Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	dbSNP_AF	Algorithm
CASP9	842	hgsc.bcm.edu	hg19	1	15820444	15820444	+	Silent	SNP	C	C	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	CASP9	NM_001229	exon8	c.G1101T	p.L367L	GTCGTCCAGGGTC	.	27.0	11.0	23.0	0.0	.	40	.	.	Atlas-SNP
SH3D21	79729	hgsc.bcm.edu	hg19	1	36786280	36786280	+	Silent	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	SH3D21	NM_001162530	exon14	c.C2016T	p.L672L	CGCGCTCCCCTCG	.	229.0	42.0	231.0	0.0	.	73	.	.	Atlas-SNP
FHL3	2275	hgsc.bcm.edu	hg19	1	38463418	38463418	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	FHL3	NM_004468	exon5	c.G626A	p.C209Y	GCCACACAGTAGG	.	129.0	31.0	141.0	0.0	.	9	.	.	Atlas-SNP
PDE4DIP	9659	hgsc.bcm.edu	hg19	1	144857701	144857701	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	PDE4DIP	NM_014644	exon39	c.A6353G	p.D2118G	CCAACATCCCGGA	.	128.0	12.0	111.0	0.0	.	817	.	.	Atlas-SNP
SYT11	23208	hgsc.bcm.edu	hg19	1	155851003	155851003	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	SYT11	NM_152280	exon4	c.G1000T	p.V334L	GTCAAGGTGAACG	.	317.0	141.0	243.0	1.0	.	55	.	.	Atlas-SNP
KIAA0907	22889	hgsc.bcm.edu	hg19	1	155891652	155891652	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	KIAA0907	NM_014949	exon9	c.G1012A	p.G338S	ACACACCTGGTAA	.	623.0	91.0	465.0	0.0	.	58	.	.	Atlas-SNP
UBQLN4	56893	hgsc.bcm.edu	hg19	1	156021615	156021615	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	UBQLN4	NM_020131	exon2	c.C142T	p.Q48X	CCTGCTGAGCCTT	.	151.0	15.0	67.0	0.0	.	47	.	.	Atlas-SNP
FCRL5	83416	hgsc.bcm.edu	hg19	1	157497415	157497415	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	FCRL5	NM_031281	exon9	c.G1952T	p.S651I	ATAACACTGAGTG	.	154.0	28.0	95.0	0.0	.	177	.	.	Atlas-SNP
FCRL1	115350	hgsc.bcm.edu	hg19	1	157765893	157765893	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	FCRL1	NM_052938	exon11	c.T1286C	p.M429T	CCTTACATAGCAT	.	205.0	19.0	126.0	0.0	.	164	.	.	Atlas-SNP
NR1I3	9970	hgsc.bcm.edu	hg19	1	161200931	161200931	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	NR1I3	NM_001077478	exon7	c.G799C	p.A267P	TGGCAGCCAAGAG	.	177.0	23.0	134.0	0.0	.	74	.	.	Atlas-SNP
RFWD2	64326	hgsc.bcm.edu	hg19	1	175958611	175958611	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	RFWD2,NS,carcinoma,0,1	RFWD2	NM_022457	exon16	c.C1734G	p.H578Q	GACACAGTGATCT	.	113.0	16.0	93.0	0.0	.	67	.	.	Atlas-SNP
IGFN1	91156	hgsc.bcm.edu	hg19	1	201195085	201195085	+	Silent	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	IGFN1	NM_001164586	exon22	c.G10620T	p.A3540A	CTCAGCGCACGGT	.	148.0	37.0	146.0	0.0	.	220	.	.	Atlas-SNP
C4BPB	725	hgsc.bcm.edu	hg19	1	207262708	207262708	+	Splice_Site	SNP	T	T	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	C4BPB	.	.	.	.	CTGTCGTAAGATT	.	45.0	10.0	26.0	0.0	.	19	.	.	Atlas-SNP
RYR2	6262	hgsc.bcm.edu	hg19	1	237754162	237754162	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	RYR2	NM_001035	exon31	c.G4030A	p.E1344K	GACTTTGAGGTTC	.	184.0	24.0	143.0	0.0	.	1273	.	.	Atlas-SNP
FMN2	56776	hgsc.bcm.edu	hg19	1	240370837	240370837	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	FMN2,right_upper_lobe,carcinoma,0,1	FMN2	NM_020066	exon5	c.C2725T	p.P909S	ATGCTGCCACCCC	.	136.0	22.0	141.0	0.0	.	451	.	.	Atlas-SNP
SDCCAG8	10806	hgsc.bcm.edu	hg19	1	243589807	243589807	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	SDCCAG8	NM_006642	exon16	c.A1932C	p.E644D	TGAAGAATTGGAG	.	871.0	156.0	614.0	1.0	.	73	.	.	Atlas-SNP
KIF26B	55083	hgsc.bcm.edu	hg19	1	245775173	245775173	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	KIF26B	NM_018012	exon9	c.A1993G	p.R665G	TCCCGCAGGAGCC	.	134.0	22.0	102.0	0.0	.	343	.	.	Atlas-SNP
TPO	7173	hgsc.bcm.edu	hg19	2	1481106	1481106	+	Silent	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TPO	NM_175719	exon8	c.C1068T	p.L356L	GCGCCTCCGGGAC	.	957.0	221.0	983.0	0.0	.	224	.	.	Atlas-SNP
SOS1	6654	hgsc.bcm.edu	hg19	2	39250230	39250230	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	SOS1	NM_005633	exon10	c.G1339A	p.E447K	TTCCTTCCATTAT	.	112.0	16.0	105.0	0.0	.	134	.	.	Atlas-SNP
EPB41L5	57669	hgsc.bcm.edu	hg19	2	120922447	120922447	+	Silent	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	EPB41L5	NM_020909	exon22	c.T1923C	p.S641S	TGCATCTCTAACT	.	284.0	78.0	272.0	0.0	.	98	.	.	Atlas-SNP
SCRN3	79634	hgsc.bcm.edu	hg19	2	175287757	175287757	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	SCRN3	NM_024583	exon6	c.G899A	p.G300E	TTACAGGGACTCC	.	211.0	49.0	217.0	0.0	.	76	.	.	Atlas-SNP
PDE11A	50940	hgsc.bcm.edu	hg19	2	178936399	178936399	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	PDE11A	NM_016953	exon1	c.A766T	p.K256X	AGAATTTGGAGAC	.	66.0	24.0	56.0	0.0	.	283	.	.	Atlas-SNP
PRKRA	8575	hgsc.bcm.edu	hg19	2	179315144	179315144	+	Silent	SNP	A	A	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	PRKRA	NM_001139517	exon1	c.T27C	p.F9F	ACTGCAAAAACCA	.	151.0	9.0	151.0	0.0	.	56	.	.	Atlas-SNP
TTN	7273	hgsc.bcm.edu	hg19	2	179479398	179479398	+	Silent	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TTN	NM_001267550	exon261	c.C48843T	p.T16281T	GGTTACGGTGGCA	.	135.0	43.0	133.0	0.0	.	18412	.	.	Atlas-SNP
TTN	7273	hgsc.bcm.edu	hg19	2	179574397	179574397	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TTN	NM_001267550	exon99	c.T28649A	p.V9550E	TGCAGCACTAACG	.	131.0	28.0	121.0	0.0	.	18412	.	.	Atlas-SNP
PDE1A	5136	hgsc.bcm.edu	hg19	2	183129032	183129032	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	PDE1A	NM_001258312	exon3	c.A223G	p.T75A	ACCTTGTTTCATC	.	262.0	36.0	219.0	0.0	.	184	.	.	Atlas-SNP
STAT1	6772	hgsc.bcm.edu	hg19	2	191859857	191859857	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	STAT1	NM_007315	exon10	c.G874C	p.D292H	TAGGGTCATGTTC	.	65.0	21.0	68.0	0.0	.	93	.	.	Atlas-SNP
ANKZF1	55139	hgsc.bcm.edu	hg19	2	220099637	220099637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ANKZF1	NM_001042410	exon10	c.G1294T	p.V432L	TCTGAAGTATTGC	.	150.0	35.0	129.0	0.0	.	45	.	.	Atlas-SNP
ANO7	50636	hgsc.bcm.edu	hg19	2	242135166	242135166	+	Missense_Mutation	SNP	A	A	G	rs199644599	bycluster	TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ANO7	NM_001001891	exon4	c.A377G	p.Q126R	GGCAGCAGGACAG	.	99.0	29.0	115.0	0.0	.	136	.	.	Atlas-SNP
SLC6A6	6533	hgsc.bcm.edu	hg19	3	14487226	14487226	+	Silent	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	SLC6A6	NM_003043	exon4	c.T231C	p.G77G	TGCAGGTGCGTTT	.	73.0	20.0	96.0	0.0	.	58	.	.	Atlas-SNP
BSN	8927	hgsc.bcm.edu	hg19	3	49700756	49700756	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	BSN	NM_003458	exon7	c.A11165G	p.K3722R	ACAGCAAGAAGGG	.	77.0	15.0	80.0	0.0	.	272	.	.	Atlas-SNP
ROBO1	6091	hgsc.bcm.edu	hg19	3	78706316	78706316	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ROBO1	NM_002941	exon18	c.G2546A	p.S849N	TCCACACTGTATC	.	144.0	34.0	146.0	0.0	.	833	.	.	Atlas-SNP
ADCY5	111	hgsc.bcm.edu	hg19	3	123046605	123046605	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ADCY5	NM_183357	exon7	c.C1807T	p.R603C	GGATGCGTCTACA	.	96.0	24.0	77.0	0.0	.	169	.	.	Atlas-SNP
MAN2B2	23324	hgsc.bcm.edu	hg19	4	6602390	6602390	+	Silent	SNP	G	G	A	rs376601093		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	MAN2B2	NM_015274	exon10	c.G1446A	p.P482P	CAACCCGCTGGCC	.	76.0	4.0	103.0	0.0	.	80	.	.	Atlas-SNP
COX18	285521	hgsc.bcm.edu	hg19	4	73931079	73931079	+	Silent	SNP	T	T	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	COX18	NM_173827	exon3	c.A486C	p.R162R	GTTATCTCGCACA	.	161.0	7.0	188.0	0.0	.	20	.	.	Atlas-SNP
ALB	213	hgsc.bcm.edu	hg19	4	74280813	74280813	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ALB	NM_000477	exon9	c.G1120T	p.A374S	AGACTTGCCAAGA	.	137.0	38.0	131.0	0.0	.	132	.	.	Atlas-SNP
MMRN1	22915	hgsc.bcm.edu	hg19	4	90816240	90816240	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	MMRN1	NM_007351	exon1	c.C118T	p.P40S	ACTATGCCTTCTG	.	92.0	18.0	101.0	0.0	.	174	.	.	Atlas-SNP
SLC12A7	10723	hgsc.bcm.edu	hg19	5	1053548	1053548	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	SLC12A7,NS,neuroblastoma,0,1	SLC12A7	NM_006598	exon23	c.G3076A	p.V1026I	GGACGACGCCATT	.	72.0	13.0	80.0	0.0	.	97	.	.	Atlas-SNP
EDIL3	10085	hgsc.bcm.edu	hg19	5	83402637	83402637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	EDIL3	NM_005711	exon6	c.C481A	p.P161T	CCAGTGGGCCTGA	.	131.0	21.0	136.0	0.0	.	94	.	.	Atlas-SNP
NEUROG1	4762	hgsc.bcm.edu	hg19	5	134870884	134870884	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	NEUROG1	NM_006161	exon1	c.C497T	p.P166L	TGCGGCGGCAGGA	.	82.0	25.0	80.0	0.0	.	18	.	.	Atlas-SNP
PCDHB3	56132	hgsc.bcm.edu	hg19	5	140480872	140480872	+	Silent	SNP	C	C	T	rs148121148		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	PCDHB3,NS,adenoma,0,1	PCDHB3	NM_018937	exon1	c.C639T	p.T213T	GCTCACCGCGCTG	.	123.0	22.0	134.0	0.0	.	208	.	C|1.000;T|0.000	Atlas-SNP
PCDH12	51294	hgsc.bcm.edu	hg19	5	141329103	141329103	+	Silent	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	PCDH12	NM_016580	exon3	c.C3024T	p.G1008G	TGTCTGGCCTCCA	.	95.0	23.0	94.0	0.0	.	133	.	.	Atlas-SNP
STK10	6793	hgsc.bcm.edu	hg19	5	171471887	171471887	+	Silent	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	STK10	NM_005990	exon19	c.A2906G	p.X969X	GGTTGTTAAGAAG	.	72.0	22.0	63.0	0.0	.	100	.	.	Atlas-SNP
N4BP3	23138	hgsc.bcm.edu	hg19	5	177548182	177548182	+	Silent	SNP	T	T	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	N4BP3	NM_015111	exon4	c.T936A	p.A312A	GAAGGCTGAGCGC	.	77.0	14.0	49.0	0.0	.	25	.	.	Atlas-SNP
F13A1	2162	hgsc.bcm.edu	hg19	6	6225010	6225010	+	Silent	SNP	A	A	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	F13A1	NM_000129	exon7	c.T882A	p.T294T	GCTTCCAGTCCAG	.	154.0	28.0	165.0	0.0	.	135	.	.	Atlas-SNP
HIST1H2BM	8342	hgsc.bcm.edu	hg19	6	27783152	27783152	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	HIST1H2BM	NM_003521	exon1	c.G331A	p.A111T	AAGCACGCCGTGT	.	55.0	8.0	62.0	0.0	.	36	.	.	Atlas-SNP
OR2H1	26716	hgsc.bcm.edu	hg19	6	29430083	29430083	+	Silent	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	OR2H1	NM_030883	exon3	c.C537T	p.V179V	TGAGGTCCCATCT	.	111.0	26.0	115.0	0.0	.	38	.	.	Atlas-SNP
TAPBP	6892	hgsc.bcm.edu	hg19	6	33281114	33281114	+	Silent	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TAPBP	NM_172208	exon3	c.C349A	p.R117R	GGGCCCGCGGGCA	.	54.0	4.0	49.0	0.0	.	48	.	.	Atlas-SNP
ZNF292	23036	hgsc.bcm.edu	hg19	6	87964507	87964507	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ZNF292	NM_015021	exon8	c.G1160A	p.R387H	TTAAACGTGCTTG	.	205.0	60.0	183.0	0.0	.	479	.	.	Atlas-SNP
SOGA3	387104	hgsc.bcm.edu	hg19	6	127837105	127837105	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	.	NM_001012279	exon2	c.T655C	p.S219P	AGGAGGATGGAGA	.	38.0	5.0	36.0	0.0	.	.	.	.	Atlas-SNP
AP5Z1	9907	hgsc.bcm.edu	hg19	7	4815367	4815367	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	.	NM_014855	exon1	c.G21C	p.E7D	AGCGGAGAGTTTG	.	36.0	8.0	49.0	0.0	.	.	.	.	Atlas-SNP
POM121	9883	hgsc.bcm.edu	hg19	7	72418914	72418914	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	POM121	NM_001257190	exon16	c.A2905G	p.N969D	GGACCCAATAACC	.	77.0	21.0	94.0	0.0	.	131	.	.	Atlas-SNP
PION	54103	hgsc.bcm.edu	hg19	7	77010640	77010640	+	Silent	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	PION	NM_017439	exon8	c.A558G	p.Q186Q	ATCTTCTTGGGCG	.	73.0	19.0	70.0	0.0	.	74	.	.	Atlas-SNP
MAGI2	9863	hgsc.bcm.edu	hg19	7	77998508	77998508	+	Silent	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	MAGI2	NM_012301	exon7	c.A1068G	p.K356K	ATCGATTTTTTCC	.	525.0	124.0	483.0	1.0	.	246	.	.	Atlas-SNP
GNAI1	2770	hgsc.bcm.edu	hg19	7	79846776	79846776	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	GNAI1	NM_002069	exon8	c.A1032G	p.I344M	CATCATAAAAAAT	.	220.0	44.0	214.0	0.0	.	44	.	.	Atlas-SNP
SLC26A3	1811	hgsc.bcm.edu	hg19	7	107431676	107431676	+	Silent	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	SLC26A3,NS,haematopoietic_neoplasm,0,2	SLC26A3	NM_000111	exon5	c.G387A	p.P129P	CGGAAACGGACCT	.	142.0	30.0	163.0	0.0	.	120	.	.	Atlas-SNP
NCAPG2	54892	hgsc.bcm.edu	hg19	7	158449049	158449049	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	NCAPG2	NM_017760	exon19	c.T2291C	p.I764T	TACTCAATGTAGA	.	183.0	47.0	187.0	0.0	.	80	.	.	Atlas-SNP
GSR	2936	hgsc.bcm.edu	hg19	8	30539480	30539480	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	GSR	NM_000637	exon11	c.C1252T	p.H418Y	GGGGGTGGCTGAA	.	100.0	23.0	108.0	0.0	.	53	.	.	Atlas-SNP
FNTA	2339	hgsc.bcm.edu	hg19	8	42911566	42911566	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	FNTA	NM_002027	exon1	c.C77G	p.P26R	CCCAGCCGCACCC	.	34.0	12.0	55.0	0.0	.	34	.	.	Atlas-SNP
TRPS1	7227	hgsc.bcm.edu	hg19	8	116427157	116427157	+	Silent	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TRPS1	NM_014112	exon7	c.A2979G	p.L993L	CCTCTCTAACGGG	.	168.0	21.0	105.0	0.0	.	516	.	.	Atlas-SNP
FAM135B	51059	hgsc.bcm.edu	hg19	8	139163633	139163633	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	FAM135B	NM_015912	exon13	c.G3085A	p.E1029K	CAACCTCCACAGC	.	285.0	99.0	162.0	0.0	.	423	.	.	Atlas-SNP
TMEM215	401498	hgsc.bcm.edu	hg19	9	32784868	32784868	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TMEM215	NM_212558	exon2	c.G687A	p.W229X	CAGGTGGGACCAC	.	125.0	32.0	128.0	0.0	.	38	.	.	Atlas-SNP
GOLM1	51280	hgsc.bcm.edu	hg19	9	88692475	88692475	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	GOLM1	NM_016548	exon3	c.G161T	p.R54L	GCCCTGCGGACCC	.	64.0	15.0	52.0	0.0	.	36	.	.	Atlas-SNP
CTNNAL1	8727	hgsc.bcm.edu	hg19	9	111739250	111739250	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	CTNNAL1	NM_003798	exon8	c.A1180T	p.K394X	CTTTCTTAAGTTC	.	44.0	11.0	48.0	0.0	.	51	.	.	Atlas-SNP
ADARB2	105	hgsc.bcm.edu	hg19	10	1405746	1405746	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ADARB2	NM_018702	exon3	c.C554T	p.A185V	CTGAGTGCCAGCT	.	164.0	40.0	140.0	0.0	.	95	.	.	Atlas-SNP
ZSWIM8	23053	hgsc.bcm.edu	hg19	10	75561253	75561253	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	.	NM_001242488	exon26	c.C5398T	p.R1800X	CTCACTCGAGATG	.	91.0	18.0	77.0	0.0	.	.	.	.	Atlas-SNP
LRIT2	340745	hgsc.bcm.edu	hg19	10	85982126	85982126	+	Silent	SNP	A	A	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	LRIT2	NM_001017924	exon3	c.T1203C	p.D401D	GGCTTCATCCGAT	.	79.0	29.0	60.0	0.0	.	81	.	.	Atlas-SNP
EBF3	253738	hgsc.bcm.edu	hg19	10	131761669	131761669	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	EBF3	NM_001005463	exon2	c.G253A	p.E85K	TCCTTTCAATCTC	.	88.0	34.0	78.0	0.0	.	193	.	.	Atlas-SNP
B4GALNT4	338707	hgsc.bcm.edu	hg19	11	377314	377314	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	B4GALNT4	NM_178537	exon14	c.G2191A	p.A731T	CTGAACGCGCGCC	.	74.0	6.0	68.0	0.0	.	83	.	.	Atlas-SNP
SAA2	6289	hgsc.bcm.edu	hg19	11	18266987	18266987	+	Silent	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	SAA2	NM_030754	exon4	c.A306G	p.K102K	GCCCCATTTATTG	.	143.0	29.0	135.0	0.0	.	22	.	.	Atlas-SNP
C11orf30	56946	hgsc.bcm.edu	hg19	11	76175034	76175034	+	Silent	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	C11orf30	NM_020193	exon7	c.C741T	p.S247S	GCAGAGCATTGCC	.	212.0	29.0	177.0	0.0	.	123	.	.	Atlas-SNP
KCNC2	3747	hgsc.bcm.edu	hg19	12	75601373	75601373	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	KCNC2	NM_139137	exon2	c.G391A	p.G131R	GCGGCCCGCACAC	.	694.0	227.0	583.0	1.0	.	239	.	.	Atlas-SNP
TBX5	6910	hgsc.bcm.edu	hg19	12	114793370	114793370	+	Silent	SNP	A	A	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TBX5	NM_000192	exon9	c.T1524G	p.V508V	CATGCCAACTCCG	.	121.0	44.0	93.0	0.0	.	188	.	.	Atlas-SNP
RNF17	56163	hgsc.bcm.edu	hg19	13	25433158	25433158	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	RNF17_ENST00000255324,NS,carcinoma,0,1	RNF17	NM_031277	exon26	c.G3630T	p.M1210I	AAAAATGACAAAT	.	135.0	26.0	113.0	0.0	.	259	.	.	Atlas-SNP
COL4A1	1282	hgsc.bcm.edu	hg19	13	110835346	110835346	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	COL4A1	NM_001845	exon28	c.C2089T	p.P697S	CTTTGGGGCCGGG	.	106.0	27.0	103.0	0.0	.	372	.	.	Atlas-SNP
PSMB5	5693	hgsc.bcm.edu	hg19	14	23504068	23504068	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	PSMB5	NM_001144932	exon1	c.A23G	p.E8G	GGTCTCTCCAACA	.	103.0	21.0	112.0	0.0	.	31	.	.	Atlas-SNP
SLC22A17	51310	hgsc.bcm.edu	hg19	14	23815958	23815958	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	SLC22A17	NM_020372	exon9	c.C1516T	p.R506W	CGTCCCGGAGCAC	.	61.0	12.0	82.0	0.0	.	32	.	.	Atlas-SNP
FOXG1	2290	hgsc.bcm.edu	hg19	14	29236983	29236983	+	Silent	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	FOXG1,arm,malignant_melanoma,0,1	FOXG1	NM_005249	exon1	c.G498A	p.G166G	GGACGGGGAGGGG	.	340.0	71.0	376.0	0.0	.	92	.	.	Atlas-SNP
EML5	161436	hgsc.bcm.edu	hg19	14	89153622	89153622	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	EML5	NM_183387	exon19	c.C2792A	p.S931Y	TCAAAAGAGTCAT	.	295.0	60.0	296.0	0.0	.	141	.	.	Atlas-SNP
RTL1	388015	hgsc.bcm.edu	hg19	14	101349210	101349210	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	RTL1	NM_001134888	exon1	c.T1916G	p.M639R	GTCAGCATGTCCT	.	81.0	27.0	79.0	0.0	.	120	.	.	Atlas-SNP
MYO1E	4643	hgsc.bcm.edu	hg19	15	59466403	59466403	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	MYO1E	NM_004998	exon20	c.G2086C	p.D696H	ACCCATCATACTT	.	73.0	18.0	78.0	0.0	.	99	.	.	Atlas-SNP
MCTP2	55784	hgsc.bcm.edu	hg19	15	94841718	94841718	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	MCTP2	NM_001159643	exon1	c.A224G	p.Y75C	CTTCCTACACCTC	.	65.0	12.0	71.0	0.0	.	122	.	.	Atlas-SNP
PKD1	5310	hgsc.bcm.edu	hg19	16	2140499	2140499	+	Silent	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	PKD1	NM_001009944	exon45	c.C12231T	p.A4077A	GGACTCGGCAGGA	.	90.0	4.0	113.0	0.0	.	184	.	.	Atlas-SNP
SRRM2	23524	hgsc.bcm.edu	hg19	16	2819139	2819139	+	Silent	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	SRRM2	NM_016333	exon12	c.C7875T	p.S2625S	CTCCTCCTCTTCT	.	69.0	4.0	56.0	0.0	.	263	.	.	Atlas-SNP
GLG1	2734	hgsc.bcm.edu	hg19	16	74524981	74524981	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	GLG1	NM_001145667	exon8	c.A1367T	p.H456L	TTTCGATGTAATC	.	190.0	10.0	166.0	0.0	.	106	.	.	Atlas-SNP
OR1A1	8383	hgsc.bcm.edu	hg19	17	3118953	3118953	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	OR1A1	NM_014565	exon1	c.C39G	p.I13M	ATTCATCCTCCTG	.	73.0	17.0	99.0	0.0	.	54	.	.	Atlas-SNP
COL1A1	1277	hgsc.bcm.edu	hg19	17	48263287	48263287	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	COL1A1	NM_000088	exon50	c.C4100T	p.T1367I	TGGTAGGTGATGT	.	85.0	16.0	90.0	0.0	.	158	.	.	Atlas-SNP
CEP112	201134	hgsc.bcm.edu	hg19	17	63685338	63685338	+	Splice_Site	SNP	T	T	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	CEP112	NM_001037325	exon5	c.376-2A>T	.	AAAACCTGAAACG	.	110.0	24.0	83.0	0.0	.	192	.	.	Atlas-SNP
DSC1	1823	hgsc.bcm.edu	hg19	18	28720139	28720139	+	Silent	SNP	A	A	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	DSC1	NM_004948	exon10	c.T1386A	p.I462I	GTCTATAATTTTA	.	126.0	21.0	109.0	0.0	.	240	.	.	Atlas-SNP
DPP9	91039	hgsc.bcm.edu	hg19	19	4682753	4682753	+	Missense_Mutation	SNP	T	T	C	rs376453990		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	DPP9	NM_139159	exon20	c.A2429G	p.Y810C	GCCTCATAGCCGT	.	70.0	17.0	81.0	0.0	.	59	.	.	Atlas-SNP
MUC16	94025	hgsc.bcm.edu	hg19	19	9063485	9063485	+	Silent	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	MUC16	NM_024690	exon3	c.C23961A	p.S7987S	TGTGGAGGAAACA	.	116.0	23.0	104.0	0.0	.	4315	.	.	Atlas-SNP
TSPAN16	26526	hgsc.bcm.edu	hg19	19	11411928	11411928	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TSPAN16	NM_012466	exon4	c.A394T	p.R132X	AATTACAGAGGTT	.	162.0	30.0	143.0	0.0	.	22	.	.	Atlas-SNP
TSPAN16	26526	hgsc.bcm.edu	hg19	19	11411929	11411929	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TSPAN16	NM_012466	exon4	c.G395T	p.R132I	ATTACAGAGGTTA	.	160.0	31.0	144.0	0.0	.	22	.	.	Atlas-SNP
TSPAN16	26526	hgsc.bcm.edu	hg19	19	11411930	11411930	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TSPAN16	NM_012466	exon4	c.A396T	p.R132S	TTACAGAGGTTAC	.	160.0	31.0	145.0	0.0	.	22	.	.	Atlas-SNP
ZC3H4	23211	hgsc.bcm.edu	hg19	19	47575379	47575379	+	Splice_Site	SNP	C	C	G	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ZC3H4	NM_015168	exon14	c.1803-1G>C	.	GGGAACCTAGAAG	.	34.0	12.0	37.0	0.0	.	96	.	.	Atlas-SNP
ZNF836	162962	hgsc.bcm.edu	hg19	19	52659296	52659296	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ZNF836	NM_001102657	exon5	c.T1640A	p.I547N	GTATGAATTCTTA	.	137.0	29.0	141.0	0.0	.	158	.	.	Atlas-SNP
USP29	57663	hgsc.bcm.edu	hg19	19	57641665	57641665	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	USP29	NM_020903	exon4	c.G1622A	p.C541Y	CTTATTGCAATGA	.	97.0	23.0	100.0	0.0	.	186	.	.	Atlas-SNP
RSPH1	89765	hgsc.bcm.edu	hg19	21	43912902	43912902	+	Silent	SNP	G	G	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	RSPH1	NM_080860	exon3	c.C240A	p.G80G	AAAAGTGCCTTGA	.	90.0	5.0	86.0	0.0	.	36	.	.	Atlas-SNP
TMPRSS6	164656	hgsc.bcm.edu	hg19	22	37482384	37482384	+	Silent	SNP	C	C	T	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	TMPRSS6	NM_153609	exon8	c.G939A	p.K313K	GCCCTTCTTCCAG	.	296.0	71.0	264.0	0.0	.	99	.	.	Atlas-SNP
EP300	2033	hgsc.bcm.edu	hg19	22	41574171	41574171	+	Silent	SNP	G	G	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	EP300	NM_001429	exon31	c.G6456A	p.Q2152Q	ACAGCAGCAACTC	.	153.0	36.0	174.0	0.0	.	367	.	.	Atlas-SNP
FAM47A	158724	hgsc.bcm.edu	hg19	X	34148187	34148187	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	FAM47A	NM_203408	exon1	c.A2209G	p.I737V	AGGCAATTGGTCC	.	167.0	62.0	191.0	0.0	.	249	.	.	Atlas-SNP
OCRL	4952	hgsc.bcm.edu	hg19	X	128694557	128694557	+	Silent	SNP	C	C	A	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	OCRL	NM_000276	exon9	c.C753A	p.G251G	GAATGGCCAGTCT	.	91.0	26.0	54.0	0.0	.	117	.	.	Atlas-SNP
SUPT20HL1	100130302	hgsc.bcm.edu	hg19	X	24382417	24382418	+	In_Frame_Ins	INS	-	-	CTGCTGCTC	rs72220486	alternate_allele	TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	.	NM_001136234	exon1	c.1540_1541insCTGCTGCTC	p.A514delinsAAAP	.	.	85.0	38.0	59.0	0.0	.	.	.	.	Atlas-INDEL
ZBTB1	22890	hgsc.bcm.edu	hg19	14	64988788	64988796	+	In_Frame_Del	DEL	TATTTGATG	TATTTGATG	-	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	TATTTGATG	TATTTGATG	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ZBTB1	NM_001123329	exon2	c.565_573del	p.189_191del	.	.	191.0	28.0	184.0	0.0	.	93	.	.	Atlas-Indel,Pindel
ARID1A	8289	hgsc.bcm.edu	hg19	1	27102134	27102134	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ARID1A	NM_006015	exon19	c.5059delG	p.A1687fs	.	.	112.0	22.0	70.0	0.0	.	842	.	.	Atlas-Indel,Pindel
ZC3H12A	80149	hgsc.bcm.edu	hg19	1	37947212	37947212	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	ZC3H12A	NM_025079	exon4	c.593delT	p.I198fs	.	.	75.0	12.0	101.0	0.0	.	58	.	.	Atlas-Indel,Pindel
MAN2C1	4123	hgsc.bcm.edu	hg19	15	75660853	75660889	+	Frame_Shift_Del	DEL	GAGCGGCGACACGAACTTCTCCACCCGCTCCAGCGTG	GAGCGGCGACACGAACTTCTCCACCCGCTCCAGCGTG	-	novel		TCGA-2V-A95S-01A-11D-A36X-10	TCGA-2V-A95S-10D-01D-A370-10	GAGCGGCGACACGAACTTCTCCACCCGCTCCAGCGTG	GAGCGGCGACACGAACTTCTCCACCCGCTCCAGCGTG	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	163604c4-1a54-4072-9821-38e000866920	2143f2ba-4527-449c-975d-fbeff27126ca	.	MAN2C1	NM_001256494	exon1	c.37_73del	p.13_25del	.	.	176.0	26.0	237.0	0.0	.	76	.	.	Atlas-Indel,Pindel