Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq
ABCB1	5243	broad.mit.edu;ucsc.edu;mdanderson.org	37	7	87170675	87170675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ABCB1	NM_000927	exon19	c.C2317A	p.Q773K	TTACCTGAAGGAA	.	24.0	4.0	16.0	0.0	.	582
ABCB4	5244	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	87051507	87051507	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ABCB4	NM_018850	exon18	c.A2246T	p.Q749L	CACTTCTGCTGCT	.	543.0	80.0	249.0	1.0	.	96
AGFG1	3267	broad.mit.edu;bcgsc.ca	37	2	228389469	228389487	+	Frame_Shift_Del	DEL	GGTTTGTAGTCCCCAGTTG	GGTTTGTAGTCCCCAGTTG	-	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	GGTTTGTAGTCCCCAGTTG	GGTTTGTAGTCCCCAGTTG	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	AGFG1	NM_004504	exon5	c.541_550del	p.181_184del	ATATGTGGTTTGT	.	74.0	9.0	73.0	0.0	.	228
ANKRD30A	91074	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	10	37442511	37442511	+	Silent	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ANKRD30A	NM_052997	exon13	c.G1551A	p.E517E	CTGTGAGACTGTT	.	900.0	66.0	886.0	0.0	.	161
ARHGEF6	9459	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	135863020	135863020	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ARHGEF6	NM_004840	exon1	c.G22A	p.V8M	ATGTCACGATTTG	.	36.0	25.0	41.0	0.0	.	227
ARHGEF7	8874	broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	111811416	111811416	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ARHGEF7	NM_001113511	exon3	c.A295G	p.T99A	GTAACCACCATTC	.	109.0	40.0	136.0	2.0	.	232
ARID3A	1820	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	932472	932472	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ARID3A	NM_005224	exon3	c.G423C	p.E141D	TGAGGAGGAGGAG	.	59.0	13.0	53.0	0.0	.	90
ARID5B	84159	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	63851583	63851583	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ARID5B	NM_032199	exon10	c.C2361A	p.S787R	CTGCAGCTTCTCC	.	96.0	16.0	98.0	0.0	.	94
BEND3	57673	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	107391665	107391665	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	BEND3	NM_001080450	exon5	c.C730T	p.P244S	ACTCAGGGGGCGG	.	145.0	72.0	136.0	1.0	.	71
BRCA2	675	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	32914479	32914479	+	Missense_Mutation	SNP	C	C	G	rs80358834	alternate_allele	TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	BRCA2	NM_000059	exon11	c.C5987G	p.A1996G	AAAACGCAAGACA	.	56.0	22.0	66.0	0.0	.	3153
C17orf64	124773	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	58503178	58503178	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	C17orf64	NM_181707	exon2	c.G86A	p.S29N	GCTCCAGCGCCAG	.	92.0	29.0	88.0	1.0	.	271
C1orf110	339512	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	162824806	162824806	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	.	NM_178550	exon4	c.G658T	p.G220W	TGTTCCCATCTGG	.	258.0	28.0	247.0	0.0	.	.
C20orf196	149840	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	5843711	5843711	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	C20orf196	NM_152504	exon3	c.G220A	p.A74T	TGGACCGCTGAGA	.	90.0	9.0	79.0	0.0	.	90
C5orf42	65250	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	37176032	37176032	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	C5orf42	NM_023073	exon31	c.A5957G	p.D1986G	CTCGTATCTACTT	.	141.0	21.0	82.0	0.0	.	94
CACNA1E	777	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	181725193	181725193	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CACNA1E	NM_001205293	exon29	c.4091delC	p.T1364fs	TGCTGACCCTCTT	.	163.0	62.0	150.0	0.0	.	95
CAND2	23066	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	12859283	12859283	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CAND2	NM_001162499	exon10	c.G2852T	p.G951V	AGGAGGGCACCCG	.	68.0	10.0	90.0	0.0	.	72
CELSR1	9620	broad.mit.edu;bcgsc.ca	37	22	46772959	46772959	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CELSR1	NM_014246	exon24	c.C7583T	p.P2528L	CATACCGGGTTTT	.	59.0	28.0	77.0	1.0	.	525
CHUK	1147	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	101953098	101953098	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CHUK	NM_001278	exon19	c.G2065A	p.E689K	CATGTTCTGCTGA	.	119.0	24.0	115.0	0.0	.	961
CLEC16A	23274	ucsc.edu;bcgsc.ca;mdanderson.org	37	16	11114147	11114147	+	Silent	SNP	C	C	T	rs80034801	byfrequency	TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CLEC16A	NM_015226	exon11	c.C1401T	p.A467A	AAGCGCCGCCGCC	.	187.0	72.0	154.0	1.0	C|0.989;T|0.011	92
CLPTM1	1209	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	45488541	45488541	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CLPTM1	NM_001294	exon6	c.G652A	p.A218T	ACAGAAGCGGACC	.	100.0	27.0	115.0	0.0	.	91
CLTC	1213	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	57754422	57754422	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CLTC	NM_004859	exon17	c.C2669T	p.P890L	ACAACCCGGAGAG	.	105.0	37.0	107.0	1.0	.	835
CRBN	51185	broad.mit.edu;bcgsc.ca	37	3	3221334	3221334	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CRBN	NM_001173482	exon1	c.A38G	p.N13S	CCCATGTTGTGCG	.	182.0	69.0	166.0	2.0	.	91
CRNN	49860	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	152382192	152382192	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CRNN	NM_016190	exon3	c.G1366C	p.D456H	CCTGGTCCAGCCT	.	321.0	33.0	225.0	0.0	.	93
CTU2	348180	ucsc.edu;bcgsc.ca	37	16	88780118	88780118	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CTU2	NM_001012759	exon9	c.A937G	p.K313E	ACCCTGAAGGAGG	.	168.0	65.0	169.0	2.0	.	23
CWF19L1	55280	ucsc.edu;bcgsc.ca	37	10	101996663	101996663	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	CWF19L1	NM_018294	exon12	c.G1318A	p.A440T	CCTGTGCCTGGGT	.	172.0	19.0	187.0	2.0	.	90
DCHS1	8642	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	6650989	6650989	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	DCHS1	NM_003737	exon11	c.A4949G	p.Q1650R	TGCTGCTGGAAAG	.	66.0	9.0	58.0	0.0	.	73
DEDD	9191	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	161091967	161091967	+	Silent	SNP	C	C	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	DEDD	NM_001039711	exon5	c.G927C	p.L309L	GTTCCTCAGGAGT	.	212.0	69.0	220.0	1.0	.	90
DHX9	1660	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	182852766	182852766	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	DHX9	NM_001357	exon26	c.G3256A	p.D1086N	GTAGATGACTGGT	.	111.0	31.0	118.0	1.0	.	92
DISC1	27185	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	231858293	231858293	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	DISC1	NM_001164550	exon5	c.A1252G	p.N418D	GGAACCAATTGCT	.	125.0	12.0	121.0	0.0	.	91
ECEL1	9427	ucsc.edu;bcgsc.ca	37	2	233348748	233348748	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ECEL1	NM_004826	exon7	c.T1370A	p.F457Y	TGTACAAAGAGGG	.	439.0	152.0	378.0	2.0	.	90
ENKD1	84080	ucsc.edu;bcgsc.ca	37	16	67697652	67697652	+	Silent	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	.	NM_032140	exon5	c.C651T	p.S217S	TGAGCAGGAATGC	.	130.0	44.0	148.0	2.0	.	.
EP400	57634	hgsc.bcm.edu;broad.mit.edu	37	12	132547099	132547099	+	Silent	SNP	G	G	A	rs145603866	byfrequency	TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	EP400	NM_015409	exon47	c.G8187A	p.Q2729Q	ACAGCAGCAGCAG	.	202.0	14.0	173.0	0.0	G|0.997;A|0.003	520
FAM205A	259308	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	34724216	34724216	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	.	NM_001141917	exon4	c.G3021C	p.M1007I	ACAAGGCATGTGG	.	314.0	79.0	225.0	1.0	.	.
FAT3	120114	ucsc.edu;mdanderson.org	37	11	92531022	92531022	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	FAT3	NM_001008781	exon9	c.A4843T	p.K1615X	ATGTTTAAGATCG	.	177.0	42.0	212.0	2.0	.	73
FN1	2335	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	216249663	216249663	+	Missense_Mutation	SNP	G	G	T	rs202245868	alternate_allele	TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	FN1	NM_212482	exon29	c.C4649A	p.A1550E	GGGGTCGCAGCAA	.	348.0	42.0	377.0	0.0	G|0.999;A|0.000	584
GALNT12	79695	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	101608380	101608380	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	GALNT12	NM_024642	exon9	c.A1580G	p.E527G	CCCCAGAGAATCA	.	252.0	44.0	257.0	0.0	.	92
GLYATL1	92292	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	58722261	58722261	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	GLYATL1	NM_080661	exon5	c.G298A	p.D100N	GACATGGATTCAT	.	150.0	35.0	225.0	0.0	.	91
GPRC6A	222545	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	117113958	117113958	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	GPRC6A	NM_148963	exon6	c.A2128G	p.T710A	TGCAAGTGAAGAT	.	103.0	15.0	110.0	0.0	.	96
GREB1	9687	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	11752722	11752722	+	Silent	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	GREB1	NM_014668	exon19	c.G3108A	p.G1036G	GCATGGGGAGTCC	.	174.0	39.0	199.0	1.0	.	91
HPSE	10855	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	84222134	84222134	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	HPSE	NM_001098540	exon11	c.G1451A	p.G484E	TGAGGTCCCAAAG	.	70.0	15.0	88.0	0.0	.	227
KIAA1211	57482	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	4	57181429	57181429	+	Silent	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	KIAA1211	NM_020722	exon8	c.G1761A	p.S587S	ACCGTCGTCCCTG	.	32.0	14.0	24.0	0.0	.	70
KIAA1211	57482	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	57164398	57164398	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	KIAA1211	NM_020722	exon4	c.G3A	p.M1I	TTCTATGGGAACC	.	64.0	12.0	84.0	0.0	.	70
KIF16B	55614	broad.mit.edu;bcgsc.ca	37	20	16410519	16410523	+	Frame_Shift_Del	DEL	ATAAG	ATAAG	-	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	ATAAG	ATAAG	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	KIF16B	NM_001199865	exon13	c.1407_1411del	p.469_471del	AATGATATAAGAT	.	21.0	7.0	26.0	0.0	.	291
KLRC4-KLRK1	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	10531200	10531200	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	.	NM_001199805	exon11	c.A382G	p.M128V	GAGACATACAAGA	.	60.0	23.0	93.0	0.0	.	.
LAMTOR5	10542	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	110950487	110950487	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	.	NM_006402	exon1	c.T2C	p.M1T	GGCTCCATGGCGG	.	132.0	28.0	137.0	0.0	.	.
LHCGR	3973	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	48925801	48925801	+	Silent	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	LHCGR	NM_000233	exon9	c.G819A	p.L273L	GTAAGTCAACGTG	.	64.0	5.0	74.0	0.0	.	589
LMO7	4008	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	76381696	76381696	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	LMO7	NM_015842	exon7	c.C578A	p.T193N	ATCCCACTTCTGG	.	84.0	39.0	86.0	0.0	.	586
LPHN1	22859	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	14274081	14274081	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	LPHN1	NM_001008701	exon6	c.C547T	p.R183C	CCGTGCGGTAGGG	.	160.0	37.0	134.0	0.0	.	523
LPHN3	23284	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	62599267	62599267	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	LPHN3	NM_015236	exon5	c.G1190T	p.R397I	ATAGTAGATCAGG	.	113.0	13.0	142.0	0.0	.	508
LRIT1	26103	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	86001094	86001094	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	LRIT1	NM_015613	exon1	c.G102T	p.M34I	ATCACCCATGATA	.	181.0	70.0	153.0	0.0	.	90
MAN2C1	4123	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	75652525	75652525	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	MAN2C1	NM_001256494	exon14	c.C1612T	p.R538W	GGATCCGCTCACA	.	72.0	30.0	101.0	1.0	.	90
MAP2	4133	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	210574887	210574887	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	MAP2	NM_002374	exon12	c.G4982A	p.R1661Q	AGCTTCGGCTTAT	.	150.0	21.0	171.0	1.0	.	591
METTL21C	196541	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	13	103339396	103339396	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	METTL21C	NM_001010977	exon3	c.294delG	p.L98fs	TTGACACAAAGCC	.	67.0	10.0	74.0	0.0	.	90
MMP2	4313	broad.mit.edu;bcgsc.ca	37	16	55513476	55513476	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	MMP2	NM_004530	exon1	c.G85A	p.A29T	GCCGCCGCCGCGC	.	68.0	5.0	74.0	1.0	.	1149
MON2	23041	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	12	62926222	62926222	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	MON2	NM_015026	exon12	c.G1405T	p.E469X	AGCTTAGAAATGT	.	124.0	19.0	122.0	0.0	.	514
MRPL32	64983	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	7	42976921	42976921	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	MRPL32	NM_031903	exon3	c.A313G	p.N105D	TTAAAGAACAACA	.	251.0	67.0	167.0	0.0	.	90
MUC16	94025	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	9060557	9060557	+	Silent	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	MUC16	NM_024690	exon3	c.C26889T	p.S8963S	CACTTTGGATGGC	.	305.0	65.0	308.0	0.0	.	566
MYH15	22989	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	108127246	108127246	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	MYH15	NM_014981	exon33	c.A4561C	p.I1521L	TAGAAATCTCTTC	.	108.0	25.0	88.0	0.0	.	73
MYOM1	8736	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	3083787	3083787	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	MYOM1	NM_003803	exon33	c.A4484T	p.N1495I	ACTTACTTGTGGG	.	63.0	9.0	41.0	0.0	.	94
OCA2	4948	broad.mit.edu;ucsc.edu	37	15	28230305	28230305	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	OCA2	NM_000275	exon13	c.G1269A	p.W423X	CATGGCCCACACC	.	126.0	58.0	146.0	1.0	.	135
OR51G1	79324	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	4945247	4945247	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	OR51G1	NM_001005237	exon1	c.C323A	p.T108N	GACAAGGTGTGGA	.	88.0	42.0	100.0	1.0	.	70
OTUD5	55593	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	X	48814825	48814825	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	OTUD5	NM_001136157	exon1	c.T8C	p.I3T	GGGAGTATAGTCA	.	55.0	43.0	47.0	0.0	.	541
PCDH17	27253	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	58206732	58206732	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	PCDH17	NM_001040429	exon1	c.C52A	p.L18I	CTCACTCTCAAGA	.	98.0	23.0	103.0	0.0	.	97
PCDHGA5	56110	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140745937	140745937	+	Silent	SNP	C	C	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	PCDHGA5	NM_032054	exon1	c.C2040A	p.T680T	CAAGACCCCCATT	.	191.0	40.0	174.0	0.0	.	35
PI4KA	5297	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	21153477	21153477	+	Silent	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	PI4KA	NM_058004	exon16	c.C1908T	p.P636P	CAGAATGGGCTCC	.	64.0	17.0	60.0	0.0	.	454
PKP1	5317	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	201291111	201291111	+	Silent	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	PKP1	NM_000299	exon9	c.G1416A	p.V472V	GTCTGTGGAAAAC	.	113.0	18.0	119.0	0.0	.	92
PRRC2B	84726	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	134363453	134363453	+	Silent	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	PRRC2B	NM_013318	exon27	c.C6195T	p.A2065A	GGGTGCCTCCCAG	.	113.0	14.0	108.0	0.0	.	24
PSG8	440533	ucsc.edu;bcgsc.ca	37	19	43259369	43259369	+	Silent	SNP	C	C	T	rs144938138	alternate_allele	TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	PSG8	NM_001130167	exon4	c.G759A	p.E253E	CTTATTCTCCCTG	.	121.0	36.0	132.0	2.0	C|1.000;G|0.000	90
PTPRM	5797	broad.mit.edu;ucsc.edu;bcgsc.ca	37	18	8143667	8143667	+	Silent	SNP	C	C	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	PTPRM	NM_001105244	exon14	c.C2190G	p.V730V	ACCAGTCCCAGAA	.	128.0	73.0	146.0	2.0	.	228
PTPRN2	5799	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	157959802	157959802	+	Missense_Mutation	SNP	G	G	A	rs139278439	alternate_allele	TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	PTPRN2	NM_130843	exon6	c.C731T	p.A244V	AGGGCCGCCATCA	.	78.0	34.0	65.0	0.0	G|0.999;T|0.000	295
PTPRT	11122	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	40980875	40980875	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	PTPRT	NM_007050	exon10	c.C1611G	p.S537R	CCTCTGGCTCGAG	.	86.0	15.0	101.0	0.0	.	664
RALYL	138046	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	85799990	85799990	+	Silent	SNP	T	T	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	RALYL	NM_001100391	exon8	c.T876C	p.D292D	CTTCGATGAAGAT	.	229.0	37.0	109.0	1.0	.	23
RALYL	138046	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	85799965	85799965	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	RALYL	NM_001100391	exon8	c.C851T	p.T284I	AGATGACAGATGG	.	278.0	18.0	135.0	0.0	.	23
ROR1	4919	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	64624861	64624861	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ROR1	NM_005012	exon8	c.G1372T	p.A458S	CTGAATGCATATA	.	97.0	43.0	120.0	1.0	.	1536
SACM1L	22908	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	45754687	45754687	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	SACM1L	NM_014016	exon6	c.A542T	p.E181V	AGCCAGAGGTAAT	.	18.0	7.0	21.0	0.0	.	91
SATB1	6304	ucsc.edu;bcgsc.ca	37	3	18390856	18390856	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	SATB1	NM_001195470	exon12	c.C2194G	p.L732V	GCTTGAGATAGTA	.	183.0	31.0	175.0	2.0	.	228
SCN8A	6334	broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	52115518	52115518	+	Silent	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	SCN8A	NM_014191	exon12	c.C1824T	p.R608R	GGCCCGCGAGCGC	.	15.0	9.0	20.0	0.0	.	29
SETD1B	23067	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	122252796	122252796	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	SETD1B	NM_015048	exon6	c.C2675T	p.A892V	TCCGGGCCTTTGA	.	119.0	30.0	130.0	0.0	.	86
SLC14A1	6563	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	18	43310324	43310324	+	Silent	SNP	C	C	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	SLC14A1	NM_001146037	exon2	c.C207A	p.P69P	CAGCCCCACTATG	.	165.0	12.0	104.0	0.0	.	515
SLC35F2	54733	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	107663412	107663412	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	SLC35F2	NM_017515	exon8	c.A1054G	p.S352G	CAATGCTGGTGAC	.	79.0	20.0	120.0	0.0	.	90
SPAG17	200162	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	118629516	118629516	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	SPAG17	NM_206996	exon11	c.G1475T	p.C492F	GAGAGACAGAGTG	.	125.0	25.0	177.0	0.0	.	158
ST8SIA4	7903	ucsc.edu;bcgsc.ca	37	5	100191909	100191909	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ST8SIA4	NM_005668	exon4	c.G695T	p.G232V	TCTCCTCCTTTGA	.	144.0	56.0	214.0	2.0	.	153
STRADA	92335	broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	61791458	61791458	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	STRADA	NM_001003787	exon5	c.C134T	p.A45V	GAGCTCGCATCAT	.	132.0	64.0	106.0	1.0	.	547
TACR3	6870	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	4	104511152	104511152	+	Splice_Site	SNP	C	C	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	TACR3	NM_001059	exon6	c.1086-1G>C	.	CGAAATCTGAGGA	.	77.0	14.0	105.0	0.0	.	525
TARS2	80222	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	150461451	150461451	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	TARS2	NM_001271896	exon3	c.C275G	p.A92G	CACTGGCAGATAC	.	101.0	17.0	72.0	0.0	.	91
TEAD1	7003	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	12958680	12958680	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	TEAD1	NM_021961	exon13	c.G1192A	p.E398K	ACACAAGAAACTC	.	152.0	23.0	160.0	0.0	.	90
TLR4	7099	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	120475751	120475751	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	TLR4	NM_138554	exon3	c.C1345T	p.L449F	AGAAACCTCATTT	.	83.0	11.0	123.0	0.0	.	577
TMEM2	23670	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	74355033	74355033	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	TMEM2	NM_001135820	exon5	c.T1150C	p.Y384H	CAGTATAAAATTC	.	85.0	21.0	88.0	0.0	.	92
TOX	9760	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	59750851	59750851	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	TOX	NM_014729	exon5	c.G713A	p.R238Q	GCAGGCCGCTTCT	.	37.0	5.0	22.0	0.0	.	227
TP53	7157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	7577082	7577082	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	TP53,NS,carcinoma,0	TP53	NM_000546	exon8	c.G856A	p.E286K	TCTCTTCCTCTGT	.	107.0	66.0	91.0	1.0	.	70225
TRAM1L1	133022	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	118005773	118005789	+	Frame_Shift_Del	DEL	CAAGATAAACACAATGG	CAAGATAAACACAATGG	-	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	CAAGATAAACACAATGG	CAAGATAAACACAATGG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	TRAM1L1	NM_152402	exon1	c.761_777del	p.254_259del	TCTACCCAAGATA	.	60.0	14.0	116.0	0.0	.	90
TRH	7200	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	129695783	129695783	+	Silent	SNP	G	G	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	TRH	NM_007117	exon3	c.G453T	p.R151R	GAAGCGGCAGCAC	.	142.0	50.0	131.0	1.0	.	91
TRIP11	9321	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	92470462	92470462	+	Silent	SNP	C	C	T	rs35798420	byfrequency	TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	TRIP11	NM_004239	exon11	c.G3858A	p.Q1286Q	TAATTCCTGCCCA	.	69.0	18.0	121.0	0.0	C|0.996;T|0.004	1400
TXNDC2	84203	hgsc.bcm.edu;broad.mit.edu	37	18	9887134	9887134	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	TXNDC2	NM_001098529	exon2	c.A658T	p.K220X	CAGCCCAAGCTGG	.	143.0	7.0	142.0	0.0	.	92
UBAC2	337867	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	100020041	100020041	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	UBAC2	NM_001144072	exon8	c.G808A	p.G270R	TTTTAGGGAGGAA	.	142.0	45.0	153.0	0.0	.	91
USH2A	7399	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	216373074	216373074	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	USH2A	NM_007123	exon17	c.G3706C	p.V1236L	TGGTCACTGTAAT	.	99.0	41.0	108.0	1.0	.	115
USH2A	7399	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	216173842	216173842	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	USH2A	NM_206933	exon33	c.A6388G	p.N2130D	AACTGTTTGTACA	.	174.0	22.0	161.0	1.0	.	115
VEZF1	7716	hgsc.bcm.edu;ucsc.edu	37	17	56056622	56056622	+	Silent	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	VEZF1	NM_007146	exon5	c.G1029A	p.Q343Q	CTGCTGCTGCTGC	.	244.0	34.0	189.0	0.0	.	136
VN1R4	317703	broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	53770602	53770602	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	VN1R4	NM_173857	exon1	c.T317G	p.V106G	GTGATCACCTGGA	.	334.0	42.0	340.0	1.0	.	92
ZBTB43	23099	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	129595854	129595854	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ZBTB43	NM_001135776	exon2	c.G1066A	p.G356R	GTAACAGGGATTA	.	55.0	14.0	55.0	1.0	.	91
ZNF214	7761	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	7021610	7021610	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ZNF214	NM_013249	exon3	c.T1304A	p.V435E	GTATGCACTCTCT	.	100.0	30.0	118.0	1.0	.	91
ZNF280B	140883	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	22843682	22843682	+	Silent	SNP	C	C	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ZNF280B	NM_080764	exon4	c.G42A	p.Q14Q	GTTCTTCTGTGGT	.	293.0	45.0	316.0	0.0	.	70
ZNF43	7594	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	22002022	22002022	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ZNF43	NM_001256653	exon2	c.G32T	p.G11V	AATGGTCCCTAAA	.	118.0	48.0	122.0	2.0	.	154
ZNF727	442319	broad.mit.edu;bcgsc.ca	37	7	63538068	63538068	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	.	NM_001159522	exon4	c.A641T	p.N214I	TCTCAAACCTTAC	.	80.0	52.0	65.0	1.0	.	.
ZNF791	163049	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	12739344	12739344	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	ZNF791	NM_153358	exon4	c.G1001A	p.G334E	AATGTGGGAAATC	.	52.0	20.0	38.0	0.0	.	92
THEMIS	387357	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	128135050	128135051	+	Missense_Mutation	DNP	GG	GG	TT	novel		TCGA-FV-A4ZP-01A-12D-A25V-10	TCGA-FV-A4ZP-11A-12D-A25V-10	GG	GG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	34a92167-000d-4968-bfc4-0a818857cbd4	d898cddf-8721-4cee-8a60-926c4c0dfc7c	.	.	.	.	.	p.P246T	GACTGGGGAGGAT	.	63.0	16.0	80.0	0.0	.	.