Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq dbSNP_AF Algorithm PRKCZ 5590 hgsc.bcm.edu hg19 1 2106687 2106687 + Missense_Mutation SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . PRKCZ NM_002744 exon16 c.C1510T p.R504W GGCTGCCGGCCAC . 88.0 41.0 108.0 0.0 . 84 . . Atlas-SNP TMEM39B 55116 hgsc.bcm.edu hg19 1 32557607 32557607 + Missense_Mutation SNP G G A rs202154275 bycluster TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . TMEM39B NM_018056 exon6 c.G922A p.V308M TGGTTCGTGAAGG . 33.0 5.0 52.0 0.0 . 66 . . Atlas-SNP INADL 10207 hgsc.bcm.edu hg19 1 62579830 62579830 + Missense_Mutation SNP T T G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . INADL NM_176877 exon35 c.T4567G p.Y1523D GCACACTACCGGG . 147.0 59.0 158.0 0.0 . 179 . . Atlas-SNP MSH4 4438 hgsc.bcm.edu hg19 1 76349304 76349304 + Splice_Site SNP A A C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . MSH4 NM_002440 exon15 c.1907-2A>C . TTCTTAAGTTCGA . 126.0 28.0 90.0 0.0 . 147 . . Atlas-SNP APCS 325 hgsc.bcm.edu hg19 1 159558023 159558023 + Missense_Mutation SNP A A G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . APCS NM_001639 exon2 c.A197G p.Y66C GTGCCTACAGCCT . 170.0 54.0 51.0 0.0 . 48 . . Atlas-SNP CCDC19 25790 hgsc.bcm.edu hg19 1 159854288 159854288 + Missense_Mutation SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . CCDC19 NM_012337 exon7 c.C835T p.R279W GCTCCCGCTGCTC . 56.0 6.0 45.0 0.0 . 79 . . Atlas-SNP NCSTN 23385 hgsc.bcm.edu hg19 1 160321028 160321028 + Missense_Mutation SNP A A G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . NCSTN NM_015331 exon6 c.A599G p.N200S ATCACAACCTGAG . 283.0 79.0 183.0 0.0 . 64 . . Atlas-SNP LMOD1 25802 hgsc.bcm.edu hg19 1 201868843 201868843 + Missense_Mutation SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . LMOD1 NM_012134 exon2 c.C1298T p.T433M ATCTCCGTCTTGC . 195.0 32.0 110.0 0.0 . 59 . . Atlas-SNP MIA3 375056 hgsc.bcm.edu hg19 1 222791466 222791466 + Missense_Mutation SNP C C G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . MIA3 NM_198551 exon1 c.C14G p.P5R CGGCGCCTGGGCT . 135.0 37.0 81.0 0.0 . 167 . . Atlas-SNP FMN2 56776 hgsc.bcm.edu hg19 1 240256479 240256479 + Missense_Mutation SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . FMN2 NM_020066 exon1 c.C1070T p.A357V AGGATGCGCCCCG . 76.0 12.0 43.0 0.0 . 451 . . Atlas-SNP ROCK2 9475 hgsc.bcm.edu hg19 2 11341101 11341101 + Silent SNP T T C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . ROCK2 NM_004850 exon23 c.A2892G p.K964K AGCATCTTTTTCC . 90.0 5.0 108.0 0.0 . 224 . . Atlas-SNP TTC30A 92104 hgsc.bcm.edu hg19 2 178482808 178482808 + Missense_Mutation SNP G G C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d TTC30A,colon,carcinoma,0,1 TTC30A NM_152275 exon1 c.C622G p.L208V GCTTCAGTGCTGA . 120.0 29.0 84.0 0.0 . 60 . . Atlas-SNP TTN 7273 hgsc.bcm.edu hg19 2 179567285 179567285 + Nonsense_Mutation SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . TTN NM_001267550 exon107 c.G30329A p.W10110X TTGTACCATGTTA . 118.0 29.0 87.0 0.0 . 18412 . . Atlas-SNP ITGA4 3676 hgsc.bcm.edu hg19 2 182358128 182358128 + Silent SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . ITGA4 NM_000885 exon11 c.C1230T p.I410I TGGGATCTCGTCA . 98.0 20.0 65.0 0.0 . 142 . . Atlas-SNP RUFY4 285180 hgsc.bcm.edu hg19 2 218939997 218939997 + Missense_Mutation SNP A A G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . RUFY4 NM_198483 exon9 c.A782G p.Y261C ATAGGTACCCCCA . 253.0 116.0 259.0 1.0 . 59 . . Atlas-SNP SPEG 10290 hgsc.bcm.edu hg19 2 220348089 220348089 + Silent SNP C C A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . SPEG NM_005876 exon30 c.C5904A p.A1968A GGCTGCCACCCCC . 78.0 38.0 65.0 0.0 . 272 . . Atlas-SNP RBMS3 27303 hgsc.bcm.edu hg19 3 29476348 29476348 + Missense_Mutation SNP T T A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . RBMS3 NM_001003793 exon2 c.T190A p.Y64N AACCTGTACATTC . 329.0 139.0 278.0 1.0 . 62 . . Atlas-SNP ULK4 54986 hgsc.bcm.edu hg19 3 41607592 41607592 + Silent SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . ULK4 NM_017886 exon32 c.C3150T p.T1050T TTGCATGGTATTA . 104.0 28.0 85.0 0.0 . 150 . . Atlas-SNP DNAH1 25981 hgsc.bcm.edu hg19 3 52419370 52419370 + Silent SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . DNAH1 NM_015512 exon54 c.G8532A p.E2844E TTCTGAGGATGTA . 99.0 54.0 111.0 0.0 . 534 . . Atlas-SNP ABI3BP 25890 hgsc.bcm.edu hg19 3 100508351 100508351 + Missense_Mutation SNP C C G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . ABI3BP NM_015429 exon24 c.G1976C p.R659T TAAAATCTGTGTG . 93.0 29.0 53.0 0.0 . 305 . . Atlas-SNP RETNLB 84666 hgsc.bcm.edu hg19 3 108474658 108474658 + Missense_Mutation SNP G G T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . RETNLB NM_032579 exon3 c.C303A p.D101E GGTCCAGTCCACC . 278.0 175.0 330.0 2.0 . 38 . . Atlas-SNP EPHB3 2049 hgsc.bcm.edu hg19 3 184295691 184295691 + Missense_Mutation SNP G G T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . EPHB3 NM_004443 exon8 c.G1645T p.G549W GGCTCTGGGGCCC . 67.0 20.0 74.0 0.0 . 114 . . Atlas-SNP ATP13A4 84239 hgsc.bcm.edu hg19 3 193120567 193120567 + Missense_Mutation SNP C C A rs200859894 by1000genomes;alternate_allele TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d ATP13A4,colon,carcinoma,0,1 ATP13A4 NM_032279 exon30 c.G3465T p.Q1155H GTCCCTCTGCCAT . 72.0 22.0 45.0 0.0 . 154 . C|1.000;T|0.000 Atlas-SNP C4orf21 55345 hgsc.bcm.edu hg19 4 113527240 113527240 + Missense_Mutation SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d C4orf21_ENST00000505019,rectum,carcinoma,0,2 C4orf21 NM_018392 exon9 c.C2726T p.S909F CCCGAGGAAGAGA . 85.0 26.0 78.0 0.0 . 223 . . Atlas-SNP ANP32C 23520 hgsc.bcm.edu hg19 4 165118848 165118848 + Missense_Mutation SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d ANP32C,bladder,carcinoma,0,2 ANP32C NM_012403 exon1 c.C16T p.R6W GAATCCGTCTGCC . 71.0 22.0 66.0 0.0 . 59 . . Atlas-SNP HELT 391723 hgsc.bcm.edu hg19 4 185940140 185940140 + Missense_Mutation SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . HELT NM_001029887 exon1 c.G58A p.A20T ACTTGCGCCCTGG . 138.0 86.0 167.0 0.0 . 34 . . Atlas-SNP BDP1 55814 hgsc.bcm.edu hg19 5 70782327 70782327 + Silent SNP T T C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . BDP1 NM_018429 exon9 c.T1086C p.F362F CCCTTTTGACTTC . 321.0 79.0 239.0 0.0 . 204 . . Atlas-SNP IER3 8870 hgsc.bcm.edu hg19 6 30712143 30712143 + Silent SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . IER3 NM_003897 exon1 c.C153T p.R51R GCTGGGGCGCCCG . 224.0 53.0 143.0 0.0 . 5 . . Atlas-SNP NOX3 50508 hgsc.bcm.edu hg19 6 155776002 155776002 + Missense_Mutation SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . NOX3 NM_015718 exon3 c.G198A p.M66I AATTAGCATGCAG . 124.0 80.0 120.0 0.0 . 93 . . Atlas-SNP USP42 84132 hgsc.bcm.edu hg19 7 6150812 6150812 + Silent SNP T T C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . USP42 NM_032172 exon2 c.T48C p.Y16Y AGCCTATCAGAAT . 173.0 66.0 106.0 0.0 . 138 . . Atlas-SNP HOXA2 3199 hgsc.bcm.edu hg19 7 27141906 27141906 + Missense_Mutation SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . HOXA2 NM_006735 exon1 c.C214T p.R72C TGGGGCGGCCGCC . 764.0 41.0 828.0 0.0 . 56 . . Atlas-SNP GLI3 2737 hgsc.bcm.edu hg19 7 42065983 42065983 + Missense_Mutation SNP C C T rs375277249 TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . GLI3 NM_000168 exon8 c.G1057A p.A353T CGGGCGCGGAAGA . 136.0 36.0 94.0 0.0 . 312 . . Atlas-SNP AEBP1 165 hgsc.bcm.edu hg19 7 44153377 44153377 + Silent SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . AEBP1 NM_001129 exon21 c.G2994A p.G998G GAACGGGAACCGG . 150.0 60.0 114.0 0.0 . 102 . . Atlas-SNP POM121L12 285877 hgsc.bcm.edu hg19 7 53103524 53103524 + Missense_Mutation SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . POM121L12 NM_182595 exon1 c.C160T p.P54S CCCTGGCCCCTGA . 299.0 50.0 229.0 0.0 . 146 . . Atlas-SNP ABCB1 5243 hgsc.bcm.edu hg19 7 87160674 87160674 + Missense_Mutation SNP A A G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . ABCB1 NM_000927 exon22 c.T2621C p.V874A ATTTCAACAACTC . 182.0 79.0 85.0 0.0 . 263 . . Atlas-SNP FLNC 2318 hgsc.bcm.edu hg19 7 128492798 128492798 + Missense_Mutation SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d FLNC,NS,carcinoma,0,2 FLNC NM_001458 exon36 c.G5996A p.R1999Q CCAACCGGCACAT . 157.0 118.0 162.0 0.0 . 339 . . Atlas-SNP ARHGEF10 9639 hgsc.bcm.edu hg19 8 1830810 1830810 + Missense_Mutation SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . ARHGEF10 NM_014629 exon10 c.C970T p.L324F CAGAAGCTCGTGA . 247.0 128.0 262.0 1.0 . 255 . . Atlas-SNP CPEB3 22849 hgsc.bcm.edu hg19 10 93811980 93811980 + Missense_Mutation SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . CPEB3 NM_014912 exon10 c.C2086T p.R696C TCCAGCGGAACGG . 96.0 55.0 112.0 0.0 . 43 . . Atlas-SNP SMC3 9126 hgsc.bcm.edu hg19 10 112349410 112349410 + Silent SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . SMC3 NM_005445 exon14 c.G1353A p.L451L AGAACTGGACAGA . 720.0 176.0 718.0 0.0 . 103 . . Atlas-SNP TACC2 10579 hgsc.bcm.edu hg19 10 123845998 123845998 + Missense_Mutation SNP G G T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . TACC2 NM_206862 exon4 c.G3983T p.C1328F TGCCATGCCTGGA . 74.0 14.0 80.0 0.0 . 271 . . Atlas-SNP SWAP70 23075 hgsc.bcm.edu hg19 11 9754136 9754136 + Missense_Mutation SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d SWAP70,NS,carcinoma,0,1 SWAP70 NM_015055 exon7 c.G959A p.R320H AAGCCCGCCAGCG . 311.0 148.0 262.0 0.0 . 40 . . Atlas-SNP ACRBP 84519 hgsc.bcm.edu hg19 12 6747504 6747504 + Missense_Mutation SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d ACRBP,caecum,carcinoma,0,1 ACRBP NM_032489 exon10 c.G1576A p.V526I GCACAACGTCCTC . 75.0 16.0 78.0 0.0 . 52 . . Atlas-SNP SYT10 341359 hgsc.bcm.edu hg19 12 33560128 33560128 + Missense_Mutation SNP G G C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . SYT10 NM_198992 exon3 c.C673G p.Q225E CGTTTTGGTTGCC . 129.0 31.0 103.0 0.0 . 109 . . Atlas-SNP POLE 5426 hgsc.bcm.edu hg19 12 133254296 133254296 + Silent SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . POLE NM_006231 exon7 c.G588A p.Q196Q GCCCCTCTGCAGA . 108.0 77.0 162.0 0.0 . 416 . . Atlas-SNP OR4K17 390436 hgsc.bcm.edu hg19 14 20586326 20586326 + Missense_Mutation SNP T T A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . OR4K17 NM_001004715 exon1 c.T761A p.I254K TCCTCATAACCAT . 159.0 7.0 64.0 0.0 . 58 . . Atlas-SNP PATL2 197135 hgsc.bcm.edu hg19 15 44964221 44964221 + Missense_Mutation SNP A A G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . PATL2 NM_001145112 exon7 c.T649C p.Y217H GGTAATAGTAGTC . 76.0 47.0 126.0 0.0 . 19 . . Atlas-SNP FAM214A 56204 hgsc.bcm.edu hg19 15 52879386 52879386 + Missense_Mutation SNP T T C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . . NM_019600 exon11 c.A2839G p.R947G AACCCCTTTTACC . 132.0 6.0 143.0 0.0 . . . . Atlas-SNP PDE8A 5151 hgsc.bcm.edu hg19 15 85652345 85652345 + Silent SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . PDE8A NM_002605 exon12 c.C1098T p.A366A TGTTGCCTCCCGT . 342.0 240.0 333.0 0.0 . 50 . . Atlas-SNP MCTP2 55784 hgsc.bcm.edu hg19 15 94901809 94901809 + Missense_Mutation SNP G G T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . MCTP2 NM_001159643 exon9 c.G1269T p.K423N GGGAAAGGACAAC . 142.0 86.0 170.0 0.0 . 122 . . Atlas-SNP WDR90 197335 hgsc.bcm.edu hg19 16 706396 706396 + Silent SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . WDR90 NM_145294 exon18 c.G2061A p.T687T GGACACGCTGTCC . 76.0 26.0 90.0 0.0 . 107 . . Atlas-SNP GGA2 23062 hgsc.bcm.edu hg19 16 23486224 23486224 + Splice_Site SNP C C G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . GGA2 NM_015044 exon15 c.1450+1G>C . TACTTACTGGGCT . 307.0 199.0 410.0 1.0 . 49 . . Atlas-SNP SF3B3 23450 hgsc.bcm.edu hg19 16 70601427 70601427 + Missense_Mutation SNP A A T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . SF3B3 NM_012426 exon21 c.A2940T p.K980N CCGAAAATGTGAG . 118.0 79.0 162.0 0.0 . 99 . . Atlas-SNP TP53 7157 hgsc.bcm.edu hg19 17 7577547 7577547 + Missense_Mutation SNP C C T rs121912656 TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d TP53_ENST00000545858,NS,adenocarcinoma,-1,1 TP53 NM_000546 exon7 c.G734A p.G245D TTCATGCCGCCCA . 104.0 61.0 128.0 0.0 . 33396 . . Atlas-SNP ZNF286B 729288 hgsc.bcm.edu hg19 17 18565670 18565670 + Silent SNP A A G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . ZNF286B NM_001145045 exon5 c.T1149C p.Y383Y ACATTTATAAGGT . 235.0 100.0 233.0 0.0 . 75 . . Atlas-SNP KRT38 8687 hgsc.bcm.edu hg19 17 39597054 39597054 + Silent SNP A A G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . KRT38 NM_006771 exon1 c.T120C p.I40I GGGGGCAATGTTG . 146.0 38.0 126.0 0.0 . 63 . . Atlas-SNP KLHL11 55175 hgsc.bcm.edu hg19 17 40021606 40021606 + Silent SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . KLHL11 NM_018143 exon1 c.G18A p.V6V CGCCGCCACTGCC . 24.0 5.0 17.0 0.0 . 44 . . Atlas-SNP HDAC5 10014 hgsc.bcm.edu hg19 17 42157529 42157529 + Missense_Mutation SNP C C G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . HDAC5 NM_001015053 exon23 c.G2893C p.D965H CAGCATCAAACCC . 67.0 18.0 63.0 0.0 . 67 . . Atlas-SNP ACE 1636 hgsc.bcm.edu hg19 17 61568652 61568652 + Nonsense_Mutation SNP G G A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . ACE NM_000789 exon19 c.G2822A p.W941X AGTTCTGGAACAA . 84.0 17.0 62.0 0.0 . 187 . . Atlas-SNP ERN1 2081 hgsc.bcm.edu hg19 17 62135324 62135324 + Missense_Mutation SNP T T G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . ERN1 NM_001433 exon12 c.A1236C p.E412D TGCGTTTTCTGAA . 72.0 28.0 99.0 0.0 . 102 . . Atlas-SNP CANT1 124583 hgsc.bcm.edu hg19 17 76993228 76993228 + Silent SNP C C T rs149367726 TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . CANT1 NM_001159772 exon4 c.G477A p.A159A CTTCTCCGCCAGG . 113.0 31.0 116.0 0.0 . 39 . C|1.000;T|0.000 Atlas-SNP MEX3C 51320 hgsc.bcm.edu hg19 18 48703513 48703513 + Silent SNP T T A rs140545981 TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . MEX3C NM_016626 exon2 c.A1188T p.G396G ATAGTTTCCTGTA . 74.0 36.0 42.0 0.0 . 77 . T|1.000;A|0.000 Atlas-SNP PTBP1 5725 hgsc.bcm.edu hg19 19 806459 806459 + Missense_Mutation SNP C C T rs375905582 TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . PTBP1 NM_002819 exon10 c.C1022T p.S341L TCCCCTCGGCGGC . 205.0 58.0 196.0 0.0 . 43 . . Atlas-SNP APBA3 9546 hgsc.bcm.edu hg19 19 3759745 3759745 + Missense_Mutation SNP T T G novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . APBA3 NM_004886 exon2 c.A518C p.E173A CAGGGTTCCGGGG . 89.0 35.0 109.0 0.0 . 28 . . Atlas-SNP MUC16 94025 hgsc.bcm.edu hg19 19 9074291 9074291 + Silent SNP C C A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . MUC16 NM_024690 exon3 c.G13155T p.V4385V GATGGTCACTCCT . 160.0 13.0 105.0 0.0 . 4315 . . Atlas-SNP CRTC1 23373 hgsc.bcm.edu hg19 19 18870874 18870874 + Missense_Mutation SNP A A T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . CRTC1 NM_001098482 exon9 c.A770T p.N257I CCCACAACACAGG . 231.0 52.0 245.0 0.0 . 88 . . Atlas-SNP PPP5C 5536 hgsc.bcm.edu hg19 19 46893387 46893387 + Missense_Mutation SNP G G C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . PPP5C NM_006247 exon12 c.G1435C p.V479L ACAGCAGTGGTGA . 131.0 34.0 112.0 0.0 . 44 . . Atlas-SNP SLC8A2 6543 hgsc.bcm.edu hg19 19 47960453 47960453 + Silent SNP C C T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d SLC8A2,colon,carcinoma,0,1 SLC8A2 NM_015063 exon3 c.G1074A p.T358T CAGCCGCGTGGCC . 68.0 7.0 92.0 1.0 . 77 . . Atlas-SNP C20orf26 26074 hgsc.bcm.edu hg19 20 20150059 20150059 + Missense_Mutation SNP C C A novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . C20orf26 NM_015585 exon13 c.C1340A p.T447N CCTGCACCCTCGA . 188.0 34.0 121.0 0.0 . 188 . . Atlas-SNP ZDHHC15 158866 hgsc.bcm.edu hg19 X 74644581 74644581 + Silent SNP A A T novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . ZDHHC15 NM_144969 exon8 c.T642A p.L214L AAGAAAAAGGACA . 677.0 441.0 580.0 0.0 . 65 . . Atlas-SNP TAF9B 51616 hgsc.bcm.edu hg19 X 77393577 77393577 + Missense_Mutation SNP A A C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . TAF9B NM_015975 exon3 c.T152G p.L51R TCATCCAGAATTG . 282.0 182.0 365.0 1.0 . 30 . . Atlas-SNP NKAP 79576 hgsc.bcm.edu hg19 X 119077493 119077493 + Missense_Mutation SNP T T C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . NKAP NM_024528 exon1 c.A76G p.K26E GACTCTTCGACGA . 156.0 109.0 229.0 0.0 . 53 . . Atlas-SNP MCCC1 56922 hgsc.bcm.edu hg19 3 182756812 182756832 + Frame_Shift_Del DEL GATCACTCACATTGTACTGAC GATCACTCACATTGTACTGAC - novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 GATCACTCACATTGTACTGAC GATCACTCACATTGTACTGAC . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . MCCC1 NM_020166 exon12 c.1368_1377del p.456_459del . . 158.0 32.0 116.0 0.0 . 87 . . Atlas-Indel,Pindel SLC12A5 57468 hgsc.bcm.edu hg19 20 44650434 44650435 + Frame_Shift_Ins INS - - C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . SLC12A5 NM_001134771 exon1 c.30_31insC p.L10fs . . 60.0 10.0 39.0 0.0 . 181 . . Atlas-INDEL RASL11A 387496 hgsc.bcm.edu hg19 13 27847361 27847361 + Frame_Shift_Del DEL T T - novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . RASL11A NM_206827 exon4 c.458delA p.H153fs . . 168.0 122.0 264.0 0.0 . 26 . . Atlas-Indel,Pindel H6PD 9563 hgsc.bcm.edu hg19 1 9323715 9323737 + Frame_Shift_Del DEL CGGCGCAGAGCCAGTGCCTGCCC CGGCGCAGAGCCAGTGCCTGCCC - novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 CGGCGCAGAGCCAGTGCCTGCCC CGGCGCAGAGCCAGTGCCTGCCC . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . H6PD NM_004285 exon5 c.1162_1184del p.388_395del . . 153.0 46.0 150.0 0.0 . 71 . . Atlas-Indel,Pindel AKAP6 9472 hgsc.bcm.edu hg19 14 32902724 32902725 + Frame_Shift_Ins INS - - C novel TCGA-2Y-A9H8-01A-11D-A38X-10 TCGA-2Y-A9H8-10A-01D-A38X-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq a8ce4db3-59d7-41a4-bd0d-d6dc39a003e4 ea9d6487-fc5c-429d-9870-af174a03bd4d . AKAP6 NM_004274 exon2 c.25_26insC p.S9fs . . 156.0 13.0 99.0 0.0 . 308 . . Atlas-Indel,Pindel