Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	TVarRat	NVarRat	dbSNP_Strength	dbSNP_AF	dbSNP_PopFreq	Confidence	Algorithm
CDK11A	728642	hgsc.bcm.edu	hg19	1	1634967	1634967	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	CDK11A	NM_024011	exon18	c.C2008G	p.R670G	GCTTGCGGAGGTT	.	81.0	13.0	61.0	0.0	.	38	.	.	.	none	.	.	PASS	Atlas-SNP
AJAP1	55966	hgsc.bcm.edu	hg19	1	4772481	4772481	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	AJAP1	NM_018836	exon2	c.G551T	p.G184V	CCTGGGGGCCCAC	.	112.0	10.0	94.0	0.0	.	68	.	.	.	none	.	.	PASS	Atlas-SNP
PHC2	1912	hgsc.bcm.edu	hg19	1	33841054	33841054	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	PHC2	NM_198040	exon1	c.C87A	p.C29X	GTTGTTGCAGCCA	.	72.0	8.0	51.0	0.0	.	78	.	.	.	none	.	.	PASS	Atlas-SNP
IPO13	9670	hgsc.bcm.edu	hg19	1	44423158	44423158	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	IPO13	NM_014652	exon7	c.G1477T	p.G493C	CTCATTGGCCTCA	.	107.0	5.0	67.0	0.0	.	86	.	.	.	none	.	.	PASS	Atlas-SNP
MOV10	4343	hgsc.bcm.edu	hg19	1	113232693	113232693	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	MOV10	NM_020963	exon5	c.G809A	p.R270Q	CCAATCGGATAGA	.	104.0	11.0	104.0	0.0	.	74	.	.	.	none	.	.	PASS	Atlas-SNP
C1orf54	79630	hgsc.bcm.edu	hg19	1	150246488	150246488	+	Splice_Site	SNP	A	A	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	C1orf54	NM_024579	exon2	c.47-2A>G	.	CCCCATAGGACAA	.	111.0	12.0	107.0	0.0	.	20	.	.	.	none	.	.	PASS	Atlas-SNP
DUSP27	92235	hgsc.bcm.edu	hg19	1	167097288	167097288	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	DUSP27	NM_001080426	exon5	c.A2920C	p.K974Q	GAGTCTAAATCCT	.	146.0	10.0	128.0	0.0	.	235	.	.	.	none	.	.	PASS	Atlas-SNP
NRBP1	29959	hgsc.bcm.edu	hg19	2	27663700	27663700	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	NRBP1	NM_013392	exon14	c.G1222C	p.G408R	GCCTTTGGGCTGC	.	56.0	9.0	60.0	0.0	.	40	.	.	.	none	.	.	PASS	Atlas-SNP
RANBP2	5903	hgsc.bcm.edu	hg19	2	109381490	109381490	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	RANBP2	NM_006267	exon20	c.T4495C	p.C1499R	ACAAAATGTGCTG	.	84.0	12.0	84.0	0.0	.	488	.	.	.	none	.	.	PASS	Atlas-SNP
WDR33	55339	hgsc.bcm.edu	hg19	2	128528415	128528415	+	Silent	SNP	T	T	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	WDR33	NM_001006623	exon2	c.A141T	p.R47R	TCTCATTCGTTTT	.	135.0	14.0	141.0	0.0	.	136	.	.	.	none	.	.	PASS	Atlas-SNP
TRAK2	66008	hgsc.bcm.edu	hg19	2	202265791	202265791	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	TRAK2	NM_015049	exon4	c.A313G	p.M105V	TGGTCATCTGCTC	.	95.0	7.0	95.0	0.0	.	62	.	.	.	none	.	.	PASS	Atlas-SNP
DUSP7	1849	hgsc.bcm.edu	hg19	3	52088120	52088120	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	DUSP7	NM_001947	exon2	c.T788C	p.L263P	ACGTCCAGGTTGG	.	163.0	18.0	122.0	0.0	.	34	.	.	.	none	.	.	PASS	Atlas-SNP
TMEM14E	645843	hgsc.bcm.edu	hg19	3	152058400	152058400	+	Silent	SNP	C	C	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	TMEM14E	NM_001123228	exon1	c.G294A	p.L98L	AACTATCAGCAGG	.	302.0	25.0	286.0	0.0	.	6	.	.	.	none	.	.	PASS	Atlas-SNP
DNAH5	1767	hgsc.bcm.edu	hg19	5	13917315	13917315	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	DNAH5	NM_001369	exon8	c.G1026T	p.K342N	ATTGTCCTTTGCT	.	66.0	5.0	68.0	0.0	.	868	.	.	.	none	.	.	PASS	Atlas-SNP
EGFLAM	133584	hgsc.bcm.edu	hg19	5	38370553	38370553	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	EGFLAM	NM_001205301	exon6	c.T701A	p.I234N	ACATCATCCGGAC	.	39.0	7.0	36.0	0.0	.	302	.	.	.	none	.	.	PASS	Atlas-SNP
CCDC90A	63933	hgsc.bcm.edu	hg19	6	13814461	13814461	+	Silent	SNP	T	T	C	rs371767736	bycluster	TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	CCDC90A	NM_001031713	exon1	c.A201G	p.S67S	CAGCGGTGAGGCA	.	9.0	5.0	3.0	0.0	.	15	.	.	.	weak	.	.	PASS	Atlas-SNP
SLC39A7	7922	hgsc.bcm.edu	hg19	6	33170059	33170059	+	Silent	SNP	T	T	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	SLC39A7	NM_006979	exon4	c.T654A	p.S218S	TCTGTCTGTGGGA	.	143.0	8.0	132.0	0.0	.	32	.	.	.	none	.	.	PASS	Atlas-SNP
GTPBP2	54676	hgsc.bcm.edu	hg19	6	43593600	43593600	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	GTPBP2	NM_019096	exon4	c.G400T	p.V134F	CCCCAACCCTGTC	.	69.0	8.0	53.0	0.0	.	39	.	.	.	none	.	.	PASS	Atlas-SNP
MEP1A	4224	hgsc.bcm.edu	hg19	6	46766863	46766863	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	MEP1A	NM_005588	exon5	c.A207T	p.R69S	CCTGAGAGACCCA	.	159.0	20.0	136.0	0.0	.	93	.	.	.	none	.	.	PASS	Atlas-SNP
HEATR2	54919	hgsc.bcm.edu	hg19	7	780577	780577	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	HEATR2	NM_017802	exon3	c.T902A	p.V301D	CTGAGGTCAGGTA	.	47.0	8.0	29.0	0.0	.	62	.	.	.	none	.	.	PASS	Atlas-SNP
PDE1C	5137	hgsc.bcm.edu	hg19	7	31862810	31862810	+	Missense_Mutation	SNP	C	C	A	rs372917246	bycluster;alternate_allele	TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	PDE1C	NM_001191058	exon15	c.G1639T	p.G547C	CTGAACCAGAGGT	.	121.0	28.0	108.0	0.0	.	465	.	.	.	alt	.	.	PASS	Atlas-SNP
PTPRZ1	5803	hgsc.bcm.edu	hg19	7	121682687	121682687	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	PTPRZ1	NM_002851	exon22	c.T5827G	p.Y1943D	GGCACATATATTG	.	183.0	26.0	166.0	0.0	.	605	.	.	.	none	.	.	PASS	Atlas-SNP
KAT6A	7994	hgsc.bcm.edu	hg19	8	41790172	41790172	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	.	NM_001099412	exon18	c.T5566C	p.S1856P	GGATGGAAATGTG	.	85.0	10.0	75.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
SLC30A8	169026	hgsc.bcm.edu	hg19	8	118169968	118169968	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	SLC30A8	NM_173851	exon4	c.G457A	p.V153M	ATCTGGGTGGTGA	.	112.0	14.0	144.0	0.0	.	102	.	.	.	none	.	.	PASS	Atlas-SNP
ALDOB	229	hgsc.bcm.edu	hg19	9	104187287	104187287	+	Silent	SNP	A	A	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	ALDOB	NM_000035	exon8	c.T837C	p.D279D	AGTGGCATCCTCT	.	136.0	10.0	130.0	0.0	.	69	.	.	.	none	.	.	PASS	Atlas-SNP
NUP188	23511	hgsc.bcm.edu	hg19	9	131761490	131761490	+	Silent	SNP	G	G	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	NUP188	NM_015354	exon33	c.G3555T	p.T1185T	CTTGACGGAGATC	.	82.0	4.0	75.0	0.0	.	140	.	.	.	none	.	.	PASS	Atlas-SNP
RXRA	6256	hgsc.bcm.edu	hg19	9	137313579	137313579	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	RXRA	NM_002957	exon6	c.G838A	p.V280M	ACCCTGGTGGAGT	.	70.0	7.0	80.0	0.0	.	52	.	.	.	none	.	.	PASS	Atlas-SNP
ZFAND4	93550	hgsc.bcm.edu	hg19	10	46113699	46113699	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	.	NM_001128324	exon9	c.C1937G	p.T646S	TGAGTAGTACATT	.	78.0	12.0	81.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
ARHGAP22	58504	hgsc.bcm.edu	hg19	10	49663122	49663122	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	ARHGAP22_ENST00000417912,NS,malignant_melanoma,0,2	ARHGAP22	NM_001256024	exon6	c.C763T	p.P255S	GCTCGGGGAGCTC	.	70.0	8.0	47.0	0.0	.	94	.	.	.	none	.	.	PASS	Atlas-SNP
PIDD	55367	hgsc.bcm.edu	hg19	11	801990	801990	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	PIDD_ENST00000347755,NS,carcinoma,0,1	PIDD	NM_145887	exon7	c.C1277G	p.T426S	AGGTAGGTCTCCA	.	79.0	6.0	63.0	0.0	.	76	.	.	.	none	.	.	PASS	Atlas-SNP
OR56A4	120793	hgsc.bcm.edu	hg19	11	6023641	6023641	+	Silent	SNP	G	G	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	OR56A4	NM_001005179	exon1	c.C738T	p.D246D	AGTGATGTCATCA	.	114.0	11.0	136.0	0.0	.	66	.	.	.	none	.	.	PASS	Atlas-SNP
TTC17	55761	hgsc.bcm.edu	hg19	11	43465612	43465612	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	TTC17	NM_018259	exon18	c.T2518C	p.F840L	ATTACATTCCAGG	.	262.0	31.0	234.0	0.0	.	112	.	.	.	none	.	.	PASS	Atlas-SNP
PRCP	5547	hgsc.bcm.edu	hg19	11	82535970	82535970	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	PRCP	NM_199418	exon10	c.A1532T	p.D511V	GCACTGTCATAGA	.	88.0	6.0	94.0	0.0	.	69	.	.	.	none	.	.	PASS	Atlas-SNP
FAT3	120114	hgsc.bcm.edu	hg19	11	92615968	92615968	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	FAT3	NM_001008781	exon23	c.G12346T	p.V4116L	GTGAACGTGTTCG	.	96.0	4.0	89.0	0.0	.	1822	.	.	.	none	.	.	PASS	Atlas-SNP
KIAA1731	85459	hgsc.bcm.edu	hg19	11	93432956	93432956	+	Silent	SNP	A	A	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	KIAA1731	NM_033395	exon15	c.A4878G	p.L1626L	GTCTTTAAACAAA	.	121.0	12.0	133.0	0.0	.	173	.	.	.	none	.	.	PASS	Atlas-SNP
AMOTL1	154810	hgsc.bcm.edu	hg19	11	94583286	94583286	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	AMOTL1	NM_130847	exon7	c.A1656C	p.E552D	CAAAGAATTCTTG	.	105.0	5.0	99.0	0.0	.	95	.	.	.	none	.	.	PASS	Atlas-SNP
VSIG2	23584	hgsc.bcm.edu	hg19	11	124620639	124620639	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	VSIG2	NM_014312	exon3	c.G398A	p.G133E	CCCAACCCATTGG	.	97.0	10.0	81.0	0.0	.	38	.	.	.	none	.	.	PASS	Atlas-SNP
GPR162	27239	hgsc.bcm.edu	hg19	12	6933876	6933876	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	GPR162	NM_019858	exon2	c.A812C	p.N271T	TCACCAACTTGGT	.	64.0	8.0	49.0	0.0	.	55	.	.	.	none	.	.	PASS	Atlas-SNP
TOX4	9878	hgsc.bcm.edu	hg19	14	21961062	21961062	+	Silent	SNP	T	T	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	TOX4,NS,carcinoma,0,2	TOX4	NM_014828	exon7	c.T1287A	p.A429A	AGCAGCTGCTGCT	.	78.0	5.0	64.0	0.0	.	50	.	.	.	none	.	.	PASS	Atlas-SNP
PCNX	22990	hgsc.bcm.edu	hg19	14	71493571	71493571	+	Silent	SNP	A	A	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	PCNX	NM_014982	exon15	c.A3438G	p.Q1146Q	TGAACAATTGGAT	.	77.0	6.0	72.0	0.0	.	198	.	.	.	none	.	.	PASS	Atlas-SNP
CA12	771	hgsc.bcm.edu	hg19	15	63673897	63673897	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	CA12	NM_206925	exon1	c.C23G	p.A8G	GCCGCCGCGTGCA	.	99.0	13.0	110.0	0.0	.	33	.	.	.	none	.	.	PASS	Atlas-SNP
HS3ST6	64711	hgsc.bcm.edu	hg19	16	1961626	1961626	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	HS3ST6	NM_001009606	exon2	c.T901C	p.Y301H	TCTGGTAGAACCT	.	76.0	15.0	62.0	0.0	.	26	.	.	.	none	.	.	PASS	Atlas-SNP
CHD9	80205	hgsc.bcm.edu	hg19	16	53326887	53326887	+	Silent	SNP	T	T	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	CHD9	NM_025134	exon29	c.T5433C	p.P1811P	GGTGCCTACCAGT	.	212.0	18.0	189.0	0.0	.	203	.	.	.	none	.	.	PASS	Atlas-SNP
USP10	9100	hgsc.bcm.edu	hg19	16	84796615	84796615	+	Silent	SNP	G	G	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	USP10	NM_001272075	exon10	c.G1587A	p.E529E	TGCTGAGGAATAC	.	49.0	7.0	47.0	0.0	.	51	.	.	.	none	.	.	PASS	Atlas-SNP
CTNS	1497	hgsc.bcm.edu	hg19	17	3563995	3563995	+	Silent	SNP	T	T	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	CTNS	NM_001031681	exon13	c.T1170C	p.T390T	CCAAACTACCAGC	.	175.0	18.0	169.0	0.0	.	42	.	.	.	none	.	.	PASS	Atlas-SNP
NCOR1	9611	hgsc.bcm.edu	hg19	17	15961807	15961807	+	Silent	SNP	A	A	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	NCOR1	NM_006311	exon38	c.T5988G	p.V1996V	CTTAACAACCTCT	.	92.0	8.0	78.0	0.0	.	240	.	.	.	none	.	.	PASS	Atlas-SNP
IKZF3	22806	hgsc.bcm.edu	hg19	17	37985676	37985676	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	IKZF3	NM_012481	exon3	c.G127T	p.G43X	CTTCTCCACTGTC	.	90.0	9.0	72.0	0.0	.	79	.	.	.	none	.	.	PASS	Atlas-SNP
NGFR	4804	hgsc.bcm.edu	hg19	17	47590364	47590364	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	NGFR	NM_002507	exon6	c.C1277T	p.P426L	CATCCCCGGTGTG	.	64.0	6.0	45.0	0.0	.	46	.	.	.	none	.	.	PASS	Atlas-SNP
CLTC	1213	hgsc.bcm.edu	hg19	17	57754324	57754324	+	Silent	SNP	G	G	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	CLTC	NM_004859	exon17	c.G2571C	p.L857L	GAAACTGCTTCTG	.	107.0	24.0	108.0	0.0	.	124	.	.	.	none	.	.	PASS	Atlas-SNP
HELZ	9931	hgsc.bcm.edu	hg19	17	65147177	65147177	+	Silent	SNP	A	A	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	HELZ	NM_014877	exon18	c.T2341C	p.L781L	GGTCCAACTGACA	.	186.0	30.0	191.0	0.0	.	160	.	.	.	none	.	.	PASS	Atlas-SNP
CEP192	55125	hgsc.bcm.edu	hg19	18	13068196	13068196	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	CEP192	NM_032142	exon23	c.C4718T	p.S1573F	GCCCTTCTGTGGT	.	90.0	8.0	86.0	0.0	.	340	.	.	.	none	.	.	PASS	Atlas-SNP
LPPR3	0	hgsc.bcm.edu	hg19	19	815758	815758	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	.	NM_001270366	exon3	c.C169A	p.R57S	GAGTGCGGTCATA	.	119.0	5.0	94.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
FCGBP	8857	hgsc.bcm.edu	hg19	19	40366139	40366139	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	FCGBP	NM_003890	exon30	c.T14095A	p.C4699S	CTTGGCAGGCGTC	.	195.0	15.0	195.0	0.0	.	416	.	.	.	none	.	.	PASS	Atlas-SNP
MEGF8	1954	hgsc.bcm.edu	hg19	19	42848184	42848184	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	MEGF8	NM_001271938	exon10	c.G1747C	p.A583P	CAAGGAGCCTGCC	.	57.0	7.0	51.0	0.0	.	358	.	.	.	none	.	.	PASS	Atlas-SNP
LMTK3	114783	hgsc.bcm.edu	hg19	19	49002400	49002400	+	Silent	SNP	C	C	T	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	LMTK3	NM_001080434	exon12	c.G2013A	p.E671E	CTCCTCCTCTTCT	.	75.0	5.0	82.0	0.0	.	125	.	.	.	none	.	.	PASS	Atlas-SNP
ZNF606	80095	hgsc.bcm.edu	hg19	19	58490071	58490071	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	ZNF606	NM_025027	exon7	c.A1977C	p.K659N	GAAGGATTTTCCA	.	103.0	7.0	98.0	0.0	.	155	.	.	.	none	.	.	PASS	Atlas-SNP
ZNF831	128611	hgsc.bcm.edu	hg19	20	57767752	57767752	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	ZNF831	NM_178457	exon1	c.G1678A	p.A560T	CCCCGGGCCCTGG	.	125.0	9.0	84.0	0.0	.	287	.	.	.	none	.	.	PASS	Atlas-SNP
TUBGCP6	85378	hgsc.bcm.edu	hg19	22	50659180	50659180	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	TUBGCP6	NM_020461	exon16	c.C3608T	p.S1203L	ATGTCTGACACAG	.	58.0	6.0	50.0	0.0	.	132	.	.	.	none	.	.	PASS	Atlas-SNP
COX1	5742	hgsc.bcm.edu	hg19	MT	6285	6285	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	.	ENST00000361624	exon1	c.G382A	p.V128I	TGAACAGTCTACC	.	32.0	18.0	36.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
ADAM7	8756	hgsc.bcm.edu	hg19	8	24350057	24350058	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	ADAM7	NM_003817	exon15	c.1602_1603insA	p.N534fs	.	.	472.0	40.0	386.0	0.0	.	165	.	0.0847458	0	none	.	.	PASS	Atlas-Indel,Pindel
HTR2B	3357	hgsc.bcm.edu	hg19	2	231973805	231973805	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	HTR2B	NM_000867	exon4	c.873delG	p.K291fs	.	.	172.0	12.0	156.0	0.0	.	33	.	0.0697674	0	none	.	.	PASS	Atlas-Indel,Pindel
PRSS21	10942	hgsc.bcm.edu	hg19	16	2868817	2868817	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	PRSS21,rectum,carcinoma,0,1	PRSS21	NM_144957	exon4	c.396delG	p.G132fs	.	.	86.0	10.0	67.0	0.0	.	32	.	0.116279	0	none	.	.	PASS	Atlas-INDEL
KRTAP4-5	85289	hgsc.bcm.edu	hg19	17	39305776	39305777	+	In_Frame_Ins	INS	-	-	GCAGCAGCTGGGGCG	rs146438235	alternate_allele	TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	KRTAP4-5	NM_033188	exon1	c.244_245insCGCCCCAGCTGCTGC	p.Q82delinsRPSCCQ	.	.	52.0	31.0	45.0	0.0	.	34	.	0.596154	0	alt	.	.	PASS	Atlas-INDEL
ZNF235	9310	hgsc.bcm.edu	hg19	19	44792736	44792737	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	ZNF235	NM_004234	exon5	c.852_853insC	p.V284fs	.	.	178.0	20.0	176.0	0.0	.	60	.	0.11236	0	none	.	.	PASS	Atlas-Indel,Pindel
MIR548F5	100302239	hgsc.bcm.edu	hg19	13	36051205	36051205	+	RNA	DEL	A	A	-	novel		TCGA-2K-A9WE-01A-11D-A382-10	TCGA-2K-A9WE-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	85477ef3-5aed-4159-ab85-169a86151ec5	1b9c4eb6-95e2-490d-9d51-2d9ffc29a8ad	.	.	.	.	.	.	.	.	110.0	12.0	102.0	0.0	.	.	.	0.109091	0	none	.	.	PASS	Atlas-INDEL