Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
DNMT3A	0	genome.wustl.edu	36	2	25310747	25310747	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2974-03A-01D-0739-09	TCGA-AB-2974-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cd5c86f1-aa57-4266-b150-c64cbf496a27	d811ed5b-2b58-412c-aa34-2678349ba1f5	2	25310747	25310747	G	A	SNP	DNMT3A	NM_022552.3	human	genbank	54_36p	-1	reviewed	missense	c.2644	p.R882C	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_DNA_methylase,superfamily_FYVE/PHD zinc finger,PatternScan_C5_MTASE_1,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_Tudor/PWWP/MBT	-	no_errors	10	4	28.57	13	18	56.25	NA	NA	NA
NOX3	0	genome.wustl.edu	36	6	155816248	155816248	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2974-03A-01D-0739-09	TCGA-AB-2974-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cd5c86f1-aa57-4266-b150-c64cbf496a27	d811ed5b-2b58-412c-aa34-2678349ba1f5	6	155816248	155816248	C	T	SNP	NOX3	NM_015718.1	human	genbank	54_36p	-1	provisional	missense	c.322	p.G108R	1.000	HMMPfam_Ferric_reduct	HMMPfam_FAD_binding_8,HMMPfam_NAD_binding_6,HMMPfam_Ferric_reduct,superfamily_Riboflavin_synthase_like_b-brl,superfamily_SSF52343	-	no_errors	469	85	15.21	1019	886	46.48	NA	NA	NA
GRM8	0	genome.wustl.edu	36	7	125960615	125960615	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2974-03A-01D-0739-09	TCGA-AB-2974-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cd5c86f1-aa57-4266-b150-c64cbf496a27	d811ed5b-2b58-412c-aa34-2678349ba1f5	7	125960615	125960615	G	A	SNP	GRM8	NM_000845.2	human	genbank	54_36p	-1	reviewed	missense	c.2057	p.A686V	1.000	HMMPfam_7tm_3	HMMPfam_ANF_receptor,HMMPfam_NCD3G,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,superfamily_Periplasmic binding protein-like I	-	no_errors	744	79	9.59	947	597	38.62	NA	NA	NA
PKD2L1	0	genome.wustl.edu	36	10	102044717	102044717	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2974-03A-01D-0739-09	TCGA-AB-2974-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cd5c86f1-aa57-4266-b150-c64cbf496a27	d811ed5b-2b58-412c-aa34-2678349ba1f5	10	102044717	102044717	C	T	SNP	PKD2L1	NM_016112.2	human	genbank	54_36p	-1	reviewed	missense	c.1510	p.E504K	1.000	HMMPfam_PKD_channel,superfamily_Voltage-gated potassium channels	HMMPfam_PKD_channel,superfamily_Voltage-gated potassium channels	-	no_errors	770	102	11.64	369	278	42.84	NA	NA	NA
FLT3	0	genome.wustl.edu	36	13	27490642	27490642	+	Missense_Mutation	SNP	C	C	A	rs121913488		TCGA-AB-2974-03A-01D-0739-09	TCGA-AB-2974-11A-01D-0739-09	C	C	C	A	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cd5c86f1-aa57-4266-b150-c64cbf496a27	d811ed5b-2b58-412c-aa34-2678349ba1f5	13	27490642	27490642	C	A	SNP	FLT3	NM_004119.2	human	genbank	54_36p	-1	reviewed	missense	c.2503	p.D835Y	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726	-	no_errors	910	135	12.92	667	573	46.14	NA	NA	NA
FAM27L	0	genome.wustl.edu	36	17	21750328	21750328	+	Silent	SNP	C	C	T			TCGA-AB-2974-03A-01D-0739-09	TCGA-AB-2974-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cd5c86f1-aa57-4266-b150-c64cbf496a27	d811ed5b-2b58-412c-aa34-2678349ba1f5	17	21750328	21750328	C	T	SNP	FAM27L	NM_203392.2	human	genbank	54_36p	+1	predicted	silent	c.180	p.H60	0.000	NULL	NULL	-	no_errors	276	39	12.34	196	155	44.16	NA	NA	NA
PSG3	0	genome.wustl.edu	36	19	47928897	47928897	+	Silent	SNP	G	G	A			TCGA-AB-2974-03A-01D-0739-09	TCGA-AB-2974-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cd5c86f1-aa57-4266-b150-c64cbf496a27	d811ed5b-2b58-412c-aa34-2678349ba1f5	19	47928897	47928897	G	A	SNP	PSG3	NM_021016.3	human	genbank	54_36p	-1	validated	silent	c.588	p.S196	0.001	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_V-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors	723	102	12.35	957	854	47.13	NA	NA	NA
MYO18B	0	genome.wustl.edu	36	22	24549599	24549599	+	Silent	SNP	G	G	A			TCGA-AB-2974-03A-01D-0739-09	TCGA-AB-2974-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cd5c86f1-aa57-4266-b150-c64cbf496a27	d811ed5b-2b58-412c-aa34-2678349ba1f5	22	24549599	24549599	G	A	SNP	MYO18B	NM_032608.5	human	genbank	54_36p	+1	reviewed	silent	c.2649	p.T883	0.000	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_IQ,HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	768	80	9.40	318	309	49.13	NA	NA	NA
NPM1	0	genome.wustl.edu	36	5	170770152	170770153	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-2974-03A-01D-0739-09	TCGA-AB-2974-11A-01D-0739-09	-	-	-	TCTG	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cd5c86f1-aa57-4266-b150-c64cbf496a27	d811ed5b-2b58-412c-aa34-2678349ba1f5	5	170770152	170770153	-	TCTG	INS	NPM1	NM_002520.1	human	genbank	54_36p	+1	validated	frame_shift_ins	c.863_864	p.W288fs	1.000:1.000	NULL	HMMPfam_Nucleoplasmin,superfamily_Nucleoplasmin-like core domain	-	no_errors	NA	NA	NA	NA	NA	NA	NA	NA	NA