Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
KANSL1L	0	genome.wustl.edu	36	2	210648701	210648701	+	Silent	SNP	C	C	G			TCGA-AB-2894-03A-01W-0733-08	TCGA-AB-2894-11A-01W-0732-08	C	C	C	G	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	ac7f533d-3f28-49c8-9548-fd7d3d86a42a	243cf7ad-c094-494c-9fee-0523176d3079	2	210648701	210648701	C	G	SNP	C2orf67	NM_152519.2	human	genbank	54_36p	-1	validated	silent	c.1575	p.L525	0.998	NULL	NULL	-	no_errors	217	8	3.56	67	34	33.66	4	11	73.33
PCDHA6	0	genome.wustl.edu	36	5	140188859	140188859	+	Silent	SNP	T	T	C			TCGA-AB-2894-03A-01W-0733-08	TCGA-AB-2894-11A-01W-0732-08	T	T	T	C	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	ac7f533d-3f28-49c8-9548-fd7d3d86a42a	243cf7ad-c094-494c-9fee-0523176d3079	5	140188859	140188859	T	C	SNP	PCDHA6	NM_018909.2	human	genbank	54_36p	+1	reviewed	silent	c.999	p.H333	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors	36	1	2.70	11	10	47.62	NA	NA	NA
CRISPLD1	0	genome.wustl.edu	36	8	76091409	76091409	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2894-03A-01W-0733-08	TCGA-AB-2894-11A-01W-0732-08	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	ac7f533d-3f28-49c8-9548-fd7d3d86a42a	243cf7ad-c094-494c-9fee-0523176d3079	8	76091409	76091409	G	A	SNP	CRISPLD1	NM_031461.4	human	genbank	54_36p	+1	validated	missense	c.782	p.R261Q	0.995	NULL	HMMSmart_SM00198,HMMPfam_LCCL,HMMSmart_SM00603,superfamily_LCCL domain,HMMPfam_SCP,superfamily_PR-1-like,PatternScan_CRISP_2	-	no_errors	81	6	6.90	33	12	26.09	9	4	30.77
PLEC	0	genome.wustl.edu	36	8	145062821	145062821	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2894-03A-01W-0733-08	TCGA-AB-2894-11A-01W-0732-08	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	ac7f533d-3f28-49c8-9548-fd7d3d86a42a	243cf7ad-c094-494c-9fee-0523176d3079	8	145062821	145062821	G	A	SNP	PLEC1	NM_201380.2	human	genbank	54_36p	-1	reviewed	missense	c.13567	p.R4523C	1.000	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat	HMMPfam_Plectin,HMMSmart_SM00250,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_S10_plectin,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_Plakin repeat	-	no_errors	9	1	10.00	3	5	62.50	46	37	44.58
ADAMTS1	0	genome.wustl.edu	36	21	27136618	27136618	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2894-03A-01W-0733-08	TCGA-AB-2894-11A-01W-0732-08	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	ac7f533d-3f28-49c8-9548-fd7d3d86a42a	243cf7ad-c094-494c-9fee-0523176d3079	21	27136618	27136618	G	A	SNP	ADAMTS1	NM_006988.3	human	genbank	54_36p	-1	reviewed	missense	c.988	p.R330W	0.998	HMMPfam_Reprolysin,superfamily_SSF55486	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,PatternScan_ZINC_PROTEASE,HMMSmart_ACR,HMMPfam_ADAM_spacer1,PatternScan_DISINTEGRIN_1,superfamily_SSF55486	-	no_errors	212	9	4.07	63	32	33.68	NA	NA	NA