Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq TVarRat NVarRat dbSNP_Strength dbSNP_AF dbSNP_PopFreq Confidence Algorithm PABPC4 8761 hgsc.bcm.edu hg19 1 40031014 40031014 + Missense_Mutation SNP A A C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PABPC4 NM_001135653 exon8 c.T1009G p.F337V AGACGAAGCCAAA . 59.0 19.0 55.0 0.0 . 56 . . . none . . PASS Atlas-SNP SLC6A9 6536 hgsc.bcm.edu hg19 1 44475672 44475672 + Missense_Mutation SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . SLC6A9 NM_201649 exon4 c.G503A p.C168Y CCCAGGCACCCCT . 212.0 54.0 193.0 0.0 . 109 . . . none . . PASS Atlas-SNP CYP4A11 1579 hgsc.bcm.edu hg19 1 47403742 47403742 + Missense_Mutation SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . CYP4A11 NM_000778 exon2 c.A263G p.H88R AGCCAATGAGGAC . 122.0 40.0 132.0 0.0 . 77 . . . none . . PASS Atlas-SNP MYSM1 114803 hgsc.bcm.edu hg19 1 59127169 59127169 + Missense_Mutation SNP A A G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . MYSM1 NM_001085487 exon18 c.T2179C p.F727L CTTCAAATTTGTA . 58.0 15.0 67.0 0.0 . 50 . . . none . . PASS Atlas-SNP CCDC18 343099 hgsc.bcm.edu hg19 1 93671122 93671122 + Missense_Mutation SNP A A G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . CCDC18 NM_206886 exon8 c.A851G p.N284S AAGAAAATAAAAG . 334.0 95.0 351.0 0.0 . 93 . . . none . . PASS Atlas-SNP OLFML2B 25903 hgsc.bcm.edu hg19 1 161989728 161989728 + Missense_Mutation SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . OLFML2B NM_015441 exon2 c.C419A p.A140E CTGTCTGCCTCCC . 64.0 13.0 68.0 0.0 . 114 . . . none . . PASS Atlas-SNP DYRK3 8444 hgsc.bcm.edu hg19 1 206821237 206821237 + Silent SNP C C A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d DYRK3_ENST00000367109,NS,carcinoma,0,3 DYRK3 NM_003582 exon3 c.C694A p.R232R AAACTTCGACAGT . 152.0 42.0 138.0 0.0 . 146 . . . none . . PASS Atlas-SNP IHH 3549 hgsc.bcm.edu hg19 2 219920563 219920563 + Missense_Mutation SNP C C A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . IHH NM_002181 exon3 c.G602T p.G201V CAGCCGCCCGTCT . 37.0 13.0 44.0 0.0 . 33 . . . none . . PASS Atlas-SNP ATG4B 23192 hgsc.bcm.edu hg19 2 242611647 242611647 + Nonsense_Mutation SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . ATG4B NM_013325 exon13 c.G1150T p.E384X GACTCAGAAGATG . 89.0 20.0 73.0 0.0 . 35 . . . none . . PASS Atlas-SNP FBLN2 2199 hgsc.bcm.edu hg19 3 13672240 13672240 + Missense_Mutation SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . FBLN2 NM_001004019 exon15 c.G3010A p.A1004T GAGTGTGCCAACA . 109.0 25.0 111.0 0.0 . 137 . . . none . . PASS Atlas-SNP CMC1 152100 hgsc.bcm.edu hg19 3 28361046 28361046 + Missense_Mutation SNP A A G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . CMC1 NM_182523 exon4 c.A247G p.K83E TACCTGAAGGAAA . 356.0 106.0 405.0 0.0 . 9 . . . none . . PASS Atlas-SNP C3orf67 200844 hgsc.bcm.edu hg19 3 58817468 58817468 + Missense_Mutation SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . C3orf67 NM_198463 exon13 c.G1366A p.V456I TGCTGACATTACA . 147.0 43.0 151.0 0.0 . 45 . . . none . . PASS Atlas-SNP CASR 846 hgsc.bcm.edu hg19 3 121976017 121976017 + Missense_Mutation SNP C C A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d CASR,colon,carcinoma,0,2 CASR NM_001178065 exon3 c.C275A p.T92K ACTTGACGCTGGG . 134.0 48.0 146.0 0.0 . 190 . . . none . . PASS Atlas-SNP MAGEF1 64110 hgsc.bcm.edu hg19 3 184428718 184428718 + Missense_Mutation SNP C C A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . MAGEF1 NM_022149 exon1 c.G892T p.A298S CACTGGCCCTGGC . 72.0 23.0 65.0 0.0 . 27 . . . none . . PASS Atlas-SNP DGKQ 1609 hgsc.bcm.edu hg19 4 960305 960305 + Silent SNP C C T rs373354724 TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . DGKQ NM_001347 exon12 c.G1377A p.T459T CAGCATCGTCCGC . 103.0 23.0 95.0 0.0 . 29 . . . weak . . PASS Atlas-SNP HGFAC 3083 hgsc.bcm.edu hg19 4 3443797 3443797 + Silent SNP C C G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d HGFAC,NS,carcinoma,0,2 HGFAC NM_001528 exon1 c.C69G p.L23L CCTCCTCCTGCTG . 52.0 6.0 57.0 0.0 . 69 . . . none . . PASS Atlas-SNP SORCS2 57537 hgsc.bcm.edu hg19 4 7691237 7691237 + Missense_Mutation SNP C C G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . SORCS2 NM_020777 exon11 c.C1513G p.L505V CTGCACCTGCGCT . 26.0 11.0 33.0 0.0 . 98 . . . none . . PASS Atlas-SNP BOD1L1 259282 hgsc.bcm.edu hg19 4 13603230 13603230 + Missense_Mutation SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . . NM_148894 exon10 c.A5294G p.N1765S GCATCATTATCTC . 61.0 17.0 77.0 0.0 . . . . . none . . PASS Atlas-SNP STAP1 26228 hgsc.bcm.edu hg19 4 68442967 68442967 + Missense_Mutation SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . STAP1 NM_012108 exon4 c.C353T p.T118I TTCTTACAGTAAC . 355.0 74.0 261.0 0.0 . 46 . . . none . . PASS Atlas-SNP YTHDC1 91746 hgsc.bcm.edu hg19 4 69203170 69203170 + Splice_Site SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . YTHDC1 NM_133370 exon5 c.460-2A>G . ATTCTCTGATGTT . 96.0 24.0 66.0 0.0 . 81 . . . none . . PASS Atlas-SNP FSTL5 56884 hgsc.bcm.edu hg19 4 162307261 162307261 + Missense_Mutation SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . FSTL5 NM_020116 exon16 c.C2182A p.Q728K CCTCCTGTATTTC . 109.0 49.0 92.0 0.0 . 207 . . . none . . PASS Atlas-SNP MAP3K1 4214 hgsc.bcm.edu hg19 5 56161247 56161247 + Missense_Mutation SNP C C G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . MAP3K1 NM_005921 exon5 c.C1116G p.D372E TTCAGACCCAATG . 132.0 29.0 145.0 0.0 . 355 . . . none . . PASS Atlas-SNP MAP3K1 4214 hgsc.bcm.edu hg19 5 56161266 56161266 + Missense_Mutation SNP A A C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . MAP3K1 NM_005921 exon5 c.A1135C p.T379P AGAAAAACTTTAA . 117.0 28.0 140.0 0.0 . 355 . . . none . . PASS Atlas-SNP ERAP1 51752 hgsc.bcm.edu hg19 5 96130824 96130824 + Missense_Mutation SNP A A T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . ERAP1 NM_001198541 exon5 c.T840A p.D280E TGCATAATCTGCT . 64.0 18.0 91.0 0.0 . 59 . . . none . . PASS Atlas-SNP PCDHB8 56128 hgsc.bcm.edu hg19 5 140559171 140559171 + Missense_Mutation SNP C C G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PCDHB8 NM_019120 exon1 c.C1556G p.S519W TCAGGTCGCTGGA . 381.0 50.0 311.0 0.0 . 199 . . . none . . PASS Atlas-SNP PCDHGA3 56112 hgsc.bcm.edu hg19 5 140725344 140725344 + Missense_Mutation SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PCDHGA3 NM_032011 exon1 c.G1744A p.A582T CGCTCCGCAGAGC . 112.0 29.0 121.0 0.0 . 246 . . . none . . PASS Atlas-SNP MXD3 83463 hgsc.bcm.edu hg19 5 176734952 176734952 + Missense_Mutation SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . MXD3 NM_001142935 exon5 c.A335G p.Q112R TGCTCCTGATCCT . 78.0 26.0 77.0 0.0 . 13 . . . none . . PASS Atlas-SNP BRD2 6046 hgsc.bcm.edu hg19 6 32942389 32942389 + Missense_Mutation SNP C C A rs56109539 alternate_allele TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . BRD2 NM_005104 exon3 c.C180A p.N60K TGCCAACCCACCA . 132.0 38.0 112.0 0.0 . 70 . . . alt . . PASS Atlas-SNP AARS2 57505 hgsc.bcm.edu hg19 6 44279883 44279883 + Missense_Mutation SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d AARS2,NS,carcinoma,0,1 AARS2 NM_020745 exon2 c.G361A p.V121M GACCCACATCTTC . 108.0 33.0 102.0 0.0 . 77 . . . none . . PASS Atlas-SNP CDK19 23097 hgsc.bcm.edu hg19 6 110943359 110943359 + Missense_Mutation SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d CDK19,NS,carcinoma,0,1 CDK19 NM_015076 exon11 c.G1042A p.G348S GGCAGCCGGCAAA . 76.0 22.0 93.0 0.0 . 51 . . . none . . PASS Atlas-SNP UPP1 7378 hgsc.bcm.edu hg19 7 48146603 48146603 + Silent SNP G G C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . UPP1 NM_003364 exon7 c.G570C p.L190L GGAGCTGTTGCTG . 87.0 23.0 50.0 0.0 . 35 . . . none . . PASS Atlas-SNP C7orf72 100130988 hgsc.bcm.edu hg19 7 50175730 50175730 + Missense_Mutation SNP T T G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . C7orf72 NM_001161834 exon5 c.T904G p.S302A ACAAGATCTTTCT . 128.0 21.0 104.0 0.0 . 26 . . . none . . PASS Atlas-SNP UPK3B 80761 hgsc.bcm.edu hg19 7 76140096 76140096 + Missense_Mutation SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . UPK3B NM_030570 exon1 c.G127T p.G43W ACCCAAGGGGCTG . 174.0 51.0 152.0 0.0 . 15 . . . none . . PASS Atlas-SNP CSMD1 64478 hgsc.bcm.edu hg19 8 3046428 3046428 + Missense_Mutation SNP G G A rs374772217 alternate_allele TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d CSMD1_ENST00000537824,NS,carcinoma,0,2 CSMD1 NM_033225 exon35 c.C5504T p.T1835M CCCTCCGTAACTA . 134.0 9.0 129.0 1.0 . 1469 . . . alt . . PASS Atlas-SNP BHLHE22 27319 hgsc.bcm.edu hg19 8 65494023 65494023 + Missense_Mutation SNP A A G rs62519837 bycluster TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d BHLHE22,extremity,malignant_melanoma,0,1 BHLHE22 NM_152414 exon1 c.A676G p.S226G GGCGGCAGCAGCA . 26.0 5.0 24.0 1.0 . 21 . . . weak G|1.000;|0.000 1.000 PASS Atlas-SNP RECK 8434 hgsc.bcm.edu hg19 9 36058855 36058855 + Missense_Mutation SNP A A T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . RECK NM_021111 exon3 c.A191T p.K64I GACTAAAACATCT . 51.0 15.0 69.0 0.0 . 73 . . . none . . PASS Atlas-SNP DOLK 22845 hgsc.bcm.edu hg19 9 131709023 131709023 + Missense_Mutation SNP C C T rs377658203 alternate_allele TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d DOLK,caecum,carcinoma,0,1 DOLK NM_014908 exon1 c.G560A p.R187H AAGCAGCGGGGCA . 40.0 9.0 51.0 0.0 . 39 . . . alt . . PASS Atlas-SNP GTF3C4 9329 hgsc.bcm.edu hg19 9 135546223 135546223 + Missense_Mutation SNP G G C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . GTF3C4 NM_012204 exon1 c.G238C p.V80L GTGTCTGTGTCCA . 74.0 18.0 62.0 0.0 . 53 . . . none . . PASS Atlas-SNP ANXA7 310 hgsc.bcm.edu hg19 10 75147485 75147485 + Missense_Mutation SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . ANXA7 NM_004034 exon8 c.C661A p.Q221K TTTTTTGCCTCTG . 89.0 26.0 87.0 0.0 . 50 . . . none . . PASS Atlas-SNP HSPA12A 259217 hgsc.bcm.edu hg19 10 118434763 118434763 + Silent SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . HSPA12A NM_025015 exon12 c.C1557T p.V519V AAAGAGGACGGCA . 155.0 48.0 131.0 0.0 . 81 . . . none . . PASS Atlas-SNP TRPM5 29850 hgsc.bcm.edu hg19 11 2427988 2427988 + Missense_Mutation SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . TRPM5 NM_014555 exon21 c.G3154A p.V1052I AGGTGACGACCTT . 80.0 9.0 67.0 0.0 . 86 . . . none . . PASS Atlas-SNP SMPD1 6609 hgsc.bcm.edu hg19 11 6411941 6411941 + Missense_Mutation SNP C C T rs78250081 bycluster TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . SMPD1 NM_000543 exon1 c.C113T p.A38V TGCTGGCGCTGGC . 101.0 9.0 69.0 0.0 . 108 . . . weak . . PASS Atlas-SNP KIF5A 3798 hgsc.bcm.edu hg19 12 57968953 57968953 + Silent SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . KIF5A NM_004984 exon16 c.G1803T p.V601V GTCTGTGGTCAAG . 153.0 36.0 101.0 0.0 . 143 . . . none . . PASS Atlas-SNP DDX54 79039 hgsc.bcm.edu hg19 12 113602055 113602055 + Silent SNP C C G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . DDX54 NM_024072 exon15 c.G1755C p.L585L GCTGCACAGGTCT . 54.0 21.0 47.0 0.0 . 73 . . . none . . PASS Atlas-SNP CCDC64 92558 hgsc.bcm.edu hg19 12 120530940 120530940 + Missense_Mutation SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . CCDC64 NM_207311 exon9 c.T1697C p.L566P AACGACTCTTCTC . 106.0 19.0 94.0 0.0 . 40 . . . none . . PASS Atlas-SNP EP400 57634 hgsc.bcm.edu hg19 12 132547068 132547068 + Missense_Mutation SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d EP400,NS,carcinoma,0,2 EP400 NM_015409 exon47 c.G8156A p.R2719K TTCTCAGGCAGCA . 100.0 4.0 77.0 0.0 . 370 . . . none . . PASS Atlas-SNP FRY 10129 hgsc.bcm.edu hg19 13 32813948 32813948 + Missense_Mutation SNP A A G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . FRY NM_023037 exon46 c.A6617G p.N2206S GGGTCAATGTGGT . 96.0 24.0 128.0 0.0 . 312 . . . none . . PASS Atlas-SNP UGGT2 55757 hgsc.bcm.edu hg19 13 96508522 96508522 + Missense_Mutation SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . UGGT2 NM_020121 exon34 c.C3898A p.L1300I GACGAAGCCAACG . 195.0 61.0 208.0 0.0 . 127 . . . none . . PASS Atlas-SNP CHD8 57680 hgsc.bcm.edu hg19 14 21875030 21875030 + Silent SNP G G C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . CHD8 NM_001170629 exon13 c.C2892G p.L964L GTGCTTGAGACTA . 86.0 29.0 82.0 0.0 . 339 . . . none . . PASS Atlas-SNP SLC8A3 6547 hgsc.bcm.edu hg19 14 70634950 70634950 + Missense_Mutation SNP A A T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . SLC8A3 NM_183002 exon2 c.T190A p.Y64N CCGGGTACCAGAT . 143.0 39.0 123.0 0.0 . 234 . . . none . . PASS Atlas-SNP TECPR2 9895 hgsc.bcm.edu hg19 14 102880977 102880977 + Missense_Mutation SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . TECPR2 NM_001172631 exon5 c.T485C p.L162P AGGGGCTCTGTAA . 84.0 17.0 82.0 0.0 . 114 . . . none . . PASS Atlas-SNP C15orf39 56905 hgsc.bcm.edu hg19 15 75498964 75498964 + Missense_Mutation SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d .,1 C15orf39 NM_015492 exon2 c.G575A p.R192Q TCTTGCGGGGGGT . 41.0 7.0 58.0 1.0 . 64 . . . none . . PASS Atlas-SNP CASKIN1 57524 hgsc.bcm.edu hg19 16 2228947 2228947 + Silent SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . CASKIN1 NM_020764 exon19 c.G4155A p.Q1385Q CACCGCCTGCAGC . 5.0 4.0 1.0 0.0 . 130 . . . none . . PASS Atlas-SNP SRRM2 23524 hgsc.bcm.edu hg19 16 2815043 2815043 + Missense_Mutation SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d SRRM2,colon,carcinoma,0,1 SRRM2 NM_016333 exon11 c.T4514C p.L1505P CAGAGCTCAACAA . 84.0 26.0 72.0 0.0 . 263 . . . none . . PASS Atlas-SNP CLDN6 9074 hgsc.bcm.edu hg19 16 3065429 3065429 + Silent SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . CLDN6 NM_021195 exon2 c.C594T p.A198A GTAGCGGGCCATG . 117.0 28.0 93.0 0.0 . 31 . . . none . . PASS Atlas-SNP UQCRC2 7385 hgsc.bcm.edu hg19 16 21974187 21974187 + Silent SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . UQCRC2 NM_003366 exon6 c.C495T p.A165A TGTGGCCTTTCAG . 97.0 48.0 80.0 0.0 . 46 . . . none . . PASS Atlas-SNP ERN2 10595 hgsc.bcm.edu hg19 16 23711991 23711991 + Missense_Mutation SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . ERN2 NM_033266 exon13 c.C1538T p.T513I AGGGGGGTCTCCT . 96.0 43.0 79.0 0.0 . 131 . . . none . . PASS Atlas-SNP MBTPS1 8720 hgsc.bcm.edu hg19 16 84132688 84132688 + Missense_Mutation SNP T T G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . MBTPS1 NM_003791 exon3 c.A391C p.K131Q AGACTTTTCGTTG . 172.0 29.0 160.0 0.0 . 85 . . . none . . PASS Atlas-SNP PPM1E 22843 hgsc.bcm.edu hg19 17 56833454 56833454 + Silent SNP G G A rs77856248 TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d PPM1E,colon,carcinoma,0,1 PPM1E NM_014906 exon1 c.G96A p.E32E GCCGGAGCCGGAA . 298.0 34.0 206.0 0.0 . 97 . . . weak . . PASS Atlas-SNP PPM1E 22843 hgsc.bcm.edu hg19 17 56833457 56833457 + Silent SNP G G C rs74256772 TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d PPM1E,colon,carcinoma,0,1 PPM1E NM_014906 exon1 c.G99C p.P33P GGAGCCGGAACCC . 294.0 41.0 202.0 2.0 . 97 . . . weak . . PASS Atlas-SNP PPM1E 22843 hgsc.bcm.edu hg19 17 56833490 56833490 + Silent SNP G G A rs59676153 TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d PPM1E,colon,carcinoma,0,1 PPM1E NM_014906 exon1 c.G132A p.E44E ACCCGAGTCCGAG . 307.0 35.0 206.0 0.0 . 97 . . . weak . . PASS Atlas-SNP PPM1E 22843 hgsc.bcm.edu hg19 17 56833497 56833497 + Missense_Mutation SNP C C T rs61052860 TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d PPM1E,colon,carcinoma,0,1 PPM1E NM_014906 exon1 c.C139T p.P47S TCCGAGCCCGAGC . 317.0 16.0 204.0 0.0 . 97 . . . weak C|0.900;T|0.100 0.100 PASS Atlas-SNP MGAT5B 146664 hgsc.bcm.edu hg19 17 74943970 74943970 + Missense_Mutation SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . MGAT5B NM_198955 exon15 c.T2009C p.F670S GCCCCTTTGTCCT . 141.0 25.0 112.0 0.0 . 98 . . . none . . PASS Atlas-SNP LPIN2 9663 hgsc.bcm.edu hg19 18 2931299 2931299 + Missense_Mutation SNP G G C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . LPIN2 NM_014646 exon9 c.C1411G p.L471V GGGAGAGGGTAAC . 41.0 15.0 49.0 0.0 . 75 . . . none . . PASS Atlas-SNP EPB41L3 23136 hgsc.bcm.edu hg19 18 5395104 5395104 + Missense_Mutation SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . EPB41L3 NM_012307 exon21 c.A3115G p.I1039V TGACTATTCGCTT . 79.0 24.0 80.0 0.0 . 222 . . . none . . PASS Atlas-SNP PTPRM 5797 hgsc.bcm.edu hg19 18 8244180 8244180 + Missense_Mutation SNP A A G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PTPRM NM_001105244 exon15 c.A2425G p.M809V TCATTCATGGACA . 135.0 42.0 125.0 0.0 . 185 . . . none . . PASS Atlas-SNP PTPRM 5797 hgsc.bcm.edu hg19 18 8380303 8380303 + Nonsense_Mutation SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PTPRM NM_001105244 exon29 c.C3796T p.Q1266X TATAAACAGCCTT . 58.0 22.0 75.0 0.0 . 185 . . . none . . PASS Atlas-SNP KDSR 2531 hgsc.bcm.edu hg19 18 61018276 61018276 + Missense_Mutation SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . KDSR NM_002035 exon6 c.C454A p.P152T GGCTGGGGTACAC . 102.0 32.0 100.0 0.0 . 17 . . . none . . PASS Atlas-SNP JSRP1 126306 hgsc.bcm.edu hg19 19 2254452 2254452 + Missense_Mutation SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . JSRP1 NM_144616 exon3 c.G139A p.V47M GGGGCACGCTGCC . 110.0 36.0 103.0 0.0 . 18 . . . none . . PASS Atlas-SNP PRAM1 84106 hgsc.bcm.edu hg19 19 8563902 8563902 + Missense_Mutation SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PRAM1 NM_032152 exon2 c.C790A p.R264S AGTCGCGCTTCGG . 71.0 4.0 89.0 0.0 . 53 . . . none . . PASS Atlas-SNP ATG4D 84971 hgsc.bcm.edu hg19 19 10662945 10662945 + Missense_Mutation SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . ATG4D NM_032885 exon9 c.G1187A p.G396D CCGTGGGCTTCTA . 49.0 18.0 48.0 0.0 . 47 . . . none . . PASS Atlas-SNP DOCK6 57572 hgsc.bcm.edu hg19 19 11358812 11358812 + Missense_Mutation SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . DOCK6 NM_020812 exon7 c.C736T p.R246C TACAGCGTTCCAC . 51.0 17.0 44.0 0.0 . 104 . . . none . . PASS Atlas-SNP ZNF799 90576 hgsc.bcm.edu hg19 19 12502155 12502155 + Missense_Mutation SNP T T G rs201335235 TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . ZNF799 NM_001080821 exon4 c.A1057C p.K353Q GACTTTTCAGTGA . 77.0 6.0 98.0 0.0 . 111 . . . weak . . PASS Atlas-SNP COLGALT1 79709 hgsc.bcm.edu hg19 19 17670124 17670124 + Missense_Mutation SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . . NM_024656 exon2 c.G265A p.A89T AGGGTGGCTACGG . 88.0 25.0 81.0 0.0 . . . . . none . . PASS Atlas-SNP ZNF536 9745 hgsc.bcm.edu hg19 19 31039335 31039335 + Nonsense_Mutation SNP A A T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . ZNF536 NM_014717 exon4 c.A2809T p.K937X GACATGAAGGACA . 70.0 16.0 48.0 0.0 . 424 . . . none . . PASS Atlas-SNP GPATCH1 55094 hgsc.bcm.edu hg19 19 33597758 33597758 + Missense_Mutation SNP T T G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . GPATCH1 NM_018025 exon10 c.T1238G p.L413R ACCAACTGAATGC . 137.0 51.0 113.0 0.0 . 79 . . . none . . PASS Atlas-SNP ZNF790 388536 hgsc.bcm.edu hg19 19 37314679 37314679 + Missense_Mutation SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . ZNF790 NM_206894 exon3 c.G23A p.R8K ACATCCCTGAACA . 78.0 12.0 113.0 0.0 . 89 . . . none . . PASS Atlas-SNP PLD3 23646 hgsc.bcm.edu hg19 19 40883752 40883752 + Missense_Mutation SNP C C G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PLD3 NM_012268 exon12 c.C1245G p.N415K TGTCAACCACAAC . 117.0 39.0 125.0 0.0 . 71 . . . none . . PASS Atlas-SNP PAFAH1B3 5050 hgsc.bcm.edu hg19 19 42804227 42804227 + Silent SNP C C T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PAFAH1B3 NM_001145940 exon5 c.G303A p.V101V GGTGCCCACCCAG . 91.0 20.0 61.0 0.0 . 12 . . . none . . PASS Atlas-SNP MEGF8 1954 hgsc.bcm.edu hg19 19 42873075 42873075 + Missense_Mutation SNP G G A rs374088709 TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . MEGF8 NM_001271938 exon37 c.G6562A p.D2188N CACCACGACTGCA . 76.0 26.0 74.0 0.0 . 358 . . . weak . . PASS Atlas-SNP PTH2 113091 hgsc.bcm.edu hg19 19 49926468 49926468 + Splice_Site SNP C C A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PTH2 NM_178449 exon2 c.128+1G>T . CACCTACCTGAGG . 182.0 21.0 158.0 0.0 . 20 . . . none . . PASS Atlas-SNP SCAF1 58506 hgsc.bcm.edu hg19 19 50161046 50161046 + Missense_Mutation SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . SCAF1 NM_021228 exon10 c.G3647T p.R1216L AGGAGCGGGCGGT . 138.0 34.0 137.0 0.0 . 78 . . . none . . PASS Atlas-SNP PTOV1 53635 hgsc.bcm.edu hg19 19 50357983 50357983 + Silent SNP C C T rs149977568 TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d PTOV1,colon,carcinoma,0,1 PTOV1 NM_017432 exon3 c.C384T p.G128G CCAAGGCGAGAAC . 81.0 27.0 83.0 0.0 . 41 . . . weak C|1.000;T|0.000 0.000 PASS Atlas-SNP ZNF468 90333 hgsc.bcm.edu hg19 19 53344638 53344638 + Silent SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . ZNF468 NM_001008801 exon4 c.A909G p.E303E GTCACATTCTTCA . 57.0 17.0 64.0 0.0 . 46 . . . none . . PASS Atlas-SNP C20orf96 140680 hgsc.bcm.edu hg19 20 270903 270903 + Silent SNP A A T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . C20orf96 NM_153269 exon2 c.T66A p.V22V CACCGGAACCTGG . 133.0 47.0 93.0 0.0 . 28 . . . none . . PASS Atlas-SNP PI3 5266 hgsc.bcm.edu hg19 20 43804687 43804687 + Missense_Mutation SNP C C A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PI3 NM_002638 exon2 c.C265A p.P89T AATCCCCCTAACC . 152.0 64.0 120.0 0.0 . 21 . . . none . . PASS Atlas-SNP CASS4 57091 hgsc.bcm.edu hg19 20 55028020 55028020 + Missense_Mutation SNP G G C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . CASS4 NM_020356 exon5 c.G1788C p.E596D GGAAGAGACTGTG . 129.0 29.0 105.0 0.0 . 121 . . . none . . PASS Atlas-SNP CTCFL 140690 hgsc.bcm.edu hg19 20 56098318 56098318 + Missense_Mutation SNP T T C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . CTCFL NM_001269044 exon2 c.A560G p.E187G TTCTTCTCCTGCT . 104.0 46.0 99.0 0.0 . 97 . . . none . . PASS Atlas-SNP USP25 29761 hgsc.bcm.edu hg19 21 17250242 17250242 + Missense_Mutation SNP A A T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . USP25 NM_013396 exon23 c.A2927T p.E976V TGGAAGAAAAGGA . 175.0 43.0 189.0 0.0 . 156 . . . none . . PASS Atlas-SNP TRPM2 7226 hgsc.bcm.edu hg19 21 45789155 45789155 + Missense_Mutation SNP G G C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . TRPM2 NM_003307 exon5 c.G700C p.G234R AAGGAAGGCGAGC . 229.0 78.0 223.0 0.0 . 196 . . . none . . PASS Atlas-SNP PIWIL3 440822 hgsc.bcm.edu hg19 22 25158388 25158388 + Missense_Mutation SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . PIWIL3 NM_001008496 exon2 c.C79A p.P27T CTCTGGGTCCCCC . 79.0 27.0 50.0 0.0 . 115 . . . none . . PASS Atlas-SNP KCTD17 79734 hgsc.bcm.edu hg19 22 37458580 37458580 + Missense_Mutation SNP G G C novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . KCTD17 NM_024681 exon8 c.G840C p.E280D GCCAGAGGCACCC . 54.0 12.0 36.0 0.0 . 17 . . . none . . PASS Atlas-SNP KCTD17 79734 hgsc.bcm.edu hg19 22 37458581 37458581 + Missense_Mutation SNP G G T rs377601872 alternate_allele TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . KCTD17 NM_024681 exon8 c.G841T p.A281S CCAGAGGCACCCG . 54.0 11.0 36.0 0.0 . 17 . . . alt . . PASS Atlas-SNP TLR7 51284 hgsc.bcm.edu hg19 X 12905654 12905654 + Missense_Mutation SNP A A G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . TLR7 NM_016562 exon3 c.A2027G p.N676S CTCCAAATCTAAA . 95.0 52.0 81.0 0.0 . 125 . . . none . . PASS Atlas-SNP MAGED2 10916 hgsc.bcm.edu hg19 X 54841870 54841870 + Missense_Mutation SNP T T G novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . MAGED2 NM_201222 exon12 c.T1576G p.W526G GGACCCTGGGCCA . 165.0 104.0 192.0 0.0 . 74 . . . none . . PASS Atlas-SNP ABCD1 215 hgsc.bcm.edu hg19 X 153005611 153005611 + Silent SNP G G T novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . ABCD1 NM_000033 exon6 c.G1554T p.R518R GTTCCGGATCCTG . 42.0 26.0 39.0 0.0 . 59 . . . none . . PASS Atlas-SNP COX1 5742 hgsc.bcm.edu hg19 MT 5979 5979 + Missense_Mutation SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . . ENST00000361624 exon1 c.G76A p.A26T GCATGAGCTGGAG . 117.0 29.0 47.0 0.0 . . . . . none . . PASS Atlas-SNP ND5 0 hgsc.bcm.edu hg19 MT 13031 13031 + Nonsense_Mutation SNP G G A novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . . ENST00000361567 exon1 c.G695A p.W232X ACCCCTGACTCCC . 87.0 6.0 29.0 0.0 . . . . . none . . PASS Atlas-SNP COL4A3BP 10087 hgsc.bcm.edu hg19 5 74676981 74676981 + Frame_Shift_Del DEL A A - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . COL4A3BP NM_001130105 exon17 c.2048delG p.C683fs . . 73.0 22.0 83.0 0.0 . 72 . 0.30137 0 none . . PASS Atlas-Indel,Pindel NPTX1 4884 hgsc.bcm.edu hg19 17 78450218 78450227 + Frame_Shift_Del DEL CAGGTGCGCG CAGGTGCGCG - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 CAGGTGCGCG CAGGTGCGCG . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . NPTX1 NM_002522 exon1 c.21_30del p.7_10del . . 38.0 15.0 24.0 0.0 . 28 . 0.394737 0 none . . PASS Atlas-INDEL SLC16A8 23539 hgsc.bcm.edu hg19 22 38476908 38476913 + In_Frame_Del DEL ACTGGG ACTGGG - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 ACTGGG ACTGGG . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . SLC16A8 NM_013356 exon4 c.1133_1138del p.378_380del . . 68.0 10.0 87.0 0.0 . 13 . 0.147059 0 none . . PASS Atlas-Indel,Pindel SMEK2 57223 hgsc.bcm.edu hg19 2 55795473 55795473 + Frame_Shift_Del DEL T T - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . SMEK2 NM_001122964 exon13 c.1793delT p.I598fs . . 144.0 34.0 160.0 0.0 . 86 . 0.236111 0 none . . PASS Atlas-Indel,Pindel MSANTD4 84437 hgsc.bcm.edu hg19 11 105880566 105880567 + Frame_Shift_Ins INS - - TG novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . . NM_032424 exon3 c.734_735insCA p.M245fs . . 87.0 25.0 84.0 0.0 . . . 0.287356 0 none . . PASS Atlas-Indel,Pindel GABRG3 2567 hgsc.bcm.edu hg19 15 27773100 27773105 + In_Frame_Del DEL AGATGG AGATGG - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 AGATGG AGATGG . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . GABRG3 NM_033223 exon9 c.1083_1088del p.361_363del . . 53.0 12.0 64.0 0.0 . 115 . 0.226415 0 none . . PASS Atlas-Indel,Pindel SCAMP2 10066 hgsc.bcm.edu hg19 15 75140977 75141001 + Frame_Shift_Del DEL ATGTAGATCCCTATTTGACAAAAAA ATGTAGATCCCTATTTGACAAAAAA - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 ATGTAGATCCCTATTTGACAAAAAA ATGTAGATCCCTATTTGACAAAAAA . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . SCAMP2 NM_005697 exon7 c.675_699del p.225_233del . . 86.0 13.0 79.0 0.0 . 18 . 0.151163 0 none . . PASS Atlas-Indel,Pindel GOLGA4 2803 hgsc.bcm.edu hg19 3 37368460 37368460 + Frame_Shift_Del DEL C C - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . GOLGA4 NM_001172713 exon15 c.5148delA p.K1716fs . . 271.0 85.0 278.0 0.0 . 173 . 0.313653 0 none . . PASS Atlas-Indel,Pindel FASTKD1 79675 hgsc.bcm.edu hg19 2 170403017 170403017 + Frame_Shift_Del DEL T T - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . FASTKD1 NM_024622 exon8 c.1413delT p.N471fs . . 248.0 66.0 265.0 0.0 . 86 . 0.266129 0 none . . PASS Atlas-Indel,Pindel COL16A1 1307 hgsc.bcm.edu hg19 1 32149737 32149737 + Frame_Shift_Del DEL G G - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . COL16A1 NM_001856 exon32 c.2257delG p.E753fs . . 205.0 72.0 184.0 0.0 . 137 . 0.35122 0 none . . PASS Atlas-Indel,Pindel UNKL 64718 hgsc.bcm.edu hg19 16 1417847 1417848 + Frame_Shift_Del DEL AC AC - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 AC AC . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . UNKL NM_001193388 exon13 c.1598_1599del p.533_533del . . 193.0 65.0 151.0 0.0 . 46 . 0.336788 0 none . . PASS Atlas-Indel,Pindel WIPF2 147179 hgsc.bcm.edu hg19 17 38430244 38430244 + Frame_Shift_Del DEL T T - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . WIPF2 NM_133264 exon6 c.1172delC p.S391fs . . 130.0 57.0 113.0 0.0 . 55 . 0.438462 0 none . . PASS Atlas-Indel,Pindel PCDHGB5 56101 hgsc.bcm.edu hg19 5 140777735 140777740 + In_Frame_Del DEL TGCCAG TGCCAG - novel TCGA-UZ-A9PO-01A-11D-A382-10 TCGA-UZ-A9PO-10A-01D-A385-10 TGCCAG TGCCAG . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 72b12c65-5631-49f5-843b-4bc9f58ce902 41481a6b-9b6c-44cb-8db2-6b911dab119d . . NM_032099 exon1 c.40_45del p.14_15del . . 305.0 38.0 323.0 0.0 . . . 0.125 . none . . PASS Pindel