 99634112 + Silent SNP C C A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 99634112 99634112 STAG3 7 C C A 24 MUC3B 57876 genome.wustl.edu 36 7 100390098 100390098 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 100390098 100390098 MUC3B 7 C C A 32 STAB2 55576 genome.wustl.edu 36 12 102508878 102508878 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 102508878 102508878 STAB2 12 T T A 58 ACACB 32 genome.wustl.edu 36 12 108144727 108144727 + Silent SNP G G A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 108144727 108144727 ACACB 12 G G A 39 OVGP1 5016 genome.wustl.edu 36 1 111770772 111770772 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 111770772 111770772 OVGP1 1 G G C 36 SIK3 23387 genome.wustl.edu 36 11 116237306 116237306 + Missense_Mutation SNP T T G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 116237306 116237306 SIK3 11 T T G 61 INPP5F 22876 genome.wustl.edu 36 10 121577046 121577046 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 121577046 121577046 INPP5F 10 G G T 48 BCORL1 63035 genome.wustl.edu 36 X 128974829 128974829 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 128974829 128974829 BCORL1 23 A A T 5 MTHFD1L 25902 genome.wustl.edu 36 6 151372769 151372769 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 151372769 151372769 MTHFD1L 6 G G C 46 NUP210L 91181 genome.wustl.edu 36 1 152299686 152299686 + Missense_Mutation SNP T T G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 152299686 152299686 NUP210L 1 T T G 55 NUP210L 91181 genome.wustl.edu 36 1 152365549 152365549 + Silent SNP T T C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 152365549 152365549 NUP210L 1 T T C 51 GPR149 344758 genome.wustl.edu 36 3 155629297 155629297 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 155629297 155629297 GPR149 3 A A C 11 IGF2R 3482 genome.wustl.edu 36 6 160424983 160424983 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 160424983 160424983 IGF2R 6 C C G 23 ODZ2 57451 genome.wustl.edu 36 5 167550038 167550038 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 167550038 167550038 ODZ2 5 G G T 42 NEK1 4750 genome.wustl.edu 36 4 170713557 170713557 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 170713557 170713557 NEK1 4 C C T 19 TNIK 23043 genome.wustl.edu 36 3 172340001 172340001 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 172340001 172340001 TNIK 3 C C A 20 PIK3CA 5290 genome.wustl.edu 36 3 180411038 180411038 + Silent SNP C C T novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 180411038 180411038 PIK3CA 3 C C T 19 LAMP3 27074 genome.wustl.edu 36 3 184352986 184352986 + Splice_Site_SNP SNP C C G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 184352986 184352986 LAMP3 3 C C G 24 SORBS2 8470 genome.wustl.edu 36 4 186773046 186773046 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 186773046 186773046 SORBS2 4 T T C 62 BOLL 66037 genome.wustl.edu 36 2 198339554 198339554 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 198339554 198339554 BOLL 2 A A C 11 OBSCN 84033 genome.wustl.edu 36 1 226499829 226499829 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 226499829 226499829 OBSCN 1 C C G 21 OR2W5 441932 genome.wustl.edu 36 1 245721382 245721382 + Silent SNP C C A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 245721382 245721382 OR2W5 1 C C A 23 BRCA2 675 genome.wustl.edu 36 13 31810178 31810178 + Frame_Shift_Del DEL T T - novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T - T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Frame_Shift_Del DEL 31810178 31810178 BRCA2 13 T T - 60 KCNA10 3744 genome.wustl.edu 36 1 110862267 110862267 + Silent SNP C C G Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 110862267 110862267 KCNA10 1 C C G 23 THNSL2 55258 genome.wustl.edu 36 2 88266539 88266539 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 88266539 88266539 THNSL2 2 C C A 23 PHF21B 112885 genome.wustl.edu 36 22 43691122 43691122 + Missense_Mutation SNP T T G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 43691122 43691122 PHF21B 22 T T G 58 ENSG00000214405 genome.wustl.edu 36 3 105264954 105264954 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 105264954 105264954 ENSG00000214405 3 C C G 17 EVC2 132884 genome.wustl.edu 36 4 5678506 5678517 + In_Frame_Del DEL TTCCATTTGGTC TTCCATTTGGTC - Unknown TCGA-13-0890-01 TCGA-13-0890-10 TTCCATTTGGTC TTCCATTTGGTC TTCCATTTGGTC - TTCCATTTGGTC TTCCATTTGGTC Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU In_Frame_Del DEL 5678506 5678517 EVC2 4 TTCCATTTGGTC TTCCATTTGGTC - 64 AWAT1 158833 genome.wustl.edu 36 X 69372713 69372713 + Missense_Mutation SNP C C T Unknown TCGA-13-0890-01 TCGA-13-0890-10 C C C T C C Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 69372713 69372713 AWAT1 23 C C T 19