Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
TET2	0	genome.wustl.edu	36	4	106384227	106384227	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AB-2879-03A-01W-0732-08	TCGA-AB-2879-11A-01W-0732-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f8e05d5a-f2b4-4023-b0d5-548df03a1921	d48634c4-b8d4-4fe7-b5a1-428c3682337f	4	106384227	106384227	C	T	SNP	TET2	ENST00000265149	human	ensembl	54_36p	+1	known	nonsense	c.52	p.R18*	1.000	NULL	NULL	-	no_start_codon	130	19	12.58	96	86	46.74	24	24	50.00
TRPM3	0	genome.wustl.edu	36	9	72408131	72408131	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2879-03A-01W-0732-08	TCGA-AB-2879-11A-01W-0732-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f8e05d5a-f2b4-4023-b0d5-548df03a1921	d48634c4-b8d4-4fe7-b5a1-428c3682337f	9	72408131	72408131	C	T	SNP	TRPM3	NM_001007471.1	human	genbank	54_36p	-1	reviewed	missense	c.2707	p.E903K	1.000	NULL	HMMPfam_Ion_trans	-	no_errors	228	23	9.09	219	162	41.86	NA	NA	NA
TET2	0	genome.wustl.edu	36	4	106375370	106375370	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AB-2879-03A-01W-0732-08	TCGA-AB-2879-11A-01W-0732-08	C	C	C	-	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f8e05d5a-f2b4-4023-b0d5-548df03a1921	d48634c4-b8d4-4fe7-b5a1-428c3682337f	4	106375370	106375370	C	-	DEL	TET2	NM_017628.1	human	genbank	54_36p	+1	validated	frame_shift_del	c.822	p.N275fs	0.379	NULL	NULL	-	no_errors	217	40	15.09	167	113	38.05	27	30	49.18
NPM1	0	genome.wustl.edu	36	5	170770152	170770153	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-2879-03A-01W-0732-08	TCGA-AB-2879-11A-01W-0732-08	-	-	-	TCTG	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f8e05d5a-f2b4-4023-b0d5-548df03a1921	d48634c4-b8d4-4fe7-b5a1-428c3682337f	5	170770152	170770153	-	TCTG	INS	NPM1	NM_002520.1	human	genbank	54_36p	+1	validated	frame_shift_ins	c.863_864	p.W288fs	1.000:1.000	NULL	HMMPfam_Nucleoplasmin,superfamily_Nucleoplasmin-like core domain	-	no_errors	NA	NA	NA	NA	NA	NA	NA	NA	NA
FLT3	0	genome.wustl.edu	36	13	27506250	27506251	+	In_Frame_Ins	INS	-	-	TTGAGATCATATTCATATTCTCTGAAATCAACG			TCGA-AB-2879-03A-01W-0732-08	TCGA-AB-2879-11A-01W-0732-08	-	-	-	TTGAGATCATATTCATATTCTCTGAAATCAACG	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f8e05d5a-f2b4-4023-b0d5-548df03a1921	d48634c4-b8d4-4fe7-b5a1-428c3682337f	13	27506250	27506251	-	TTGAGATCATATTCATATTCTCTGAAATCAACG	INS	FLT3	NM_004119.2	human	genbank	54_36p	-1	reviewed	in_frame_ins	c.1806_1805	p.602in_frame_insNVDFREYEYDL	0.998:1.000	superfamily_Kinase_like	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726	-	no_errors	NA	NA	NA	NA	NA	NA	NA	NA	NA