Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	dbSNP_AF	Algorithm
PLEKHM2	23207	hgsc.bcm.edu	hg19	1	16059140	16059140	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PLEKHM2	NM_015164	exon19	c.C2839T	p.P947S	CTCCCGCCCTGGG	.	28.0	10.0	28.0	0.0	.	94	.	.	Atlas-SNP
CHTOP	26097	hgsc.bcm.edu	hg19	1	153615718	153615718	+	Missense_Mutation	SNP	G	G	A	rs138105302		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	CHTOP	NM_001206612	exon5	c.G422A	p.R141Q	TGCTCCGAGGTGG	.	145.0	13.0	83.0	0.0	.	34	.	G|1.000;A|0.000	Atlas-SNP
PYHIN1	149628	hgsc.bcm.edu	hg19	1	158908870	158908870	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PYHIN1	NM_152501	exon4	c.A412C	p.K138Q	TTGTAGAAAAGAA	.	176.0	17.0	105.0	0.0	.	208	.	.	Atlas-SNP
KIAA1614	57710	hgsc.bcm.edu	hg19	1	180907742	180907742	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	KIAA1614	NM_020950	exon6	c.C2813T	p.T938M	ACTCCACGGGCAT	.	161.0	29.0	97.0	0.0	.	75	.	.	Atlas-SNP
TRIM67	440730	hgsc.bcm.edu	hg19	1	231349708	231349708	+	Silent	SNP	C	C	G	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TRIM67	NM_001004342	exon9	c.C2271G	p.L757L	CAGCCTCAACCGC	.	171.0	23.0	133.0	0.0	.	160	.	.	Atlas-SNP
KIF26B	55083	hgsc.bcm.edu	hg19	1	245530501	245530501	+	Silent	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	KIF26B	NM_018012	exon3	c.G831A	p.A277A	TGGGGCGGAAAAG	.	260.0	23.0	152.0	0.0	.	343	.	.	Atlas-SNP
OR2T6	254879	hgsc.bcm.edu	hg19	1	248551768	248551768	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	OR2T6	NM_001005471	exon1	c.C859T	p.P287S	TTAAACCCTCTCA	.	152.0	34.0	101.0	0.0	.	101	.	.	Atlas-SNP
SLC15A2	6565	hgsc.bcm.edu	hg19	3	121630500	121630500	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SLC15A2	NM_021082	exon4	c.C415A	p.Q139K	GGAGGACAAGTGG	.	86.0	18.0	72.0	0.0	.	92	.	.	Atlas-SNP
COL6A5	256076	hgsc.bcm.edu	hg19	3	130107781	130107781	+	Silent	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	COL6A5	NM_153264	exon6	c.G2220A	p.A740A	AGTAGCGCAGGAT	.	120.0	44.0	110.0	0.0	.	205	.	.	Atlas-SNP
EPHB1	2047	hgsc.bcm.edu	hg19	3	134670256	134670256	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	EPHB1_ENST00000398015,rectum,carcinoma,0,5	EPHB1	NM_004441	exon3	c.G167A	p.R56H	CCATCCGCACCTA	.	74.0	10.0	64.0	0.0	.	519	.	.	Atlas-SNP
MUC4	4585	hgsc.bcm.edu	hg19	3	195487851	195487851	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MUC4	NM_018406	exon16	c.T14752A	p.S4918T	TGCATGAGCTATC	.	131.0	15.0	82.0	0.0	.	1505	.	.	Atlas-SNP
MUC4	4585	hgsc.bcm.edu	hg19	3	195512654	195512654	+	Missense_Mutation	SNP	C	C	G	rs75106502		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MUC4	NM_018406	exon2	c.G5797C	p.D1933H	TGGTGTCACCTGT	.	144.0	10.0	104.0	0.0	.	1505	.	C|0.500;G|0.500	Atlas-SNP
GABRA4	2557	hgsc.bcm.edu	hg19	4	46976276	46976276	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	GABRA4	NM_000809	exon6	c.T694C	p.S232P	CACTTGATACGGT	.	84.0	12.0	80.0	0.0	.	129	.	.	Atlas-SNP
ANKH	56172	hgsc.bcm.edu	hg19	5	14749332	14749332	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ANKH	NM_054027	exon6	c.T771G	p.I257M	GTTGACAATAGGC	.	63.0	10.0	59.0	0.0	.	64	.	.	Atlas-SNP
NFKBIL1	4795	hgsc.bcm.edu	hg19	6	31515977	31515977	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	NFKBIL1	NM_005007	exon2	c.G95A	p.R32H	GCCAACGCCGAGA	.	61.0	7.0	58.0	0.0	.	17	.	.	Atlas-SNP
TMEM200A	114801	hgsc.bcm.edu	hg19	6	130761733	130761733	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TMEM200A	NM_001258277	exon3	c.C166T	p.R56W	AAAATCCGGCTTT	.	142.0	12.0	108.0	0.0	.	108	.	.	Atlas-SNP
ARID1B	57492	hgsc.bcm.edu	hg19	6	157099362	157099362	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ARID1B	NM_017519	exon1	c.T299A	p.L100H	ACCACCTCCACCA	.	36.0	8.0	28.0	0.0	.	320	.	.	Atlas-SNP
RPS6KA2	6196	hgsc.bcm.edu	hg19	6	166912106	166912106	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	RPS6KA2	NM_001006932	exon9	c.G661A	p.D221N	TCTTGTCGTGGTC	.	62.0	6.0	51.0	0.0	.	212	.	.	Atlas-SNP
BAZ1B	9031	hgsc.bcm.edu	hg19	7	72891607	72891607	+	Silent	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	BAZ1B	NM_032408	exon7	c.C2184T	p.F728F	TTCTAGGAACTCA	.	79.0	21.0	74.0	0.0	.	147	.	.	Atlas-SNP
VPS13B	157680	hgsc.bcm.edu	hg19	8	100711796	100711796	+	Silent	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	VPS13B	NM_017890	exon36	c.G6165T	p.L2055L	AAACCTGAGTTTC	.	133.0	6.0	77.0	0.0	.	811	.	.	Atlas-SNP
EIF3E	3646	hgsc.bcm.edu	hg19	8	109240530	109240530	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	EIF3E,NS,carcinoma,0,1	EIF3E	NM_001568	exon7	c.G688C	p.D230H	TATTATCGCGACC	.	460.0	50.0	251.0	1.0	.	73	.	.	Atlas-SNP
LRRTM3	347731	hgsc.bcm.edu	hg19	10	68686790	68686790	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	LRRTM3_ENST00000361320,NS,carcinoma,0,2	LRRTM3	NM_178011	exon2	c.G116T	p.R39M	GCTGTAGGTGTGA	.	97.0	8.0	92.0	0.0	.	241	.	.	Atlas-SNP
MKI67	4288	hgsc.bcm.edu	hg19	10	129913861	129913861	+	Missense_Mutation	SNP	C	C	T	rs201650569	bycluster	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	MKI67,NS,carcinoma,0,1	MKI67	NM_002417	exon7	c.G811A	p.A271T	CTGTTGCGTAATC	.	81.0	18.0	46.0	0.0	.	363	.	.	Atlas-SNP
MUC2	4583	hgsc.bcm.edu	hg19	11	1083119	1083119	+	Silent	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MUC2	NM_002457	exon16	c.C2019T	p.T673T	GACCACCTGCCAG	.	15.0	8.0	7.0	0.0	.	614	.	.	Atlas-SNP
SLCO2B1	11309	hgsc.bcm.edu	hg19	11	74880711	74880711	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SLCO2B1	NM_007256	exon6	c.G683A	p.G228E	TTGTAGGGATCCT	.	79.0	8.0	47.0	0.0	.	84	.	.	Atlas-SNP
AKAP3	10566	hgsc.bcm.edu	hg19	12	4724998	4724998	+	Silent	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	AKAP3	NM_006422	exon5	c.G2469A	p.S823S	CAGCACCGACTGC	.	134.0	21.0	96.0	0.0	.	212	.	.	Atlas-SNP
DPY19L2	283417	hgsc.bcm.edu	hg19	12	64057564	64057564	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	DPY19L2,NS,carcinoma,0,1	DPY19L2	NM_173812	exon3	c.C424T	p.R142W	TCTCCCGTTCCAA	.	392.0	47.0	509.0	0.0	.	97	.	.	Atlas-SNP
EEA1	8411	hgsc.bcm.edu	hg19	12	93170633	93170633	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	EEA1	NM_003566	exon28	c.T4100C	p.V1367A	ACTGTTACTGAAA	.	83.0	14.0	78.0	0.0	.	104	.	.	Atlas-SNP
PABPC3	5042	hgsc.bcm.edu	hg19	13	25671806	25671806	+	Silent	SNP	T	T	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	PABPC3,colon,carcinoma,0,1	PABPC3	NM_030979	exon1	c.T1470A	p.A490A	TGCAGCTGCTGCT	.	55.0	3.0	41.0	0.0	.	129	.	.	Atlas-SNP
YY1	7528	hgsc.bcm.edu	hg19	14	100705845	100705845	+	Silent	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	YY1	NM_003403	exon1	c.G264T	p.P88P	GCAGCCGCTGGTC	.	47.0	7.0	30.0	0.0	.	20	.	.	Atlas-SNP
TJP1	7082	hgsc.bcm.edu	hg19	15	30010303	30010303	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	TJP1,NS,carcinoma,0,1	TJP1	NM_003257	exon22	c.A3896G	p.K1299R	GAAGGTTTAGATG	.	134.0	30.0	105.0	1.0	.	140	.	.	Atlas-SNP
DNAJA4	55466	hgsc.bcm.edu	hg19	15	78562999	78562999	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	DNAJA4	NM_018602	exon3	c.G380A	p.R127Q	GTGGACGGATGGC	.	111.0	22.0	83.0	0.0	.	63	.	.	Atlas-SNP
PFAS	5198	hgsc.bcm.edu	hg19	17	8170947	8170947	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PFAS	NM_012393	exon26	c.G3346A	p.G1116S	GTGGGCGGCTTCA	.	77.0	9.0	54.0	0.0	.	91	.	.	Atlas-SNP
TADA2A	6871	hgsc.bcm.edu	hg19	17	35804825	35804825	+	Silent	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TADA2A	NM_001488	exon8	c.T559C	p.L187L	TGGGACTTGAGAG	.	163.0	21.0	139.0	0.0	.	91	.	.	Atlas-SNP
BRIP1	83990	hgsc.bcm.edu	hg19	17	59821818	59821818	+	Silent	SNP	G	G	A	rs374362388		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	BRIP1_ENST00000259008,colon,carcinoma,0,2	BRIP1	NM_032043	exon15	c.C2232T	p.D744D	GATTGCGTCATAG	.	223.0	37.0	214.0	2.0	.	237	.	.	Atlas-SNP
FASN	2194	hgsc.bcm.edu	hg19	17	80049392	80049392	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	FASN	NM_004104	exon9	c.G1198A	p.V400M	TGTGCACGTTGGA	.	159.0	18.0	127.0	0.0	.	154	.	.	Atlas-SNP
C2CD4C	126567	hgsc.bcm.edu	hg19	19	407506	407506	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	C2CD4C	NM_001136263	exon2	c.C856G	p.P286A	GTTCCGGGGGTGC	.	13.0	7.0	1.0	0.0	.	13	.	.	Atlas-SNP
TUBB4A	10382	hgsc.bcm.edu	hg19	19	6495427	6495427	+	Silent	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	NM_006087	exon4	c.G1083A	p.L361L	CATCTTCAGGCCG	.	48.0	10.0	41.0	0.0	.	.	.	.	Atlas-SNP
RYR1	6261	hgsc.bcm.edu	hg19	19	38993172	38993172	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	RYR1,NS,carcinoma,0,1	RYR1	NM_001042723	exon48	c.C7640T	p.A2547V	AGATGGCGCTGGC	.	37.0	5.0	29.0	0.0	.	708	.	.	Atlas-SNP
SIGLEC8	27181	hgsc.bcm.edu	hg19	19	51961351	51961351	+	Silent	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SIGLEC8	NM_014442	exon1	c.A291G	p.Q97Q	AAGGAGTTGGAAT	.	147.0	24.0	168.0	0.0	.	130	.	.	Atlas-SNP
CNOT3	4849	hgsc.bcm.edu	hg19	19	54652191	54652191	+	Silent	SNP	C	C	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	CNOT3	NM_014516	exon11	c.C1203A	p.G401G	AGGCGGCGGCAGC	.	85.0	7.0	47.0	0.0	.	133	.	.	Atlas-SNP
ISM1	140862	hgsc.bcm.edu	hg19	20	13279761	13279761	+	Silent	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ISM1	NM_080826	exon6	c.C1050T	p.D350D	GAAGGACGCCAGC	.	64.0	6.0	64.0	0.0	.	41	.	.	Atlas-SNP
DHX35	60625	hgsc.bcm.edu	hg19	20	37630379	37630379	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	DHX35	NM_021931	exon9	c.C649T	p.R217W	AAATTCCGGGATT	.	53.0	7.0	45.0	0.0	.	82	.	.	Atlas-SNP
ACADL	33	hgsc.bcm.edu	hg19	2	211069378	211069379	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ACADL	NM_001608	exon7	c.797_798insA	p.I266fs	.	.	68.0	12.0	63.0	0.0	.	38	.	.	Atlas-Indel,Pindel