Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene TranscriptID Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq A2M 2 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 9258835 9258835 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb A2M,brain,glioma,-2 A2M NM_000014 exon10 c.G1101A p.G367G CACCTGCCCAAAG . 107.0 12.0 82.0 0.0 . 515 ABCA4 24 broad.mit.edu;mdanderson.org 37 1 94495183 94495183 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ABCA4 NM_000350 exon30 c.T4357A p.Y1453N AGGGGTACTCCCT . 30.0 5.0 56.0 0.0 . 162 ABCA9 10350 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 67031425 67031425 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ABCA9 NM_080283 exon8 c.C1090T p.L364F TAAGAAGACACAA . 315.0 38.0 286.0 1.0 . 95 ABCC8 6833 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 17449458 17449458 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ABCC8 NM_000352 exon15 c.A2072T p.D691V ATTCCATCTGGGG . 148.0 19.0 144.0 1.0 . 91 ACBD5 91452 broad.mit.edu;ucsc.edu;mdanderson.org 37 10 27486370 27486370 + Nonsense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ACBD5 NM_145698 exon13 c.A1567T p.K523X TCAGTTTTCTTTA . 263.0 105.0 178.0 1.0 . 90 ACE 1636 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 61573828 61573828 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ACE NM_000789 exon23 c.C3454T p.L1152L GGCCCCCTGCACA . 335.0 198.0 339.0 1.0 . 94 ACTR10 55860 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 58690343 58690343 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ACTR10 NM_018477 exon9 c.G638A p.R213H AAGCGCGTACTTG . 65.0 20.0 65.0 0.0 . 90 ADAMTS18 170692 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 77398168 77398168 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ADAMTS18 NM_199355 exon5 c.A889G p.T297A CGAGGGTTTCCAC . 218.0 51.0 222.0 0.0 . 1036 ADAMTS9 56999 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 64640083 64640083 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ADAMTS9 NM_182920 exon8 c.G1262A p.S421N TCTTCACTAATAG . 176.0 31.0 192.0 0.0 . 230 ADCY2 108 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 7743819 7743819 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ADCY2 NM_020546 exon15 c.T1910C p.L637P CGTTTCTCTTGCT . 250.0 47.0 260.0 0.0 . 97 ADORA2B 136 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 15878262 15878262 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ADORA2B NM_000676 exon2 c.A605G p.Y202C TGATCTACATTAA . 165.0 102.0 189.0 1.0 . 228 AFF3 3899 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 100194857 100194857 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . AFF3 NM_001025108 exon17 c.G2925A p.T975T CGGCTTCGTCTGC . 204.0 66.0 135.0 0.0 . 230 AHNAK2 113146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 105414859 105414859 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . AHNAK2 NM_138420 exon7 c.A6929G p.D2310G GTCACGTCCTTGT . 122.0 28.0 159.0 0.0 . 47 AHNAK 79026 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 62290481 62290481 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . AHNAK NM_001620 exon5 c.A11408G p.K3803R GGCATCTTCAGGT . 209.0 41.0 140.0 0.0 . 109 AIM1 202 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 106987360 106987360 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . AIM1 NM_001624 exon7 c.G3577A p.D1193N TTCTGGGATACAG . 176.0 22.0 133.0 0.0 . 139 AIRE 326 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 45709596 45709596 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . AIRE NM_000383 exon6 c.G709A p.E237K AAGTTCGAAGACT . 132.0 27.0 159.0 1.0 . 91 ALG9 79796 hgsc.bcm.edu;mdanderson.org 37 11 111740961 111740961 + Nonsense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ALG9 NM_001077690 exon3 c.G264A p.W88X TGGCTCCCAGTAG . 113.0 20.0 97.0 0.0 . 91 AMER2 219287 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 25743926 25743926 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_152704 exon1 c.G1832C p.S611T TTGATGCTAATAG . 257.0 59.0 366.0 0.0 . . ANKRA2 57763 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 72857022 72857022 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ANKRA2 NM_023039 exon3 c.A381G p.K127K TGACTGTTTTATG . 241.0 25.0 216.0 0.0 . 90 ANKRD12 23253 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 9254383 9254383 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ANKRD12 NM_015208 exon9 c.A1118G p.K373R TTAATAAGATGAT . 95.0 10.0 105.0 0.0 . 92 ANKRD30A 91074 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 37507997 37507997 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ANKRD30A NM_052997 exon34 c.C3189T p.A1063A AATAGCCACACTG . 203.0 65.0 174.0 0.0 . 161 AP3B1 8546 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 77409598 77409598 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . AP3B1 NM_003664 exon19 c.A2227G p.N743D TTGAGTTCCTCTT . 66.0 16.0 84.0 0.0 . 90 ARHGAP24 83478 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 86852134 86852134 + Silent SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ARHGAP24 NM_031305 exon1 c.A51T p.S17S AGCCTCAACTCCT . 96.0 21.0 159.0 0.0 . 227 ARL13A 392509 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 100240896 100240896 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ARL13A NM_001162490 exon4 c.C371A p.P124H GGAAACCCATCTT . 53.0 12.0 65.0 0.0 . 131 ARL5C 390790 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 37321340 37321340 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ARL5C NM_001143968 exon2 c.C99T p.L33L CCGGTAGAGAATG . 153.0 16.0 156.0 0.0 . 68 ASB5 140458 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 177190077 177190077 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ASB5 NM_080874 exon1 c.A183G p.V61V TTGGGTTACTCCA . 91.0 14.0 120.0 0.0 . 228 ASCC3 10973 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 100960788 100960788 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ASCC3 NM_006828 exon40 c.A6082T p.N2028Y AGAAATTCCATGC . 118.0 17.0 74.0 0.0 . 96 ATP1A4 480 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 160141549 160141549 + Splice_Site SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ATP1A4 NM_144699 exon12 c.1854+2T>C . TTAAGGTAAATAC . 96.0 12.0 42.0 0.0 . 94 BAHCC1 57597 ucsc.edu;bcgsc.ca 37 17 79424536 79424536 + Silent SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . BAHCC1 . . . . GGCCGTGCTGGGG . 46.0 9.0 53.0 0.0 . 23 BAP1 8314 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 52441334 52441334 + Splice_Site SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . BAP1 NM_004656 exon8 c.438-2A>T . CGGGCCTGGGGAA . 98.0 60.0 106.0 0.0 . 1032 BICD1 636 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 32260378 32260378 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . BICD1 NM_001714 exon1 c.G113A p.G38E AGTACGGGCTGGT . 125.0 11.0 139.0 0.0 . 153 BLID 414899 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 121986461 121986461 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_001001786 exon1 c.C170A p.P57H AACATAGGTTCTT . 183.0 29.0 162.0 0.0 . . BMPR1A 657 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 88649933 88649933 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . BMPR1A NM_004329 exon4 c.G182A p.C61Y TAAAGTGCTATTG . 275.0 34.0 243.0 0.0 . 1619 BMPR2 659 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 203332240 203332240 + Splice_Site SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . BMPR2 NM_001204 exon3 c.248-2A>G . ATTTATAGGATGT . 115.0 47.0 85.0 0.0 . 1003 BRPF1 7862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 9776289 9776289 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . BRPF1 NM_001003694 exon2 c.G465A p.E155E CAAGGAGAAGCGC . 215.0 37.0 245.0 0.0 . 92 C10orf137 26098 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 127434413 127434413 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . C10orf137 NM_001202438 exon19 c.A2728G p.M910V AGGCTCATGCGGA . 166.0 50.0 128.0 0.0 . 590 C1orf116 79098 hgsc.bcm.edu;broad.mit.edu 37 1 207198319 207198319 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . C1orf116 NM_023938 exon3 c.G196A p.D66N CGCTGTCAGCCTC . 177.0 8.0 87.0 0.0 . 93 C1orf228 339541 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 45163762 45163762 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_001145636 exon4 c.G303A p.E101E TCTTGAGGTTGGA . 99.0 18.0 138.0 0.0 . . C1orf63 57035 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 25570119 25570119 + Silent SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . C1orf63 NM_020317 exon4 c.G678T p.S226S CTTTTCCGACAGC . 108.0 5.0 175.0 0.0 . 91 C1orf65 164127 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 223567373 223567373 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . C1orf65 NM_152610 exon1 c.T556A p.S186T TCCCCTTCCTCAG . 475.0 50.0 244.0 0.0 . 91 C1orf94 84970 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 34667800 34667800 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . C1orf94 NM_001134734 exon4 c.C1386T p.L462L CTGGCTCAACCTG . 215.0 47.0 293.0 0.0 . 90 C1R 715 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 7242776 7242776 + Silent SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . . . . . CTTTCCCGGGGGG . 99.0 18.0 94.0 0.0 . . C20orf24 55969 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 20 35238002 35238002 + Splice_Site SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . C20orf24 NM_001199534 exon3 c.219-2A>T . TGCTCCAGATTCT . 229.0 26.0 180.0 0.0 . 90 C2 717 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 31911759 31911759 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . C2 NM_000063 exon14 c.G1799A p.C600Y GCACCTGTAGGGA . 135.0 19.0 110.0 0.0 . 92 C3orf30 152405 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 118867060 118867060 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . C3orf30 NM_152539 exon2 c.T1432C p.Y478H AAGGGTTATCATA . 134.0 18.0 98.0 0.0 . 92 C3orf55 152078 broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 157296101 157296101 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_001099777 exon5 c.C336T p.F112F TCATTTCTGCTGT . 241.0 77.0 269.0 2.0 . . C6orf118 168090 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 165715083 165715083 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . C6orf118 NM_144980 exon2 c.C728T p.A243V TGGCCCGCGGCCG . 122.0 14.0 109.0 0.0 . 90 C7orf60 154743 broad.mit.edu;mdanderson.org 37 7 112579749 112579749 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . C7orf60 NM_152556 exon1 c.G57A p.P19P AGTGTTCGGGGAC . 31.0 6.0 34.0 0.0 . 93 CACNA1B 774 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 9 140880973 140880973 + Frame_Shift_Del DEL G G - novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CACNA1B NM_001243812 exon14 c.1878delG p.L626fs CCTGCTGGGGATG . 186.0 62.0 166.0 0.0 . 138 CACNA1E 777 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 181706682 181706682 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CACNA1E NM_001205293 exon23 c.C3444T p.Y1148Y CCACTACATCGTG . 259.0 28.0 173.0 0.0 . 95 CASC5 57082 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 40920293 40920293 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CASC5 NM_170589 exon12 c.A5480G p.D1827G AAGAGGATATAGA . 89.0 17.0 113.0 0.0 . 660 CASP8AP2 9994 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 90581017 90581017 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CASP8AP2 NM_001137667 exon9 c.C5802T p.D1934D TGATGACCGGGAA . 121.0 23.0 161.0 0.0 . 24 CATSPERD 257062 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 5766134 5766134 + Silent SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_152784 exon17 c.C1527G p.G509G AGTTGGCTGCGAC . 157.0 22.0 124.0 0.0 . . CCDC110 256309 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 186366663 186366663 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CCDC110 NM_152775 exon7 c.A2495T p.H832L TAATGATGCTTGA . 31.0 7.0 33.0 0.0 . 90 CCDC132 55610 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 92905597 92905597 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CCDC132 NM_024553 exon12 c.C922A p.Q308K AAGCTGCAATATA . 122.0 27.0 113.0 0.0 . 90 CCDC136 64753 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 128445575 128445575 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CCDC136 NM_001201372 exon7 c.C1059A p.N353K GAAGAACAAGGTA . 77.0 20.0 84.0 1.0 . 24 CCDC142 84865 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 74707914 74707914 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CCDC142 NM_032779 exon5 c.G1464A p.K488K AGTCAGCTTCTGG . 251.0 24.0 205.0 0.0 . 68 CCDC150 284992 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 197521532 197521532 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_001080539 exon3 c.A352T p.I118F ATGAACATCTTTC . 98.0 26.0 62.0 0.0 . . CCDC22 28952 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 X 49103272 49103272 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CCDC22 NM_014008 exon7 c.C795T p.A265A TGGGGCCCCCATA . 33.0 8.0 45.0 0.0 . 130 CCDC34 91057 broad.mit.edu;mdanderson.org 37 11 27384586 27384586 + Silent SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CCDC34 NM_030771 exon1 c.G156T p.S52S CGGCGGCGACGGC . 55.0 8.0 54.0 0.0 . 90 CCNB3 85417 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 50037910 50037910 + Missense_Mutation SNP G G C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CCNB3 NM_033031 exon4 c.G252C p.E84D TAAAGAGTTTGTA . 191.0 38.0 213.0 0.0 . 482 CCR7 1236 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 38711491 38711491 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CCR7 NM_001838 exon3 c.A640G p.T214A GCTCTGTGATGAG . 205.0 28.0 135.0 0.0 . 659 CCSER2 54462 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 86131874 86131874 + Missense_Mutation SNP G G C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_018999 exon2 c.G1066C p.A356P GTTTTGGCTAAGG . 142.0 23.0 104.0 0.0 . . CDA 978 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 20940334 20940334 + Splice_Site SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CDA NM_001785 exon3 c.267-1G>A . TCCCCAGTGACAT . 104.0 20.0 137.0 0.0 . 91 CDHR1 92211 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 10 85972935 85972935 + Frame_Shift_Del DEL C C - novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CDHR1 NM_001171971 exon16 c.1871delC p.S624fs TCAATTCCCACAC . 164.0 54.0 155.0 0.0 . 91 CELSR3 1951 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 48697053 48697053 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CELSR3 NM_001407 exon1 c.T3015A p.D1005E ATCCCCATCTTCA . 113.0 20.0 142.0 1.0 . 523 CEP250 11190 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 34090341 34090341 + Silent SNP A A C rs151254784 byfrequency TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CEP250 NM_007186 exon30 c.A4144C p.R1382R GACCTGAGAACGG . 168.0 26.0 137.0 1.0 A|1.000;C|0.000 27 CEP70 80321 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 3 138256157 138256157 + Silent SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CEP70 NM_024491 exon7 c.G498T p.T166T TTGCTCCGTTCGT . 92.0 8.0 97.0 0.0 . 69 CEP89 84902 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 33439208 33439208 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CEP89 NM_032816 exon5 c.G559A p.G187S GGGAGCCTGGAAA . 59.0 9.0 38.0 0.0 . 94 CHD1 1105 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 98212136 98212136 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CHD1 NM_001270 exon23 c.A3364G p.N1122D TAATATTCTCCCG . 107.0 28.0 96.0 0.0 . 274 CHRM5 1133 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 15 34356472 34356472 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CHRM5 NM_012125 exon3 c.A1554G p.K518K GAAAAAAGTGGAA . 103.0 11.0 99.0 0.0 . 91 CHRNB2 1141 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 154543704 154543704 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CHRNB2 NM_000748 exon5 c.C405T p.A135A CAATGCCGTGGTC . 240.0 26.0 152.0 0.0 . 90 CLASRP 11129 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 45543521 45543521 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CLASRP NM_007056 exon2 c.C51T p.V17V GATGGTCGACTAC . 243.0 24.0 183.0 0.0 . 154 CLDN12 9069 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 90042146 90042146 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CLDN12 NM_012129 exon3 c.A156G p.T52T TTACACAGGCCTG . 252.0 32.0 230.0 1.0 . 90 CMKLR1 1240 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 12 108686719 108686719 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CMKLR1 NM_001142344 exon3 c.T21A p.D7E GTTGTAATCTTCA . 119.0 6.0 136.0 0.0 . 523 CNTNAP4 85445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 76513378 76513378 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CNTNAP4 NM_138994 exon11 c.A1606G p.I536V TACTATATAGATT . 171.0 26.0 195.0 0.0 . 70 COBLL1 22837 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 165548775 165548775 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . COBLL1 NM_014900 exon13 c.C3370T p.L1124L CAGTCAGCAAACT . 169.0 56.0 150.0 0.0 . 93 COL12A1 1303 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 75884975 75884975 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . COL12A1 NM_004370 exon13 c.T2489C p.M830T AATTTCATAGTAG . 172.0 31.0 166.0 0.0 . 142 COL27A1 85301 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 116973290 116973290 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . COL27A1 NM_032888 exon12 c.G2351A p.G784D AGAGGGGCAAGAT . 96.0 14.0 141.0 0.0 . 94 COL5A2 1290 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 189901361 189901361 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . COL5A2 NM_000393 exon52 c.A4094T p.D1365V TTCATATCAAGAC . 100.0 20.0 73.0 0.0 . 92 COL6A3 1293 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 238274558 238274558 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . COL6A3 NM_004369 exon12 c.G5621C p.R1874T CTGACCCTGTGCA . 61.0 17.0 46.0 0.0 . 526 COMMD9 29099 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 36296268 36296268 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . COMMD9 NM_014186 exon6 c.G511A p.V171M GCTCCACGGTGAC . 345.0 173.0 248.0 0.0 . 91 CPNE5 57699 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 36730726 36730726 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CPNE5 NM_020939 exon12 c.G823A p.A275T CACGGGCCAGCTC . 166.0 46.0 123.0 0.0 . 91 CRB1 23418 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 197403858 197403858 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CRB1 NM_201253 exon9 c.T2865A p.N955K TTTTAATGGACAA . 181.0 15.0 122.0 0.0 . 161 CTNNA1 1495 broad.mit.edu;ucsc.edu;mdanderson.org 37 5 138266252 138266252 + Nonsense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CTNNA1 NM_001903 exon15 c.G2101T p.E701X GATGCTGAAGTGT . 304.0 40.0 310.0 1.0 . 671 CUBN 8029 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 16967302 16967302 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CUBN NM_001081 exon43 c.T6584A p.F2195Y GAAATAAACTGAA . 298.0 48.0 260.0 0.0 . 166 CYLC1 1538 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 83129239 83129239 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CYLC1 NM_021118 exon4 c.A1523G p.D508G AGAAAGATATCAA . 92.0 27.0 142.0 0.0 . 112 CYP11B2 1585 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 143994784 143994784 + Silent SNP G G A rs200388238 TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CYP11B2 NM_000498 exon6 c.C1038T p.A346A TGCGGCGGCCAGG . 92.0 15.0 147.0 0.0 G|0.999;A|0.001 90 CYSLTR1 10800 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 77528233 77528233 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . CYSLTR1 NM_006639 exon3 c.A1011G p.V337V AAACTATACTTTA . 122.0 22.0 166.0 0.0 . 131 DDX46 9879 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 134121190 134121190 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DDX46 NM_014829 exon11 c.C1378G p.Q460E GCTTTACAGATTA . 134.0 11.0 88.0 0.0 . 227 DENND4A 10260 broad.mit.edu;mdanderson.org 37 15 65959791 65959791 + Nonsense_Mutation SNP G G C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DENND4A NM_001144823 exon29 c.C5234G p.S1745X ACCTTTGAATACT . 68.0 9.0 79.0 0.0 . 229 DGKK 139189 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 50147103 50147103 + RNA SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DGKK . . . . ACATTGCAGTGCT . 108.0 18.0 116.0 0.0 . 227 DIP2A 23181 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 47931358 47931358 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DIP2A NM_206891 exon8 c.G933A p.K311K GCCAAAGCCTGAG . 98.0 22.0 96.0 1.0 . 24 DLG2 1740 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 84634119 84634119 + Splice_Site SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DLG2 NM_001364 exon2 c.42+2T>A . CCTCTTACCTTCA . 144.0 19.0 135.0 2.0 . 96 DMRT3 58524 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 9 990928 990928 + Nonsense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DMRT3 NM_021240 exon2 c.C1342T p.Q448X TCAAAGCAGTCCA . 139.0 19.0 165.0 0.0 . 516 DNAH2 146754 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 7720031 7720031 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DNAH2 NM_020877 exon63 c.C9872T p.A3291V AGAAGGCCAGATG . 88.0 27.0 134.0 1.0 . 102 DNAH5 1767 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 13692155 13692155 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DNAH5 NM_001369 exon79 c.A13813G p.T4605A GGGCTGTCCTGAG . 169.0 20.0 148.0 1.0 . 182 DNAI2 64446 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 72285791 72285791 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DNAI2 NM_001172810 exon5 c.A526G p.R176G GGCAACAGGAAGT . 125.0 82.0 98.0 0.0 . 92 DNAJB8 165721 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 128181553 128181553 + Missense_Mutation SNP A A C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DNAJB8 NM_153330 exon3 c.T536G p.F179C GACTTGAACCCCG . 171.0 22.0 136.0 0.0 . 226 DNHD1 144132 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 6579426 6579426 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DNHD1 NM_144666 exon25 c.T8901C p.P2967P TTTCCCTGGCCAG . 137.0 69.0 147.0 0.0 . 24 DNM3 26052 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 172357765 172357765 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DNM3 NM_015569 exon20 c.C2338G p.L780V GCTCCCCTCGCAA . 126.0 11.0 67.0 0.0 . 90 DOCK11 139818 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 117752606 117752606 + Missense_Mutation SNP A A G rs112023398 TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DOCK11 NM_144658 exon31 c.A3386G p.D1129G TTCAGGACAATTA . 256.0 57.0 325.0 0.0 A|0.500;G|0.500 93 DOCK2 1794 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 169504811 169504811 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DOCK2 NM_004946 exon48 c.G4964A p.C1655Y CTGACTGCAGCAC . 55.0 10.0 62.0 1.0 . 97 DPCR1 135656 broad.mit.edu;ucsc.edu 37 6 30918300 30918300 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DPCR1 NM_080870 exon2 c.C2059A p.P687T AGGACCCCATTTG . 209.0 33.0 136.0 2.0 . 90 DUSP7 1849 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 52084943 52084943 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DUSP7 NM_001947 exon3 c.G1148A p.R383Q AGCGTCCGCTCAA . 234.0 47.0 304.0 0.0 . 659 DYNC1I1 1780 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 95614244 95614244 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DYNC1I1 NM_004411 exon8 c.A749G p.D250G ATTCCGACATCTT . 70.0 12.0 73.0 0.0 . 94 DYX1C1 161582 broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 55783381 55783381 + Silent SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . DYX1C1 NM_001033560 exon4 c.A345T p.T115T TGCTTCTGTAGCT . 236.0 39.0 201.0 1.0 . 91 EBF1 1879 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 158250310 158250310 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . EBF1 NM_024007 exon8 c.A652G p.T218A TGACTGTCGTAGA . 135.0 20.0 93.0 0.0 . 92 ECHS1 1892 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 135179489 135179489 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ECHS1 NM_004092 exon6 c.G730C p.V244L CATTCACTGATTC . 100.0 18.0 101.0 0.0 . 90 EFEMP1 2202 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 56108782 56108782 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . EFEMP1 NM_001039349 exon5 c.C605T p.P202L CCAGGAGGGCACT . 220.0 47.0 181.0 0.0 . 520 EIF3D 8664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 36920731 36920731 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . EIF3D NM_003753 exon4 c.A218G p.H73R TCCTCATGGAAAT . 210.0 42.0 147.0 0.0 . 69 EIF4E1B 253314 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 176072878 176072878 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_001099408 exon9 c.A626G p.K209R TATACAAAGAGCG . 261.0 49.0 229.0 1.0 . . ELL 8178 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 18576653 18576653 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ELL NM_006532 exon3 c.G259A p.D87N GGTTGTCGCGGCC . 57.0 7.0 75.0 0.0 . 1082 EML5 161436 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 89202777 89202777 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . EML5 NM_183387 exon7 c.A980T p.E327V CAAAGTTCACCTT . 185.0 38.0 185.0 0.0 . 93 ENTPD1 953 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 97626020 97626020 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ENTPD1 NM_001164178 exon10 c.T1449C p.P483P CACACCTCTCTCC . 672.0 87.0 536.0 2.0 . 93 ESRRG 2104 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 216850694 216850694 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ESRRG NM_001243518 exon3 c.G211A p.G71R AGCTCCCACTGGC . 658.0 57.0 387.0 0.0 . 187 FAM114A1 92689 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 38910313 38910313 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FAM114A1 NM_138389 exon7 c.A758G p.K253R GGACCAAGACGCT . 147.0 22.0 141.0 0.0 . 69 FAM133A 286499 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 92964819 92964819 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FAM133A NM_173698 exon4 c.A401G p.K134R AGAAAAAGAAGAA . 40.0 12.0 45.0 1.0 . 130 FAM22F 54754 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 97082514 97082514 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FAM22F NM_017561 exon5 c.T1344C p.C448C CTGGGAACACAGC . 118.0 24.0 150.0 0.0 . 68 FAM47A 158724 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 34150303 34150303 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FAM47A NM_203408 exon1 c.G93A p.A31A GCACTTCGCGAAG . 270.0 39.0 284.0 1.0 . 134 FAM65C 140876 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 49212742 49212742 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FAM65C NM_080829 exon15 c.G1837A p.A613T CACCGGCTGTGAG . 147.0 19.0 115.0 0.0 . 92 FAM71E2 284418 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 55871144 55871144 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_001145402 exon9 c.C1092T p.P364P GGGATAGGGAGCC . 159.0 16.0 141.0 0.0 . . FAM81B 153643 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 94749823 94749823 + Missense_Mutation SNP G G T rs202064996 alternate_allele TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FAM81B NM_152548 exon4 c.G466T p.A156S TCGCTCGCCAGGA . 189.0 36.0 158.0 0.0 G|0.999;A|0.000 92 FAT2 2196 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 150945319 150945319 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FAT2 NM_001447 exon1 c.C3174T p.D1058D GTCATCGTCCTGG . 136.0 20.0 155.0 0.0 . 96 FAXC 84553 broad.mit.edu;ucsc.edu 37 6 99790885 99790885 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_032511 exon2 c.A291G p.K97K AGCATCTTTAGAG . 134.0 18.0 94.0 2.0 . . FBN1 2200 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 15 48719788 48719788 + Nonsense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FBN1 NM_000138 exon58 c.C7180T p.R2394X ATCCTCGGCCATG . 137.0 12.0 124.0 0.0 . 92 FBXW2 26190 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 123526906 123526906 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FBXW2 NM_012164 exon8 c.G1296A p.T432T CAAGCCCGTGTCA . 201.0 39.0 202.0 0.0 . 227 FCRL5 83416 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 157494214 157494214 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FCRL5 NM_031281 exon10 c.C2094T p.V698V CAGGGTGACATCT . 393.0 38.0 225.0 1.0 . 156 FEM1A 55527 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 4793795 4793795 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FEM1A NM_018708 exon1 c.G1929A p.A643A CCTTGCGGCCCGG . 67.0 11.0 42.0 0.0 . 90 FHAD1 114827 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 15684641 15684641 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FHAD1 NM_052929 exon20 c.A2532T p.L844F CGTTTTAAATAAT . 64.0 12.0 134.0 0.0 . 69 FLG 2312 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 152286777 152286777 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FLG NM_002016 exon3 c.C585T p.D195D CCTATTGTCTCCT . 282.0 31.0 143.0 0.0 . 106 FLG2 388698 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 152327323 152327323 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FLG2 NM_001014342 exon3 c.G2939C p.G980A CCTGAGCCTGACT . 520.0 40.0 300.0 0.0 . 151 FLNA 2316 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 153580981 153580981 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FLNA NM_001110556 exon40 c.C6442A p.R2148S CCCGACGCCTGCG . 162.0 28.0 228.0 0.0 . 599 FNDC3B 64778 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 172048416 172048416 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FNDC3B NM_001135095 exon13 c.A1465T p.T489S GGCATCACATGGG . 218.0 38.0 197.0 0.0 . 155 FOLR1 2348 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 71903312 71903312 + Missense_Mutation SNP A A C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FOLR1 NM_016729 exon1 c.A95C p.E32A GGACTGAGCTTCT . 224.0 29.0 217.0 1.0 . 91 FOXC1 2296 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 1612242 1612242 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FOXC1 NM_001453 exon1 c.C1562T p.S521F ACAACTCTCCAGT . 238.0 21.0 137.0 0.0 . 227 FOXO4 4303 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 70320820 70320820 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FOXO4 NM_005938 exon2 c.G740A p.R247H GAAACCGTGAAGA . 116.0 30.0 140.0 0.0 . 986 FREM1 158326 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 14824891 14824891 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FREM1 NM_144966 exon12 c.A1981T p.I661L TAGTTATATAGGC . 81.0 21.0 111.0 0.0 . 138 FRMD7 90167 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 131212020 131212020 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FRMD7 NM_194277 exon12 c.C2025T p.A675A GATTCTGGCCATG . 346.0 49.0 433.0 0.0 . 228 FRYL 285527 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 48607809 48607809 + Silent SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FRYL NM_015030 exon11 c.A783T p.I261I ATGTTTTATATCT . 142.0 32.0 149.0 0.0 . 69 FXN 2395 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 71668103 71668103 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . FXN NM_000144 exon3 c.A311G p.D104G CGCTGGACTCTTT . 69.0 11.0 87.0 1.0 . 251 GABRA4 2557 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 46967002 46967002 + Silent SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GABRA4 NM_000809 exon8 c.T1119A p.P373P GGCTTCAGGATGC . 115.0 12.0 128.0 0.0 . 156 GABRA6 2559 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 161116665 161116665 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GABRA6 NM_000811 exon6 c.A553G p.I185V GAAATCATATATA . 78.0 12.0 72.0 0.0 . 163 GABRB3 2562 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 26793135 26793135 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GABRB3 NM_021912 exon9 c.A1227G p.R409R CCCTTCTCGAGGC . 174.0 37.0 167.0 0.0 . 518 GABRR3 200959 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 97753825 97753825 + RNA SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GABRR3 . . . . AAGCCAGGACCAT . 98.0 15.0 81.0 0.0 . 68 GALNT14 79623 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 31178813 31178813 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GALNT14 NM_001253826 exon6 c.C512T p.P171L ACCTTGGGCAACT . 215.0 59.0 160.0 0.0 . 93 GATAD2B 57459 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 153785891 153785891 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GATAD2B NM_020699 exon8 c.T1254C p.F418F ACATACAAAGGGT . 284.0 19.0 181.0 1.0 . 90 GIGYF2 26058 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 233710580 233710580 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GIGYF2 NM_001103147 exon28 c.G3507A p.T1169T TAATACGGCAAAT . 171.0 26.0 94.0 0.0 . 28 GLP2R 9340 broad.mit.edu;mdanderson.org 37 17 9729529 9729529 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GLP2R NM_004246 exon1 c.G149A p.R50K CTGGGAGGCCCTT . 10.0 3.0 18.0 0.0 . 524 GNB4 59345 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 179119095 179119095 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GNB4 NM_021629 exon10 c.G929C p.G310A TCATGACCAGCAA . 228.0 31.0 241.0 0.0 . 228 GNL2 29889 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 38033329 38033329 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GNL2 NM_013285 exon15 c.G1988A p.R663K TCTTCCCTTTGTG . 115.0 24.0 142.0 0.0 . 91 GNPAT 8443 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 231411879 231411879 + Splice_Site SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GNPAT NM_014236 exon15 c.1938-2A>G . TCTCCTAGAAATA . 345.0 33.0 201.0 0.0 . 156 GP1BA 2811 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 4837033 4837033 + Silent SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_000173 exon2 c.C1134A p.S378S AAAATCCACTACT . 130.0 59.0 105.0 0.0 . . GPA33 10223 broad.mit.edu;bcgsc.ca 37 1 167038166 167038166 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GPA33 NM_005814 exon3 c.G408T p.L136F GAGGACCAACAGG . 343.0 30.0 175.0 1.0 . 90 GPM6B 2824 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 13801604 13801604 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GPM6B NM_001001995 exon4 c.G405A p.A135A AAAGGACGCAATT . 210.0 29.0 209.0 0.0 . 130 GPR116 221395 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 46823751 46823751 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GPR116 NM_015234 exon20 c.T3921C p.S1307S TATTGGAGAACTC . 547.0 75.0 380.0 0.0 . 91 GPR158 57512 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 25887663 25887663 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GPR158 NM_020752 exon11 c.G3108T p.M1036I TGAAATGGAGAAA . 110.0 31.0 88.0 0.0 . 141 GPR31 2853 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 6 167570796 167570796 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GPR31 NM_005299 exon1 c.T524A p.I175N CAGATGATGCTGA . 95.0 6.0 80.0 0.0 . 90 GPX6 257202 broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 28473513 28473513 + Silent SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GPX6 . . . . TTTTTCTCCATTC . 158.0 10.0 117.0 0.0 . 95 GRAMD4 23151 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 47059981 47059981 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GRAMD4 NM_015124 exon7 c.G684T p.W228C CGACTGGTACTCC . 228.0 63.0 202.0 1.0 . 23 GRIA2 2891 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 158257592 158257592 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GRIA2 NM_000826 exon11 c.T1537A p.S513T GACTTCTCAAAGC . 144.0 45.0 164.0 0.0 . 515 GRIN2A 2903 ucsc.edu;bcgsc.ca 37 16 9862846 9862846 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GRIN2A NM_000833 exon13 c.C2457T p.G819G GAATACGCCCGCC . 114.0 12.0 133.0 1.0 . 349 GRK7 131890 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 141497352 141497352 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GRK7 NM_139209 exon1 c.A226T p.T76S CTAGCCACAGTGC . 82.0 11.0 97.0 0.0 . 522 GRM1 2911 hgsc.bcm.edu;broad.mit.edu 37 6 146755591 146755591 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GRM1 NM_000838 exon9 c.C3244T p.L1082L CTGCAGCTGAGCA . 44.0 5.0 41.0 0.0 . 1080 GRM7 2917 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 7620822 7620822 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GRM7 NM_000844 exon8 c.C2229T p.A743A GCAAGCCAGAGGG . 192.0 44.0 225.0 0.0 . 526 GTF3C1 2975 broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 27506737 27506737 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GTF3C1 NM_001520 exon15 c.C2427T p.Y809Y GATGAGGTACCAC . 132.0 28.0 149.0 2.0 . 94 GZMK 3003 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 54320546 54320546 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . GZMK NM_002104 exon2 c.G123A p.M41I ATTTATGGCCTCC . 156.0 25.0 143.0 1.0 . 90 HELB 92797 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 12 66704296 66704296 + Nonsense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HELB NM_033647 exon4 c.A1588T p.K530X GCGGACAAGGCTA . 144.0 18.0 101.0 0.0 . 515 HERC2P3 283755 broad.mit.edu;mdanderson.org 37 15 20657690 20657690 + RNA SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HERC2P3 . . . . TGTTTGCGCTGTG . 59.0 7.0 64.0 0.0 . 92 HEXA 3073 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 15 72643535 72643535 + Missense_Mutation SNP T T A rs121907976 alternate_allele TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HEXA NM_000520 exon6 c.A611T p.H204L ACCAGATGCCAGT . 174.0 24.0 116.0 0.0 . 94 HIP1R 9026 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 12 123338690 123338690 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HIP1R NM_003959 exon8 c.C678T p.L226L CCACCTCTACCAC . 61.0 5.0 88.0 0.0 . 91 HLA-E 3133 broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 30457636 30457636 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HLA-E NM_005516 exon2 c.G198T p.M66I GAGGATGGTGCCG . 86.0 29.0 78.0 1.0 . 516 HMCN1 83872 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 186077693 186077693 + Silent SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HMCN1 NM_031935 exon71 c.T10953A p.P3651P CCCACCTGTAATT . 118.0 12.0 75.0 1.0 . 113 HMCN1 83872 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 186099815 186099815 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HMCN1 NM_031935 exon85 c.A13216T p.I4406F CTGGCCATCTATG . 93.0 11.0 51.0 0.0 . 113 HMGB4 127540 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 34330001 34330001 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HMGB4 NM_145205 exon2 c.G209A p.R70Q AAGCCCGATACCA . 89.0 18.0 119.0 0.0 . 90 HTR1D 3352 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 23519871 23519871 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HTR1D NM_000864 exon1 c.T842A p.L281H TCAGCAAGCTTGA . 61.0 14.0 96.0 0.0 . 90 HTR1F 3355 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 88040703 88040703 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HTR1F NM_000866 exon2 c.C804T p.L268L AAGTCTCAGGTCT . 50.0 8.0 59.0 0.0 . 93 HUWE1 10075 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 53563161 53563161 + Missense_Mutation SNP G G C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . HUWE1 NM_031407 exon80 c.C12478G p.L4160V CCAGCAGATAAAC . 253.0 56.0 294.0 0.0 . 280 IFIT2 3433 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 10 91066441 91066441 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IFIT2 NM_001547 exon2 c.C728T p.A243V AGAAAGCCCCAGG . 137.0 12.0 129.0 0.0 . 92 IFRD1 3475 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 112102235 112102235 + Splice_Site SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IFRD1 NM_001197080 exon7 c.647+1G>A . TGAGATGTATGTA . 71.0 8.0 67.0 0.0 . 91 IGF1R 3480 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 15 99451929 99451929 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IGF1R NM_000875 exon6 c.C1263T p.Y421Y CTTCTACGTCCTC . 190.0 15.0 195.0 0.0 . 1490 IGFN1 91156 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 201186436 201186436 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IGFN1 NM_001164586 exon17 c.C9617T p.A3206V CTTCCGCGCCAGC . 97.0 12.0 88.0 0.0 . 71 IGSF10 285313 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 151161336 151161336 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IGSF10 NM_178822 exon5 c.C5399A p.T1800K TCAACCGTCACCA . 348.0 58.0 357.0 0.0 . 102 IGSF9 57549 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 159901621 159901621 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IGSF9 NM_001135050 exon11 c.C1343T p.P448L ACAACAGGAGGAG . 113.0 9.0 50.0 0.0 . 156 IKZF2 22807 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 213872617 213872617 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IKZF2 NM_016260 exon8 c.G1048C p.V350L TTATAACTGGGGC . 193.0 41.0 155.0 0.0 . 226 IL12RB1 3594 broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 18183075 18183075 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IL12RB1 NM_153701 exon9 c.T868C p.S290P GGCAGGACAGCAT . 181.0 18.0 200.0 1.0 . 91 IL1RL1 9173 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 102968228 102968228 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IL1RL1 NM_016232 exon11 c.A1518G p.V506V GAAAGTACAGGGG . 213.0 37.0 177.0 0.0 . 517 INO80 54617 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 41337196 41337196 + Missense_Mutation SNP T T A rs115089447 byfrequency;alternate_allele TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . INO80 NM_017553 exon24 c.A2813T p.E938V TGGCTCTCCCCTT . 66.0 14.0 63.0 0.0 T|0.989;C|0.011 72 INS-IGF2 723961 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 2170519 2170519 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . INS-IGF2 NM_001042376 exon3 c.A244T p.T82S TGGCTGTGGCGTC . 62.0 11.0 60.0 0.0 . 22 IQGAP1 8826 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 15 91043276 91043276 + Missense_Mutation SNP A A C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IQGAP1 NM_003870 exon38 c.A4910C p.D1637A TATTTGATAGAGC . 69.0 5.0 76.0 0.0 . 950 IQSEC3 440073 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 266236 266236 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IQSEC3 NM_001170738 exon6 c.G2199A p.E733E GGACGAGGCCCTG . 215.0 60.0 193.0 1.0 . 560 IRAK1 3654 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 153284220 153284220 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . IRAK1 NM_001569 exon5 c.G559A p.V187M GGGACACTGAGCT . 192.0 28.0 190.0 0.0 . 1074 ISM2 145501 broad.mit.edu;mdanderson.org 37 14 77948666 77948666 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ISM2 NM_199296 exon4 c.C972T p.Y324Y CTCACCGTAGCTG . 76.0 8.0 90.0 0.0 . 91 ITGAX 3687 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 31390892 31390892 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ITGAX NM_000887 exon24 c.C2793T p.H931H CAGCCACGAACAA . 118.0 26.0 151.0 1.0 . 229 ITIH5 80760 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 7684011 7684011 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ITIH5 NM_001001851 exon3 c.A178T p.I60F AAATGATGGTAGA . 282.0 45.0 207.0 1.0 . 92 ITIH6 347365 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 X 54823434 54823434 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_198510 exon2 c.C198T p.A66A TTCATGGGCTTCA . 342.0 14.0 333.0 0.0 . . KCNH1 3756 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 211093070 211093070 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KCNH1 NM_172362 exon7 c.G1374T p.M458I GCTGGTCATTGTG . 460.0 23.0 247.0 0.0 . 94 KCNH7 90134 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 163361023 163361023 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KCNH7 NM_033272 exon6 c.C1058A p.S353Y TCTGAAGAAGGAG . 228.0 47.0 178.0 0.0 . 95 KCNJ2 3759 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 68171825 68171825 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KCNJ2 NM_000891 exon2 c.C645T p.G215G AGTGGGCAATCTT . 144.0 22.0 102.0 0.0 . 90 KCNK13 56659 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 90651207 90651207 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KCNK13 NM_022054 exon2 c.C1087T p.L363L GCCATCCTGCAGA . 163.0 26.0 169.0 0.0 . 91 KCNS3 3790 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 18112349 18112349 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KCNS3 NM_002252 exon3 c.A74G p.K25R GCTTTAAGCAGTC . 365.0 128.0 273.0 0.0 . 94 KCTD16 57528 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 143853260 143853260 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KCTD16 NM_020768 exon4 c.C870G p.C290W CGATTGCTGCTGC . 356.0 54.0 323.0 0.0 . 137 KCTD20 222658 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 36449534 36449534 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KCTD20 NM_173562 exon6 c.A854G p.Q285R ATTCCCAAAGTAG . 170.0 23.0 101.0 0.0 . 92 KIAA1244 57221 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 138531046 138531046 + Splice_Site SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KIAA1244 NM_020340 exon4 c.220-1G>A . TTTACAGAAGCTT . 366.0 41.0 250.0 1.0 . 228 KIAA1244 57221 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 138655566 138655566 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KIAA1244 NM_020340 exon33 c.C5583T p.D1861D TGAAGACATCTTT . 106.0 11.0 79.0 0.0 . 228 KIAA1407 57577 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 113720448 113720448 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KIAA1407 NM_020817 exon13 c.G2157T p.K719N CATTTTCTTCAGT . 330.0 45.0 323.0 0.0 . 92 KIF7 374654 broad.mit.edu;mdanderson.org 37 15 90193163 90193163 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KIF7 NM_198525 exon3 c.T338C p.L113P TCCTCAAGGAGGG . 38.0 7.0 51.0 1.0 . 523 KLF12 11278 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 74387348 74387348 + Silent SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KLF12 NM_007249 exon5 c.C747A p.T249T ATCTAAGGTCACA . 170.0 38.0 222.0 0.0 . 91 KLHL29 114818 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 23918908 23918908 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KLHL29 NM_052920 exon10 c.C1829T p.P610L GGAACCCGCAGAA . 118.0 34.0 135.0 0.0 . 70 KLK9 284366 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 51506441 51506441 + Silent SNP T T G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KLK9 NM_012315 exon5 c.A679C p.R227R GGGGTCTGGAGCA . 79.0 9.0 65.0 0.0 . 226 KNDC1 85442 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 135038187 135038187 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KNDC1 NM_152643 exon30 c.G5043A p.Q1681Q GAGCCAGGTGCAC . 307.0 37.0 207.0 0.0 . 229 KPNA2 3838 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 66040550 66040550 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KPNA2 NM_002266 exon9 c.G1278T p.M426I GTTGATGAACCTC . 247.0 30.0 188.0 1.0 . 560 KRT27 342574 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 38938637 38938637 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KRT27 NM_181537 exon1 c.G109A p.G37S GCACACCGCATGT . 145.0 13.0 117.0 0.0 . 90 KRTAP5-3 387266 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 1629511 1629511 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KRTAP5-3 NM_001012708 exon1 c.C105T p.C35C TACACAGCAGCCG . 42.0 10.0 49.0 0.0 . 92 KRTCAP2 200185 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 155145067 155145067 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . KRTCAP2 NM_173852 exon3 c.G275T p.G92V TGGAATCCTTTGC . 282.0 16.0 157.0 0.0 . 90 LCE1B 353132 hgsc.bcm.edu;broad.mit.edu 37 1 152785131 152785131 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . LCE1B NM_178349 exon1 c.C209T p.S70F GCAGTTCTGGGGG . 98.0 4.0 72.0 0.0 . 68 LEPR 3953 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 66102182 66102182 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . LEPR NM_002303 exon20 c.A2982G p.K994K CTCTAAACCAAGT . 36.0 7.0 56.0 0.0 . 91 LGSN 51557 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 63990576 63990576 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . LGSN NM_016571 exon4 c.A880T p.R294W ATTTCCTTGCCAC . 145.0 17.0 104.0 0.0 . 227 LHCGR 3973 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 48915238 48915238 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . LHCGR NM_000233 exon11 c.G1698A p.K566K AGCAATCTTTGTA . 169.0 19.0 151.0 0.0 . 589 LIPI 149998 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 15579225 15579225 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . LIPI NM_198996 exon1 c.A20G p.H7R TTATTATGTAAAC . 58.0 14.0 48.0 0.0 . 70 LPHN3 23284 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 62800605 62800605 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . LPHN3 NM_015236 exon11 c.T1956A p.N652K TTTGAATGCATGG . 238.0 65.0 210.0 0.0 . 508 LRRC1 55227 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 53764548 53764548 + Missense_Mutation SNP A A G rs200563845 TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . LRRC1 NM_018214 exon8 c.A646G p.I216V TAGGAAATAGGAA . 122.0 17.0 95.0 0.0 A|0.999;G|0.000 91 LRRC3B 116135 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 26751290 26751290 + Missense_Mutation SNP T T G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . LRRC3B NM_052953 exon2 c.T127G p.S43A TCTTCCTCTGGGG . 150.0 36.0 177.0 0.0 . 94 LRRK1 79705 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 15 101592136 101592136 + Silent SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . LRRK1 NM_024652 exon24 c.T3660A p.P1220P GGTCCCTGAACTG . 108.0 10.0 134.0 0.0 . 602 LTBP4 8425 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 41131776 41131776 + Missense_Mutation SNP G G C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . LTBP4 . . . . CTGGGAGTGTGCT . 79.0 14.0 36.0 0.0 . 93 MADD 8567 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 47315515 47315515 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MADD NM_130475 exon22 c.G3497A p.S1166N GTGTGAGCCTGAC . 132.0 32.0 128.0 0.0 . 682 MAGEB6 158809 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 26212302 26212302 + Silent SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MAGEB6 NM_173523 exon2 c.C339A p.G113G CACTGGCTCTCCT . 215.0 59.0 192.0 0.0 . 133 MAMLD1 10046 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 149638231 149638231 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MAMLD1 NM_005491 exon3 c.T386C p.L129S AGTCATTACTGCT . 141.0 19.0 130.0 0.0 . 130 MAP3K11 4296 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 11 65365896 65365896 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MAP3K11 NM_002419 exon10 c.A2410G p.T804A ACAAGGTCCAGGG . 42.0 5.0 36.0 0.0 . 980 MAP3K9 4293 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 71206814 71206814 + Missense_Mutation SNP G G C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MAP3K9 NM_033141 exon7 c.C1635G p.S545R GGAGCGGCTGTTG . 307.0 51.0 343.0 1.0 . 546 MCCC1 56922 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 3 182788806 182788806 + Nonsense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MCCC1 NM_020166 exon7 c.A742T p.K248X CAAACTTCTCGAT . 181.0 26.0 150.0 0.0 . 92 MCTP1 79772 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 94114816 94114816 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MCTP1 NM_024717 exon19 c.A2609T p.K870M ATTACCTTGTCAT . 234.0 36.0 186.0 0.0 . 92 MDGA1 266727 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 37611590 37611590 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MDGA1 NM_153487 exon14 c.A2531G p.H844R CCGATGTGTTTCC . 253.0 24.0 167.0 1.0 . 91 MDGA1 266727 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 37606362 37606362 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MDGA1 NM_153487 exon15 c.A2618G p.N873S CACACATTGCCCT . 109.0 9.0 73.0 0.0 . 91 MEGF8 1954 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 42859978 42859978 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MEGF8 NM_001271938 exon24 c.G4213A p.A1405T GGCTCTGCCCGCT . 57.0 9.0 76.0 0.0 . 23 MFSD11 79157 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 74774280 74774280 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MFSD11 NM_001242532 exon13 c.C1196A p.A399E TTTGCGCAGCCGT . 285.0 31.0 203.0 0.0 . 91 MIA3 375056 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 222822189 222822189 + Nonsense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MIA3 NM_198551 exon8 c.C3628T p.Q1210X GTATATCAAGGTA . 68.0 11.0 52.0 0.0 . 98 MICAL3 57553 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 18347690 18347690 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MICAL3 NM_001136004 exon23 c.G2952A p.V984V GCTGGCCACGGCG . 148.0 29.0 129.0 0.0 . 68 MIER1 57708 hgsc.bcm.edu;broad.mit.edu 37 1 67436586 67436586 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MIER1 NM_001077700 exon9 c.G868A p.D290N ACAGGTGATGAGA . 77.0 5.0 136.0 0.0 . 91 MIR206 406989 broad.mit.edu;ucsc.edu;mdanderson.org 37 6 52009213 52009213 + RNA SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . . . . . AAGGAAGTGTGTG . 223.0 22.0 153.0 0.0 . . MIR548B 693128 ucsc.edu;mdanderson.org 37 6 119390243 119390243 + RNA SNP T T G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . . . . . CTGAGGTTCTTGC . 339.0 40.0 213.0 0.0 . . MLKL 197259 broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 74729411 74729411 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MLKL NM_152649 exon2 c.G245A p.R82K TTGGATCTATTGC . 189.0 33.0 235.0 1.0 . 561 MLL 4297 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 118374789 118374789 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MLL NM_001197104 exon27 c.G8182A p.E2728K GGGACAGAGAGTG . 127.0 26.0 109.0 0.0 . 1255 MMP1 4312 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 102662135 102662135 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MMP1 NM_002421 exon8 c.G1125A p.K375K GATATGCTTCACA . 149.0 23.0 135.0 0.0 . 229 MORC1 27136 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 108833252 108833252 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MORC1 NM_014429 exon2 c.C98T p.A33V AATTCAGCCAGTG . 93.0 12.0 109.0 0.0 . 98 MORC4 79710 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 106185319 106185319 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MORC4 NM_001085354 exon16 c.G2509T p.A837S ATTCAGCTTGGCG . 119.0 26.0 181.0 0.0 . 131 MOSPD2 158747 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 14910893 14910893 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MOSPD2 NM_152581 exon3 c.A128G p.D43G AACAAGATGATAA . 177.0 25.0 179.0 0.0 . 130 MTNR1A 4543 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 187455096 187455096 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MTNR1A NM_005958 exon2 c.G800A p.S267N ACCATGCTGGCGG . 129.0 32.0 113.0 0.0 . 524 MUC16 94025 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9049896 9049896 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MUC16 NM_024690 exon5 c.A31735G p.R10579G GACTTCTCTCTGC . 299.0 54.0 213.0 1.0 . 566 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9056445 9056445 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MUC16 NM_024690 exon3 c.C31001T p.S10334F GTTGAAGAGGAGA . 262.0 31.0 200.0 0.0 . 566 MUC2 4583 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 1081136 1081136 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MUC2 NM_002457 exon11 c.G1432A p.V478M CCCCACGTGACCG . 143.0 27.0 96.0 0.0 . 90 MUC4 4585 broad.mit.edu;bcgsc.ca 37 3 195507288 195507288 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MUC4 NM_018406 exon2 c.A11163G p.V3721V TGTAGATACTGAG . 507.0 49.0 559.0 1.0 . 90 MUSK 4593 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 113509954 113509954 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MUSK NM_001166280 exon8 c.G817A p.D273N GTGAAAGACCGAG . 126.0 32.0 116.0 0.0 . 1379 MYH15 22989 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 108178291 108178291 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MYH15 NM_014981 exon19 c.C1998A p.N666K ATTCAGGTTTTCC . 72.0 6.0 61.0 0.0 . 73 MYO1B 4430 broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 192228452 192228452 + Splice_Site SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MYO1B NM_012223 exon10 c.766-2A>T . CTCCCCAGAATGC . 81.0 24.0 79.0 1.0 . 238 MYOCD 93649 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 12666558 12666558 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . MYOCD NM_001146312 exon14 c.A2558G p.E853G GTGATGAGCATCT . 194.0 124.0 155.0 0.0 . 93 NAALAD2 10003 broad.mit.edu;ucsc.edu 37 11 89896533 89896533 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NAALAD2 NM_005467 exon10 c.C1131G p.D377E TATTGACCCAACC . 74.0 10.0 67.0 1.0 . 92 NAF1 92345 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 164061471 164061471 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NAF1 NM_138386 exon5 c.A782G p.H261R TCAATGTGATCTG . 55.0 10.0 52.0 0.0 . 70 NAV1 89796 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 201757647 201757647 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NAV1 NM_020443 exon10 c.C3047T p.P1016L GCATCCCCACCCA . 250.0 14.0 146.0 0.0 . 228 NBAS 51594 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 15307372 15307372 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NBAS NM_015909 exon52 c.A6916T p.T2306S AGGGAGTGGAGAC . 213.0 23.0 180.0 0.0 . 94 NES 10763 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 156641300 156641300 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NES NM_006617 exon4 c.T2680A p.S894T CCAGAGATCTCAA . 204.0 17.0 129.0 0.0 . 520 NES 10763 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 156639411 156639411 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NES NM_006617 exon4 c.G4569A p.M1523I ATCCTCCATCCCA . 297.0 60.0 133.0 0.0 . 520 NEU1 4758 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 31827993 31827993 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NEU1 NM_000434 exon5 c.A847G p.N283D AGTTGTTCTGGTT . 312.0 39.0 219.0 0.0 . 91 NLRP4 147945 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 56369470 56369470 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NLRP4 NM_134444 exon3 c.G711T p.Q237H GCTGCAGGGCGGC . 189.0 33.0 127.0 0.0 . 216 NLRP7 199713 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 55453072 55453072 + Missense_Mutation SNP G G A rs142163492 TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NLRP7 NM_001127255 exon2 c.C8T p.S3L TGGGGCGATGTCA . 93.0 9.0 75.0 0.0 G|1.000;A|0.000 291 NMUR2 56923 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 151775082 151775082 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NMUR2 NM_020167 exon3 c.G875C p.S292T ACAAAGCTGAAGA . 322.0 57.0 296.0 0.0 . 526 NOS3 4846 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 150698351 150698351 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NOS3 NM_001160111 exon10 c.C1266T p.A422A CCACGCCGCCACG . 96.0 18.0 88.0 0.0 . 1011 NOTCH4 4855 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 32188291 32188291 + Silent SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NOTCH4 NM_004557 exon6 c.A1050T p.T350T ACAGCTTGTGCCG . 125.0 15.0 60.0 0.0 . 1321 NPAP1 23742 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 24921553 24921553 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_018958 exon1 c.T539C p.L180P CCCCCCTTAGCAG . 97.0 15.0 85.0 0.0 . . NPR1 4881 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 153653162 153653162 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NPR1 NM_000906 exon2 c.C907T p.R303C AGTGCCCGCCAGG . 91.0 19.0 44.0 0.0 . 393 NR2C1 7181 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 12 95422248 95422248 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NR2C1 NM_003297 exon12 c.A1446G p.L482L CTCCTGTAGTTTG . 64.0 6.0 63.0 0.0 . 187 NR6A1 2649 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 9 127284984 127284984 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NR6A1 NM_033334 exon10 c.A1443G p.X481W AACAGGTCATTCC . 33.0 4.0 42.0 0.0 . 189 NRG2 9542 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 139239488 139239488 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NRG2 NM_013982 exon6 c.G1199A p.G400E TCAAATCCAAGGT . 244.0 32.0 213.0 0.0 . 526 NRK 203447 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 105179196 105179196 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NRK NM_198465 exon21 c.A3534G p.S1178S GGAATCACCTAAG . 94.0 12.0 104.0 0.0 . 630 NRSN1 140767 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 24146149 24146149 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NRSN1 NM_080723 exon4 c.A563G p.N188S TTCAAAATGTCCA . 119.0 14.0 78.0 0.0 . 90 NUP214 8021 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 134038560 134038560 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NUP214 NM_005085 exon19 c.G2723A p.S908N TTCACAGGTGTGG . 95.0 17.0 103.0 0.0 . 1131 NUP93 9688 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 56872968 56872968 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . NUP93 NM_014669 exon19 c.A2123T p.D708V ATATTGATAGAGC . 223.0 54.0 201.0 0.0 . 205 ODF3 113746 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 198506 198506 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ODF3 NM_053280 exon5 c.C455A p.T152N CCAATACCGTCGG . 159.0 23.0 171.0 0.0 . 493 ONECUT3 390874 broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 1775332 1775332 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_001080488 exon2 c.T1373C p.V458A ACACCGTCAGCAA . 175.0 28.0 161.0 2.0 . . OPCML 4978 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 132306092 132306092 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OPCML NM_002545 exon6 c.A825G p.K275K GCGGCCTTTGTTT . 146.0 21.0 125.0 0.0 . 93 OPN4 94233 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 88419162 88419162 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OPN4 NM_001030015 exon6 c.T770C p.L257P TCTTCCTCCCTCT . 148.0 26.0 101.0 0.0 . 69 OR10A5 144124 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 6867579 6867579 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR10A5 NM_178168 exon1 c.T666C p.I222I TCGCATTGCTGCT . 452.0 54.0 445.0 0.0 . 71 OR10T2 128360 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 158368322 158368322 + Missense_Mutation SNP T T G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR10T2 NM_001004475 exon1 c.A935C p.K312T CTCATCTTGGTTG . 94.0 12.0 57.0 0.0 . 70 OR13C3 138803 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 107298487 107298487 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR13C3 NM_001001961 exon1 c.T608C p.I203T TTGATAATATTAT . 98.0 19.0 90.0 0.0 . 69 OR2G6 391211 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 248685435 248685435 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR2G6 NM_001013355 exon1 c.C488A p.T163N CCCTCACTGTGCA . 448.0 36.0 234.0 0.0 . 71 OR2L2 26246 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 248202311 248202311 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR2L2 NM_001004686 exon1 c.T742C p.S248P GTAGTGTCCTTCT . 471.0 44.0 230.0 0.0 . 70 OR2T10 127069 ucsc.edu;bcgsc.ca 37 1 248756804 248756804 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR2T10 NM_001004693 exon1 c.A266G p.D89G GTCTTGTCTTTGG . 289.0 30.0 148.0 2.0 . 69 OR2T1 26696 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 248569623 248569623 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR2T1 NM_030904 exon1 c.T328A p.Y110N CCCATGTACTTCC . 337.0 34.0 180.0 0.0 . 69 OR2T34 127068 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 1 248737675 248737675 + Nonsense_Mutation SNP A A C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR2T34 NM_001001821 exon1 c.T384G p.Y128X AGCAGCATATCGG . 1219.0 94.0 651.0 0.0 . 69 OR4A5 81318 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 51412084 51412084 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR4A5 NM_001005272 exon1 c.C312T p.F104F ACCAAAGAAATGG . 250.0 36.0 276.0 0.0 . 92 OR5D18 219438 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 55587463 55587463 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR5D18 NM_001001952 exon1 c.G358A p.A120T GTGATGGCCTATG . 338.0 70.0 288.0 1.0 . 71 OR7C2 26658 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 15052324 15052324 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OR7C2 NM_012377 exon1 c.A24T p.E8D AACAGAAGTTGGA . 131.0 14.0 89.0 0.0 . 71 OSTM1 28962 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 108372335 108372335 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . OSTM1 NM_014028 exon4 c.A683T p.Y228F GTTTTGTATGCTT . 228.0 31.0 172.0 0.0 . 68 PABPC1L 80336 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 43566743 43566743 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PABPC1L NM_001124756 exon13 c.C1687G p.L563V ACCCAGCTGGCTG . 195.0 38.0 140.0 0.0 . 47 PCDH11X 27328 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 91133861 91133861 + Missense_Mutation SNP G G C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PCDH11X NM_001168363 exon2 c.G2622C p.K874N GAAGAAGAAGCAT . 455.0 94.0 502.0 1.0 . 193 PCDH1 5097 hgsc.bcm.edu;bcgsc.ca 37 5 141248811 141248811 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PCDH1 NM_032420 exon2 c.A226T p.S76C CGAGGCTCCCAAT . 102.0 6.0 121.0 0.0 . 95 PCDH15 65217 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 55600110 55600110 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PCDH15 NM_001142763 exon30 c.A3968G p.N1323S GCTCTGTTGGTTT . 186.0 30.0 142.0 0.0 . 193 PCDHAC2 56134 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 140348722 140348722 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PCDHAC2 NM_031883 exon1 c.T2371A p.Y791N AAGACCTACTGCT . 165.0 31.0 148.0 1.0 . 26 PCDHB1 29930 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 140432602 140432602 + Missense_Mutation SNP C C A rs116101801 alternate_allele TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PCDHB1 NM_013340 exon1 c.C1547A p.A516E TCTACGCGCTGAG . 141.0 40.0 130.0 1.0 C|0.999;T|0.001 90 PCDHGA1 56114 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140711003 140711003 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PCDHGA1 NM_018912 exon1 c.T752C p.V251A TAAATGTCCCCGA . 62.0 14.0 65.0 0.0 . 137 PCNT 5116 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 47754602 47754602 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PCNT NM_006031 exon3 c.G559T p.V187F TTCACAGTCAGTG . 319.0 38.0 309.0 0.0 . 141 PDC 5132 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 186413279 186413279 + Silent SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PDC NM_002597 exon4 c.C573A p.I191I TTTATAGATGAGC . 164.0 13.0 92.0 0.0 . 91 PDE4DIP 9659 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 144931551 144931551 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PDE4DIP NM_001002811 exon1 c.A158G p.K53R GCACACTTGCTGC . 267.0 13.0 240.0 0.0 . 663 PDHA1 5160 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 19371270 19371270 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PDHA1 NM_001173454 exon6 c.C603T p.G201G CGGGGGCAATGGC . 308.0 54.0 325.0 1.0 . 227 PELP1 27043 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 4576104 4576104 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PELP1 NM_014389 exon16 c.G2182A p.E728K GGTTCTCAGGGCC . 64.0 26.0 78.0 0.0 . 24 PELP1 27043 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 4576404 4576404 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PELP1 NM_014389 exon16 c.G1882A p.A628T GAGCAGCACAGGT . 74.0 25.0 83.0 0.0 . 24 PHF15 23338 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 133914456 133914456 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PHF15 NM_015288 exon11 c.C1822T p.P608S CCACCACCACCAC . 74.0 19.0 92.0 0.0 . 90 PHRF1 57661 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 611702 611702 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PHRF1 NM_020901 exon18 c.C4872A p.D1624E CGTGGACAAGTAC . 81.0 9.0 66.0 0.0 . 22 PIK3C2G 5288 hgsc.bcm.edu;broad.mit.edu 37 12 18552717 18552717 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PIK3C2G NM_004570 exon15 c.C2128T p.H710Y GAAATGCATACCA . 84.0 4.0 100.0 0.0 . 1312 PIPSL 266971 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 95719293 95719293 + RNA SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . . . . . CATTTACTTTCTC . 328.0 41.0 270.0 0.0 . . PKD1L1 168507 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 47933628 47933628 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PKD1L1 NM_138295 exon15 c.G2300A p.S767N TAGTTGCTGTACA . 66.0 6.0 86.0 0.0 . 145 PKHD1 5314 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 51917941 51917941 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PKHD1 NM_170724 exon21 c.C2073T p.L691L CAGAGGGAGAAGG . 142.0 13.0 86.0 0.0 . 603 PKHD1 5314 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 51609291 51609291 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PKHD1 NM_170724 exon60 c.A10048G p.R3350G ATTTTCTTGGACT . 176.0 25.0 132.0 0.0 . 603 PKHD1L1 93035 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 8 110401347 110401347 + Frame_Shift_Del DEL T T - novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PKHD1L1 NM_177531 exon8 c.663delT p.G221fs TATGGGTTCTATG . 143.0 26.0 132.0 0.0 . 145 PLA2G4A 5321 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 186880457 186880457 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PLA2G4A NM_024420 exon7 c.T494A p.I165K AACACATAAGGGA . 269.0 17.0 157.0 1.0 . 721 PLBD1 79887 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 14706133 14706133 + Missense_Mutation SNP G G C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PLBD1 NM_024829 exon2 c.C329G p.T110S GGGGCAGTGAGGT . 137.0 13.0 100.0 0.0 . 90 PLCB3 5331 broad.mit.edu;ucsc.edu;mdanderson.org 37 11 64030000 64030000 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PLCB3 NM_000932 exon18 c.G2160A p.V720V CATCGTGGATGGC . 42.0 5.0 53.0 1.0 . 228 PLCE1 51196 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 10 95791760 95791760 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PLCE1 NM_016341 exon2 c.G957A p.K319K CAAAAAGGAGCGA . 134.0 13.0 110.0 0.0 . 229 PLG 5340 hgsc.bcm.edu;broad.mit.edu 37 6 161137785 161137785 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PLG NM_000301 exon7 c.C777T p.I259I TGACATCCCCCGC . 112.0 5.0 76.0 0.0 . 94 POM121L2 94026 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 6 27279209 27279209 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_033482 exon1 c.C741T p.G247G GAGGGTGCCACCT . 100.0 7.0 74.0 0.0 . . PRAMEF2 65122 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 12919960 12919960 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PRAMEF2 NM_023014 exon3 c.C700T p.L234F AAGACTCTTTGCA . 145.0 32.0 171.0 0.0 . 68 PRKAB2 5565 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 146634090 146634090 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PRKAB2 NM_005399 exon6 c.A601G p.R201G TGAATCTTTCCTC . 143.0 14.0 104.0 0.0 . 659 PRKCB 5579 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 16 24202416 24202416 + Frame_Shift_Del DEL G G - novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PRKCB NM_212535 exon16 c.1728delG p.M576fs GCTGATGACCAAA . 98.0 29.0 118.0 0.0 . 1530 PROS1 5627 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 93624977 93624977 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PROS1 NM_000313 exon5 c.C357A p.D119E ACACTGGTCTGGA . 201.0 30.0 191.0 1.0 . 153 PSD2 84249 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 139219614 139219614 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PSD2 NM_032289 exon14 c.G1971A p.E657E GCAGGAGGAGCAA . 159.0 18.0 173.0 0.0 . 91 PTGR1 22949 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 114348379 114348379 + Silent SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PTGR1 NM_001146108 exon5 c.A276T p.T92T GTGCGTTGTCCAG . 219.0 41.0 264.0 0.0 . 90 PTPRO 5800 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 15652426 15652426 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . PTPRO NM_002848 exon4 c.T559A p.Y187N ATGTGTTATAGTA . 172.0 39.0 152.0 1.0 . 271 PTPRQ 374462 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 81014030 81014030 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_001145026 exon29 c.A4971G p.T1657T ATGTACAGAAGGA . 189.0 53.0 175.0 0.0 . . RAB3GAP2 25782 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 220387288 220387288 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RAB3GAP2 NM_012414 exon3 c.A214G p.T72A AGGAAGTTTTTTG . 282.0 32.0 147.0 0.0 . 90 RAG1 5896 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 11 36596385 36596385 + Nonsense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RAG1 NM_000448 exon2 c.A1531T p.K511X GCTGAGAAGGTAC . 205.0 41.0 152.0 0.0 . 230 RAG2 5897 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 11 36614459 36614459 + Nonsense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RAG2 NM_001243785 exon3 c.C1260A p.C420X AGTAGGGCAGCAT . 104.0 14.0 113.0 0.0 . 95 RAI2 10742 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 17818831 17818831 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RAI2 NM_001172739 exon3 c.T1300C p.S434P CCTGGGACTCGCC . 58.0 12.0 58.0 0.0 . 131 RBM14 10432 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 66392861 66392861 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb RBM14,brain,glioma,-1 RBM14 NM_006328 exon2 c.G1514A p.G505E CCTACGGGGCCCA . 69.0 11.0 59.0 0.0 . 92 RBM19 9904 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 114296692 114296692 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RBM19 NM_001146699 exon22 c.G2568A p.G856G CAACTCCCCAAAG . 88.0 31.0 99.0 0.0 . 95 RBMX 27316 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 135957309 135957309 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RBMX NM_001164803 exon6 c.T476C p.V159A ATCACGACCATAT . 141.0 23.0 183.0 0.0 . 131 RFX6 222546 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 117248312 117248312 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RFX6 NM_173560 exon17 c.C2008T p.P670S GTGGGCCCAGTAC . 195.0 15.0 146.0 0.0 . 93 RFX7 64864 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 56394441 56394441 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RFX7 NM_022841 exon6 c.A529G p.S177G GTCCACTGTAGCA . 47.0 10.0 54.0 0.0 . 90 RGPD4 285190 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 108489237 108489237 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RGPD4 NM_182588 exon20 c.T4777A p.S1593T AGTGGATCTGAAA . 173.0 26.0 152.0 0.0 . 2 RGS7 6000 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 240966242 240966242 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RGS7 NM_002924 exon16 c.T1321A p.S441T CACTGGATCTTAT . 136.0 10.0 76.0 0.0 . 232 RGS8 85397 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 182617399 182617399 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RGS8 NM_033345 exon5 c.T287C p.F96S TCACTGAACTCCG . 223.0 20.0 121.0 0.0 . 227 RGSL1 353299 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 182442708 182442708 + Splice_Site SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RGSL1 NM_001137669 exon6 c.464-2A>G . ATTTCCAGAGTCC . 132.0 19.0 61.0 0.0 . 226 RIBC2 26150 broad.mit.edu;bcgsc.ca;mdanderson.org 37 22 45810271 45810271 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RIBC2 . . . . AGCTAGACATGAA . 94.0 19.0 66.0 0.0 . 90 RNF146 81847 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 127607830 127607830 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RNF146 NM_001242850 exon3 c.C72T p.S24S CGAGTCCTGTTCT . 326.0 34.0 207.0 0.0 . 226 RNF17 56163 broad.mit.edu;mdanderson.org 37 13 25448375 25448375 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RNF17 NM_031277 exon33 c.T4571A p.L1524Q CAAAGCTGACATT . 26.0 4.0 37.0 0.0 . 228 RP1L1 94137 hgsc.bcm.edu;bcgsc.ca 37 8 10465934 10465934 + Missense_Mutation SNP T T C rs202056828 TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RP1L1 NM_178857 exon4 c.A5674G p.T1892A CTGGGGTCTCTAC . 56.0 11.0 87.0 0.0 . 139 RPAP2 79871 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 92789745 92789745 + Nonsense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RPAP2 NM_024813 exon8 c.G1268A p.W423X CTGCCTGGAGGGA . 80.0 21.0 110.0 0.0 . 91 RPS9 6203 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 19 54705416 54705416 + Frame_Shift_Del DEL C C - novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RPS9 NM_001013 exon3 c.159delC p.I53fs CAAGATCCGCAAG . 125.0 36.0 72.0 0.0 . 153 RRBP1 6238 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 20 17616198 17616198 + Nonsense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RRBP1 NM_004587 exon7 c.G1150T p.E384X TGCTCTCCACCTG . 69.0 21.0 65.0 0.0 . 92 RSPH9 221421 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 43623341 43623341 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RSPH9 NM_152732 exon3 c.C436G p.Q146E ATTGACCAGATTG . 114.0 9.0 69.0 0.0 . 92 RTL1 388015 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 101350875 101350875 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RTL1 NM_001134888 exon1 c.C251T p.P84L TTACGTGGGCCAC . 103.0 16.0 119.0 0.0 . 46 RTN1 6252 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 60074189 60074189 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RTN1 NM_021136 exon4 c.G1787A p.R596Q ATGTCCCGCCAAT . 134.0 23.0 190.0 0.0 . 516 RUFY4 285180 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 218947924 218947924 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RUFY4 NM_198483 exon11 c.G1447A p.G483R GAGCTTGGAGGGC . 264.0 69.0 202.0 0.0 . 46 RYR2 6262 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 237982484 237982484 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RYR2 NM_001035 exon101 c.T14582C p.I4861T TGGCCATAATACA . 206.0 12.0 122.0 0.0 . 158 RYR2 6262 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 237713919 237713919 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . RYR2 NM_001035 exon27 c.G3142A p.D1048N AACAAGGACAGCC . 358.0 50.0 180.0 0.0 . 158 SASH1 23328 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 148841002 148841002 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SASH1 NM_015278 exon10 c.G1182A p.K394K GATGAAGAAGGGT . 22.0 7.0 19.0 0.0 . 90 SCLY 51540 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 238990418 238990418 + Missense_Mutation SNP C C A rs140009501 alternate_allele TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SCLY NM_016510 exon5 c.C577A p.R193S GCAGTCCGCCCGA . 139.0 28.0 101.0 0.0 C|1.000;T|0.000 92 SEC14L4 284904 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 22 30899672 30899672 + Nonsense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SEC14L4 NM_001161368 exon2 c.G122A p.W41X CGCAGCCAGCGCA . 72.0 13.0 62.0 0.0 . 91 SEC16A 9919 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 139361447 139361447 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_014866 exon6 c.T3891C p.Y1297Y TGCGTCATACTCT . 62.0 14.0 48.0 0.0 . . SEC24B 10427 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 110442311 110442311 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SEC24B NM_006323 exon13 c.C2284T p.L762L GTGAATCTATATG . 62.0 13.0 112.0 0.0 . 137 SEL1L 6400 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 81955626 81955626 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SEL1L NM_005065 exon14 c.G1365T p.M455I GTAGGCCATTCCA . 182.0 25.0 160.0 0.0 . 227 SEMA3C 10512 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 80432091 80432091 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SEMA3C NM_006379 exon9 c.A806G p.D269G CCAGTGTCATTCT . 68.0 12.0 76.0 1.0 . 515 SEMA6A 57556 hgsc.bcm.edu;bcgsc.ca 37 5 115838016 115838016 + Frame_Shift_Del DEL T T - novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SEMA6A NM_020796 exon3 c.108delA p.K36fs ATACTGTTTTGTA . 323.0 98.0 296.0 1.0 . 92 SEMA6A 57556 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 115811300 115811300 + Splice_Site SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SEMA6A NM_020796 exon17 c.1650-1G>C . GTCAGTCTTTTAA . 80.0 8.0 70.0 0.0 . 92 SETDB1 9869 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 150915464 150915464 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SETDB1 NM_012432 exon7 c.T810C p.D270D CAAAGATGGGAAT . 384.0 37.0 210.0 0.0 . 228 SFXN1 94081 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 174937183 174937183 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SFXN1 NM_022754 exon4 c.G407A p.R136K CCAACAGAAGTGG . 176.0 20.0 178.0 1.0 . 91 SHROOM4 57477 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 50345797 50345797 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SHROOM4 NM_020717 exon7 c.T3778C p.F1260L GCGAAAAGTGCTG . 92.0 19.0 152.0 0.0 . 131 SIGLEC11 114132 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 50464033 50464033 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SIGLEC11 NM_052884 exon2 c.G236A p.S79N TTTGGGCTGGTCC . 221.0 27.0 176.0 0.0 . 94 SLC13A3 64849 broad.mit.edu;ucsc.edu;bcgsc.ca 37 20 45204256 45204256 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SLC13A3 NM_022829 exon10 c.A1288T p.I430F GAAGGATGATGTT . 116.0 21.0 114.0 1.0 . 91 SLC33A1 9197 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 155571758 155571758 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SLC33A1 NM_004733 exon1 c.G29A p.S10N CGGCTGCTGTCCT . 177.0 79.0 188.0 0.0 . 156 SLC36A2 153201 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 150715069 150715069 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SLC36A2 NM_181776 exon6 c.T565C p.S189P CATTGGAATAGCA . 225.0 72.0 183.0 1.0 . 91 SLC4A2 6522 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 150773389 150773389 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SLC4A2 NM_003040 exon23 c.G3661A p.A1221T AACGAGGCAGAGC . 116.0 21.0 97.0 0.0 . 90 SLC9A2 6549 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 103300730 103300730 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SLC9A2 NM_003048 exon5 c.T1360C p.F454L GCTGTGTTTCCTC . 427.0 102.0 347.0 0.0 . 157 SLC9A4 389015 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 103090418 103090418 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SLC9A4 NM_001011552 exon1 c.T200C p.V67A ACTATGTGCAAAT . 164.0 48.0 141.0 0.0 . 92 SLC9A4 389015 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 103124608 103124608 + Silent SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SLC9A4 NM_001011552 exon5 c.C1269A p.I423I GTGCATCATTTTC . 414.0 60.0 358.0 0.0 . 92 SLC9C1 285335 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 111899481 111899481 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_183061 exon22 c.G2678T p.C893F TTTCCACAATCAA . 328.0 46.0 348.0 2.0 . . SLC9C2 284525 broad.mit.edu;bcgsc.ca 37 1 173545808 173545808 + Silent SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_178527 exon8 c.A894T p.V298V AGTAATTACAAGT . 100.0 7.0 60.0 1.0 . . SLIT1 6585 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 98764566 98764566 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SLIT1 NM_003061 exon33 c.G3594A p.E1198E ATTGTCCTCTGCC . 330.0 60.0 268.0 1.0 . 94 SLK 9748 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 105763103 105763103 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SLK NM_014720 exon9 c.A2167G p.K723E GAAAATAAAGAAG . 40.0 12.0 40.0 0.0 . 549 SMC5 23137 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 72895730 72895730 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SMC5 NM_015110 exon6 c.G734T p.R245I ATGAAAGATATAA . 35.0 5.0 31.0 0.0 . 229 SMCR7 125170 hgsc.bcm.edu;mdanderson.org 37 17 18167688 18167688 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SMCR7 NM_148886 exon4 c.G1008A p.L336L GGGGCTGGCGGGG . 14.0 12.0 8.0 0.0 . 90 SORD 6652 broad.mit.edu;bcgsc.ca 37 15 45332630 45332630 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SORD NM_003104 exon2 c.G91A p.G31S GAACCAGGCCCAA . 498.0 58.0 497.0 2.0 . 90 SPAG17 200162 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 118558673 118558673 + Missense_Mutation SNP T T G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SPAG17 NM_206996 exon29 c.A4202C p.N1401T ATCCGATTTCCTT . 218.0 49.0 320.0 0.0 . 158 SPATA31C1 441452 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 9 90535712 90535712 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_001145124 exon4 c.A890T p.E297V CGCAGGAGACTAC . 260.0 55.0 251.0 0.0 . . SPI1 6688 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 47376978 47376978 + Missense_Mutation SNP G G C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SPI1 NM_001080547 exon5 c.C616G p.H206D CCTTGTGCTTGGA . 109.0 19.0 117.0 0.0 . 226 SPIN4 139886 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 62570078 62570078 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SPIN4 NM_001012968 exon1 c.T621C p.H207H TTTGGCATGCTCC . 192.0 44.0 239.0 0.0 . 109 SPINK6 404203 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 147593570 147593570 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SPINK6 NM_205841 exon3 c.C179T p.A60V AATGTGCCTTCTG . 73.0 12.0 66.0 0.0 . 91 SPINT1 6692 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 41137074 41137074 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SPINT1 NM_181642 exon2 c.C322T p.R108C CCCGACCGCGGGG . 70.0 9.0 80.0 0.0 . 91 ST6GALNAC2 10610 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 74569415 74569415 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ST6GALNAC2 NM_006456 exon4 c.G392A p.G131D TCTGAGCCGTTCA . 46.0 9.0 52.0 0.0 . 90 STAT4 6775 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 191898231 191898231 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . STAT4 NM_001243835 exon20 c.G1837A p.D613N AATGGTCCACCCA . 128.0 36.0 92.0 0.0 . 914 STX19 415117 hgsc.bcm.edu;broad.mit.edu 37 3 93733261 93733261 + Missense_Mutation SNP A A C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . STX19 NM_001001850 exon2 c.T853G p.C285G ACCAACAACACAG . 62.0 4.0 46.0 0.0 . 90 SUPT3H 8464 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 44797582 44797582 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SUPT3H NM_181356 exon13 c.A958T p.R320W CATTCCTGCGGTA . 288.0 28.0 171.0 1.0 . 92 SURF4 6836 broad.mit.edu;bcgsc.ca 37 9 136230392 136230396 + Frame_Shift_Del DEL CCATG CCATG - novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 CCATG CCATG . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SURF4 NM_033161 exon6 c.783_787del p.261_263del TCTCATCCATGGA . 96.0 9.0 123.0 0.0 . 90 SYCP2 10388 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 20 58489028 58489028 + Splice_Site SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SYCP2 NM_014258 exon12 c.830+2T>C . AAGTTTACCTTCT . 133.0 22.0 83.0 0.0 . 525 SYNE1 23345 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 152740828 152740828 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SYNE1 NM_033071 exon40 c.A5318G p.E1773G TGGTGTTCAGCAA . 165.0 15.0 140.0 0.0 . 607 SYNGR4 23546 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 48879425 48879425 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SYNGR4 NM_012451 exon5 c.G555A p.M185I TGGCATGGTGCTG . 188.0 28.0 148.0 0.0 . 90 SYT9 143425 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 7334640 7334640 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . SYT9 NM_175733 exon3 c.G512A p.R171Q CAATCCGAAGACA . 126.0 25.0 95.0 0.0 . 155 TACR1 6869 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 75278382 75278382 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TACR1 NM_001058 exon4 c.G928A p.D310N ACCTGTCATTGAG . 383.0 106.0 361.0 1.0 . 523 TCEB3B 51224 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 44560523 44560523 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TCEB3B NM_016427 exon1 c.T1113A p.D371E AGCCATATCTACC . 58.0 10.0 98.0 0.0 . 156 TCF20 6942 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 42606358 42606358 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TCF20 NM_181492 exon1 c.G4954C p.A1652P CCTCAGCATTGAT . 326.0 34.0 317.0 0.0 . 95 TCFL5 10732 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 61488865 61488865 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TCFL5 NM_006602 exon4 c.G1120A p.G374S AAGCGCCTTGTGT . 172.0 19.0 116.0 0.0 . 581 TDRD5 163589 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 179659883 179659883 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TDRD5 NM_001199085 exon18 c.T2913C p.A971A CCGTGCTATTACA . 148.0 12.0 70.0 0.0 . 94 TEK 7010 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 27173269 27173269 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TEK NM_000459 exon6 c.A810G p.G270G CAGTGGACAAGAG . 234.0 44.0 245.0 0.0 . 1584 THBD 7056 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 20 23028767 23028767 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . THBD NM_000361 exon1 c.C1375T p.P459S TACCGGGGAGGTT . 129.0 20.0 129.0 0.0 . 90 TIAM1 7074 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 32638540 32638540 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TIAM1 NM_003253 exon5 c.G749T p.G250V TTGCTCCCCGGCC . 73.0 9.0 112.0 0.0 . 724 TIMM50 92609 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 39980382 39980382 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TIMM50 NM_001001563 exon11 c.G1293A p.E431E GGCCGAGCTCTCC . 162.0 20.0 93.0 0.0 . 91 TLL1 7092 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 166976353 166976353 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TLL1 NM_012464 exon13 c.T1650C p.N550N CTCCAATACTTTG . 69.0 14.0 112.0 0.0 . 158 TMEM132D 121256 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 129559407 129559407 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TMEM132D NM_133448 exon9 c.G2313C p.M771I AATAACCATTTCC . 269.0 14.0 251.0 0.0 . 106 TMEM132D 121256 ucsc.edu;bcgsc.ca 37 12 129559205 129559205 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TMEM132D NM_133448 exon9 c.G2515A p.G839R ACTGTCCTTCCTG . 327.0 109.0 342.0 2.0 . 106 TMEM135 65084 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 86782616 86782616 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TMEM135 NM_022918 exon3 c.G321A p.L107L CGCTCTGCCAGCA . 62.0 7.0 73.0 0.0 . 514 TMEM52B 120939 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 10339065 10339065 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_153022 exon3 c.T124C p.S42P CTGACGTCCCTGT . 152.0 24.0 125.0 0.0 . . TRAPPC8 22878 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 29511372 29511372 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TRAPPC8 NM_014939 exon2 c.A272T p.D91V ACAACATCATTCA . 129.0 18.0 165.0 0.0 . 159 TREML4 285852 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 41196565 41196565 + Silent SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TREML4 NM_198153 exon2 c.T177C p.S59S GACATCTCCAAGT . 125.0 17.0 80.0 0.0 . 90 TRHDE 29953 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 72936136 72936136 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TRHDE NM_013381 exon7 c.A1653G p.Q551Q TTTGCAAGTAAGT . 35.0 9.0 26.0 0.0 . 93 TRPV4 59341 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 110230527 110230527 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TRPV4 NM_021625 exon11 c.G1754T p.G585V ATCCAGCCCAGGA . 155.0 17.0 123.0 0.0 . 94 TSSC4 10078 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 2424378 2424378 + Missense_Mutation SNP A A C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TSSC4 NM_005706 exon2 c.A515C p.E172A TGACCGAGGTCAG . 90.0 9.0 99.0 0.0 . 90 TTN 7273 broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 179616369 179616369 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TTN NM_133379 exon46 c.A10758T p.E3586D AGACCCTTCACTA . 123.0 33.0 102.0 1.0 . 636 TTN 7273 broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 179648982 179648982 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TTN NM_001267550 exon16 c.G2590A p.V864M GCTTCACAGTAGG . 242.0 68.0 202.0 2.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179494968 179494968 + Missense_Mutation SNP G G A rs192766485 TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TTN NM_001267550 exon239 c.C44281T p.P14761S ACTTACGCTTAAC . 60.0 11.0 55.0 0.0 G|0.999;A|0.001 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179569674 179569674 + Missense_Mutation SNP C C A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TTN NM_001267550 exon104 c.G29624T p.R9875M TCTGACCTCTCTA . 258.0 34.0 183.0 0.0 . 636 TUBA1A 7846 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 49578875 49578875 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TUBA1A NM_001270399 exon4 c.T1274C p.M425T GCAGCCATGTCCT . 336.0 90.0 348.0 0.0 . 90 TUBA3C 7278 broad.mit.edu;ucsc.edu;bcgsc.ca 37 13 19753559 19753559 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TUBA3C NM_006001 exon2 c.A148G p.N50D ACGTGTTGAAGGA . 292.0 75.0 368.0 1.0 . 95 TUBA4A 7277 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 220116022 220116022 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . TUBA4A NM_006000 exon4 c.G399C p.Q133H GAAGCCCTGAAGT . 111.0 10.0 84.0 0.0 . 93 UBA1 7317 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 47062208 47062208 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . UBA1 NM_153280 exon11 c.A1228G p.M410V GAAGTCATGAAGG . 102.0 17.0 84.0 0.0 . 227 UBASH3B 84959 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 122659819 122659819 + Silent SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . UBASH3B NM_032873 exon6 c.C783T p.V261V ACAGGTCATCTAC . 130.0 56.0 145.0 1.0 . 68 UBE4A 9354 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 118263565 118263565 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . UBE4A NM_004788 exon19 c.C3050T p.S1017F CATCTTCCAGAGT . 128.0 74.0 146.0 1.0 . 229 UFL1 23376 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 96973201 96973201 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_015323 exon4 c.A281T p.E94V ATATTGAAAATAG . 175.0 41.0 176.0 1.0 . . UNC80 285175 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 210786230 210786230 + Missense_Mutation SNP T T G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . UNC80 NM_032504 exon33 c.T5152G p.F1718V AAATCCTTTTCAG . 146.0 17.0 110.0 0.0 . 90 USH2A 7399 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 216172333 216172333 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . USH2A NM_206933 exon34 c.C6553A p.H2185N AATCATGTGTATG . 227.0 22.0 115.0 0.0 . 115 USP20 10868 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 9 132632035 132632035 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . USP20 NM_001008563 exon14 c.T1477C p.Y493H GCCATCTACCAGA . 176.0 8.0 260.0 0.0 . 658 USP53 54532 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 120192951 120192951 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . USP53 NM_019050 exon15 c.A1936T p.M646L GATGAAATGAAGC . 101.0 16.0 132.0 0.0 . 660 VAT1L 57687 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 77859180 77859180 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . VAT1L NM_020927 exon3 c.C401T p.A134V ACAATGCCTGGGC . 250.0 43.0 292.0 0.0 . 90 VPS13C 54832 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 62219327 62219327 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . VPS13C NM_020821 exon52 c.C6479T p.P2160L AGAAAAGGGCAAG . 117.0 17.0 142.0 0.0 . 92 VPS45 11311 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 150054035 150054035 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . VPS45 NM_007259 exon9 c.A892G p.K298E AAGAAGAAACCAA . 205.0 14.0 129.0 0.0 . 91 VPS52 6293 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 33236937 33236937 + Missense_Mutation SNP C C G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . VPS52 NM_022553 exon6 c.G402C p.Q134H GTCACTCTGAAAA . 285.0 49.0 199.0 1.0 . 95 VWA5A 4013 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 124016605 124016605 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . VWA5A NM_014622 exon18 c.A2314T p.I772F GCTGCTATTACTT . 193.0 28.0 177.0 1.0 . 92 WDR87 83889 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 38382236 38382236 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_031951 exon5 c.C3233T p.P1078L TTGCTGGGCTTGA . 201.0 30.0 158.0 0.0 . . WDR96 80217 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 105952057 105952057 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . WDR96 NM_025145 exon12 c.T1446C p.Y482Y CTGATCATAACTA . 75.0 19.0 69.0 0.0 . 95 WNT8A 7478 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 137426301 137426301 + Missense_Mutation SNP G G C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . WNT8A NM_058244 exon6 c.G595C p.A199P CAGCTGGCTGAAT . 144.0 17.0 124.0 0.0 . 524 ZC3H18 124245 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 88643755 88643755 + Missense_Mutation SNP A A C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZC3H18 NM_144604 exon2 c.A224C p.E75A CAAGTGAGCCTAA . 52.0 9.0 83.0 0.0 . 69 ZC3H6 376940 broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 113082723 113082723 + Missense_Mutation SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZC3H6 NM_198581 exon11 c.G2035A p.D679N CAAGAAGATGAAG . 414.0 126.0 350.0 2.0 . 93 ZFP2 80108 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 178359572 178359572 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZFP2 NM_030613 exon5 c.A1258G p.I420V GCCTTCATTAAGA . 52.0 7.0 50.0 0.0 . 93 ZFP30 22835 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 38127120 38127120 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZFP30 NM_014898 exon6 c.A322G p.R108G TAATTCTTTCCAT . 142.0 38.0 121.0 1.0 . 90 ZHX3 23051 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 39833219 39833219 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZHX3 NM_015035 exon3 c.G338A p.G113E CTGCACCCACTGC . 96.0 20.0 84.0 0.0 . 93 ZNF135 7694 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 58578913 58578913 + Missense_Mutation SNP A A T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNF135 NM_007134 exon4 c.A1133T p.Y378F AACCCTATCAGTG . 188.0 26.0 138.0 0.0 . 91 ZNF222 7673 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 44536345 44536345 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNF222 NM_001129996 exon4 c.A638G p.Y213C AATGCTATAAGTG . 267.0 30.0 200.0 0.0 . 93 ZNF280C 55609 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 X 129349772 129349772 + Missense_Mutation SNP T T A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNF280C NM_017666 exon14 c.A1831T p.N611Y TTATGTTCTTCAA . 78.0 14.0 82.0 0.0 . 132 ZNF426 79088 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9641667 9641667 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNF426 NM_024106 exon7 c.A402G p.I134M CAATTGTATCCCA . 91.0 9.0 87.0 0.0 . 91 ZNF439 90594 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 11978948 11978948 + Missense_Mutation SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNF439 NM_152262 exon3 c.A1064G p.E355G CTTATGAATGTAA . 94.0 11.0 76.0 0.0 . 91 ZNF441 126068 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 11888524 11888524 + Silent SNP G G A novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNF441 NM_152355 exon2 c.G102A p.Q34Q GATGCAGGAAACC . 191.0 19.0 180.0 0.0 . 69 ZNF518B 85460 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 10445461 10445461 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNF518B NM_053042 exon3 c.G2492A p.G831E ATTGGCCCCCTTT . 136.0 27.0 127.0 0.0 . 72 ZNF578 147660 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 53014631 53014631 + Missense_Mutation SNP C C T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . NM_001099694 exon6 c.C997T p.H333Y ACATGCCATCATA . 218.0 37.0 163.0 0.0 . . ZNF608 57507 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 123983011 123983011 + Silent SNP A A G novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNF608 NM_020747 exon4 c.T3066C p.S1022S GCTCCCACTATTT . 170.0 31.0 161.0 0.0 . 229 ZNF714 148206 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 21299624 21299624 + Missense_Mutation SNP T T C novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNF714 NM_182515 exon5 c.T154C p.S52P TGTTCTTCTTTTA . 76.0 42.0 79.0 0.0 . 67 ZNF821 55565 broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 71913830 71913830 + Missense_Mutation SNP G G T novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNF821 NM_001201556 exon3 c.C20A p.T7K GGATTTGTCTGTT . 168.0 31.0 173.0 2.0 . 23 ZNHIT6 54680 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 86123530 86123530 + Missense_Mutation SNP C C A rs139368369 TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . ZNHIT6 NM_017953 exon9 c.G1372T p.V458L ACTTACCTTGGTG . 54.0 13.0 55.0 0.0 C|1.000;A|0.000 153 TNNT3 7140 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 1955022 1955023 + Silent DNP CC CC AA novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 CC CC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . . . . p.E92E TGAAGCCCGGAAG . 218.0 26.0 178.0 0.0 . . HERC2 8924 broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 28443786 28443787 + Missense_Mutation DNP CC CC AA novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 CC CC . . . . . Untested Somatic Phase_I WXS none . . Illumina GAIIx 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . . . . p.G2616C AGGTGCCCCCTTT . 404.0 76.0 438.0 2.0 . . CADPS 8618 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 62522190 62522191 + Missense_Mutation DNP TG TG AT novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 TG TG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . . . . p.H678I GAAGCGTGGTCAA . 135.0 62.0 211.0 0.0 . . POU3F2 5454 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 99283906 99283907 + Nonsense_Mutation DNP CC CC AA novel TCGA-DD-A3A9-01A-11D-A25V-10 TCGA-DD-A3A9-11A-11D-A25V-10 CC CC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 96517058-18d2-4847-8085-768ca8aa1565 790941e2-4315-4425-9eeb-9b3ae2377bcb . . . . . p.S386* TCACCTCCCTCGC . 129.0 48.0 78.0 0.0 . .