Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
OBSCN	0	genome.wustl.edu	36	1	226540582	226540582	+	Missense_Mutation	SNP	T	T	G			TCGA-AB-2829-03B-01W-0728-08	TCGA-AB-2829-11B-01W-0728-08	T	T	T	G	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	3628d9c6-ef9a-480a-97b2-3f2185457880	bba8ed8c-637e-445e-90eb-b288db2e63bb	1	226540582	226540582	T	G	SNP	OBSCN	NM_001098623.1	human	genbank	54_36p	+1	reviewed	missense	c.9185	p.V3062G	0.742	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00220,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,PatternScan_PROTEIN_KINASE_ST,superfamily_Fibronectin type III,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors	8	0	0.00	21	17	44.74	NA	NA	NA
ITPR1	0	genome.wustl.edu	36	3	4800546	4800546	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2829-03B-01W-0728-08	TCGA-AB-2829-11B-01W-0728-08	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	3628d9c6-ef9a-480a-97b2-3f2185457880	bba8ed8c-637e-445e-90eb-b288db2e63bb	3	4800546	4800546	G	A	SNP	ITPR1	NM_001099952.1	human	genbank	54_36p	+1	validated	missense	c.6413	p.G2138D	0.977	NULL	HMMPfam_RYDR_ITPR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_Ion_trans,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,superfamily_IP3 receptor type 1 binding core domain 2	-	no_errors	98	1	1.01	139	99	41.25	NA	NA	NA
CNOT6	0	genome.wustl.edu	36	5	179927586	179927586	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-2829-03B-01W-0728-08	TCGA-AB-2829-11B-01W-0728-08	G	G	G	T	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	3628d9c6-ef9a-480a-97b2-3f2185457880	bba8ed8c-637e-445e-90eb-b288db2e63bb	5	179927586	179927586	G	T	SNP	CNOT6	NM_015455.3	human	genbank	54_36p	+1	reviewed	missense	c.1004	p.R335L	1.000	HMMPfam_Exo_endo_phos,superfamily_DNase I-like	HMMPfam_LRR_1,HMMSmart_SM00369,HMMPfam_Exo_endo_phos,superfamily_DNase I-like,superfamily_L domain-like	-	no_errors	60	0	0.00	63	56	47.06	NA	NA	NA
SLC43A1	0	genome.wustl.edu	36	11	57009230	57009230	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2829-03B-01W-0728-08	TCGA-AB-2829-11B-01W-0728-08	T	T	T	C	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	3628d9c6-ef9a-480a-97b2-3f2185457880	bba8ed8c-637e-445e-90eb-b288db2e63bb	11	57009230	57009230	T	C	SNP	SLC43A1	NM_003627.4	human	genbank	54_36p	-1	provisional	missense	c.1595	p.Y532C	0.999	superfamily_MFS general substrate transporter	superfamily_MFS general substrate transporter	-	no_errors	33	0	0.00	30	26	46.43	NA	NA	NA
PIWIL4	0	genome.wustl.edu	36	11	93940384	93940384	+	Missense_Mutation	SNP	G	G	C			TCGA-AB-2829-03B-01W-0728-08	TCGA-AB-2829-11B-01W-0728-08	G	G	G	C	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	3628d9c6-ef9a-480a-97b2-3f2185457880	bba8ed8c-637e-445e-90eb-b288db2e63bb	11	93940384	93940384	G	C	SNP	PIWIL4	NM_152431.2	human	genbank	54_36p	+1	validated	missense	c.52	p.A18P	0.000	NULL	HMMPfam_PAZ,HMMPfam_Piwi,superfamily_Ribonuclease H-like,superfamily_PAZ domain	-	no_errors	22	0	0.00	75	44	36.67	NA	NA	NA
RPL4	0	genome.wustl.edu	36	15	64581298	64581298	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2829-03B-01W-0728-08	TCGA-AB-2829-11B-01W-0728-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	3628d9c6-ef9a-480a-97b2-3f2185457880	bba8ed8c-637e-445e-90eb-b288db2e63bb	15	64581298	64581298	C	T	SNP	RPL4	NM_000968.2	human	genbank	54_36p	-1	reviewed	missense	c.428	p.R143H	1.000	HMMPfam_Ribosomal_L4,superfamily_Ribosomal protein L4	HMMPfam_Ribosomal_L4,superfamily_Ribosomal protein L4,PatternScan_RIBOSOMAL_L1E,PatternScan_ALDEHYDE_DEHYDR_GLU	-	no_errors	28	0	0.00	126	60	32.09	NA	NA	NA
NTRK3	0	genome.wustl.edu	36	15	86471424	86471424	+	Silent	SNP	G	G	A			TCGA-AB-2829-03B-01W-0728-08	TCGA-AB-2829-11B-01W-0728-08	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	3628d9c6-ef9a-480a-97b2-3f2185457880	bba8ed8c-637e-445e-90eb-b288db2e63bb	15	86471424	86471424	G	A	SNP	NTRK3	NM_001012338.1	human	genbank	54_36p	-1	reviewed	silent	c.1266	p.T422	1.000	NULL	HMMPfam_LRRNT,HMMSmart_SM00013,HMMSmart_SM00082,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMPfam_LRR_1,PatternScan_RECEPTOR_TYR_KIN_II,HMMSmart_SM00220,HMMSmart_SM00409,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors	141	0	0.00	221	67	23.18	NA	NA	NA
TP53	0	genome.wustl.edu	36	17	7517825	7517825	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2829-03B-01W-0728-08	TCGA-AB-2829-11B-01W-0728-08	T	T	T	C	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	3628d9c6-ef9a-480a-97b2-3f2185457880	bba8ed8c-637e-445e-90eb-b288db2e63bb	17	7517825	7517825	T	C	SNP	TP53	NM_000546.4	human	genbank	54_36p	-1	reviewed	missense	c.838	p.R280G	0.997	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors	182	1	0.54	189	95	33.10	NA	NA	NA
TP53	0	genome.wustl.edu	36	17	7518334	7518334	+	Splice_Site	SNP	C	C	T			TCGA-AB-2829-03B-01W-0728-08	TCGA-AB-2829-11B-01W-0728-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	3628d9c6-ef9a-480a-97b2-3f2185457880	bba8ed8c-637e-445e-90eb-b288db2e63bb	17	7518334	7518334	C	T	SNP	TP53	NM_000546.4	human	genbank	54_36p	-1	reviewed	splice_site	c.673-1	e6-1	0.990	-	-	-	no_errors	258	2	0.77	233	124	34.44	NA	NA	NA
HSPA13	0	genome.wustl.edu	36	21	14667840	14667840	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2829-03B-01W-0728-08	TCGA-AB-2829-11B-01W-0728-08	T	T	T	C	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	3628d9c6-ef9a-480a-97b2-3f2185457880	bba8ed8c-637e-445e-90eb-b288db2e63bb	21	14667840	14667840	T	C	SNP	HSPA13	NM_006948.4	human	genbank	54_36p	-1	reviewed	missense	c.1385	p.N462S	1.000	NULL	HMMPfam_HSP70,PatternScan_HSP70_1,PatternScan_HSP70_2,PatternScan_HSP70_3,superfamily_Actin-like ATPase domain	-	no_errors	47	0	0.00	216	31	12.45	NA	NA	NA