Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq dbSNP_AF Algorithm RUNX3 864 hgsc.bcm.edu hg19 1 25229111 25229111 + Silent SNP G G A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . RUNX3 NM_001031680 exon6 c.C792T p.R264R GAAGGAGCGGTCA . 105.0 17.0 141.0 0.0 . 72 . . Atlas-SNP RNF11 26994 hgsc.bcm.edu hg19 1 51736890 51736890 + Missense_Mutation SNP T T C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . RNF11 NM_014372 exon3 c.T361C p.Y121H CACATCTATCACC . 61.0 6.0 51.0 0.0 . 10 . . Atlas-SNP TTN 7273 hgsc.bcm.edu hg19 2 179614477 179614477 + Missense_Mutation SNP T T A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . TTN NM_133379 exon46 c.A12650T p.Y4217F TTAATATATAATT . 145.0 8.0 134.0 0.0 . 18412 . . Atlas-SNP RHBDD1 84236 hgsc.bcm.edu hg19 2 227729638 227729638 + Missense_Mutation SNP G G A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc RHBDD1,arm,malignant_melanoma,0,1 RHBDD1 NM_001167608 exon4 c.G229A p.D77N CATGCTGATGATT . 98.0 9.0 131.0 0.0 . 34 . . Atlas-SNP DGKD 8527 hgsc.bcm.edu hg19 2 234299114 234299114 + Silent SNP C C A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . DGKD NM_152879 exon3 c.C333A p.V111V AAACGTCAACAAC . 85.0 7.0 91.0 0.0 . 106 . . Atlas-SNP CHCHD4 131474 hgsc.bcm.edu hg19 3 14158003 14158003 + Missense_Mutation SNP A A G novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . CHCHD4 NM_144636 exon3 c.T83C p.V28A TTGGTTACAAATA . 75.0 17.0 107.0 0.0 . 8 . . Atlas-SNP FYCO1 79443 hgsc.bcm.edu hg19 3 46008641 46008641 + Nonsense_Mutation SNP C C A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . FYCO1 NM_024513 exon8 c.G2185T p.E729X TAAGCTCTCTGTG . 48.0 4.0 51.0 0.0 . 115 . . Atlas-SNP LRIG1 26018 hgsc.bcm.edu hg19 3 66431944 66431944 + Missense_Mutation SNP G G A rs201954431 bycluster TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . LRIG1 NM_015541 exon17 c.C2729T p.A910V TCCATCGCTTTCC . 91.0 4.0 94.0 0.0 . 138 . . Atlas-SNP CCDC50 152137 hgsc.bcm.edu hg19 3 191107379 191107379 + Missense_Mutation SNP T T G novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . CCDC50 NM_178335 exon11 c.T1417G p.S473A TCAGAGTCCTCTC . 173.0 12.0 152.0 0.0 . 39 . . Atlas-SNP GLRA3 8001 hgsc.bcm.edu hg19 4 175564944 175564944 + Missense_Mutation SNP T T G novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . GLRA3 NM_006529 exon10 c.A1388C p.Q463P TAATCTTGCTGCT . 101.0 13.0 77.0 0.0 . 76 . . Atlas-SNP DNAH5 1767 hgsc.bcm.edu hg19 5 13776635 13776635 + Nonsense_Mutation SNP G G A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc DNAH5,caecum,carcinoma,+1,1 DNAH5 NM_001369 exon55 c.C9286T p.R3096X TGTTTCGAAATTT . 244.0 25.0 231.0 0.0 . 868 . . Atlas-SNP ZNF366 167465 hgsc.bcm.edu hg19 5 71756473 71756473 + Missense_Mutation SNP G G A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc ZNF366,colon,carcinoma,0,2 ZNF366 NM_152625 exon2 c.C851T p.T284M CAGTGCGTGCACG . 59.0 7.0 57.0 0.0 . 108 . . Atlas-SNP IQGAP2 10788 hgsc.bcm.edu hg19 5 75906955 75906955 + Missense_Mutation SNP C C T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . IQGAP2 NM_006633 exon13 c.C1468T p.H490Y CCAGCCCATGCCC . 74.0 10.0 108.0 0.0 . 186 . . Atlas-SNP ADRB2 154 hgsc.bcm.edu hg19 5 148206993 148206993 + Missense_Mutation SNP C C T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . ADRB2 NM_000024 exon1 c.C599T p.A200V CCTATGCCATTGC . 55.0 13.0 59.0 0.0 . 42 . . Atlas-SNP HIST1H3C 8352 hgsc.bcm.edu hg19 6 26045686 26045686 + Silent SNP T T A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . HIST1H3C NM_003531 exon1 c.T48A p.A16A CAAAGCTCCGCGC . 122.0 13.0 113.0 0.0 . 34 . . Atlas-SNP ZNF311 282890 hgsc.bcm.edu hg19 6 28963560 28963560 + Silent SNP T T G novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . ZNF311 NM_001010877 exon7 c.A1219C p.R407R GGATTCTTATGTG . 286.0 15.0 197.0 0.0 . 59 . . Atlas-SNP GSTA2 2939 hgsc.bcm.edu hg19 6 52617735 52617735 + Missense_Mutation SNP A A C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . GSTA2 NM_000846 exon5 c.T331G p.F111V GACTAAAGGGCAG . 88.0 8.0 94.0 0.0 . 33 . . Atlas-SNP TAAR2 9287 hgsc.bcm.edu hg19 6 132938785 132938785 + Missense_Mutation SNP C C A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc TAAR2,face,carcinoma,0,1 TAAR2 NM_001033080 exon2 c.G560T p.G187V TCTATTCCATCTG . 96.0 12.0 123.0 0.0 . 45 . . Atlas-SNP ZC3H12D 340152 hgsc.bcm.edu hg19 6 149771968 149771968 + Missense_Mutation SNP C C T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . ZC3H12D NM_207360 exon6 c.G1435A p.A479T CCCGGGCGCGCGC . 27.0 8.0 22.0 0.0 . 21 . . Atlas-SNP ZBTB2 57621 hgsc.bcm.edu hg19 6 151687673 151687673 + Missense_Mutation SNP C C A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . ZBTB2 NM_020861 exon3 c.G528T p.Q176H GGAGAGCTGTGAG . 77.0 15.0 89.0 0.0 . 30 . . Atlas-SNP PEG10 23089 hgsc.bcm.edu hg19 7 94292809 94292809 + Missense_Mutation SNP A A C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . PEG10 NM_001172438 exon2 c.A169C p.N57H CCCCCCAACAACA . 97.0 5.0 94.0 0.0 . 36 . . Atlas-SNP PEG10 23089 hgsc.bcm.edu hg19 7 94292810 94292810 + Missense_Mutation SNP A A C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . PEG10 NM_001172438 exon2 c.A170C p.N57T CCCCCAACAACAA . 99.0 4.0 94.0 0.0 . 36 . . Atlas-SNP LHFPL3 375612 hgsc.bcm.edu hg19 7 103969491 103969491 + Silent SNP G G T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . LHFPL3 NM_199000 exon1 c.G264T p.L88L GGAGCTGACCTGC . 65.0 13.0 62.0 0.0 . 24 . . Atlas-SNP PENK 5179 hgsc.bcm.edu hg19 8 57354357 57354357 + Missense_Mutation SNP C C T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . PENK NM_001135690 exon4 c.G278A p.S93N AAATGGCTTTCTT . 81.0 10.0 91.0 0.0 . 59 . . Atlas-SNP TRPA1 8989 hgsc.bcm.edu hg19 8 72975749 72975749 + Missense_Mutation SNP G G T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc TRPA1,NS,carcinoma,0,1 TRPA1 NM_007332 exon5 c.C610A p.Q204K CAGCTTGGTGAAT . 85.0 7.0 58.0 0.0 . 256 . . Atlas-SNP PMP2 5375 hgsc.bcm.edu hg19 8 82357195 82357195 + Missense_Mutation SNP T T C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . PMP2 NM_002677 exon2 c.A103G p.N35D CCAAATTTCCCAG . 104.0 22.0 82.0 0.0 . 21 . . Atlas-SNP CBWD1 55871 hgsc.bcm.edu hg19 9 154795 154795 + Silent SNP T T C rs76344156 TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . CBWD1 NM_001145356 exon8 c.A576G p.R192R AACTTGTCTAAAA . 5.0 5.0 0.0 0.0 . 24 . . Atlas-SNP TSC1 7248 hgsc.bcm.edu hg19 9 135781136 135781136 + Missense_Mutation SNP A A G novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . TSC1 NM_000368 exon15 c.T1829C p.V610A AATGCCACCTCAA . 150.0 10.0 141.0 0.0 . 167 . . Atlas-SNP ZNF33A 7581 hgsc.bcm.edu hg19 10 38343571 38343571 + Silent SNP T T C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . ZNF33A NM_006954 exon5 c.T519C p.C173C TGCCTGTGGGAAA . 55.0 11.0 84.0 0.0 . 103 . . Atlas-SNP SORBS1 10580 hgsc.bcm.edu hg19 10 97197265 97197265 + Missense_Mutation SNP T T A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . SORBS1 NM_001034955 exon2 c.A58T p.S20C CATTGCTGCCAGG . 148.0 11.0 189.0 0.0 . 185 . . Atlas-SNP TSSC4 10078 hgsc.bcm.edu hg19 11 2424029 2424029 + Missense_Mutation SNP G G T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . TSSC4 NM_005706 exon2 c.G166T p.G56W CTGCCTGGGGAGG . 100.0 12.0 94.0 0.0 . 19 . . Atlas-SNP CLEC1A 51267 hgsc.bcm.edu hg19 12 10228256 10228256 + Splice_Site SNP T T C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . CLEC1A NM_016511 exon5 c.392-2A>G . GTGTGCTTGGAAA . 117.0 7.0 99.0 0.0 . 48 . . Atlas-SNP LOH12CR1 118426 hgsc.bcm.edu hg19 12 12514204 12514204 + Silent SNP C C T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . LOH12CR1 NM_058169 exon2 c.C123T p.S41S GGGCTCCCAGGCC . 148.0 12.0 162.0 0.0 . 13 . . Atlas-SNP SETD8 387893 hgsc.bcm.edu hg19 12 123880924 123880924 + Missense_Mutation SNP T T G novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . SETD8 NM_020382 exon5 c.T542G p.L181R GCAAACTTACGGA . 34.0 8.0 50.0 0.0 . 35 . . Atlas-SNP GAS6 2621 hgsc.bcm.edu hg19 13 114537552 114537552 + Missense_Mutation SNP T T C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . GAS6 NM_000820 exon8 c.A806G p.K269R GACAGCTTGAGGC . 48.0 5.0 76.0 0.0 . 75 . . Atlas-SNP NIN 51199 hgsc.bcm.edu hg19 14 51190328 51190328 + Missense_Mutation SNP C C A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . NIN NM_020921 exon31 c.G6255T p.L2085F TTTCAACAACTGG . 111.0 18.0 136.0 0.0 . 475 . . Atlas-SNP PPP1R14D 54866 hgsc.bcm.edu hg19 15 41120819 41120819 + Silent SNP A A C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . PPP1R14D NM_017726 exon1 c.T21G p.A7A GCAGGAAGCAGGG . 70.0 14.0 86.0 0.0 . 8 . . Atlas-SNP WHAMM 123720 hgsc.bcm.edu hg19 15 83481941 83481941 + Silent SNP T T A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . WHAMM NM_001080435 exon2 c.T696A p.V232V ATTGGTTACCGTG . 192.0 32.0 260.0 0.0 . 63 . . Atlas-SNP ACAN 176 hgsc.bcm.edu hg19 15 89395101 89395101 + Silent SNP C C A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . ACAN NM_001135 exon11 c.C2103A p.I701I GTGGATCGTGACC . 130.0 23.0 184.0 0.0 . 220 . . Atlas-SNP CCDC137 339230 hgsc.bcm.edu hg19 17 79638802 79638802 + Nonsense_Mutation SNP C C T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . CCDC137 NM_199287 exon4 c.C526T p.R176X AAAGTCCGACGGA . 124.0 26.0 95.0 0.0 . 27 . . Atlas-SNP TMEM150B 284417 hgsc.bcm.edu hg19 19 55824349 55824349 + Missense_Mutation SNP C C T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . TMEM150B NM_001085488 exon8 c.G580A p.A194T AGAGCGCGAACAG . 86.0 11.0 98.0 0.0 . 19 . . Atlas-SNP ZNF133 7692 hgsc.bcm.edu hg19 20 18296766 18296766 + Missense_Mutation SNP C C A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . ZNF133 NM_001083330 exon4 c.C1268A p.T423N ATTCAACCCTCAT . 45.0 7.0 55.0 0.0 . 63 . . Atlas-SNP ERG 2078 hgsc.bcm.edu hg19 21 39755511 39755511 + Missense_Mutation SNP C C T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . ERG NM_001136154 exon12 c.G1275A p.M425I GGAGCCCATGTAC . 81.0 12.0 102.0 0.0 . 78 . . Atlas-SNP RTN4R 65078 hgsc.bcm.edu hg19 22 20229527 20229527 + Missense_Mutation SNP G G A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . RTN4R NM_023004 exon2 c.C1129T p.R377W TGTGCCGTGGGCC . 30.0 12.0 22.0 0.0 . 14 . . Atlas-SNP THOC5 8563 hgsc.bcm.edu hg19 22 29907254 29907254 + Missense_Mutation SNP T T A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . THOC5 NM_001002878 exon20 c.A1829T p.K610M AGCTCCTTGTAGC . 60.0 8.0 51.0 0.0 . 58 . . Atlas-SNP MYH9 4627 hgsc.bcm.edu hg19 22 36700184 36700184 + Silent SNP G G T novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . MYH9 NM_002473 exon19 c.C2247A p.L749L GCTGTCGAGCTCC . 103.0 16.0 119.0 0.0 . 225 . . Atlas-SNP CT45A5 441521 hgsc.bcm.edu hg19 X 134947978 134947978 + Missense_Mutation SNP G G C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . CT45A5 NM_001007551 exon3 c.C347G p.P116R CTTTTGGGAGAGG . 79.0 30.0 68.0 0.0 . 26 . . Atlas-SNP ND2 0 hgsc.bcm.edu hg19 MT 4996 4996 + Missense_Mutation SNP G G A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . . ENST00000361453 exon1 c.G527A p.R176H AGCTACGCAAAAT . 142.0 13.0 26.0 0.0 . . . . Atlas-SNP ND5 0 hgsc.bcm.edu hg19 MT 14108 14108 + Missense_Mutation SNP T T C novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . . ENST00000361567 exon1 c.T1772C p.F591S TCTCTTTCTTCTT . 154.0 39.0 26.0 0.0 . . . . Atlas-SNP PSMA8 143471 hgsc.bcm.edu hg19 18 23772351 23772352 + Frame_Shift_Ins INS - - A novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc PSMA8,rectum,carcinoma,0,1 PSMA8 NM_144662 exon7 c.747_748insA p.K249fs . . 98.0 16.0 73.0 0.0 . 36 . . Atlas-Indel,Pindel ARID1A 8289 hgsc.bcm.edu hg19 1 27106176 27106176 + Frame_Shift_Del DEL T T - novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . ARID1A NM_006015 exon20 c.5786delG p.S1929fs . . 111.0 10.0 114.0 0.0 . 842 . . Atlas-INDEL CELSR3 1951 hgsc.bcm.edu hg19 3 48691840 48691874 + Frame_Shift_Del DEL GTTGGGGACACCTCCCAGAAGAAGAGGGCCCGTCA GTTGGGGACACCTCCCAGAAGAAGAGGGCCCGTCA - novel TCGA-KR-A7K8-01A-11D-A33K-10 TCGA-KR-A7K8-10A-01D-A33K-10 GTTGGGGACACCTCCCAGAAGAAGAGGGCCCGTCA GTTGGGGACACCTCCCAGAAGAAGAGGGCCCGTCA . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a4fc5ba8-74ba-4047-8857-5d6d6cbc978b 96ab975c-1da6-431f-a23b-cbfeaf1697dc . CELSR3 NM_001407 exon7 c.5001_5035del p.1667_1679del . . 146.0 12.0 273.0 0.0 . 237 . . Pindel