Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	dbSNP_AF	Algorithm
COL16A1	1307	hgsc.bcm.edu	hg19	1	32162651	32162651	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	COL16A1	NM_001856	exon8	c.G777C	p.Q259H	ATTGCTCTGGGTG	.	305.0	136.0	273.0	0.0	.	137	.	.	Atlas-SNP
BAI2	576	hgsc.bcm.edu	hg19	1	32196897	32196897	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	BAI2	NM_001703	exon29	c.T3884A	p.F1295Y	GGTGAGAAGCTGA	.	175.0	85.0	163.0	0.0	.	128	.	.	Atlas-SNP
LHX8	431707	hgsc.bcm.edu	hg19	1	75602325	75602325	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	LHX8	NM_001001933	exon3	c.C56T	p.T19I	GGACTACAGCCCT	.	73.0	34.0	74.0	0.0	.	73	.	.	Atlas-SNP
POGZ	23126	hgsc.bcm.edu	hg19	1	151414583	151414583	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	POGZ	NM_145796	exon2	c.A98G	p.Y33C	GAATTATAATCTT	.	265.0	87.0	207.0	0.0	.	211	.	.	Atlas-SNP
USH2A	7399	hgsc.bcm.edu	hg19	1	216496858	216496858	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	USH2A,NS,carcinoma,0,1	USH2A	NM_007123	exon8	c.G1508A	p.R503K	CTGTGTCTGAGGT	.	359.0	104.0	217.0	1.0	.	1168	.	.	Atlas-SNP
SNTG2	54221	hgsc.bcm.edu	hg19	2	1079315	1079315	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	SNTG2	NM_018968	exon2	c.G184T	p.V62L	GTCTGTGTGGGCG	.	90.0	36.0	110.0	0.0	.	125	.	.	Atlas-SNP
PIGF	5281	hgsc.bcm.edu	hg19	2	46839477	46839477	+	Silent	SNP	T	T	A	rs1824050	bycluster;byfrequency;by2hit2allele;by1000genomes;alternate_allele	TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	PIGF	NM_002643	exon4	c.A327T	p.A109A	TTCCAATGCCAAC	.	323.0	152.0	502.0	2.0	.	9	.	T|0.798;C|0.202	Atlas-SNP
VRK2	7444	hgsc.bcm.edu	hg19	2	58373591	58373591	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	VRK2	NM_001130480	exon12	c.G1164C	p.M388I	ATTGATGAACAAT	.	343.0	145.0	402.0	0.0	.	46	.	.	Atlas-SNP
CTNNA2	1496	hgsc.bcm.edu	hg19	2	80085161	80085161	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	CTNNA2	NM_001164883	exon4	c.C321T	p.S107S	CGCCTCCTCCGAG	.	128.0	52.0	136.0	0.0	.	462	.	.	Atlas-SNP
DPP10	57628	hgsc.bcm.edu	hg19	2	116510776	116510776	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	DPP10	NM_001178034	exon11	c.G989T	p.W330L	TTAAATGGGTAAG	.	196.0	73.0	299.0	0.0	.	415	.	.	Atlas-SNP
ZNF445	353274	hgsc.bcm.edu	hg19	3	44489484	44489484	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	ZNF445	NM_181489	exon8	c.G1679T	p.R560L	GTTTCTCGGTGCA	.	92.0	12.0	114.0	0.0	.	91	.	.	Atlas-SNP
UPK1B	7348	hgsc.bcm.edu	hg19	3	118909118	118909118	+	Nonsense_Mutation	SNP	T	T	A	rs113148509	alternate_allele	TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	UPK1B	NM_006952	exon4	c.T297A	p.Y99X	AGTATATGCCTTT	.	443.0	178.0	523.0	0.0	.	27	.	T|0.500;C|0.500	Atlas-SNP
RHO	6010	hgsc.bcm.edu	hg19	3	129252455	129252455	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	RHO	NM_000539	exon5	c.G941A	p.R314Q	AGTTCCGGAACTG	.	68.0	33.0	33.0	0.0	.	57	.	.	Atlas-SNP
UGT2B15	7366	hgsc.bcm.edu	hg19	4	69535667	69535667	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	UGT2B15	NM_001076	exon1	c.T670C	p.W224R	GAAACCAAAAGTC	.	184.0	147.0	429.0	2.0	.	48	.	.	Atlas-SNP
NIPAL4	348938	hgsc.bcm.edu	hg19	5	156899886	156899886	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	NIPAL4	NM_001099287	exon6	c.A1319G	p.K440R	AAGACAAGAACGT	.	82.0	34.0	80.0	0.0	.	48	.	.	Atlas-SNP
SLIT3	6586	hgsc.bcm.edu	hg19	5	168119629	168119629	+	Silent	SNP	G	G	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	SLIT3	NM_001271946	exon29	c.C3180T	p.P1060P	GTCCAGGGGGATG	.	90.0	9.0	73.0	0.0	.	224	.	.	Atlas-SNP
SERPINB6	5269	hgsc.bcm.edu	hg19	6	2959566	2959566	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	SERPINB6	NM_001271823	exon2	c.A58G	p.M20V	CATCCATGATGGC	.	155.0	65.0	130.0	0.0	.	31	.	.	Atlas-SNP
PDGFA	5154	hgsc.bcm.edu	hg19	7	550578	550578	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	PDGFA	NM_002607	exon4	c.G321A	p.R107R	CTGACTCCGAGGA	.	137.0	63.0	93.0	0.0	.	34	.	.	Atlas-SNP
PCLO	27445	hgsc.bcm.edu	hg19	7	82464992	82464992	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	PCLO	NM_014510	exon16	c.A14240G	p.Q4747R	GCATTCTGGACAA	.	180.0	84.0	162.0	0.0	.	1506	.	.	Atlas-SNP
LAMB4	22798	hgsc.bcm.edu	hg19	7	107688358	107688358	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	LAMB4	NM_007356	exon28	c.A4321G	p.N1441D	CCTGATTTTTCAA	.	354.0	168.0	374.0	0.0	.	253	.	.	Atlas-SNP
NRCAM	4897	hgsc.bcm.edu	hg19	7	107866734	107866734	+	Silent	SNP	G	G	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	NRCAM	NM_001037132	exon6	c.C639T	p.R213R	GTCTTCGCGGGTG	.	47.0	21.0	62.0	0.0	.	267	.	.	Atlas-SNP
MLL3	58508	hgsc.bcm.edu	hg19	7	151873592	151873592	+	Silent	SNP	A	A	C	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	MLL3	NM_170606	exon38	c.T8946G	p.V2982V	AGAAAAAACATGG	.	187.0	76.0	191.0	0.0	.	1564	.	.	Atlas-SNP
ZHX2	22882	hgsc.bcm.edu	hg19	8	123965265	123965265	+	Silent	SNP	C	C	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	ZHX2	NM_014943	exon3	c.C1515A	p.S505S	CGAATCCCTTGCC	.	40.0	17.0	31.0	0.0	.	106	.	.	Atlas-SNP
TRPM6	140803	hgsc.bcm.edu	hg19	9	77416900	77416900	+	Silent	SNP	C	C	T	rs372508531		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	TRPM6	NM_017662	exon16	c.G1923A	p.A641A	GATACACGCAATC	.	192.0	84.0	168.0	0.0	.	377	.	.	Atlas-SNP
PTCH1	5727	hgsc.bcm.edu	hg19	9	98268744	98268744	+	Silent	SNP	C	C	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	PTCH1	NM_000264	exon2	c.G339T	p.A113A	TCCCACCGCGAAG	.	200.0	90.0	181.0	0.0	.	1850	.	.	Atlas-SNP
GPSM1	26086	hgsc.bcm.edu	hg19	9	139234260	139234260	+	Silent	SNP	G	G	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	GPSM1	NM_015597	exon8	c.G1071A	p.Q357Q	CCTGCAGATCTCC	.	105.0	30.0	86.0	0.0	.	50	.	.	Atlas-SNP
RABL6	55684	hgsc.bcm.edu	hg19	9	139732077	139732077	+	Silent	SNP	G	G	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	.	NM_001173988	exon9	c.G1092A	p.G364G	GTTTGGGACGTCA	.	82.0	24.0	32.0	0.0	.	.	.	.	Atlas-SNP
MAN1B1	11253	hgsc.bcm.edu	hg19	9	140001761	140001761	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	MAN1B1	NM_016219	exon11	c.C1626T	p.P542P	CCTGCCCGCCAGC	.	264.0	89.0	162.0	0.0	.	40	.	.	Atlas-SNP
GRIN1	2902	hgsc.bcm.edu	hg19	9	140057425	140057425	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	GRIN1	NM_001185091	exon16	c.C2204G	p.A735G	AGAGTGCGGCGGA	.	46.0	9.0	37.0	0.0	.	51	.	.	Atlas-SNP
JMJD1C	221037	hgsc.bcm.edu	hg19	10	64952867	64952867	+	Silent	SNP	G	G	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	JMJD1C	NM_032776	exon16	c.C5907T	p.C1969C	AGGCATGCACAGA	.	144.0	63.0	165.0	0.0	.	347	.	.	Atlas-SNP
PHRF1	57661	hgsc.bcm.edu	hg19	11	608299	608299	+	Missense_Mutation	SNP	C	C	T	rs200183606	bycluster	TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	PHRF1	NM_020901	exon14	c.C2840T	p.S947F	GGGCGTCTTGCAG	.	34.0	14.0	21.0	0.0	.	188	.	C|0.996;T|0.004	Atlas-SNP
ATP5B	506	hgsc.bcm.edu	hg19	12	57032145	57032145	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	ATP5B	NM_001686	exon10	c.G1552A	p.A518T	CTTTTGCCACAGC	.	146.0	55.0	147.0	0.0	.	48	.	.	Atlas-SNP
ATP8A2	51761	hgsc.bcm.edu	hg19	13	26153014	26153014	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	ATP8A2	NM_016529	exon21	c.A1844G	p.H615R	TATGCCATCTGGA	.	89.0	38.0	111.0	0.0	.	181	.	.	Atlas-SNP
BRCA2	675	hgsc.bcm.edu	hg19	13	32914712	32914712	+	Missense_Mutation	SNP	C	C	G	rs34309943	bycluster;byfrequency;by1000genomes;alternate_allele	TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	BRCA2	NM_000059	exon11	c.C6220G	p.H2074D	TCCTTACACAAAG	.	94.0	38.0	127.0	0.0	.	812	.	C|0.998;A|0.002	Atlas-SNP
MAB21L1	4081	hgsc.bcm.edu	hg19	13	36049710	36049710	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	MAB21L1	NM_005584	exon1	c.T566C	p.L189P	TGGGGAAGTGGCC	.	55.0	23.0	96.0	0.0	.	52	.	.	Atlas-SNP
DCLK1	9201	hgsc.bcm.edu	hg19	13	36385025	36385025	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	DCLK1_ENST00000379893,NS,carcinoma,0,3	DCLK1	NM_004734	exon12	c.C1635A	p.Y545X	GACTGTGTACAGG	.	252.0	111.0	202.0	0.0	.	350	.	.	Atlas-SNP
OR4M1	441670	hgsc.bcm.edu	hg19	14	20249191	20249191	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	OR4M1	NM_001005500	exon1	c.G710A	p.R237K	CCAACAGGGCCAT	.	693.0	279.0	701.0	0.0	.	104	.	.	Atlas-SNP
POLE2	5427	hgsc.bcm.edu	hg19	14	50140883	50140883	+	Silent	SNP	A	A	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	POLE2	NM_001197331	exon5	c.T375C	p.D125D	TGCTTTATCTCTT	.	167.0	78.0	182.0	0.0	.	36	.	.	Atlas-SNP
GPHN	10243	hgsc.bcm.edu	hg19	14	67646366	67646366	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	GPHN	NM_020806	exon22	c.A2151T	p.E717D	CCAAGAACCACTA	.	300.0	139.0	329.0	0.0	.	79	.	.	Atlas-SNP
CCDC88C	440193	hgsc.bcm.edu	hg19	14	91770248	91770248	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	CCDC88C	NM_001080414	exon20	c.G3432A	p.T1144T	CTTGGCCGTGTGG	.	130.0	51.0	100.0	0.0	.	192	.	.	Atlas-SNP
APBA2	321	hgsc.bcm.edu	hg19	15	29346830	29346830	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	APBA2	NM_005503	exon3	c.C743T	p.A248V	GTGAGGCCAGCCC	.	134.0	60.0	126.0	0.0	.	132	.	.	Atlas-SNP
ST8SIA2	8128	hgsc.bcm.edu	hg19	15	93007604	93007604	+	Missense_Mutation	SNP	G	G	T	rs149476731		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	ST8SIA2	NM_006011	exon6	c.G1117T	p.G373W	TGCGATGGGGCCA	.	86.0	26.0	45.0	0.0	.	41	.	G|1.000;T|0.000	Atlas-SNP
LOC81691	0	hgsc.bcm.edu	hg19	16	20826252	20826252	+	Missense_Mutation	SNP	G	G	T	rs201728796	by1000genomes;alternate_allele	TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	LOC81691	NM_030941	exon4	c.G255T	p.W85C	CAGCTGGTGCCAG	.	184.0	76.0	211.0	0.0	.	41	.	G|1.000;A|0.000	Atlas-SNP
METTL9	51108	hgsc.bcm.edu	hg19	16	21636425	21636425	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	METTL9	NM_016025	exon4	c.A740G	p.Y247C	ATCCCTATGTGGA	.	139.0	46.0	169.0	0.0	.	18	.	.	Atlas-SNP
MAZ	4150	hgsc.bcm.edu	hg19	16	29820038	29820038	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	MAZ	NM_002383	exon4	c.C1255T	p.H419Y	CCTCACCATGTCT	.	85.0	36.0	104.0	0.0	.	48	.	.	Atlas-SNP
ATP2C2	9914	hgsc.bcm.edu	hg19	16	84486812	84486812	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	ATP2C2	NM_014861	exon19	c.A1900T	p.K634X	GTGGAGAAGGGCG	.	115.0	49.0	111.0	0.0	.	75	.	.	Atlas-SNP
COTL1	23406	hgsc.bcm.edu	hg19	16	84623756	84623756	+	Silent	SNP	G	G	A	rs376530038		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	COTL1	NM_021149	exon3	c.C273T	p.R91R	TTTGGCGCGCTGC	.	139.0	67.0	120.0	0.0	.	17	.	.	Atlas-SNP
G6PC	2538	hgsc.bcm.edu	hg19	17	41063222	41063222	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	G6PC	NM_000151	exon5	c.A853G	p.K285E	AGCTGCAAGGGGA	.	177.0	74.0	155.0	0.0	.	48	.	.	Atlas-SNP
GH1	2688	hgsc.bcm.edu	hg19	17	61994712	61994712	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	GH1	NM_000515	exon5	c.G611A	p.R204H	ACGATGCGCAGGA	.	610.0	163.0	413.0	1.0	.	39	.	.	Atlas-SNP
ICAM1	3383	hgsc.bcm.edu	hg19	19	10385686	10385686	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	ICAM1	NM_000201	exon2	c.A313G	p.T105A	GCTAAAACCTTCC	.	55.0	31.0	77.0	0.0	.	32	.	.	Atlas-SNP
ATP13A1	57130	hgsc.bcm.edu	hg19	19	19756558	19756558	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	ATP13A1	NM_020410	exon25	c.G3402A	p.L1134L	CCACACCAGGGGC	.	85.0	53.0	81.0	0.0	.	82	.	.	Atlas-SNP
WDR87	83889	hgsc.bcm.edu	hg19	19	38383656	38383656	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	WDR87	NM_031951	exon4	c.C2570T	p.T857I	CTGTAGGTTACAT	.	373.0	182.0	315.0	1.0	.	191	.	.	Atlas-SNP
RRBP1	6238	hgsc.bcm.edu	hg19	20	17596122	17596122	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	RRBP1	NM_004587	exon23	c.C2705T	p.A902V	GGGCCGGCTGTGC	.	100.0	44.0	97.0	0.0	.	157	.	.	Atlas-SNP
RRP1B	23076	hgsc.bcm.edu	hg19	21	45092191	45092191	+	Silent	SNP	A	A	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	RRP1B	NM_015056	exon3	c.A216G	p.E72E	GCAGGAAGAGCTC	.	118.0	54.0	139.0	0.0	.	51	.	.	Atlas-SNP
MAP3K15	389840	hgsc.bcm.edu	hg19	X	19410152	19410152	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	MAP3K15	NM_001001671	exon18	c.C2399T	p.A800V	ACACCCGCAAGAC	.	49.0	44.0	36.0	0.0	.	108	.	.	Atlas-SNP
EIF2S3	1968	hgsc.bcm.edu	hg19	X	24084190	24084190	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	EIF2S3	NM_001415	exon8	c.T848C	p.I283T	GTAGTATCCTAAA	.	387.0	347.0	479.0	0.0	.	31	.	.	Atlas-SNP
AFF2	2334	hgsc.bcm.edu	hg19	X	147744245	147744245	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	AFF2	NM_002025	exon3	c.T997A	p.S333T	GCCAGTTCAAAGA	.	309.0	288.0	357.0	1.0	.	679	.	.	Atlas-SNP
PCDH11Y	83259	hgsc.bcm.edu	hg19	Y	4925278	4925278	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	PCDH11Y	NM_032972	exon1	c.C414T	p.C138C	GCATTGCTTTTAT	.	684.0	496.0	736.0	1.0	.	163	.	.	Atlas-SNP
COX1	5742	hgsc.bcm.edu	hg19	MT	6478	6478	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	.	ENST00000361624	exon1	c.C575T	p.A192V	TCACAGCAGTCCT	.	179.0	168.0	332.0	0.0	.	.	.	.	Atlas-SNP
CSPG5	10675	hgsc.bcm.edu	hg19	3	47618408	47618409	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	CSPG5,NS,carcinoma,0,1	CSPG5	NM_001206944	exon2	c.1108_1109insC	p.C370fs	.	.	159.0	10.0	130.0	0.0	.	46	.	.	Atlas-INDEL
NR3C2	4306	hgsc.bcm.edu	hg19	4	149075987	149075988	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	NR3C2	NM_000901	exon5	c.2080_2081insG	p.P694fs	.	.	146.0	10.0	106.0	0.0	.	94	.	.	Atlas-INDEL
ACSBG1	23205	hgsc.bcm.edu	hg19	15	78472115	78472136	+	In_Frame_Del	DEL	TCAGGTCGCTGGTGGGAGAGGG	TCAGGTCGCTGGTGGGAGAGGG	-	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	TCAGGTCGCTGGTGGGAGAGGG	TCAGGTCGCTGGTGGGAGAGGG	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	ACSBG1	NM_015162	exon10	c.1254_1262del	p.418_421del	.	.	152.0	14.0	125.0	0.0	.	79	.	.	Atlas-INDEL
ZNF785	146540	hgsc.bcm.edu	hg19	16	30594358	30594358	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	ZNF785	NM_152458	exon3	c.742delC	p.R248fs	.	.	68.0	31.0	68.0	0.0	.	30	.	.	Atlas-Indel,Pindel
MED24	9862	hgsc.bcm.edu	hg19	17	38185119	38185120	+	Frame_Shift_Ins	INS	-	-	GGGG	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	MED24,colon,carcinoma,0,1	MED24	NM_014815	exon14	c.1369_1370insCCCC	p.A457fs	.	.	72.0	12.0	102.0	0.0	.	89	.	.	Atlas-INDEL
PCDHGC5	56097	hgsc.bcm.edu	hg19	5	140869331	140869332	+	Frame_Shift_Ins	INS	-	-	C	rs145669059	bycluster;by1000genomes;alternate_allele	TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	.	PCDHGC5	NM_018929	exon1	c.524_525insC	p.N175fs	.	.	122.0	11.0	86.0	0.0	.	199	.	.	Atlas-INDEL
PRB3	5544	hgsc.bcm.edu	hg19	12	11420457	11420583	+	Frame_Shift_Del	DEL	GAGGGTGGGGGACCTTGAGGTTTGTTGCCTCCTTGTGAAGGTGGTCCTTCTGGCTTTCCTGGACGAGGTGGGGGACCTTGGGACTGGTTTCCTCCTTGTGGGGGTGGTCCTTCTGGCTTTCCTGGAC	GAGGGTGGGGGACCTTGAGGTTTGTTGCCTCCTTGTGAAGGTGGTCCTTCTGGCTTTCCTGGACGAGGTGGGGGACCTTGGGACTGGTTTCCTCCTTGTGGGGGTGGTCCTTCTGGCTTTCCTGGAC	-	novel		TCGA-BC-A10Y-01A-11D-A12Z-10	TCGA-BC-A10Y-11A-11D-A12Z-10	GAGGGTGGGGGACCTTGAGGTTTGTTGCCTCCTTGTGAAGGTGGTCCTTCTGGCTTTCCTGGACGAGGTGGGGGACCTTGGGACTGGTTTCCTCCTTGTGGGGGTGGTCCTTCTGGCTTTCCTGGAC	GAGGGTGGGGGACCTTGAGGTTTGTTGCCTCCTTGTGAAGGTGGTCCTTCTGGCTTTCCTGGACGAGGTGGGGGACCTTGGGACTGGTTTCCTCCTTGTGGGGGTGGTCCTTCTGGCTTTCCTGGAC	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	54f8357c-9dd7-4e08-bd47-a1ebedb30b62	5589b608-e6ae-4953-8a37-484d4116179b	PRB3_ENST00000538488,caecum,carcinoma,0,2	PRB3	NM_006249	exon4	c.725_725del	p.242_242del	.	.	79.0	15.0	139.0	0.0	.	84	.	.	Pindel