Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCC1 4363 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 16149977 16149977 + Missense_Mutation SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ABCG5 64240 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 44065039 44065039 + Missense_Mutation SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ACAD10 80724 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 112167663 112167663 + Nonsense_Mutation SNP G G T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ACO1 48 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 32425989 32425989 + Missense_Mutation SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ADAMTS13 11093 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 136290722 136290722 + Missense_Mutation SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ARHGAP6 395 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 11204520 11204520 + Missense_Mutation SNP A A T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ASB1 51665 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 239353054 239353054 + Missense_Mutation SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ATF7IP 55729 hgsc.bcm.edu;ucsc.edu 37 12 14650805 14650805 + Frame_Shift_Del DEL A A - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 B3GNT6 192134 broad.mit.edu;hgsc.bcm.edu 37 11 76751055 76751055 + Missense_Mutation SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 BLMH 642 hgsc.bcm.edu;ucsc.edu 37 17 28599644 28599655 + Frame_Shift_Del DEL AGCCTAGAAACA AGCCTAGAAACA - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 AGCCTAGAAACA AGCCTAGAAACA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 BMP6 654 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 7727745 7727745 + Missense_Mutation SNP G G T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 BSDC1 55108 hgsc.bcm.edu;ucsc.edu 37 1 32842305 32842306 + Frame_Shift_Del DEL CT CT - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 CT CT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 C16orf3 750 hgsc.bcm.edu 37 16 90095582 90095582 + Missense_Mutation SNP T T C rs62640380 byfrequency TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 C1orf128 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 24106410 24106410 + Nonsense_Mutation SNP C C G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 C6orf58 352999 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 127901450 127901450 + Silent SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 C9orf84 158401 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 114518734 114518734 + Nonsense_Mutation SNP C C A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CACYBP 27101 hgsc.bcm.edu;ucsc.edu 37 1 174977836 174977836 + Frame_Shift_Del DEL A A - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CADM2 253559 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 85851226 85851226 + Missense_Mutation SNP A A G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CAPZA2 830 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 116538867 116538867 + Missense_Mutation SNP A A G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CCDC76 0 hgsc.bcm.edu;ucsc.edu 37 1 100613814 100613814 + Frame_Shift_Del DEL T T - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CCNDBP1 23582 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 43482264 43482264 + Silent SNP A A C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CHI3L1 1116 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 203155750 203155750 + Missense_Mutation SNP A A G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CLEC12A 160364 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 10132016 10132016 + Missense_Mutation SNP T T C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CLEC12A 160364 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 10132045 10132045 + Missense_Mutation SNP A A T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CLIP1 6249 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 122826194 122826194 + Silent SNP T T G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 COL4A1 1282 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 110835582 110835582 + Missense_Mutation SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 COLEC10 10584 broad.mit.edu;hgsc.bcm.edu 37 8 120101991 120101991 + Splice_Site SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CPNE1 8904 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 34219486 34219486 + Silent SNP A A G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CPXM1 56265 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 2775211 2775211 + Silent SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CSF2RA 1438 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 1422842 1422842 + Missense_Mutation SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CSMD1 64478 hgsc.bcm.edu;ucsc.edu 37 8 3141831 3141831 + Frame_Shift_Del DEL C C - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CSMD3 114788 broad.mit.edu;hgsc.bcm.edu 37 8 113421242 113421242 + Silent SNP T T C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 DFNA5 1687 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 24738852 24738852 + Silent SNP T T C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 DHRS4L2 317749 broad.mit.edu;hgsc.bcm.edu 37 14 24459472 24459472 + Silent SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 DRD3 1814 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 113858392 113858392 + Silent SNP T T A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 EDC4 23644 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 67912713 67912713 + Missense_Mutation SNP T T C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 EPS8L2 64787 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 710481 710481 + Missense_Mutation SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 FAM101A 144347 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 124798830 124798830 + Missense_Mutation SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 FASTKD2 22868 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 207639092 207639092 + Silent SNP C C A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 FLJ43860 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 142445230 142445230 + Missense_Mutation SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 FPGS 2356 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 130575544 130575544 + Missense_Mutation SNP C C G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 FYB 2533 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 39202847 39202847 + Silent SNP T T C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 GDAP1L1 78997 hgsc.bcm.edu 37 20 42876070 42876070 + Missense_Mutation SNP C C G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 GRAMD1C 54762 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 113627861 113627861 + Frame_Shift_Del DEL A A - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 GTF3C1 2975 hgsc.bcm.edu;ucsc.edu 37 16 27500985 27500986 + Frame_Shift_Ins INS - - T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 H3F3C 440093 broad.mit.edu;hgsc.bcm.edu 37 12 31944927 31944927 + Silent SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 HMCN1 83872 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 186151399 186151399 + Missense_Mutation SNP A A T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A A T A A Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 HPS6 79803 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 103827518 103827518 + Missense_Mutation SNP G G T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 IDE 3416 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 94297189 94297189 + Missense_Mutation SNP T T A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 IDI2 91734 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 1066837 1066837 + Missense_Mutation SNP C C G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ITSN2 50618 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 24535240 24535240 + Silent SNP A A G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 KHK 3795 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 27320383 27320383 + Missense_Mutation SNP T T C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 KIAA1543 0 hgsc.bcm.edu 37 19 7675454 7675455 + Frame_Shift_Ins INS - - G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 LACTB 114294 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 63419762 63419762 + Silent SNP C C A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 LAMC3 10319 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 133914405 133914405 + Silent SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 LARP1 23367 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 154191178 154191185 + Frame_Shift_Del DEL GTCTTGAA GTCTTGAA - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 GTCTTGAA GTCTTGAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 LPCAT3 10162 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 7086391 7086391 + Missense_Mutation SNP A A T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 LRRC8B 23507 broad.mit.edu;ucsc.edu 37 1 90048980 90048980 + Silent SNP A G G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 LRRIQ4 344657 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 169555371 169555371 + Silent SNP A A G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MAML1 9794 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 179193308 179193308 + Missense_Mutation SNP A A T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MFAP3L 9848 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 170913100 170913100 + Missense_Mutation SNP G G T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MLL 4297 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 118352713 118352713 + Silent SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MMP11 4320 hgsc.bcm.edu;ucsc.edu 37 22 24121517 24121517 + Frame_Shift_Del DEL C C - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MSL1 339287 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 38285875 38285875 + Missense_Mutation SNP T T A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MUC6 4588 broad.mit.edu;hgsc.bcm.edu 37 11 1017614 1017614 + Silent SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MYBPC1 4604 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 102067221 102067221 + Missense_Mutation SNP A A T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MYO5C 55930 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 52521378 52521378 + Silent SNP A A T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A A T A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 NCAPH 23397 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 97024901 97024901 + Missense_Mutation SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 NCOA2 10499 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 71050557 71050557 + Silent SNP T T C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 NFIX 4784 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 13192531 13192531 + Silent SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 NID2 22795 broad.mit.edu;hgsc.bcm.edu 37 14 52534720 52534720 + Silent SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 NKX2-2 4821 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 21494259 21494259 + Missense_Mutation SNP C C G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 NPNT 255743 broad.mit.edu;ucsc.edu 37 4 106861265 106861265 + Missense_Mutation SNP G T T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G G T G G Unknown Valid Somatic Phase_I WXS PGM Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 NXPH3 11248 hgsc.bcm.edu;ucsc.edu 37 17 47656509 47656509 + Frame_Shift_Del DEL C C - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 OBSCN 84033 broad.mit.edu;hgsc.bcm.edu 37 1 228559759 228559759 + Silent SNP T T C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 OBSCN 84033 hgsc.bcm.edu 37 1 228505318 228505318 + Missense_Mutation SNP G G T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 OR1B1 347169 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 125391234 125391234 + Missense_Mutation SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 OR51A2 401667 broad.mit.edu;hgsc.bcm.edu 37 11 4976107 4976107 + Missense_Mutation SNP A A C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 OR8G2 26492 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 124095984 124095984 + Missense_Mutation SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 OTUD4 54726 hgsc.bcm.edu 37 4 146076739 146076739 + Frame_Shift_Del DEL A A - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 OTUD6B 51633 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 92083453 92083453 + Missense_Mutation SNP A A C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PACS2 23241 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 105843253 105843253 + Missense_Mutation SNP C C G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PBRM1 55193 hgsc.bcm.edu 37 3 52623267 52623267 + Silent SNP A A G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A A G A A Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PBRM1 55193 hgsc.bcm.edu;ucsc.edu 37 3 52623262 52623262 + Frame_Shift_Del DEL T T - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T T - T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PCDHB13 56123 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 140596070 140596070 + Missense_Mutation SNP A A G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PDE4DIP 9659 hgsc.bcm.edu 37 1 145039594 145039594 + Missense_Mutation SNP T T C rs111958438 TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PEX1 5189 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 92132412 92132414 + In_Frame_Del DEL AAC AAC - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 AAC AAC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PLAT 5327 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 42036456 42036456 + Missense_Mutation SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 POLE3 54107 broad.mit.edu;hgsc.bcm.edu 37 9 116171064 116171064 + RNA SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PPP1R10 5514 broad.mit.edu;hgsc.bcm.edu 37 6 30569885 30569885 + Silent SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PTPN13 5783 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 87679432 87679432 + Nonsense_Mutation SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PTPRN2 5799 broad.mit.edu;hgsc.bcm.edu 37 7 157985188 157985188 + Splice_Site SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 PVRL3 25945 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 110837735 110837735 + Silent SNP T T A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 RAB2B 84932 broad.mit.edu;hgsc.bcm.edu 37 14 21944786 21944786 + RNA SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 RABGGTA 5875 hgsc.bcm.edu;ucsc.edu 37 14 24740082 24740084 + In_Frame_Del DEL CAG CAG - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 CAG CAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 RBAK 57786 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 5104366 5104366 + Missense_Mutation SNP A A G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 RPH3A 22895 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 113285641 113285641 + Missense_Mutation SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 RRM2 6241 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 10269379 10269379 + Missense_Mutation SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SACS 26278 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 23909182 23909182 + Missense_Mutation SNP G G T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SCRIB 23513 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 144874929 144874929 + Missense_Mutation SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SETD4 54093 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 37418054 37418054 + Missense_Mutation SNP A A T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SKIV2L2 23517 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 54701366 54701366 + Silent SNP T T A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SLC16A14 151473 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 230910577 230910577 + Frame_Shift_Del DEL A A - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SON 6651 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 34925507 34925507 + Missense_Mutation SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SRSF2IP 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 46322466 46322466 + Missense_Mutation SNP T T A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SUOX 6821 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 56396036 56396036 + Missense_Mutation SNP A A G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SUZ12 23512 hgsc.bcm.edu 37 17 30310087 30310088 + Frame_Shift_Ins INS - - A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SYNE1 23345 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 152757208 152757208 + Missense_Mutation SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 TACR2 6865 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 71166878 71166878 + Silent SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 TAF1A 9015 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 222750908 222750908 + Missense_Mutation SNP C C G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 THAP5 168451 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 108205177 108205177 + Missense_Mutation SNP G G T rs192004311 by1000genomes;alternate_allele TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 TMEM179B 374395 broad.mit.edu;ucsc.edu 37 11 62557433 62557433 + Missense_Mutation SNP A G G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 TMEM67 91147 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 94821184 94821184 + Silent SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 TMPRSS11D 9407 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 68692994 68692994 + Missense_Mutation SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 TOP1MT 116447 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 144411529 144411529 + Silent SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 TRHDE 29953 broad.mit.edu;ucsc.edu 37 12 72956769 72956769 + Missense_Mutation SNP T A A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 TTC37 9652 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 94860289 94860289 + Missense_Mutation SNP C C G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 TUBGCP3 10426 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 113242269 113242269 + Missense_Mutation SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 USP9X 8239 broad.mit.edu;hgsc.bcm.edu 37 X 41088595 41088595 + Missense_Mutation SNP C C A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 VNN2 8875 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 133065439 133065439 + Silent SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 VRK3 51231 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 50512604 50512604 + Missense_Mutation SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 WDR19 57728 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 39206807 39206807 + Missense_Mutation SNP T T A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 WDR81 124997 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 1634217 1634217 + Missense_Mutation SNP A A T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ZCCHC3 85364 hgsc.bcm.edu 37 20 278733 278733 + Missense_Mutation SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ZCCHC3 85364 hgsc.bcm.edu 37 20 278734 278734 + Silent SNP C C T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ZDHHC16 84287 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 99213291 99213291 + Missense_Mutation SNP G G T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ZDHHC16 84287 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 99213292 99213292 + Missense_Mutation SNP C C A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ZNF561 93134 broad.mit.edu;hgsc.bcm.edu 37 19 9724746 9724746 + Missense_Mutation SNP G G A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ZNF677 342926 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 53740381 53740381 + Missense_Mutation SNP G G C novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ADCK5 203054 broad.mit.edu 37 8 145617535 145617549 + Splice_Site DEL GGGGGTGCAAGGTGA - - rs11270020 TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 GGGGGTGCAAGGTGA GGGGGTGCAAGGTGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 C9orf98 0 broad.mit.edu 37 9 135702270 135702270 + Missense_Mutation SNP T G G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CASKIN1 57524 broad.mit.edu 37 16 2230531 2230532 + Frame_Shift_Ins INS - G G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 CNRIP1 25927 broad.mit.edu 37 2 68546472 68546472 + Missense_Mutation SNP C A A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 FLJ10661 0 broad.mit.edu 37 8 8096026 8096026 + RNA SNP T G G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 LMBR1L 55716 broad.mit.edu 37 12 49496928 49496928 + Missense_Mutation SNP A G G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 LOC645166 645166 broad.mit.edu 37 1 148933289 148933289 + Splice_Site SNP A G G rs9729175 bycluster;by2hit2allele TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MAP1S 55201 broad.mit.edu 37 19 17838751 17838751 + Missense_Mutation SNP C A A rs138807804 alternate_allele TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MLXIPL 51085 broad.mit.edu 37 7 73011708 73011708 + Frame_Shift_Del DEL G - - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 MYCBP 26292 broad.mit.edu 37 1 39338699 39338700 + Frame_Shift_Del DEL GC - - novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 GC GC . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 NOXA1 10811 broad.mit.edu 37 9 140323753 140323754 + Frame_Shift_Ins INS - G G novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 SCRT2 85508 broad.mit.edu 37 20 656174 656174 + Silent SNP G A A novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262 ZNF492 57615 broad.mit.edu 37 19 22847963 22847963 + Missense_Mutation SNP A T T novel TCGA-BP-5168-01A-01D-1421-08 TCGA-BP-5168-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9930560d-22e6-43aa-a6f0-02515f7af8f0 e250a536-2616-4483-8fd8-ceb70790d262