Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	dbSNP_AF	Algorithm
TRMT13	54482	hgsc.bcm.edu	hg19	1	100602441	100602441	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	.	NM_019083	exon2	c.G151A	p.E51K	TAGGAAGAAGATG	.	190.0	12.0	123.0	0.0	.	.	.	.	Atlas-SNP
OBSCN	84033	hgsc.bcm.edu	hg19	1	228527773	228527773	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	OBSCN	NM_001271223	exon81	c.G20257A	p.V6753I	GTGGTCGTCAGCA	.	89.0	4.0	61.0	0.0	.	2142	.	.	Atlas-SNP
FSHR	2492	hgsc.bcm.edu	hg19	2	49295430	49295430	+	Splice_Site	SNP	C	C	T	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	FSHR,NS,carcinoma,0,1	FSHR	NM_181446	exon3	c.153-1G>A	.	AACCTCCTGCAAA	.	74.0	11.0	50.0	0.0	.	164	.	.	Atlas-SNP
HK2	3099	hgsc.bcm.edu	hg19	2	75109363	75109363	+	Silent	SNP	C	C	T	rs200225889	bycluster	TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	HK2,NS,carcinoma,0,1	HK2	NM_000189	exon12	c.C1836T	p.D612D	CCTGGACGAGGTA	.	132.0	13.0	104.0	0.0	.	85	.	C|0.999;T|0.001	Atlas-SNP
NDUFB3	4709	hgsc.bcm.edu	hg19	2	201943675	201943675	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	NDUFB3	NM_001257102	exon3	c.A70G	p.I24V	TGGAAGATAGAAG	.	290.0	24.0	225.0	0.0	.	5	.	.	Atlas-SNP
SEL1L3	23231	hgsc.bcm.edu	hg19	4	25849364	25849364	+	Missense_Mutation	SNP	G	G	T	rs371579636	alternate_allele	TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	SEL1L3	NM_015187	exon2	c.C285A	p.N95K	AGAAACGTTGCGA	.	176.0	30.0	148.0	0.0	.	62	.	.	Atlas-SNP
GZMA	3001	hgsc.bcm.edu	hg19	5	54404222	54404222	+	Silent	SNP	T	T	C	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	GZMA	NM_006144	exon4	c.T627C	p.N209N	GTGCAATGTAAGT	.	143.0	20.0	106.0	0.0	.	60	.	.	Atlas-SNP
C6orf62	81688	hgsc.bcm.edu	hg19	6	24718778	24718778	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	C6orf62	NM_030939	exon1	c.T119G	p.F40C	TCCTTGAATACAA	.	127.0	16.0	109.0	0.0	.	18	.	.	Atlas-SNP
TIGD3	220359	hgsc.bcm.edu	hg19	11	65124527	65124527	+	Silent	SNP	C	C	T	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	TIGD3	NM_145719	exon2	c.C1248T	p.D416D	TGAAGACGAGAAG	.	111.0	9.0	87.0	0.0	.	32	.	.	Atlas-SNP
DDX47	51202	hgsc.bcm.edu	hg19	12	12974309	12974309	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	DDX47	NM_201224	exon3	c.T349G	p.S117A	CTGGGGTCCTCTA	.	101.0	18.0	63.0	0.0	.	37	.	.	Atlas-SNP
MTA1	9112	hgsc.bcm.edu	hg19	14	105929876	105929876	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	MTA1	NM_004689	exon12	c.A1064G	p.Y355C	AAGTTTATATTCC	.	115.0	12.0	99.0	0.0	.	61	.	.	Atlas-SNP
SMARCD2	6603	hgsc.bcm.edu	hg19	17	61911595	61911595	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	SMARCD2	NM_001098426	exon8	c.A1015G	p.I339V	GCTTGATGTAAAG	.	119.0	21.0	102.0	0.0	.	29	.	.	Atlas-SNP
RNF213	57674	hgsc.bcm.edu	hg19	17	78363961	78363961	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	RNF213	NM_001256071	exon67	c.A15435C	p.Q5145H	CCCCCAAACCCAA	.	158.0	23.0	122.0	0.0	.	766	.	.	Atlas-SNP
FANCB	2187	hgsc.bcm.edu	hg19	X	14862009	14862009	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	FANCB	NM_152633	exon9	c.T2260A	p.F754I	TTAGGAAATTCTC	.	44.0	6.0	29.0	0.0	.	78	.	.	Atlas-SNP
ND4	0	hgsc.bcm.edu	hg19	MT	11087	11087	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	.	ENST00000361381	exon1	c.T328C	p.F110L	ATAACATTCACAG	.	26.0	16.0	28.0	0.0	.	.	.	.	Atlas-SNP
ND5	0	hgsc.bcm.edu	hg19	MT	13976	13976	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A9FV-01A-11D-A36X-10	TCGA-CC-A9FV-10A-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ee96f017-533b-4dfc-bd2a-bac5a8e505ab	e96de230-4a53-4be9-8595-1da88b23b989	.	.	ENST00000361567	exon1	c.A1640C	p.N547T	GCCAAAACCTGCC	.	33.0	9.0	49.0	0.0	.	.	.	.	Atlas-SNP