Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq
ABHD10	55347	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	111710276	111710279	+	Frame_Shift_Del	DEL	CTGA	CTGA	-	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	CTGA	CTGA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ABHD10	NM_018394	exon5	c.629_632del	p.210_211del	AATACTCTGAAGA	.	211.0	83.0	96.0	0.0	.	90
ACTRT1	139741	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	127185963	127185963	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ACTRT1	NM_138289	exon1	c.G223A	p.E75K	CACGCTCAATGGG	.	322.0	215.0	56.0	0.0	.	133
ADAM11	4185	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	42855379	42855379	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ADAM11	NM_002390	exon24	c.T2130A	p.S710R	CTGCAGTATCCAT	.	62.0	29.0	40.0	0.0	.	227
ADAMTS8	11095	broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	130297694	130297694	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ADAMTS8	NM_007037	exon1	c.G488A	p.R163Q	GGTCCTCGCGGGA	.	61.0	28.0	46.0	1.0	.	226
ALDH18A1	5832	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	97402774	97402774	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ALDH18A1	NM_001017423	exon3	c.G278A	p.G93E	AAGCGCCCCAGGG	.	73.0	32.0	41.0	0.0	.	117
ALMS1	7840	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	73717941	73717941	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ALMS1	NM_015120	exon10	c.G8852C	p.G2951A	CTCAAGGTCAGGA	.	86.0	33.0	62.0	0.0	.	142
ANK1	286	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	41573290	41573290	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ANK1	NM_001142446	exon14	c.1581delC	p.A527fs	GGGGTTGGCGTTA	.	145.0	68.0	69.0	0.0	.	716
ARHGEF40	55701	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	14	21543017	21543017	+	Silent	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ARHGEF40	NM_018071	exon3	c.C1128G	p.G376G	AACAGGCAAAGGA	.	33.0	20.0	34.0	0.0	.	228
ATAD5	79915	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	29162318	29162318	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ATAD5	NM_024857	exon2	c.T1219C	p.F407L	AAAGCATTTAGGC	.	152.0	55.0	103.0	0.0	.	93
ATF7IP2	80063	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	10574815	10574815	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ATF7IP2	NM_001256160	exon11	c.A1562G	p.Q521R	AAATGCAGTCCAG	.	77.0	27.0	52.0	0.0	.	186
BRCC3	79184	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	154299926	154299926	+	Splice_Site	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	BRCC3	NM_001018055	exon1	c.123+1G>A	.	GGGGAGGTGAGTA	.	146.0	42.0	18.0	0.0	.	706
C10orf90	118611	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	128193357	128193357	+	Missense_Mutation	SNP	C	C	A	rs199676174	alternate_allele	TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	C10orf90	NM_001004298	exon3	c.G412T	p.A138S	TGGATGCAAACCC	.	55.0	21.0	36.0	0.0	C|1.000;G|0.000	92
C2CD4C	126567	broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	408323	408323	+	Silent	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	C2CD4C	NM_001136263	exon2	c.G39T	p.R13R	AGACCCCCGAAGC	.	128.0	58.0	100.0	1.0	.	46
C2CD5	9847	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	22606893	22606893	+	Silent	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_014802	exon24	c.G2808C	p.G936G	AGCATTCCCTCCT	.	220.0	83.0	91.0	0.0	.	.
C3orf72	401089	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	3	138669225	138669225	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	C3orf72	NM_001040061	exon3	c.C339T	p.L113L	ACCACTCAGCTCG	.	26.0	9.0	34.0	0.0	.	22
C4orf21	55345	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	113510881	113510881	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	C4orf21	NM_018392	exon11	c.G3126C	p.E1042D	ACTACCCTCCAAG	.	150.0	107.0	151.0	0.0	.	90
C6orf118	168090	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	165715292	165715292	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	C6orf118	NM_144980	exon2	c.G519T	p.R173S	TTCCCTCCTGCGC	.	42.0	19.0	27.0	0.0	.	90
C7orf61	402573	hgsc.bcm.edu;broad.mit.edu	37	7	100054424	100054425	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_001004323	exon3	c.572_573insC	p.R191fs	TTGGGTCGGGGGG	.	96.0	19.0	29.0	0.0	.	.
CADPS	8618	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	62739120	62739120	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	CADPS	NM_003716	exon3	c.G884C	p.C295S	ACCTGGCAGGCAT	.	93.0	45.0	34.0	0.0	.	281
CCDC14	64770	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	123650008	123650008	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	CCDC14	NM_022757	exon11	c.A1740G	p.I580M	CCCCAATATCTGG	.	340.0	125.0	217.0	0.0	.	68
CCDC169-SOHLH2	100526761	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	36776092	36776092	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_001198910	exon7	c.T418C	p.C140R	ATATGCAATCATC	.	130.0	49.0	56.0	0.0	.	.
CCDC65	85478	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	49312509	49312509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	CCDC65	NM_033124	exon6	c.C849A	p.S283R	ACACAGCCGTGAG	.	104.0	45.0	93.0	0.0	.	92
CHAT	1103	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	50827803	50827803	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	CHAT	NM_020549	exon3	c.G420C	p.Q140H	GCTGCAGCAGACC	.	30.0	13.0	27.0	0.0	.	514
CHD4	1108	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	6710565	6710565	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	CHD4	NM_001273	exon6	c.C689T	p.A230V	GCTGCTGCCGCAG	.	74.0	25.0	53.0	0.0	.	228
CHDC2	286464	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	X	36122659	36122659	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_173695	exon8	c.T896C	p.M299T	ATAATATGCCCCC	.	473.0	21.0	231.0	0.0	.	.
COL19A1	1310	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	70852682	70852682	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	COL19A1	NM_001858	exon23	c.C1596T	p.S532S	AGGCTCCATGGGA	.	77.0	29.0	54.0	0.0	.	156
COMMD3-BMI1	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	22618024	22618024	+	Silent	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_001204062	exon13	c.A1047G	p.L349L	TACACTAATGGAT	.	172.0	56.0	115.0	0.0	.	.
COPA	1314	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	160295377	160295377	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	COPA	NM_001098398	exon7	c.G562A	p.D188N	ATAGATCAACCCC	.	287.0	176.0	95.0	1.0	.	92
COPS6	10980	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	99686935	99686935	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	COPS6	NM_006833	exon2	c.C99T	p.C33C	GGCCTGCGGAGTG	.	157.0	50.0	34.0	0.0	.	658
CST11	140880	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	23431159	23431159	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	CST11	NM_130794	exon3	c.G401C	p.S134T	CTGCAGCTTTTGT	.	148.0	64.0	91.0	0.0	.	90
CTNNB1	1499	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	41266132	41266133	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	CTNNB1,NS,carcinoma,+1	CTNNB1	NM_001098210	exon3	c.129_130insC	p.A43fs	CACAGCTCCTTCT	.	229.0	29.0	102.0	0.0	.	24361
CTNNB1	1499	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	41266138	41266138	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	CTNNB1,NS,carcinoma,+2	CTNNB1	NM_001098209	exon3	c.135delT	p.S45fs	TCCTTCTCTGAGT	.	232.0	31.0	106.0	0.0	.	24361
CTNNB1	1499	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	41266138	41266138	+	Silent	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	CTNNB1,NS,carcinoma,+2	CTNNB1	NM_001098209	exon3	c.T135C	p.S45S	TCCTTCTCTGAGT	.	228.0	62.0	103.0	0.0	.	24361
CTNNB1	1499	hgsc.bcm.edu;ucsc.edu	37	3	41266135	41266135	+	Silent	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	CTNNB1,NS,carcinoma,+2	CTNNB1	NM_001098209	exon3	c.T132C	p.P44P	AGCTCCTTCTCTG	.	231.0	72.0	105.0	0.0	.	24361
CTNNB1	1499	hgsc.bcm.edu;ucsc.edu	37	3	41266137	41266137	+	Missense_Mutation	SNP	C	C	T	rs121913409	bycluster	TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	CTNNB1,NS,carcinoma,+1	CTNNB1	NM_001098209	exon3	c.C134T	p.S45F	CTCCTTCTCTGAG	.	232.0	52.0	106.0	1.0	.	24361
CYP11A1	1583	broad.mit.edu;bcgsc.ca	37	15	74637399	74637399	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	CYP11A1	NM_000781	exon3	c.G611A	p.R204H	GCAAAGCGGAACA	.	90.0	6.0	38.0	0.0	.	92
CYP2A6	1548	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	19	41354534	41354534	+	Missense_Mutation	SNP	G	G	T	rs60563539		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	CYP2A6	NM_000762	exon3	c.C478A	p.L160I	CCCGGAGGGCGTC	.	63.0	7.0	56.0	0.0	.	92
DCAF4L2	138009	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	88885240	88885242	+	In_Frame_Del	DEL	CAC	CAC	-	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	CAC	CAC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	DCAF4L2	NM_152418	exon1	c.958_960del	p.320_320del	CACATGCACGGGT	.	205.0	26.0	111.0	0.0	.	91
DCAF4L2	138009	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	88885245	88885246	+	Frame_Shift_Del	DEL	GT	GT	-	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	GT	GT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	DCAF4L2	NM_152418	exon1	c.954_955del	p.318_319del	GCACGGGTAGGTA	.	214.0	27.0	114.0	0.0	.	91
DCAF6	55827	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	168014320	168014320	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	DCAF6	NM_001198956	exon16	c.G2113C	p.E705Q	AATCCTGAGCCTC	.	389.0	225.0	134.0	0.0	.	516
DNAH8	1769	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	38810541	38810541	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	DNAH8	NM_001206927	exon35	c.G4707A	p.M1569I	AATGATGACCAAT	.	319.0	67.0	84.0	0.0	.	615
DRP2	1821	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	X	100513348	100513348	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	DRP2	NM_001939	exon22	c.C2441G	p.A814G	AGGCAGCTGAGGC	.	222.0	132.0	51.0	0.0	.	132
EIF3E	3646	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	109229595	109229595	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	EIF3E	NM_001568	exon8	c.G817T	p.V273F	TTAGAACCTGCCG	.	46.0	12.0	18.0	0.0	.	188
EIF4E1B	253314	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	176070173	176070173	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_001099408	exon4	c.C106A	p.P36T	AAGTCTCCAAACT	.	185.0	72.0	113.0	0.0	.	.
ERO1LB	56605	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	236416758	236416758	+	Silent	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ERO1LB	NM_019891	exon3	c.T270C	p.C90C	TATTGAACAGTGG	.	360.0	82.0	131.0	2.0	.	90
F2	2147	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	46747715	46747715	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	F2	NM_000506	exon7	c.A866G	p.N289S	ACCTCAACTATTG	.	27.0	12.0	24.0	0.0	.	93
FAM188A	80013	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	15858832	15858832	+	Splice_Site	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	FAM188A	NM_024948	exon11	c.882+2T>C	.	AAGCATACCTTGG	.	162.0	57.0	87.0	0.0	.	228
FANK1	92565	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	127684064	127684064	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	FANK1	NM_145235	exon4	c.G395C	p.G132A	TTCAAGGAGGGTG	.	521.0	210.0	254.0	0.0	.	91
FAT3	120114	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	92616349	92616349	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	FAT3	NM_001008781	exon23	c.A12727G	p.S4243G	TTCCAGAGTGACT	.	26.0	17.0	23.0	0.0	.	73
FCRL2	79368	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	157739786	157739786	+	Silent	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	FCRL2	NM_030764	exon4	c.C465T	p.G155G	GCTCCAGCCTGAC	.	392.0	223.0	94.0	0.0	.	92
FRG1	2483	broad.mit.edu;mdanderson.org	37	4	190874235	190874235	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	FRG1	NM_004477	exon4	c.C272G	p.P91R	AGGGCCCTAGTCC	.	1922.0	120.0	910.0	1.0	.	90
GAL3ST3	89792	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	11	65810799	65810799	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	GAL3ST3	NM_033036	exon3	c.G475T	p.E159X	GCGACTCGAACAT	.	34.0	9.0	43.0	0.0	.	91
GNB5	10681	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	52418147	52418147	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	GNB5	NM_016194	exon11	c.G1007T	p.S336I	TTACCACTGAGGG	.	213.0	79.0	76.0	0.0	.	227
GPRIN2	9721	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	46999358	46999358	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	GPRIN2	NM_014696	exon3	c.G478A	p.G160S	CCAGGTGGTACTT	.	37.0	7.0	30.0	0.0	.	90
H2AFY	9555	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	134724771	134724771	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	H2AFY	NM_138610	exon2	c.G13A	p.G5S	TCCCACCGCGGCT	.	52.0	21.0	24.0	0.0	.	90
HIST1H4G	8369	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	26246995	26246995	+	Missense_Mutation	SNP	C	C	T	rs140916075		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	HIST1H4G	NM_003547	exon1	c.G211A	p.V71M	TGGTCACGGCGTA	.	223.0	120.0	82.0	0.0	C|1.000;T|0.000	68
HIVEP1	3096	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	12162108	12162108	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	HIVEP1	NM_002114	exon8	c.G6924T	p.E2308D	CCCTGAGTCAGAA	.	346.0	81.0	85.0	0.0	.	139
IGFBP4	3487	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	17	38600272	38600272	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	IGFBP4	NM_001552	exon1	c.C285A	p.H95Q	GATGCACGGGCAA	.	22.0	8.0	17.0	0.0	.	522
IRAK3	11213	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	66641584	66641584	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	IRAK3	NM_007199	exon12	c.C1424A	p.P475Q	ATGTACCAAGTAT	.	274.0	97.0	185.0	2.0	.	1379
IRF2	3660	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	185340688	185340688	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	IRF2	NM_002199	exon3	c.C122T	p.A41V	CTAGCCGCATGCA	.	61.0	12.0	33.0	0.0	.	91
ITIH2	3698	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	7773850	7773850	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ITIH2	NM_002216	exon13	c.1538delT	p.V513fs	CGGACGTCACTCA	.	81.0	39.0	53.0	0.0	.	93
KCMF1	56888	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	85255054	85255054	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	KCMF1	NM_020122	exon2	c.G59A	p.R20H	GAGGTCGCAGATA	.	258.0	103.0	166.0	0.0	.	24
KCTD8	386617	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	4	44449751	44449751	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	KCTD8	NM_198353	exon1	c.A790T	p.K264X	TGTACTTCTCCGG	.	55.0	16.0	53.0	0.0	.	92
KDM1B	221656	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	18215297	18215297	+	Silent	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	KDM1B	NM_153042	exon16	c.C1473A	p.T491T	GAGGACCCTGGAT	.	141.0	30.0	51.0	0.0	.	91
KNDC1	85442	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	134981785	134981785	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	KNDC1	NM_152643	exon3	c.C329A	p.P110H	TTCCCCCCGAGTT	.	43.0	13.0	27.0	0.0	.	229
LAMC1	3915	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	183093943	183093943	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	LAMC1	NM_002293	exon14	c.A2579G	p.Y860C	GCTTCTATTGTGA	.	221.0	48.0	77.0	0.0	.	252
LMNB1	4001	broad.mit.edu;ucsc.edu;mdanderson.org	37	5	126145938	126145938	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	LMNB1	NM_005573	exon4	c.G709T	p.E237X	CAAATTGAGTATG	.	102.0	37.0	69.0	1.0	.	226
LPA	4018	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	161006134	161006134	+	Silent	SNP	A	A	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	LPA	NM_005577	exon27	c.T4233G	p.S1411S	CGACCAAGACTGA	.	216.0	66.0	91.0	0.0	.	74
MACC1	346389	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	20199410	20199410	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	MACC1	NM_182762	exon5	c.T574A	p.C192S	CAAGGCAGGAGCG	.	175.0	41.0	93.0	0.0	.	93
MACROD1	28992	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	63918758	63918758	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	MACROD1	NM_014067	exon3	c.T470C	p.L157P	CTGCGGAGCAGGG	.	116.0	44.0	63.0	0.0	.	68
MAPK7	5598	broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	19285441	19285441	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	MAPK7	NM_002749	exon5	c.C1825T	p.P609S	CCTGGCCCTGTAG	.	124.0	43.0	111.0	1.0	.	1402
MFSD5	84975	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	53647509	53647509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	MFSD5	NM_001170790	exon2	c.C1211A	p.S404Y	GCTCTTCCCTGTA	.	141.0	52.0	62.0	0.0	.	93
MIR519D	574480	broad.mit.edu;ucsc.edu;mdanderson.org	37	19	54216629	54216629	+	RNA	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	.	.	.	.	GGGAAGCGCTTTC	.	229.0	79.0	142.0	0.0	.	.
MLL2	8085	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	49449093	49449100	+	Frame_Shift_Del	DEL	CTTCTGGC	CTTCTGGC	-	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	CTTCTGGC	CTTCTGGC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	MLL2	NM_003482	exon1	c.8_15del	p.3_5del	AGCCAGCTTCTGG	.	90.0	26.0	93.0	0.0	.	612
MLL3	58508	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	7	151884488	151884488	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	MLL3	NM_170606	exon33	c.G4867T	p.E1623X	CTCCTTCCACAGT	.	212.0	112.0	94.0	0.0	.	1398
MUC16	94025	broad.mit.edu;ucsc.edu;mdanderson.org	37	19	9057202	9057202	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	MUC16	NM_024690	exon3	c.G30244T	p.E10082X	GTATTTCAACTGA	.	209.0	70.0	106.0	1.0	.	566
MUC5B	727897	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	1280240	1280240	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_002458	exon44	c.C16662A	p.D5554E	CCAGGACCCAACG	.	30.0	10.0	25.0	0.0	.	.
MUC5B	727897	ucsc.edu;bcgsc.ca	37	11	1261426	1261426	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_002458	exon30	c.A3791G	p.E1264G	CCTATGAGGACAG	.	36.0	5.0	37.0	1.0	.	.
MYBL2	4605	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	42331511	42331511	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	MYBL2	NM_002466	exon8	c.C1333G	p.P445A	AGCACACCTGTTA	.	124.0	39.0	70.0	0.0	.	415
MYT1L	23040	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	1796112	1796112	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	MYT1L	NM_015025	exon24	c.A3395G	p.N1132S	TGGATGTTAGCCA	.	214.0	81.0	60.0	1.0	.	95
NAALAD2	10003	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	89924847	89924847	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	NAALAD2	NM_005467	exon19	c.A2155G	p.K719E	GAAGTAAAGAAAC	.	109.0	39.0	48.0	0.0	.	92
NAPEPLD	222236	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	102743978	102743978	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	NAPEPLD	NM_001122838	exon5	c.G1080A	p.K360K	ATTCAGCTTCACT	.	548.0	154.0	191.0	1.0	.	227
NCAPD3	23310	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	134073725	134073725	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	NCAPD3	NM_015261	exon11	c.T1292C	p.L431P	AAGGAGAGGGTGT	.	133.0	46.0	70.0	2.0	.	229
NEDD4L	23327	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	55996342	55996342	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	NEDD4L	NM_015277	exon10	c.G796C	p.G266R	TCGGAGGGCGGGG	.	63.0	28.0	57.0	0.0	.	658
NEK11	79858	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	130748574	130748574	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	NEK11	NM_024800	exon3	c.G22T	p.A8S	GAGGCAGCTAAGT	.	188.0	89.0	79.0	0.0	.	848
NID2	22795	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	52509060	52509060	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	NID2	NM_007361	exon7	c.C1588A	p.H530N	CTCGGTGAGGTGC	.	68.0	34.0	23.0	0.0	.	158
NPAS4	266743	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	66191452	66191452	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	NPAS4	NM_178864	exon7	c.C1091T	p.T364I	TCTTCACCGCAGC	.	58.0	24.0	35.0	0.0	.	90
NTNG1	22854	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	107937923	107937923	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	NTNG1	NM_014917	exon4	c.C1035T	p.P345P	TCTCCCCATCCCC	.	125.0	54.0	48.0	0.0	.	140
NUDT14	256281	hgsc.bcm.edu;bcgsc.ca	37	14	105643003	105643004	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	NUDT14	NM_177533	exon4	c.296_297insG	p.V99fs	ACTGTCACCCCCG	.	48.0	18.0	48.0	0.0	.	91
OBSCN	84033	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	228529240	228529240	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	OBSCN	NM_001271223	exon85	c.C20830T	p.R6944W	CAGGCACGGACAG	.	84.0	25.0	33.0	0.0	.	403
OR10G7	390265	broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	123909593	123909593	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	OR10G7	NM_001004463	exon1	c.G116T	p.G39V	AGGTTCCCCAGCA	.	553.0	245.0	174.0	1.0	.	70
OR2J3	442186	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	29080433	29080433	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	OR2J3	NM_001005216	exon1	c.A766T	p.I256F	TTTTTCATTCCGG	.	868.0	202.0	181.0	1.0	.	90
OR2L13	284521	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	248262994	248262994	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	OR2L13	NM_175911	exon3	c.T317C	p.M106T	TGACCATGGCGTG	.	311.0	169.0	91.0	0.0	.	70
OR2T27	403239	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	248813316	248813316	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	OR2T27	NM_001001824	exon1	c.C870A	p.Y290X	AAGGCTGTAAATG	.	573.0	83.0	197.0	0.0	.	47
OR2T4	127074	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	248525893	248525893	+	Silent	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	OR2T4	NM_001004696	exon1	c.A1011G	p.L337L	AATGTTAACAGTG	.	689.0	225.0	257.0	0.0	.	68
OR51L1	119682	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	5020988	5020988	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	OR51L1	NM_001004755	exon1	c.G776A	p.G259E	TTATTGGGGTGTC	.	361.0	162.0	162.0	0.0	.	69
OR52E2	119678	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	5079905	5079905	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	OR52E2	NM_001005164	exon1	c.A953T	p.E318V	AGGTACTCTTCCT	.	121.0	34.0	66.0	0.0	.	71
OR52H1	390067	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	5566529	5566529	+	Silent	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	OR52H1	NM_001005289	exon1	c.C225A	p.A75A	AGTCATGGCCAGC	.	212.0	80.0	93.0	0.0	.	114
PARP11	57097	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	3939168	3939168	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PARP11	NM_020367	exon2	c.C35G	p.A12G	TCTTCTGCTTTGT	.	178.0	77.0	126.0	0.0	.	523
PCDH10	57575	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	134071720	134071720	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PCDH10	NM_032961	exon1	c.C425A	p.P142H	GCTTCCCCTTGGA	.	51.0	22.0	32.0	0.0	.	92
PCYOX1L	78991	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	148745666	148745666	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PCYOX1L	NM_024028	exon4	c.C632G	p.A211G	TTTCTGCTGTCCT	.	73.0	28.0	31.0	0.0	.	91
PIEZO2	63895	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	18	10696431	10696440	+	Frame_Shift_Del	DEL	CAGTGTCAGC	CAGTGTCAGC	-	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	CAGTGTCAGC	CAGTGTCAGC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_022068	exon42	c.6586_6595del	p.2196_2199del	AGTCCACAGTGTC	.	96.0	19.0	68.0	0.0	.	.
PLEKHG4B	153478	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	140645	140645	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PLEKHG4B	NM_052909	exon1	c.C223T	p.R75W	GCAGGGCGGACTC	.	153.0	67.0	100.0	0.0	.	228
PLEKHG7	440107	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	12	93148009	93148009	+	Nonsense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PLEKHG7	NM_001004330	exon6	c.C459G	p.Y153X	GATCTACTCCATC	.	111.0	40.0	63.0	0.0	.	23
PLXNB3	5365	ucsc.edu;bcgsc.ca	37	X	153039047	153039047	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PLXNB3	NM_001163257	exon20	c.A3227G	p.E1076G	GGCTGGAGGCTGA	.	102.0	24.0	33.0	1.0	.	130
PMEPA1	56937	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	56227217	56227217	+	Silent	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PMEPA1	NM_020182	exon4	c.G756T	p.P252P	GGAGGGCGGCCCA	.	46.0	20.0	43.0	0.0	.	227
POTEC	388468	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	18	14542729	14542729	+	Silent	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	POTEC	NM_001137671	exon1	c.T417C	p.D139D	GTCCAGATCTTCT	.	906.0	360.0	327.0	0.0	.	3
PRADC1	84279	broad.mit.edu;mdanderson.org	37	2	73456589	73456589	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PRADC1	NM_032319	exon3	c.G278C	p.G93A	CCTTACCCCCTCT	.	56.0	21.0	15.0	0.0	.	90
PRKG1	5592	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	52834527	52834527	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PRKG1	NM_006258	exon1	c.G177T	p.Q59H	CCAGCAGGCGCAG	.	166.0	70.0	113.0	1.0	.	523
PRPF4B	8899	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	4053106	4053106	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PRPF4B	NM_003913	exon11	c.T2465C	p.L822P	ATATCCTGGTAAG	.	181.0	46.0	44.0	1.0	.	1308
PRSS16	10279	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	27218524	27218524	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PRSS16	NM_005865	exon5	c.G530T	p.S177I	CCTCCAGCCCCTG	.	179.0	45.0	42.0	1.0	.	94
PTPRR	5801	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	71139795	71139795	+	Silent	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	PTPRR	NM_002849	exon6	c.C810T	p.H270H	CGATAGGTGGATC	.	697.0	276.0	302.0	0.0	.	652
RABIF	5877	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	202858125	202858125	+	Silent	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	RABIF	NM_002871	exon1	c.G102C	p.G34G	AGCGGTCCCTGGC	.	109.0	54.0	89.0	1.0	.	227
RFC1	5981	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	39322038	39322038	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	RFC1	NM_002913	exon9	c.C1060G	p.P354A	TCTTAGGAGTTTT	.	267.0	108.0	166.0	0.0	.	230
SACS	26278	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	13	23905027	23905027	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SACS	NM_014363	exon10	c.A12988G	p.R4330G	ACCGCCTAATAAT	.	271.0	14.0	139.0	0.0	.	298
SCN10A	6336	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	38835301	38835301	+	Silent	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SCN10A	NM_006514	exon1	c.T201C	p.Y67Y	CTCACCATAGAAC	.	335.0	149.0	122.0	0.0	.	99
SDK2	54549	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	17	71382609	71382609	+	Silent	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SDK2	NM_001144952	exon31	c.G4473A	p.S1491S	TGACTCCGACTCC	.	53.0	14.0	17.0	0.0	.	24
SFPQ	6421	hgsc.bcm.edu;bcgsc.ca	37	1	35654866	35654867	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SFPQ	NM_005066	exon5	c.1533_1534insA	p.N511fs	TTTCATGTTTTTT	.	710.0	262.0	262.0	0.0	.	231
SH3YL1	26751	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	218860	218860	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SH3YL1	NM_015677	exon10	c.T980G	p.L327R	CCTCGAAGTTTTC	.	152.0	75.0	48.0	0.0	.	91
SHKBP1	92799	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	41089323	41089323	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SHKBP1	NM_138392	exon11	c.T980A	p.I327N	AGCCCATCACCAG	.	50.0	20.0	34.0	0.0	.	92
SLC1A7	6512	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	53555552	53555552	+	Silent	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SLC1A7	NM_006671	exon9	c.C1281G	p.L427L	GGTGACGAGGCCG	.	173.0	76.0	90.0	0.0	.	155
SLC22A8	9376	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	62761284	62761284	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SLC22A8	NM_001184732	exon9	c.G1283A	p.C428Y	AAGAGGCAGCTGA	.	145.0	68.0	89.0	0.0	.	93
SMEK1	55671	ucsc.edu;bcgsc.ca	37	14	91952073	91952073	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SMEK1	NM_032560	exon4	c.A200G	p.D67G	AGAGTGTCCTTTG	.	34.0	4.0	24.0	0.0	.	226
SNX13	23161	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	17908059	17908059	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SNX13	NM_015132	exon9	c.G808C	p.D270H	TATAATCAGGATC	.	347.0	110.0	124.0	0.0	.	650
SORCS3	22986	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	106976778	106976778	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SORCS3	NM_014978	exon19	c.G2632C	p.G878R	GAGGACGGCATCA	.	112.0	53.0	61.0	1.0	.	99
SPATA3	130560	hgsc.bcm.edu;bcgsc.ca	37	2	231861082	231861082	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_139073	exon1	c.C134G	p.T45R	AATCCACACCACA	.	111.0	9.0	65.0	0.0	.	.
SPATA3	130560	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	231861109	231861109	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_139073	exon1	c.C161G	p.T54R	AATCCACACCACA	.	114.0	39.0	70.0	0.0	.	.
SPATC1	375686	ucsc.edu;bcgsc.ca;mdanderson.org	37	8	145101782	145101782	+	Silent	SNP	C	C	T	rs140647326	byfrequency;alternate_allele	TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SPATC1	NM_198572	exon5	c.C1701T	p.L567L	CATGCTCGCCGAC	.	45.0	20.0	31.0	0.0	C|0.999;A|0.001	91
SPOCK1	6695	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	136314376	136314376	+	Silent	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SPOCK1	NM_004598	exon11	c.T1287C	p.D429D	TTTGTCATCATCC	.	303.0	130.0	123.0	0.0	.	91
SRCAP	10847	broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	30724539	30724539	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SRCAP	NM_006662	exon15	c.A2141G	p.K714R	GGACCAAGCCCAA	.	123.0	48.0	51.0	1.0	.	94
SRCAP	10847	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	30724538	30724538	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SRCAP	NM_006662	exon15	c.A2140T	p.K714X	TGGACCAAGCCCA	.	123.0	47.0	51.0	0.0	.	94
SSTR4	6754	broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	23017142	23017142	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SSTR4	NM_001052	exon1	c.A1022G	p.E341G	CTGAGGAGGAGCC	.	96.0	12.0	73.0	0.0	.	522
STK39	27347	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	169018309	169018309	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	STK39	NM_013233	exon5	c.G616T	p.V206L	TTTGTACTGAACC	.	348.0	126.0	195.0	0.0	.	546
STON2	85439	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	81862242	81862242	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	STON2	NM_001256430	exon4	c.G369C	p.E123D	ACCTGTCTCAGCT	.	118.0	50.0	51.0	0.0	.	95
STXBP1	6812	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	130442485	130442485	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	STXBP1	NM_001032221	exon17	c.C1511T	p.T504I	TCTCTACCCGTTC	.	47.0	36.0	35.0	0.0	.	91
SYT12	91683	hgsc.bcm.edu;bcgsc.ca	37	11	66807409	66807409	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SYT12	NM_001177880	exon4	c.A356C	p.E119A	GCCGGGAGTTGGA	.	72.0	24.0	47.0	0.0	.	91
SYT12	91683	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	66807406	66807406	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	SYT12	NM_001177880	exon4	c.353delG	p.R118fs	TGGGCCGGGAGTT	.	68.0	21.0	48.0	0.0	.	91
TBC1D26	353149	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	15642108	15642108	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	TBC1D26	NM_178571	exon8	c.A461G	p.Q154R	CCCTGCAGAAACA	.	215.0	111.0	189.0	0.0	.	90
TG	7038	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	133925494	133925494	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	TG	NM_003235	exon20	c.G4362C	p.Q1454H	CAGTCAGGACGGA	.	148.0	53.0	52.0	0.0	.	145
TMEM131	23505	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	98373568	98373568	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	TMEM131	NM_015348	exon41	c.G5646C	p.E1882D	TTAATTCTCGTGA	.	105.0	37.0	46.0	1.0	.	74
TMPO	7112	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	98938128	98938128	+	Splice_Site	SNP	G	G	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	TMPO	NM_001032283	exon5	c.783+1G>C	.	AAAAGGGTGATGC	.	140.0	51.0	65.0	0.0	.	93
TNFRSF21	27242	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	47252058	47252058	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	TNFRSF21	NM_014452	exon3	c.G859A	p.D287N	TCACGTCTTCCTT	.	418.0	170.0	191.0	1.0	.	227
TNIP3	79931	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	122085259	122085259	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	TNIP3	NM_001244764	exon4	c.A253G	p.T85A	TAGATGTGCCCTG	.	162.0	55.0	66.0	0.0	.	91
TNXB	7148	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	32035476	32035476	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	TNXB	NM_019105	exon18	c.G6506A	p.G2169E	CGCCGCCCCTCGT	.	157.0	73.0	74.0	1.0	.	90
TP53	7157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	7578211	7578211	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	TP53,NS,carcinoma,-1	TP53	NM_000546	exon6	c.G638A	p.R213Q	CTATGTCGAAAAG	.	90.0	57.0	76.0	0.0	.	70225
TRRAP	8295	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	98506458	98506458	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	TRRAP	NM_001244580	exon14	c.A1223G	p.D408G	TCGACGATGAGTC	.	132.0	38.0	45.0	0.0	.	923
UBR4	23352	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	19511591	19511591	+	Splice_Site	SNP	A	A	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	UBR4	NM_020765	exon16	c.1938+2T>C	.	ACTCTTACCAACT	.	97.0	45.0	63.0	1.0	.	612
USP47	55031	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	11964527	11964527	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	USP47	NM_017944	exon19	c.G2755T	p.D919Y	ACATGGGATACAG	.	152.0	62.0	88.0	0.0	.	660
VAV2	7410	ucsc.edu;bcgsc.ca	37	9	136650970	136650970	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	VAV2	NM_001134398	exon17	c.A1460G	p.K487R	CCCTGCTTTCCTT	.	49.0	4.0	45.0	0.0	.	1273
VIM	7431	hgsc.bcm.edu;broad.mit.edu	37	10	17277290	17277291	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	VIM	NM_003380	exon7	c.1131_1132insC	p.A377fs	AATGGCTCGTCAC	.	126.0	9.0	63.0	0.0	.	291
VPS33A	65082	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	122745969	122745969	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	VPS33A	NM_022916	exon4	c.G322C	p.D108H	GAAAATCTCTCGT	.	127.0	43.0	61.0	0.0	.	91
WDR49	151790	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	167246878	167246878	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	WDR49	NM_178824	exon10	c.G1312A	p.G438R	GATCTCCTGTGGT	.	273.0	93.0	140.0	0.0	.	155
XAB2	56949	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	19	7687527	7687527	+	Silent	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	XAB2	NM_020196	exon11	c.C1392T	p.A464A	CCGGCGGGCAGGC	.	17.0	8.0	16.0	0.0	.	272
ZCCHC2	54877	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	60241883	60241883	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZCCHC2	NM_017742	exon13	c.T2569G	p.F857V	GGTAGTTTCCCAG	.	260.0	88.0	127.0	1.0	.	432
ZCCHC4	29063	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	25353268	25353268	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZCCHC4	NM_024936	exon8	c.G968T	p.R323L	AATCCCGAATTTG	.	343.0	134.0	123.0	0.0	.	70
ZFX	7543	hgsc.bcm.edu;bcgsc.ca	37	X	24227055	24227104	+	Frame_Shift_Del	DEL	GCAAGTGCCCTCTTGCACATAGATGAGTCTGCTGGCCTCGGCAGACTGGC	GCAAGTGCCCTCTTGCACATAGATGAGTCTGCTGGCCTCGGCAGACTGGC	-	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	GCAAGTGCCCTCTTGCACATAGATGAGTCTGCTGGCCTCGGCAGACTGGC	GCAAGTGCCCTCTTGCACATAGATGAGTCTGCTGGCCTCGGCAGACTGGC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZFX	NM_003410	exon9	c.1132_1181del	p.378_394del	GGCACTGCAAGTG	.	65.0	18.0	107.0	0.0	.	132
ZNF208	7757	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	19	22156136	22156136	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZNF208	NM_007153	exon4	c.C1700A	p.T567N	CTAAGGGTTGAGG	.	56.0	20.0	22.0	0.0	.	7
ZNF2	7549	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	95847630	95847630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZNF2	NM_021088	exon5	c.G1057T	p.D353Y	TTCTTTGACCGCT	.	119.0	54.0	54.0	0.0	.	90
ZNF28	7576	hgsc.bcm.edu;bcgsc.ca	37	19	53303182	53303182	+	Missense_Mutation	SNP	T	T	C	rs75548544		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZNF28	NM_006969	exon4	c.A1916G	p.E639G	CCACACTCATTAC	.	249.0	11.0	99.0	0.0	.	91
ZNF436	80818	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	23689653	23689653	+	Silent	SNP	T	T	C	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZNF436	NM_001077195	exon4	c.A222G	p.Q74Q	CCCAAATTGTACA	.	279.0	121.0	120.0	0.0	.	153
ZNF536	9745	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	30936253	30936254	+	Frame_Shift_Ins	INS	-	-	AAGT	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZNF536	NM_014717	exon2	c.1784_1785insAAGT	p.P595fs	ACCTGCCAAGTAA	.	70.0	12.0	52.0	0.0	.	144
ZNF608	57507	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	123982848	123982848	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZNF608	NM_020747	exon4	c.T3229A	p.S1077T	AAAGTGACTGAGC	.	291.0	111.0	148.0	0.0	.	229
ZNF679	168417	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	63726562	63726562	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZNF679	NM_153363	exon5	c.T551G	p.F184C	AACATTTCAAATG	.	428.0	230.0	196.0	0.0	.	1
ZNF700	90592	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	19	12059506	12059506	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	ZNF700	NM_001271848	exon4	c.A676T	p.K226X	ACTTATAAATGTA	.	189.0	79.0	106.0	0.0	.	90
ZNF845	91664	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	53856410	53856410	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BC-A10U-01A-11D-A12Z-10	TCGA-BC-A10U-11A-11D-A16Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a85cabff-e8dc-440a-90f5-4fca51c33dd9	cc5b70cb-4799-4d23-86d6-30f9aec7989a	.	.	NM_138374	exon4	c.G2482A	p.E828K	AGTGGAGAGAAAC	.	197.0	96.0	109.0	0.0	.	.