Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq dbSNP_AF Algorithm TAS1R1 80835 hgsc.bcm.edu hg19 1 6631122 6631122 + Silent SNP G G A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . TAS1R1 NM_177540 exon2 c.G345A p.T115T TGCCACGCTGAGA . 56.0 41.0 111.0 0.0 . 76 . . Atlas-SNP NFYC 4802 hgsc.bcm.edu hg19 1 41215315 41215315 + Missense_Mutation SNP G G C novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . NFYC NM_001142587 exon4 c.G248C p.R83P CTCTTCGAGCCTG . 77.0 52.0 85.0 0.0 . 39 . . Atlas-SNP ZNF648 127665 hgsc.bcm.edu hg19 1 182025619 182025619 + Silent SNP G G A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . ZNF648 NM_001009992 exon2 c.C1527T p.C509C CCTGCCGCACTCG . 214.0 127.0 118.0 0.0 . 111 . . Atlas-SNP UCHL5 51377 hgsc.bcm.edu hg19 1 192992059 192992059 + Nonsense_Mutation SNP G G T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . UCHL5 NM_015984 exon9 c.C843A p.Y281X TACCTTGTATCTT . 141.0 8.0 84.0 0.0 . 41 . . Atlas-SNP OR2L5 81466 hgsc.bcm.edu hg19 1 248185504 248185504 + Silent SNP G G C novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . . NM_001258284 exon1 c.G255C p.L85L TTTTCTGTATGGA . 170.0 106.0 63.0 0.0 . . . . Atlas-SNP PTCD3 55037 hgsc.bcm.edu hg19 2 86362000 86362000 + Missense_Mutation SNP A A C novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . PTCD3 NM_017952 exon21 c.A1668C p.K556N TATCAAATCTGCG . 267.0 108.0 212.0 0.0 . 51 . . Atlas-SNP TTN 7273 hgsc.bcm.edu hg19 2 179647562 179647562 + Missense_Mutation SNP A A G novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . TTN NM_001267550 exon18 c.T3071C p.V1024A GTGCTGACGGTTC . 150.0 58.0 105.0 0.0 . 18412 . . Atlas-SNP TRIP12 9320 hgsc.bcm.edu hg19 2 230655847 230655847 + Silent SNP T T C novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . TRIP12 NM_004238 exon29 c.A4311G p.L1437L GTGCCATAACTCA . 132.0 57.0 97.0 0.0 . 207 . . Atlas-SNP OSBPL10 114884 hgsc.bcm.edu hg19 3 32022658 32022658 + Missense_Mutation SNP A A G novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . OSBPL10 NM_017784 exon1 c.T14C p.V5A CCCTGGACTGCCC . 44.0 13.0 30.0 0.0 . 160 . . Atlas-SNP COL7A1 1294 hgsc.bcm.edu hg19 3 48630101 48630101 + Missense_Mutation SNP C C A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . COL7A1 NM_000094 exon7 c.G878T p.R293L CGCAGCCGCACAC . 42.0 24.0 45.0 0.0 . 320 . . Atlas-SNP COL6A6 131873 hgsc.bcm.edu hg19 3 130284086 130284086 + Missense_Mutation SNP G G T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . COL6A6 NM_001102608 exon3 c.G910T p.G304W CGAACTGGGAAGG . 187.0 69.0 152.0 0.0 . 497 . . Atlas-SNP FNDC3B 64778 hgsc.bcm.edu hg19 3 172052790 172052790 + Silent SNP G G T rs139505585 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . FNDC3B NM_001135095 exon15 c.G1698T p.T566T TTGTACGACGAGT . 238.0 66.0 136.0 0.0 . 118 . G|0.998;A|0.002 Atlas-SNP ZNF639 51193 hgsc.bcm.edu hg19 3 179047483 179047483 + Nonsense_Mutation SNP A A T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . ZNF639 NM_016331 exon5 c.A136T p.R46X TCTATGAGACAGC . 537.0 148.0 305.0 0.0 . 45 . . Atlas-SNP ADIPOQ 9370 hgsc.bcm.edu hg19 3 186570987 186570987 + Missense_Mutation SNP C C T rs372597136 TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . ADIPOQ NM_001177800 exon3 c.C140T p.P47L GGCATCCGGGCCA . 598.0 176.0 320.0 0.0 . 35 . . Atlas-SNP FRYL 285527 hgsc.bcm.edu hg19 4 48581248 48581248 + Missense_Mutation SNP A A T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . FRYL NM_015030 exon23 c.T2270A p.L757H CAATAGAGCAAAG . 101.0 48.0 99.0 0.0 . 242 . . Atlas-SNP PIK3R1 5295 hgsc.bcm.edu hg19 5 67590433 67590433 + Nonsense_Mutation SNP C C T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . PIK3R1 NM_181523 exon12 c.C1495T p.Q499X CAGTGCCAGACCC . 143.0 57.0 126.0 0.0 . 869 . . Atlas-SNP RAPGEF6 51735 hgsc.bcm.edu hg19 5 130778197 130778197 + Missense_Mutation SNP T T G novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . RAPGEF6 NM_001164387 exon25 c.A3494C p.K1165T GATGATTTGGCTG . 117.0 47.0 97.0 0.0 . 361 . . Atlas-SNP PHACTR2 9749 hgsc.bcm.edu hg19 6 144095324 144095324 + Nonsense_Mutation SNP C C T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . PHACTR2 NM_001100164 exon8 c.C1561T p.R521X GAAATCCGACAAC . 103.0 84.0 149.0 0.0 . 99 . . Atlas-SNP LPA 4018 hgsc.bcm.edu hg19 6 160966486 160966486 + Missense_Mutation SNP T T C novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 LPA,NS,carcinoma,0,2 LPA NM_005577 exon34 c.A5384G p.D1795G GGGATATCACAGT . 48.0 39.0 47.0 0.0 . 237 . . Atlas-SNP HOXA11 3207 hgsc.bcm.edu hg19 7 27224475 27224475 + Missense_Mutation SNP G G C novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . HOXA11 NM_005523 exon1 c.C289G p.P97A CGCTGGGCGCCTG . 56.0 8.0 41.0 0.0 . 29 . . Atlas-SNP LAMB4 22798 hgsc.bcm.edu hg19 7 107706863 107706863 + Missense_Mutation SNP C C A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . LAMB4 NM_007356 exon20 c.G2629T p.G877W ATGACCCTGTCTC . 200.0 88.0 136.0 0.0 . 253 . . Atlas-SNP PDLIM2 64236 hgsc.bcm.edu hg19 8 22451394 22451394 + Missense_Mutation SNP G G T rs200868327 bycluster;alternate_allele TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 PDLIM2_ENST00000308354,NS,carcinoma,0,1 PDLIM2 NM_021630 exon10 c.G1780T p.A594S TACTCCGCACCTG . 60.0 27.0 40.0 1.0 . 42 . . Atlas-SNP SMARCA2 6595 hgsc.bcm.edu hg19 9 2101571 2101571 + Missense_Mutation SNP A A C novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . SMARCA2 NM_139045 exon22 c.A3080C p.E1027A TAAAGGAATCCTT . 445.0 322.0 694.0 0.0 . 313 . . Atlas-SNP GNAQ 2776 hgsc.bcm.edu hg19 9 80537112 80537112 + Missense_Mutation SNP T T A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 GNAQ,NS,carcinoma,0,2 GNAQ NM_002072 exon2 c.A286T p.T96S TGAGTGTGTCCAT . 57.0 4.0 50.0 1.0 . 384 . . Atlas-SNP ASPN 54829 hgsc.bcm.edu hg19 9 95237030 95237030 + Missense_Mutation SNP A A C rs143279922 bycluster TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . ASPN NM_001193335 exon2 c.T150G p.D50E CTCATCATCATCA . 112.0 7.0 65.0 0.0 . 52 . . Atlas-SNP UBAC1 10422 hgsc.bcm.edu hg19 9 138838155 138838155 + Silent SNP C C A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . UBAC1 NM_016172 exon5 c.G504T p.A168A GTTCAGCGCTAAC . 129.0 53.0 83.0 0.0 . 40 . . Atlas-SNP C10orf137 26098 hgsc.bcm.edu hg19 10 127451995 127451995 + Missense_Mutation SNP G G T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . C10orf137 NM_001202438 exon25 c.G3671T p.G1224V TGCTGGGCCAGCT . 46.0 21.0 26.0 0.0 . 153 . . Atlas-SNP MUC2 4583 hgsc.bcm.edu hg19 11 1092885 1092885 + Silent SNP G G A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 MUC2_ENST00000441003,NS,carcinoma,+1,2 MUC2 NM_002457 exon30 c.G4704A p.T1568T CACCACGGTGACC . 49.0 6.0 33.0 0.0 . 614 . . Atlas-SNP CRY2 1408 hgsc.bcm.edu hg19 11 45882443 45882443 + Missense_Mutation SNP G G T rs369560580 alternate_allele TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . CRY2 NM_021117 exon4 c.G575T p.R192L ACAAGCGCTTTCA . 89.0 39.0 66.0 0.0 . 61 . . Atlas-SNP C11orf80 79703 hgsc.bcm.edu hg19 11 66563768 66563768 + Missense_Mutation SNP G G A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . C11orf80 NM_024650 exon6 c.G650A p.R217K AGCCCAGAACCTT . 195.0 82.0 137.0 0.0 . 31 . . Atlas-SNP ENDOD1 23052 hgsc.bcm.edu hg19 11 94823356 94823356 + Missense_Mutation SNP G G T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . ENDOD1 NM_015036 exon1 c.G265T p.G89C GCGCCCGGCGGCG . 93.0 36.0 55.0 0.0 . 26 . . Atlas-SNP CCDC168 643677 hgsc.bcm.edu hg19 13 103382043 103382043 + Missense_Mutation SNP C C T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . . NM_001146197 exon4 c.G21004A p.D7002N TGATATCGTCATG . 249.0 117.0 199.0 0.0 . . . . Atlas-SNP HECTD1 25831 hgsc.bcm.edu hg19 14 31642418 31642418 + Missense_Mutation SNP A A G novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . HECTD1 NM_015382 exon6 c.T1100C p.I367T CAATCTATAAGCT . 207.0 76.0 169.0 0.0 . 159 . . Atlas-SNP ABHD12B 145447 hgsc.bcm.edu hg19 14 51352570 51352570 + Missense_Mutation SNP G G A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 ABHD12B,NS,carcinoma,0,1 ABHD12B NM_001206673 exon7 c.G619A p.G207S AGAAGTGGCATCA . 162.0 66.0 124.0 0.0 . 53 . . Atlas-SNP WDR25 79446 hgsc.bcm.edu hg19 14 100995511 100995511 + Missense_Mutation SNP G G A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . WDR25 NM_001161476 exon6 c.G1379A p.R460Q CCTACCGGATGAG . 89.0 36.0 90.0 0.0 . 37 . . Atlas-SNP CYFIP1 23191 hgsc.bcm.edu hg19 15 22960851 22960851 + Missense_Mutation SNP T T A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . CYFIP1 NM_014608 exon18 c.T2044A p.F682I ACCAGGTTCAACA . 87.0 32.0 67.0 0.0 . 159 . . Atlas-SNP ABCC6 368 hgsc.bcm.edu hg19 16 16244619 16244619 + Missense_Mutation SNP T T C novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . ABCC6 NM_001171 exon30 c.A4219G p.K1407E GCTGTTTCTGGCC . 134.0 109.0 169.0 0.0 . 110 . . Atlas-SNP MED1 5469 hgsc.bcm.edu hg19 17 37566444 37566444 + Missense_Mutation SNP C C T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 MED1,colon,carcinoma,0,2 MED1 NM_004774 exon17 c.G2030A p.R677H TCCATGCGGGGTG . 132.0 62.0 75.0 0.0 . 123 . . Atlas-SNP RNF213 57674 hgsc.bcm.edu hg19 17 78327346 78327346 + Silent SNP G G A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . RNF213 NM_001256071 exon34 c.G10458A p.E3486E CCATGAGGAGGCG . 165.0 67.0 159.0 0.0 . 766 . . Atlas-SNP PAK4 10298 hgsc.bcm.edu hg19 19 39668341 39668341 + Missense_Mutation SNP G G T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . PAK4 NM_001014832 exon8 c.G1512T p.M504I GATAATGGTGATT . 215.0 72.0 156.0 0.0 . 40 . . Atlas-SNP ZNF222 7673 hgsc.bcm.edu hg19 19 44535978 44535978 + Missense_Mutation SNP A A T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . ZNF222 NM_001129996 exon4 c.A271T p.I91F GGCAAGATCCAAA . 360.0 104.0 220.0 0.0 . 90 . . Atlas-SNP C20orf26 26074 hgsc.bcm.edu hg19 20 20340921 20340921 + Missense_Mutation SNP A A G novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . C20orf26 NM_015585 exon27 c.A3581G p.E1194G CGACTGAGAAGCC . 195.0 77.0 146.0 0.0 . 188 . . Atlas-SNP SOGA1 140710 hgsc.bcm.edu hg19 20 35443555 35443555 + Missense_Mutation SNP C C T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . SOGA1 NM_080627 exon5 c.G2290A p.A764T CTTTTGCCAGAAG . 146.0 68.0 94.0 0.0 . 136 . . Atlas-SNP TIAM1 7074 hgsc.bcm.edu hg19 21 32492952 32492952 + Missense_Mutation SNP T T C novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . TIAM1 NM_003253 exon29 c.A4510G p.I1504V TGAGGATGTCTGT . 78.0 34.0 57.0 0.0 . 522 . . Atlas-SNP MAPK1 5594 hgsc.bcm.edu hg19 22 22160239 22160239 + Missense_Mutation SNP T T C novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . MAPK1 NM_002745 exon3 c.A392G p.Y131C ATCTGGTAGAGAA . 174.0 69.0 124.0 0.0 . 38 . . Atlas-SNP NEFH 4744 hgsc.bcm.edu hg19 22 29885876 29885876 + Silent SNP G G A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . NEFH NM_021076 exon4 c.G2247A p.K749K AGAGAAGGCCAAG . 141.0 18.0 6.0 0.0 . 178 . . Atlas-SNP TTLL1 25809 hgsc.bcm.edu hg19 22 43464505 43464505 + Silent SNP C C T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . TTLL1 NM_012263 exon5 c.G414A p.K138K ACAAGGCTTCATG . 117.0 35.0 118.0 0.0 . 41 . . Atlas-SNP MAGEB4 4115 hgsc.bcm.edu hg19 X 30261048 30261048 + Missense_Mutation SNP C C A novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . MAGEB4 NM_002367 exon1 c.C796A p.P266T GATCCCCCACGCT . 158.0 135.0 117.0 0.0 . 75 . . Atlas-SNP NLGN1 22871 hgsc.bcm.edu hg19 3 173996654 173996654 + Frame_Shift_Del DEL T T - novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . NLGN1 NM_014932 exon6 c.862delC p.L288fs . . 54.0 17.0 40.0 0.0 . 209 . . Atlas-INDEL ATP10B 23120 hgsc.bcm.edu hg19 5 160047635 160047644 + Frame_Shift_Del DEL CTGGCCAGGT CTGGCCAGGT - novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 CTGGCCAGGT CTGGCCAGGT . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . ATP10B NM_025153 exon15 c.2127_2136del p.709_712del . . 97.0 39.0 63.0 0.0 . 201 . . Atlas-INDEL ZNF227 7770 hgsc.bcm.edu hg19 19 44739013 44739014 + Frame_Shift_Ins INS - - T novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . ZNF227 NM_182490 exon6 c.430_431insT p.I144fs . . 733.0 196.0 397.0 0.0 . 62 . . Atlas-INDEL PTDSS1 9791 hgsc.bcm.edu hg19 8 97332514 97332514 + Frame_Shift_Del DEL G G - novel TCGA-DD-AACW-01A-11D-A40R-10 TCGA-DD-AACW-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 990f7ea9-6799-410e-b224-27e27a625fb7 5dcdade5-76ff-4909-8133-c9f73a19baf7 . PTDSS1 NM_014754 exon10 c.1113delT p.F371fs . . 163.0 67.0 144.0 0.0 . 70 . . Atlas-INDEL