Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq dbSNP_AF Algorithm ANGPTL7 10218 hgsc.bcm.edu hg19 1 11249740 11249740 + Missense_Mutation SNP C C T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ANGPTL7 NM_021146 exon1 c.C104T p.P35L AGACACCAGCACA . 157.0 57.0 146.0 0.0 . 23 . . Atlas-SNP STMN1 3925 hgsc.bcm.edu hg19 1 26230232 26230232 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . STMN1 NM_005563 exon3 c.A86T p.K29I GATTCTTTTGACC . 71.0 20.0 61.0 0.0 . 22 . . Atlas-SNP CYP4B1 1580 hgsc.bcm.edu hg19 1 47279879 47279879 + Splice_Site SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . CYP4B1 NM_001099772 exon7 c.776-2A>G . TGGTTCAGACCAG . 83.0 26.0 74.0 0.0 . 81 . . Atlas-SNP CYP4A11 1579 hgsc.bcm.edu hg19 1 47400132 47400132 + Missense_Mutation SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . CYP4A11 NM_000778 exon7 c.T890C p.L297S TTGGCCAAGAGGA . 181.0 47.0 115.0 0.0 . 77 . . Atlas-SNP LRP8 7804 hgsc.bcm.edu hg19 1 53715077 53715077 + Missense_Mutation SNP G G A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . LRP8 NM_004631 exon18 c.C2828T p.S943F AGCTCGGAAAGAG . 111.0 34.0 94.0 0.0 . 58 . . Atlas-SNP PDE4DIP 9659 hgsc.bcm.edu hg19 1 144892215 144892215 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PDE4DIP NM_001002811 exon19 c.A3398T p.X1133L TGAAGCTATAGCT . 246.0 42.0 164.0 0.0 . 817 . . Atlas-SNP FLG2 388698 hgsc.bcm.edu hg19 1 152323287 152323287 + Silent SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . FLG2 NM_001014342 exon3 c.A6975T p.A2325A ATGACTTGCTCTA . 147.0 50.0 104.0 0.0 . 431 . . Atlas-SNP ASH1L 55870 hgsc.bcm.edu hg19 1 155319387 155319387 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ASH1L NM_018489 exon18 c.A7367G p.D2456G GAAGAATCTGCAA . 252.0 86.0 218.0 0.0 . 279 . . Atlas-SNP CD5L 922 hgsc.bcm.edu hg19 1 157805814 157805814 + Missense_Mutation SNP G G A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . CD5L NM_005894 exon3 c.C187T p.R63W GCTCCCGGCACAA . 80.0 29.0 45.0 0.0 . 112 . . Atlas-SNP SPTA1 6708 hgsc.bcm.edu hg19 1 158595952 158595952 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SPTA1 NM_003126 exon42 c.C5894A p.T1965N AGAAGAGTGAGGA . 164.0 49.0 101.0 0.0 . 720 . . Atlas-SNP FCRL6 343413 hgsc.bcm.edu hg19 1 159772232 159772232 + Silent SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . FCRL6 NM_001004310 exon1 c.T18A p.A6A GACGGCTGTGCTG . 62.0 17.0 42.0 0.0 . 61 . . Atlas-SNP SLC19A2 10560 hgsc.bcm.edu hg19 1 169446983 169446983 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SLC19A2 NM_006996 exon2 c.A217G p.I73V GATAAATTTCATT . 333.0 126.0 227.0 0.0 . 35 . . Atlas-SNP WNT9A 7483 hgsc.bcm.edu hg19 1 228109383 228109383 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . WNT9A NM_003395 exon4 c.A934T p.R312W GGCACCTACGGCC . 102.0 35.0 88.0 0.0 . 39 . . Atlas-SNP OBSCN 84033 hgsc.bcm.edu hg19 1 228447295 228447295 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . OBSCN NM_001271223 exon17 c.A4955T p.Q1652L TGGCCCAGGCCCA . 99.0 33.0 100.0 0.0 . 2142 . . Atlas-SNP PGBD5 79605 hgsc.bcm.edu hg19 1 230492898 230492898 + Missense_Mutation SNP C C G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PGBD5 NM_001258311 exon2 c.G501C p.M167I CGCCTTCATCTCC . 119.0 33.0 93.0 0.0 . 73 . . Atlas-SNP PCNXL2 80003 hgsc.bcm.edu hg19 1 233388234 233388234 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PCNXL2 NM_014801 exon7 c.A1994G p.N665S TGTCTATTGCCCT . 137.0 50.0 129.0 0.0 . 204 . . Atlas-SNP RYR2 6262 hgsc.bcm.edu hg19 1 237814791 237814791 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . RYR2 NM_001035 exon51 c.T7814A p.M2605K CAAAGATGCCTCT . 206.0 77.0 141.0 0.0 . 1273 . . Atlas-SNP WDR64 128025 hgsc.bcm.edu hg19 1 241912886 241912886 + Silent SNP G G A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . WDR64 NM_144625 exon13 c.G1602A p.E534E GCAGGAGATGAAG . 244.0 31.0 159.0 0.0 . 234 . . Atlas-SNP OR2G2 81470 hgsc.bcm.edu hg19 1 247752022 247752022 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . OR2G2 NM_001001915 exon1 c.A361T p.M121L GCTGTGATGTCCT . 155.0 39.0 114.0 0.0 . 88 . . Atlas-SNP OR14C36 127066 hgsc.bcm.edu hg19 1 248512548 248512548 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . OR14C36 NM_001001918 exon1 c.A472T p.T158S ATGCACACTGGCA . 51.0 13.0 37.0 0.0 . 113 . . Atlas-SNP SPTBN1 6711 hgsc.bcm.edu hg19 2 54873140 54873140 + Missense_Mutation SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SPTBN1 NM_003128 exon22 c.A4570G p.I1524V CTGTTAATAAAGA . 84.0 33.0 61.0 0.0 . 378 . . Atlas-SNP SLC5A7 60482 hgsc.bcm.edu hg19 2 108614395 108614395 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SLC5A7 NM_021815 exon5 c.G550T p.V184L TATTCTGTGGCCT . 162.0 59.0 132.0 0.0 . 109 . . Atlas-SNP SCN2A 6326 hgsc.bcm.edu hg19 2 166210790 166210790 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SCN2A NM_001040143 exon16 c.T3008C p.L1003P ATAATCTCCAGAT . 179.0 70.0 157.0 0.0 . 589 . . Atlas-SNP TLK1 9874 hgsc.bcm.edu hg19 2 171863315 171863315 + Silent SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . TLK1 NM_012290 exon16 c.A1593T p.T531T CGTATCTGTATCC . 135.0 48.0 92.0 0.0 . 134 . . Atlas-SNP MAP2 4133 hgsc.bcm.edu hg19 2 210560650 210560650 + Silent SNP A A T rs185809016 by1000genomes;alternate_allele TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . MAP2 NM_002374 exon7 c.A3756T p.S1252S CCGCTCAGACACC . 108.0 49.0 85.0 0.0 . 372 . A|0.997;C|0.003 Atlas-SNP ABCA12 26154 hgsc.bcm.edu hg19 2 215823030 215823030 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ABCA12 NM_173076 exon41 c.T6088A p.Y2030N CCCAGTAGCATGT . 141.0 45.0 83.0 0.0 . 368 . . Atlas-SNP TRIP12 9320 hgsc.bcm.edu hg19 2 230638898 230638898 + Missense_Mutation SNP G G C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . TRIP12 NM_004238 exon37 c.C5384G p.T1795S GGCAGAGTGAAAT . 105.0 42.0 74.0 0.0 . 207 . . Atlas-SNP DGKD 8527 hgsc.bcm.edu hg19 2 234299052 234299052 + Missense_Mutation SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . DGKD NM_152879 exon3 c.A271G p.I91V TAGTCAATCATAT . 95.0 43.0 75.0 0.0 . 106 . . Atlas-SNP SETMAR 6419 hgsc.bcm.edu hg19 3 4354838 4354838 + Missense_Mutation SNP A A C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SETMAR NM_001243723 exon2 c.A413C p.Q138P GTCTACAGTTCCA . 98.0 29.0 74.0 0.0 . 30 . . Atlas-SNP NBEAL2 23218 hgsc.bcm.edu hg19 3 47044767 47044767 + Silent SNP C C T rs201985571 bycluster TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . NBEAL2 NM_015175 exon35 c.C5688T p.L1896L CCAGCTCGGCGAG . 122.0 41.0 95.0 0.0 . 267 . C|0.998;T|0.002 Atlas-SNP MITF 4286 hgsc.bcm.edu hg19 3 69788758 69788758 + Nonsense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . MITF NM_198159 exon1 c.G10T p.E4X CAGTCCGAATCGG . 86.0 20.0 73.0 0.0 . 156 . . Atlas-SNP CASR 846 hgsc.bcm.edu hg19 3 121976018 121976018 + Silent SNP G G T rs201013419 alternate_allele TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . CASR NM_001178065 exon3 c.G276T p.T92T CTTGACGCTGGGA . 150.0 44.0 103.0 0.0 . 190 . G|0.999;A|0.001 Atlas-SNP RTP2 344892 hgsc.bcm.edu hg19 3 187416345 187416345 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . RTP2 NM_001004312 exon2 c.T619A p.S207T AGAGAGAGGCCCA . 112.0 38.0 75.0 0.0 . 38 . . Atlas-SNP RGS12 6002 hgsc.bcm.edu hg19 4 3318367 3318367 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . RGS12 NM_002926 exon2 c.G470T p.C157F GCCTTTGTGCGAG . 87.0 4.0 50.0 0.0 . 128 . . Atlas-SNP GABRG1 2565 hgsc.bcm.edu hg19 4 46067562 46067562 + Missense_Mutation SNP C C A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . GABRG1 NM_173536 exon4 c.G361T p.D121Y GACTGTCAAACCA . 70.0 18.0 62.0 0.0 . 172 . . Atlas-SNP PAICS 10606 hgsc.bcm.edu hg19 4 57325638 57325638 + Silent SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PAICS NM_001079525 exon10 c.A1233T p.A411A GCGAGCAAGCATT . 232.0 78.0 153.0 0.0 . 21 . . Atlas-SNP UGT2B7 7364 hgsc.bcm.edu hg19 4 69962793 69962793 + Silent SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . UGT2B7 NM_001074 exon1 c.A555G p.G185G TAGTGGAGGATTT . 146.0 54.0 107.0 0.0 . 79 . . Atlas-SNP FABP2 2169 hgsc.bcm.edu hg19 4 120241841 120241841 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . FABP2 NM_000134 exon2 c.A224T p.D75V GTTCCGTCTGCTA . 35.0 12.0 36.0 0.0 . 21 . . Atlas-SNP INPP4B 8821 hgsc.bcm.edu hg19 4 143324209 143324209 + Splice_Site SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . INPP4B NM_003866 exon9 c.256-2A>T . GTTCCCTGTAACA . 83.0 29.0 68.0 0.0 . 132 . . Atlas-SNP FRG1 2483 hgsc.bcm.edu hg19 4 190878604 190878604 + Missense_Mutation SNP G G A rs371189769 TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . FRG1 NM_004477 exon6 c.G484A p.A162T AATGAAGCAGGGG . 265.0 16.0 204.0 0.0 . 76 . . Atlas-SNP NKD2 85409 hgsc.bcm.edu hg19 5 1034416 1034416 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . NKD2 NM_001271082 exon6 c.T397A p.F133I TATGACTTTGACA . 95.0 25.0 88.0 0.0 . 39 . . Atlas-SNP TERT 7015 hgsc.bcm.edu hg19 5 1266629 1266629 + Silent SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . TERT NM_001193376 exon10 c.T2604C p.D868D GAAATCATCCACC . 144.0 58.0 127.0 0.0 . 2594 . . Atlas-SNP CTNND2 1501 hgsc.bcm.edu hg19 5 11098730 11098730 + Missense_Mutation SNP C C A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . CTNND2 NM_001332 exon15 c.G2594T p.G865V GCCGCCCCTTCCA . 86.0 4.0 64.0 0.0 . 289 . . Atlas-SNP ITGA1 3672 hgsc.bcm.edu hg19 5 52235677 52235677 + Missense_Mutation SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ITGA1 NM_181501 exon26 c.A3188G p.N1063S ACTGCAATACATG . 265.0 77.0 186.0 0.0 . 112 . . Atlas-SNP ESM1 11082 hgsc.bcm.edu hg19 5 54277844 54277844 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ESM1 NM_007036 exon2 c.C432A p.N144K AAATCTGTTGGAA . 138.0 48.0 99.0 0.0 . 27 . . Atlas-SNP KDM3B 51780 hgsc.bcm.edu hg19 5 137753199 137753199 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . KDM3B NM_016604 exon13 c.A3335T p.H1112L TGGTACATGCTGC . 110.0 5.0 75.0 0.0 . 177 . . Atlas-SNP PCDHA12 56137 hgsc.bcm.edu hg19 5 140255480 140255480 + Silent SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PCDHA12 NM_018903 exon1 c.T423A p.P141P GGTACCTGTTTCT . 219.0 75.0 169.0 0.0 . 196 . . Atlas-SNP PCDHA13 56136 hgsc.bcm.edu hg19 5 140262777 140262777 + Silent SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PCDHA13 NM_031865 exon1 c.A924T p.L308L CAAACTAGATTTC . 143.0 51.0 130.0 0.0 . 213 . . Atlas-SNP PCDHAC2 56134 hgsc.bcm.edu hg19 5 140348697 140348697 + Silent SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PCDHAC2 NM_031883 exon1 c.A2346G p.R782R AGTTCGAGGGAAT . 146.0 50.0 101.0 0.0 . 142 . . Atlas-SNP PCDHB16 57717 hgsc.bcm.edu hg19 5 140564018 140564018 + Missense_Mutation SNP G G T rs146665935 byfrequency;alternate_allele TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PCDHB16 NM_020957 exon1 c.G1884T p.R628S CGCCAGGCTGCTG . 65.0 18.0 50.0 0.0 . 159 . G|0.999;A|0.001 Atlas-SNP PCDH12 51294 hgsc.bcm.edu hg19 5 141334585 141334585 + Silent SNP G G A rs375930414 TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PCDH12 NM_016580 exon1 c.C2832T p.A944A CCGCTCGGCGAAG . 78.0 22.0 94.0 0.0 . 133 . . Atlas-SNP DPYSL3 1809 hgsc.bcm.edu hg19 5 146780396 146780396 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc DPYSL3,NS,carcinoma,0,1 DPYSL3 NM_001197294 exon10 c.C1311A p.S437R ATCCCCGCTGGCA . 60.0 12.0 45.0 1.0 . 58 . . Atlas-SNP GABRG2 2566 hgsc.bcm.edu hg19 5 161580332 161580332 + Missense_Mutation SNP C C G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . GABRG2 NM_198903 exon11 c.C1506G p.C502W CTTCTGCCTGTTT . 147.0 40.0 120.0 0.0 . 142 . . Atlas-SNP IRF4 3662 hgsc.bcm.edu hg19 6 393256 393256 + Missense_Mutation SNP G G A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . IRF4 NM_001195286 exon2 c.G104A p.G35D ACAGCGGCAAGTA . 260.0 84.0 214.0 0.0 . 65 . . Atlas-SNP PHF1 5252 hgsc.bcm.edu hg19 6 33382581 33382581 + Missense_Mutation SNP C C T rs201507218 bycluster;by1000genomes;alternate_allele TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PHF1 NM_024165 exon11 c.C1024T p.P342S GAGCCCCCTACTG . 73.0 18.0 61.0 0.0 . 42 . C|1.000;G|0.000 Atlas-SNP PTCHD4 442213 hgsc.bcm.edu hg19 6 47976781 47976781 + Missense_Mutation SNP G G C rs375811446 alternate_allele TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . . NM_001013732 exon2 c.C496G p.R166G TGACCCGCTGATC . 100.0 41.0 68.0 0.0 . . . . Atlas-SNP B3GAT2 135152 hgsc.bcm.edu hg19 6 71603943 71603943 + Silent SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . B3GAT2 NM_080742 exon2 c.T624A p.P208P GCCCACAGGCCAG . 238.0 72.0 183.0 0.0 . 33 . . Atlas-SNP PHIP 55023 hgsc.bcm.edu hg19 6 79679818 79679818 + Missense_Mutation SNP C C G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PHIP NM_017934 exon26 c.G3070C p.A1024P GAAAAGCAAGTTT . 120.0 37.0 95.0 0.0 . 177 . . Atlas-SNP COL28A1 340267 hgsc.bcm.edu hg19 7 7412740 7412740 + Missense_Mutation SNP C C G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc COL28A1,colon,carcinoma,0,1 COL28A1 NM_001037763 exon32 c.G2797C p.G933R CCACCCCTATCAC . 152.0 34.0 92.0 1.0 . 113 . . Atlas-SNP NXPH1 30010 hgsc.bcm.edu hg19 7 8791265 8791265 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . NXPH1 NM_152745 exon3 c.T682A p.S228T CATGTATCCTGGC . 345.0 16.0 171.0 0.0 . 42 . . Atlas-SNP BZW2 28969 hgsc.bcm.edu hg19 7 16720989 16720989 + Nonsense_Mutation SNP C C A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . BZW2 NM_014038 exon4 c.C299A p.S100X TGTTTTCAGCAAA . 102.0 28.0 72.0 0.0 . 35 . . Atlas-SNP PDE1C 5137 hgsc.bcm.edu hg19 7 31887658 31887658 + Missense_Mutation SNP A A C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PDE1C NM_001191058 exon10 c.T1084G p.L362V CACTTAAATGGTG . 110.0 18.0 92.0 0.0 . 465 . . Atlas-SNP ZNF679 168417 hgsc.bcm.edu hg19 7 63726440 63726440 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ZNF679 NM_153363 exon5 c.A429T p.E143D TAATGAAGTTAAC . 337.0 79.0 172.0 0.0 . 80 . . Atlas-SNP CD36 948 hgsc.bcm.edu hg19 7 80302699 80302699 + Missense_Mutation SNP A A C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . CD36 NM_001127444 exon11 c.A1228C p.I410L AACTATATTGTGC . 352.0 23.0 141.0 0.0 . 185 . . Atlas-SNP SEMA3A 10371 hgsc.bcm.edu hg19 7 83610774 83610774 + Silent SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SEMA3A NM_006080 exon14 c.A1515G p.S505S AGCCGTTGAACCA . 203.0 9.0 88.0 0.0 . 121 . . Atlas-SNP KIAA1324L 222223 hgsc.bcm.edu hg19 7 86574266 86574266 + Nonsense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . KIAA1324L NM_001142749 exon4 c.T603A p.Y201X GAAGACATAGCCT . 427.0 117.0 269.0 0.0 . 225 . . Atlas-SNP SGCE 8910 hgsc.bcm.edu hg19 7 94259029 94259029 + Splice_Site SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SGCE NM_001099400 exon3 c.232+2T>C . GAACATACCAGGT . 476.0 233.0 256.0 0.0 . 68 . . Atlas-SNP LMTK2 22853 hgsc.bcm.edu hg19 7 97770825 97770825 + Silent SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . LMTK2 NM_014916 exon3 c.A348T p.P116P ACTCCCAGCTCCC . 158.0 27.0 97.0 0.0 . 228 . . Atlas-SNP SLC37A3 84255 hgsc.bcm.edu hg19 7 140055481 140055481 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SLC37A3 NM_207113 exon7 c.A605T p.Q202L CCATACTGAAGAA . 160.0 29.0 64.0 0.0 . 80 . . Atlas-SNP UBE3C 9690 hgsc.bcm.edu hg19 7 156932031 156932031 + Missense_Mutation SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . UBE3C NM_014671 exon1 c.A65G p.K22R GCAGGAAGGTGAG . 44.0 9.0 32.0 0.0 . 124 . . Atlas-SNP NEFM 4741 hgsc.bcm.edu hg19 8 24775019 24775019 + Missense_Mutation SNP G G C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . NEFM NM_005382 exon3 c.G1651C p.G551R GAAGAGGGAGGAT . 179.0 58.0 149.0 0.0 . 115 . . Atlas-SNP ST18 9705 hgsc.bcm.edu hg19 8 53055540 53055540 + Silent SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ST18 NM_014682 exon17 c.A2118T p.P706P AGGGCTTGGTATA . 118.0 42.0 85.0 0.0 . 212 . . Atlas-SNP STAU2 27067 hgsc.bcm.edu hg19 8 74464277 74464277 + Silent SNP C C A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . STAU2 NM_001164380 exon13 c.G1500T p.L500L ATATTCCAGTTGT . 236.0 20.0 163.0 0.0 . 148 . . Atlas-SNP PLEC 5339 hgsc.bcm.edu hg19 8 145001727 145001727 + Missense_Mutation SNP C C T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PLEC NM_201380 exon27 c.G4018A p.E1340K GTTGCTCGAGCTC . 48.0 17.0 26.0 0.0 . 1144 . . Atlas-SNP RFK 55312 hgsc.bcm.edu hg19 9 79002393 79002393 + Silent SNP T T A rs188158713 by1000genomes;alternate_allele TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . RFK NM_018339 exon4 c.A390T p.L130L TAACTCTAGTCGT . 52.0 18.0 34.0 0.0 . 13 . T|1.000;C|0.000 Atlas-SNP DENND1A 57706 hgsc.bcm.edu hg19 9 126439003 126439003 + Missense_Mutation SNP C C A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . DENND1A NM_024820 exon6 c.G368T p.R123I ACCTGTCTTTTTG . 92.0 34.0 60.0 0.0 . 112 . . Atlas-SNP GTF3C5 9328 hgsc.bcm.edu hg19 9 135929323 135929323 + Missense_Mutation SNP A A C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . GTF3C5 NM_012087 exon6 c.A982C p.K328Q GGAATGAAACACG . 135.0 49.0 109.0 0.0 . 46 . . Atlas-SNP ITIH5 80760 hgsc.bcm.edu hg19 10 7627891 7627891 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ITIH5 NM_001001851 exon8 c.T1081A p.Y361N GAATGTACACTTT . 141.0 48.0 103.0 0.0 . 343 . . Atlas-SNP TRDMT1 1787 hgsc.bcm.edu hg19 10 17191063 17191063 + Silent SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . TRDMT1 NM_004412 exon11 c.A1152G p.K384K GATTAGTTTAGCT . 61.0 21.0 52.0 0.0 . 46 . . Atlas-SNP FZD8 8325 hgsc.bcm.edu hg19 10 35930122 35930122 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . FZD8 NM_031866 exon1 c.A236G p.Q79R GAGCACTGGATCT . 86.0 24.0 53.0 0.0 . 41 . . Atlas-SNP GPRIN2 9721 hgsc.bcm.edu hg19 10 46998926 46998926 + Missense_Mutation SNP C C T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . GPRIN2 NM_014696 exon3 c.C46T p.P16S CTGAGCCCCCGCC . 109.0 11.0 104.0 0.0 . 94 . . Atlas-SNP CDH23 64072 hgsc.bcm.edu hg19 10 73560473 73560473 + Silent SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . CDH23 NM_022124 exon51 c.T7443A p.P2481P CAACCCTGGGGAT . 93.0 35.0 69.0 0.0 . 365 . . Atlas-SNP ENTPD7 57089 hgsc.bcm.edu hg19 10 101439111 101439111 + Silent SNP C C G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ENTPD7 NM_020354 exon4 c.C285G p.S95S TGGTTCCCGGATT . 164.0 51.0 126.0 0.0 . 44 . . Atlas-SNP PWWP2B 170394 hgsc.bcm.edu hg19 10 134219298 134219298 + Missense_Mutation SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc PWWP2B,colon,carcinoma,0,1 PWWP2B NM_001098637 exon2 c.A1294G p.R432G GAGGCCAGATCGT . 44.0 16.0 32.0 0.0 . 33 . . Atlas-SNP FUOM 282969 hgsc.bcm.edu hg19 10 135169315 135169315 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . . NM_001098483 exon5 c.A325G p.R109G GGGCTCTCTGGAA . 89.0 32.0 77.0 0.0 . . . . Atlas-SNP PDDC1 347862 hgsc.bcm.edu hg19 11 770992 770992 + Splice_Site SNP C C A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PDDC1 NM_182612 exon8 c.656+1G>T . CCCTCACCGGCTG . 66.0 26.0 60.0 0.0 . 16 . . Atlas-SNP BBOX1 8424 hgsc.bcm.edu hg19 11 27114795 27114795 + Nonsense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . BBOX1 NM_003986 exon5 c.A415T p.K139X GCATACAAGTGGC . 176.0 60.0 145.0 0.0 . 46 . . Atlas-SNP MYBPC3 4607 hgsc.bcm.edu hg19 11 47361216 47361216 + Nonsense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . MYBPC3 NM_000256 exon20 c.A2053T p.K685X TAGCCTTCTGCCA . 82.0 39.0 82.0 0.0 . 102 . . Atlas-SNP GANAB 23193 hgsc.bcm.edu hg19 11 62402314 62402314 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc GANAB,NS,carcinoma,0,1 GANAB NM_198334 exon5 c.A539G p.H180R CTCTGATGCTCAA . 122.0 48.0 87.0 0.0 . 110 . . Atlas-SNP SLC2A3 6515 hgsc.bcm.edu hg19 12 8085600 8085600 + Silent SNP G G A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SLC2A3 NM_006931 exon3 c.C252T p.F84F GTTGACGAAGAGT . 174.0 65.0 114.0 0.0 . 83 . . Atlas-SNP KLRC2 3822 hgsc.bcm.edu hg19 12 10588437 10588437 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . KLRC2 NM_002260 exon1 c.T149A p.L50Q TGATTCAGGGAAG . 115.0 38.0 94.0 0.0 . 29 . . Atlas-SNP GYS2 2998 hgsc.bcm.edu hg19 12 21713357 21713357 + Missense_Mutation SNP C C T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . GYS2 NM_021957 exon8 c.G1132A p.E378K GGGTTTCCACGTT . 81.0 7.0 68.0 0.0 . 110 . . Atlas-SNP HOXC11 3227 hgsc.bcm.edu hg19 12 54367150 54367150 + Missense_Mutation SNP C C A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . HOXC11 NM_014212 exon1 c.C125A p.P42H ACATGCCCGAGTT . 91.0 30.0 60.0 0.0 . 32 . . Atlas-SNP PTPRQ 374462 hgsc.bcm.edu hg19 12 80928788 80928788 + Missense_Mutation SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PTPRQ NM_001145026 exon16 c.A2441G p.Y814C TTTATTACAGAAA . 232.0 67.0 156.0 0.0 . 119 . . Atlas-SNP NUP37 79023 hgsc.bcm.edu hg19 12 102512230 102512230 + Missense_Mutation SNP C C T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc NUP37,NS,carcinoma,0,1 NUP37 NM_024057 exon1 c.G67A p.E23K TAAATTCTACCAC . 109.0 27.0 74.0 0.0 . 26 . . Atlas-SNP PITPNM2 57605 hgsc.bcm.edu hg19 12 123472076 123472076 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PITPNM2 NM_020845 exon21 c.C3245A p.P1082H TTGATAGGGTAGA . 98.0 4.0 79.0 0.0 . 105 . . Atlas-SNP GJB6 10804 hgsc.bcm.edu hg19 13 20797574 20797574 + Missense_Mutation SNP G G A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . GJB6 NM_001110220 exon4 c.C46T p.H16Y TGGAGTGTTTGTT . 116.0 33.0 71.0 0.0 . 33 . . Atlas-SNP SERPINE3 647174 hgsc.bcm.edu hg19 13 51936118 51936118 + Silent SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SERPINE3 NM_001101320 exon7 c.T1260C p.N420N CAAAAATAAGCAT . 192.0 9.0 142.0 0.0 . 37 . . Atlas-SNP ACIN1 22985 hgsc.bcm.edu hg19 14 23548222 23548222 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ACIN1 NM_001164814 exon7 c.A1988G p.D663G CTGCTGTCCCTGG . 94.0 32.0 66.0 0.0 . 147 . . Atlas-SNP PTGR2 145482 hgsc.bcm.edu hg19 14 74343770 74343770 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . PTGR2 NM_152444 exon5 c.T418A p.S140T TTGACTTCCTTGA . 133.0 33.0 94.0 0.0 . 21 . . Atlas-SNP TTLL5 23093 hgsc.bcm.edu hg19 14 76135787 76135787 + Missense_Mutation SNP G G A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . TTLL5 NM_015072 exon3 c.G103A p.G35S ACTGGAGGCTGCA . 122.0 11.0 77.0 0.0 . 102 . . Atlas-SNP TTC7B 145567 hgsc.bcm.edu hg19 14 91044612 91044612 + Silent SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . TTC7B NM_001010854 exon19 c.A2148T p.T716T ACAGGCTGTGGCT . 141.0 48.0 94.0 0.0 . 93 . . Atlas-SNP INO80 54617 hgsc.bcm.edu hg19 15 41313274 41313274 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . INO80 NM_017553 exon26 c.A3098T p.Y1033F CTTTCATATTCTG . 59.0 18.0 57.0 0.0 . 122 . . Atlas-SNP RPAP1 26015 hgsc.bcm.edu hg19 15 41812892 41812892 + Silent SNP C C T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . RPAP1 NM_015540 exon22 c.G3492A p.L1164L GTCCACCAGGAAC . 90.0 29.0 63.0 0.0 . 111 . . Atlas-SNP VPS39 23339 hgsc.bcm.edu hg19 15 42458405 42458405 + Missense_Mutation SNP G G C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc VPS39,NS,carcinoma,0,2 VPS39 NM_015289 exon16 c.C1632G p.F544L GTAGGAGAAAATC . 134.0 45.0 119.0 0.0 . 53 . . Atlas-SNP SEMA6D 80031 hgsc.bcm.edu hg19 15 48055213 48055213 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SEMA6D NM_153617 exon9 c.A659T p.E220V TTTCAGAGCCACA . 47.0 22.0 58.0 0.0 . 322 . . Atlas-SNP SLCO3A1 28232 hgsc.bcm.edu hg19 15 92647605 92647605 + Nonsense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SLCO3A1 NM_013272 exon4 c.T842A p.L281X CCCTCTTGATGTT . 64.0 18.0 50.0 0.0 . 84 . . Atlas-SNP AXIN1 8312 hgsc.bcm.edu hg19 16 347192 347192 + Nonsense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . AXIN1 NM_181050 exon7 c.A1819T p.K607X CCTTCTTGGCATT . 13.0 6.0 14.0 0.0 . 290 . . Atlas-SNP RAB26 25837 hgsc.bcm.edu hg19 16 2203207 2203207 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . RAB26 NM_014353 exon8 c.T652C p.F218L TTGGCCTTCACAG . 141.0 50.0 126.0 0.0 . 9 . . Atlas-SNP USP7 7874 hgsc.bcm.edu hg19 16 8989502 8989502 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . USP7 NM_003470 exon27 c.A2916G p.I972M TACCTCTATTCGA . 92.0 25.0 71.0 0.0 . 116 . . Atlas-SNP MYO1C 4641 hgsc.bcm.edu hg19 17 1384146 1384146 + Missense_Mutation SNP G G C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . MYO1C NM_001080779 exon6 c.C661G p.L221V CCAGGAGGTAACT . 71.0 18.0 48.0 0.0 . 57 . . Atlas-SNP MYH13 8735 hgsc.bcm.edu hg19 17 10216060 10216060 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . MYH13 NM_003802 exon31 c.A4196T p.Q1399L AGCCTCTGGGCCA . 99.0 28.0 56.0 0.0 . 533 . . Atlas-SNP MYO18A 399687 hgsc.bcm.edu hg19 17 27448104 27448104 + Silent SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . MYO18A NM_078471 exon6 c.T1497C p.S499S GCCACTACTGCCC . 62.0 22.0 56.0 0.0 . 217 . . Atlas-SNP ASIC2 40 hgsc.bcm.edu hg19 17 31618817 31618817 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . . NM_183377 exon1 c.A317G p.N106S AAGCGGTTCGAGG . 78.0 23.0 39.0 0.0 . . . . Atlas-SNP KRT32 3882 hgsc.bcm.edu hg19 17 39623382 39623382 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . KRT32 NM_002278 exon1 c.T196A p.Y66N ATAGATAGGTTTT . 124.0 52.0 83.0 0.0 . 57 . . Atlas-SNP KRT15 3866 hgsc.bcm.edu hg19 17 39670928 39670928 + Splice_Site SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . KRT15 NM_002275 exon8 c.1248-2A>T . CCATCCTGAAAGA . 98.0 34.0 94.0 0.0 . 60 . . Atlas-SNP SPATA20 64847 hgsc.bcm.edu hg19 17 48627450 48627450 + Missense_Mutation SNP G G A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SPATA20 NM_022827 exon8 c.G967A p.G323R GCTAACGGGGGCA . 52.0 20.0 42.0 0.0 . 59 . . Atlas-SNP SDK2 54549 hgsc.bcm.edu hg19 17 71429982 71429982 + Missense_Mutation SNP C C T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SDK2 NM_001144952 exon10 c.G1201A p.A401T TAGGGGCGATGCC . 90.0 25.0 72.0 0.0 . 219 . . Atlas-SNP COLEC12 81035 hgsc.bcm.edu hg19 18 335067 335067 + Silent SNP G G A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . COLEC12 NM_130386 exon6 c.C1491T p.G497G TTTGCCGCCACGC . 71.0 32.0 53.0 0.0 . 121 . . Atlas-SNP COLEC12 81035 hgsc.bcm.edu hg19 18 346985 346985 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . COLEC12 NM_130386 exon5 c.C637A p.Q213K GCACCTGGGTCAG . 76.0 26.0 48.0 0.0 . 121 . . Atlas-SNP ANKRD12 23253 hgsc.bcm.edu hg19 18 9255216 9255216 + Missense_Mutation SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ANKRD12 NM_015208 exon9 c.A1951G p.K651E ACATTAAAAAAAC . 397.0 125.0 264.0 0.0 . 167 . . Atlas-SNP MOCOS 55034 hgsc.bcm.edu hg19 18 33846710 33846710 + Splice_Site SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . MOCOS NM_017947 exon14 c.2410-2A>T . CCTGCCAGGTTTT . 91.0 4.0 62.0 0.0 . 84 . . Atlas-SNP HAUS1 115106 hgsc.bcm.edu hg19 18 43703316 43703316 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . HAUS1 NM_138443 exon6 c.G652T p.V218L TCCTTAGTAGCAC . 320.0 86.0 242.0 0.0 . 22 . . Atlas-SNP HMSD 284293 hgsc.bcm.edu hg19 18 61627540 61627540 + Missense_Mutation SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . HMSD NM_001123366 exon4 c.A371G p.N124S TCGATAATATTTT . 158.0 75.0 105.0 0.0 . 16 . . Atlas-SNP BRD4 23476 hgsc.bcm.edu hg19 19 15355195 15355195 + Missense_Mutation SNP G G A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . BRD4 NM_058243 exon13 c.C2428T p.P810S GCTGGGGCTCCAG . 75.0 28.0 56.0 0.0 . 172 . . Atlas-SNP ZNF506 440515 hgsc.bcm.edu hg19 19 19905366 19905366 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ZNF506 NM_001099269 exon4 c.A1330G p.R444G ATTATCTTATGCT . 87.0 25.0 80.0 0.0 . 36 . . Atlas-SNP ZNF714 148206 hgsc.bcm.edu hg19 19 21300669 21300669 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ZNF714 NM_182515 exon5 c.A1199T p.E400V GTGAAGAATGTGG . 58.0 16.0 48.0 0.0 . 121 . . Atlas-SNP CEACAM16 388551 hgsc.bcm.edu hg19 19 45209000 45209000 + Missense_Mutation SNP G G C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . CEACAM16 NM_001039213 exon5 c.G802C p.G268R TTCAACGGGCAGG . 171.0 57.0 119.0 0.0 . 56 . . Atlas-SNP TPRX1 284355 hgsc.bcm.edu hg19 19 48305519 48305519 + Missense_Mutation SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . TPRX1 NM_198479 exon2 c.T749C p.L250P GGGATCAGGCCTG . 93.0 7.0 54.0 0.0 . 46 . . Atlas-SNP TPRX1 284355 hgsc.bcm.edu hg19 19 48305570 48305570 + Missense_Mutation SNP C C A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . TPRX1 NM_198479 exon2 c.G698T p.G233V TTCGGGCCTGAGA . 75.0 6.0 70.0 0.0 . 46 . . Atlas-SNP MYH14 79784 hgsc.bcm.edu hg19 19 50766619 50766619 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . MYH14 NM_001145809 exon22 c.G2636T p.R879L TGCAGCGGAACTG . 117.0 44.0 99.0 0.0 . 261 . . Atlas-SNP KLK7 5650 hgsc.bcm.edu hg19 19 51485634 51485634 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . KLK7 NM_001243126 exon2 c.C149A p.A50D GCAGGGGCAGGAG . 61.0 16.0 42.0 0.0 . 40 . . Atlas-SNP NLRP12 91662 hgsc.bcm.edu hg19 19 54314495 54314495 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . NLRP12 NM_144687 exon3 c.C418T p.R140C CTTCCATGAGCCG . 98.0 31.0 86.0 0.0 . 236 . . Atlas-SNP SLC52A3 113278 hgsc.bcm.edu hg19 20 746252 746252 + Missense_Mutation SNP A A C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . . NM_033409 exon2 c.T167G p.L56R ACCAGGAGGGGCC . 211.0 134.0 83.0 0.0 . . . . Atlas-SNP NKX2-4 644524 hgsc.bcm.edu hg19 20 21377078 21377078 + Missense_Mutation SNP A A C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . NKX2-4 NM_033176 exon2 c.T536G p.L179R GCGTGCAGCGGGC . 78.0 39.0 38.0 0.0 . 7 . . Atlas-SNP COX4I2 84701 hgsc.bcm.edu hg19 20 30227900 30227900 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . COX4I2 NM_032609 exon3 c.T247A p.L83M GTGGCCTGTAAGT . 1684.0 344.0 873.0 0.0 . 18 . . Atlas-SNP TOP1 7150 hgsc.bcm.edu hg19 20 39709835 39709835 + Silent SNP A A G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . TOP1 NM_003286 exon7 c.A462G p.T154T TAAAACAGAAGAT . 498.0 84.0 175.0 0.0 . 71 . . Atlas-SNP SYCP2 10388 hgsc.bcm.edu hg19 20 58468254 58468254 + Missense_Mutation SNP C C G novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SYCP2 NM_014258 exon21 c.G1736C p.S579T AGTTCACCTAAAT . 91.0 5.0 43.0 0.0 . 204 . . Atlas-SNP BAGE3 85318 hgsc.bcm.edu hg19 21 11058295 11058295 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . . NM_182481 exon3 c.C145A p.P49T ATAGTGGCTCCAA . 334.0 18.0 281.0 0.0 . . . . Atlas-SNP TMPRSS15 5651 hgsc.bcm.edu hg19 21 19666622 19666622 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . TMPRSS15 NM_002772 exon21 c.T2451A p.S817R CCAGTCACTGCTG . 85.0 31.0 75.0 0.0 . 189 . . Atlas-SNP SMARCB1 6598 hgsc.bcm.edu hg19 22 24135767 24135767 + Missense_Mutation SNP C C A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SMARCB1 NM_003073 exon3 c.C254A p.A85D CTCTAGCCACCAG . 73.0 38.0 87.0 0.0 . 586 . . Atlas-SNP NF2 4771 hgsc.bcm.edu hg19 22 30035159 30035159 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . NF2 NM_000268 exon3 c.G321T p.E107D TGAAGAGGAGCTG . 80.0 47.0 81.0 0.0 . 1312 . . Atlas-SNP NF2 4771 hgsc.bcm.edu hg19 22 30035160 30035160 + Nonsense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . NF2 NM_000268 exon3 c.G322T p.E108X GAAGAGGAGCTGG . 77.0 46.0 79.0 0.0 . 1312 . . Atlas-SNP WNT7B 7477 hgsc.bcm.edu hg19 22 46327010 46327010 + Missense_Mutation SNP T T A rs200797257 by1000genomes;alternate_allele TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . WNT7B NM_058238 exon3 c.A538T p.M180L GGTTCATGAGGCG . 12.0 7.0 19.0 0.0 . 45 . T|1.000;C|0.000 Atlas-SNP IQSEC2 23096 hgsc.bcm.edu hg19 X 53272572 53272572 + Missense_Mutation SNP T T A novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . IQSEC2 NM_001111125 exon9 c.A2831T p.N944I TCATCGTTGGTCC . 66.0 50.0 46.0 0.0 . 195 . . Atlas-SNP EDA 1896 hgsc.bcm.edu hg19 X 69255445 69255445 + Missense_Mutation SNP G G T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . EDA NM_001399 exon8 c.G1162T p.A388S GGTGAAGCCCCTG . 66.0 39.0 53.0 0.0 . 61 . . Atlas-SNP ATG4A 115201 hgsc.bcm.edu hg19 X 107381369 107381369 + Missense_Mutation SNP A A T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ATG4A NM_052936 exon9 c.A762T p.L254F GTCTTTAGGGGCA . 198.0 54.0 125.0 0.0 . 68 . . Atlas-SNP MCF2 4168 hgsc.bcm.edu hg19 X 138733894 138733894 + Missense_Mutation SNP T T C novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . MCF2 NM_001171876 exon2 c.A10G p.I4V AGGCGATGTCTTG . 429.0 313.0 317.0 2.0 . 432 . . Atlas-SNP ARL13B 200894 hgsc.bcm.edu hg19 3 93755562 93755562 + Frame_Shift_Del DEL A A - novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ARL13B NM_001174150 exon5 c.652delG p.E218fs . . 486.0 166.0 341.0 0.0 . 52 . . Atlas-INDEL A2ML1 144568 hgsc.bcm.edu hg19 12 8998818 8998818 + Frame_Shift_Del DEL G G - novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . A2ML1 NM_144670 exon14 c.1682delA p.Q561fs . . 132.0 47.0 100.0 0.0 . 199 . . Atlas-INDEL KIAA1199 57214 hgsc.bcm.edu hg19 15 81225646 81225646 + Frame_Shift_Del DEL G G - novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . KIAA1199 NM_018689 exon22 c.2853delT p.D951fs . . 156.0 41.0 128.0 0.0 . 118 . . Atlas-INDEL DHX35 60625 hgsc.bcm.edu hg19 20 37597805 37597806 + Frame_Shift_Ins INS - - T novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . DHX35 NM_021931 exon2 c.122_123insT p.P41fs . . 156.0 23.0 82.0 0.0 . 82 . . Atlas-INDEL ZBTB44 29068 hgsc.bcm.edu hg19 11 130131553 130131587 + Frame_Shift_Del DEL CAACACATTCTTGTTCTCATCCTCGGCTTGGCCTA CAACACATTCTTGTTCTCATCCTCGGCTTGGCCTA - novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 CAACACATTCTTGTTCTCATCCTCGGCTTGGCCTA CAACACATTCTTGTTCTCATCCTCGGCTTGGCCTA . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . ZBTB44 NM_014155 exon2 c.183_217del p.61_73del . . 142.0 12.0 111.0 0.0 . 41 . . Atlas-INDEL KIAA0947 23379 hgsc.bcm.edu hg19 5 5462373 5462374 + Frame_Shift_Ins INS - - CA novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . KIAA0947 NM_015325 exon13 c.2926_2927insCA p.A976fs . . 128.0 39.0 103.0 0.0 . 301 . . Atlas-INDEL SLC6A13 6540 hgsc.bcm.edu hg19 12 351921 351936 + Frame_Shift_Del DEL CTGCGGGGAAACTGCA CTGCGGGGAAACTGCA - novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 CTGCGGGGAAACTGCA CTGCGGGGAAACTGCA . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . SLC6A13 NM_016615 exon4 c.338_338del p.113_113del . . 58.0 19.0 54.0 0.0 . 62 . . Atlas-INDEL FRYL 285527 hgsc.bcm.edu hg19 4 48542570 48542570 + Frame_Shift_Del DEL T T - novel TCGA-DD-AADS-01A-11D-A40R-10 TCGA-DD-AADS-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 7d7b0cb1-f476-4c50-91ab-d79564809fb8 7d48f285-d87c-41ed-881c-9dd20e9953dc . FRYL NM_015030 exon46 c.6096delT p.H2032fs . . 149.0 50.0 135.0 0.0 . 242 . . Atlas-INDEL