Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCC12 94160 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 48173117 48173117 + Missense_Mutation SNP G G A rs141109408 byfrequency;alternate_allele TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb ACAD11 84129 broad.mit.edu;hgsc.bcm.edu 37 3 132323956 132323956 + Missense_Mutation SNP C C G novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb AGFG2 3268 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 100160277 100160277 + Silent SNP C C T rs146791629 TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb ALPK2 115701 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 56202373 56202373 + Silent SNP T T C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb BCAR1 9564 broad.mit.edu;hgsc.bcm.edu 37 16 75269312 75269312 + Missense_Mutation SNP C C A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb BCL7A 605 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 122492742 122492742 + Silent SNP G G C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb BIRC6 57448 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 32689778 32689778 + Missense_Mutation SNP G G T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G G T G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb C13orf23 0 hgsc.bcm.edu;ucsc.edu 37 13 39587067 39587067 + Frame_Shift_Del DEL G G - novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb C22orf9 0 hgsc.bcm.edu 37 22 45601731 45601731 + Silent SNP C C A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb CALHM1 255022 hgsc.bcm.edu 37 10 105218252 105218259 + Frame_Shift_Del DEL AGCGGCCG AGCGGCCG - novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 AGCGGCCG AGCGGCCG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb CCDC89 220388 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 85396828 85396828 + Missense_Mutation SNP C C T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb CDK17 5128 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 96683053 96683053 + Missense_Mutation SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb CES5A 221223 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 55907817 55907817 + Missense_Mutation SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb CHSY1 22856 hgsc.bcm.edu 37 15 101717654 101717655 + Frame_Shift_Ins INS - - C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb CLINT1 9685 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 157232998 157232998 + Missense_Mutation SNP G G T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb DDX25 29118 broad.mit.edu 37 11 125786947 125786947 + Missense_Mutation SNP C T T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb DNAH9 1770 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 11757612 11757612 + Missense_Mutation SNP C C A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb DSCR10 259234 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 39580489 39580489 + RNA SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb FAM122C 159091 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 133941717 133941717 + Missense_Mutation SNP C C A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb FBXL21 26223 hgsc.bcm.edu 37 5 135276202 135276204 + In_Frame_Del DEL GTT GTT - rs1160982 bycluster;byfrequency;by1000genomes TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 GTT GTT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb FCRL5 83416 hgsc.bcm.edu 37 1 157485438 157485438 + Frame_Shift_Del DEL A A - novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb GALK2 2585 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 49611861 49611861 + Missense_Mutation SNP T T C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb GRIN3B 116444 hgsc.bcm.edu 37 19 1007860 1007861 + Frame_Shift_Ins INS - - C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb GRLF1 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 47424189 47424189 + Nonsense_Mutation SNP C C T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb GSPT2 23708 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 51488138 51488138 + Silent SNP T T A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb HJURP 55355 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 234749963 234749963 + Missense_Mutation SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb HOMEZ 57594 hgsc.bcm.edu 37 14 23745517 23745518 + Frame_Shift_Ins INS - - G novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb HSPG2 3339 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 22168731 22168731 + Splice_Site SNP C C T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb IL17RA 23765 hgsc.bcm.edu 37 22 17589955 17589955 + Missense_Mutation SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb IWS1 55677 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 128252517 128252517 + Missense_Mutation SNP A A C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb KDM5C 8242 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 53228213 53228213 + Missense_Mutation SNP C C A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb KIAA0802 0 broad.mit.edu 37 18 8786001 8786001 + Missense_Mutation SNP G T T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb KIF1B 23095 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 10363881 10363881 + Missense_Mutation SNP G G T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb L1TD1 54596 hgsc.bcm.edu 37 1 62676248 62676251 + Frame_Shift_Del DEL AACT AACT - novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 AACT AACT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb LAMB2 3913 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 49160288 49160288 + Silent SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb LOC651250 0 broad.mit.edu 37 17 66123801 66123801 + RNA SNP C A A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb LRRK2 120892 hgsc.bcm.edu;ucsc.edu 37 12 40702937 40702937 + Missense_Mutation SNP C C A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb MALAT1 378938 broad.mit.edu;hgsc.bcm.edu 37 11 65273309 65273309 + RNA SNP A A G novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb MST1P9 0 broad.mit.edu 37 1 17085795 17085795 + Silent SNP G T T rs1057379 bycluster TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb MTHFR 4524 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 11855302 11855302 + Missense_Mutation SNP C C A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb MUC16 94025 broad.mit.edu 37 19 9067792 9067792 + Missense_Mutation SNP T C C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 T T T C T T Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb MYL9 10398 broad.mit.edu 37 20 35177531 35177531 + Missense_Mutation SNP G A A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb NTSR1 4923 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 61341142 61341142 + Missense_Mutation SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb OR10W1 81341 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 58034733 58034733 + Missense_Mutation SNP C C T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb OR5I1 10798 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 55703464 55703464 + Missense_Mutation SNP A A C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb PAX3 5077 broad.mit.edu;hgsc.bcm.edu 37 2 223066808 223066808 + Silent SNP C C A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52595787 52595787 + Nonsense_Mutation SNP A A C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 A A A C A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb PGPEP1L 145814 hgsc.bcm.edu 37 15 99511804 99511805 + Frame_Shift_Ins INS - - C rs5814919 bycluster;by1000genomes TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb PPFIA1 8500 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 70218604 70218604 + Silent SNP T T C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb PRDM13 59336 broad.mit.edu 37 6 100057184 100057184 + Splice_Site SNP G A A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb RBFOX1 54715 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 7568337 7568337 + Missense_Mutation SNP C C A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb SDK2 54549 broad.mit.edu;hgsc.bcm.edu 37 17 71344797 71344797 + Missense_Mutation SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb SELE 6401 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 169697008 169697008 + Missense_Mutation SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb SETD2 29072 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 47125380 47125380 + Nonsense_Mutation SNP C C A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb SLC23A3 151295 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 220033819 220033819 + Missense_Mutation SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb SLC9A4 389015 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 103120167 103120167 + Splice_Site SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb SSPO 23145 broad.mit.edu 37 7 149482073 149482073 + Missense_Mutation SNP G T T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb TNK1 8711 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 7291994 7291994 + Missense_Mutation SNP G G T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb TPST1 8460 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 65705680 65705680 + Missense_Mutation SNP G G T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb TPX2 22974 broad.mit.edu;ucsc.edu 37 20 30365398 30365398 + Missense_Mutation SNP A C C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb UBE2O 63893 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 74392798 74392798 + Silent SNP G G A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb USP31 57478 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 23079995 23079995 + Missense_Mutation SNP G G T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb VHL 7428 broad.mit.edu;ucsc.edu 37 3 10188200 10188200 + Missense_Mutation SNP C T T rs5030811 bycluster TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb VWF 7450 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 6219564 6219564 + Missense_Mutation SNP C C T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb YIF1B 90522 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 38799931 38799931 + Missense_Mutation SNP T T A novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb ZCCHC3 85364 broad.mit.edu 37 20 278688 278690 + In_Frame_Del DEL CGG - - rs5839847 bycluster;by1000genomes TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 CGG CGG . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb ZMYM4 9202 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 35857906 35857906 + Missense_Mutation SNP G G C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G G C G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb ZNF3 7551 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 99668973 99668973 + Silent SNP G G C novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb ZNF572 137209 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 125989952 125989952 + Missense_Mutation SNP C C G novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb ZNF783 100289678 broad.mit.edu;hgsc.bcm.edu 37 7 148979329 148979329 + Silent SNP C C T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb AIM1 202 ucsc.edu 37 6 106960877 106960877 + Missense_Mutation SNP G G T novel TCGA-BP-5169-01A-01D-1429-08 TCGA-BP-5169-11A-01D-1429-08 G G G T G G Unknown Valid Somatic . WXS 454 . . Illumina HiSeq 3527b21e-972b-4c31-b5de-8c394ce0e500 5ea7625d-1eb6-45d7-add0-a91070f4ebcb